BLASTX nr result
ID: Rehmannia25_contig00022770
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00022770
(868 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS61302.1| hypothetical protein M569_13492 [Genlisea aurea] 316 6e-84
ref|XP_006345106.1| PREDICTED: pentatricopeptide repeat-containi... 300 5e-79
ref|XP_004236066.1| PREDICTED: pentatricopeptide repeat-containi... 298 2e-78
emb|CBI15328.3| unnamed protein product [Vitis vinifera] 275 2e-71
ref|XP_006477702.1| PREDICTED: pentatricopeptide repeat-containi... 272 1e-70
ref|XP_006440794.1| hypothetical protein CICLE_v10019809mg [Citr... 271 2e-70
ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containi... 271 3e-70
ref|XP_002514631.1| pentatricopeptide repeat-containing protein,... 268 1e-69
ref|XP_006372539.1| hypothetical protein POPTR_0017s02600g [Popu... 266 7e-69
ref|XP_002302931.1| predicted protein [Populus trichocarpa] 266 7e-69
ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containi... 265 1e-68
gb|ESW16823.1| hypothetical protein PHAVU_007G187600g [Phaseolus... 264 3e-68
ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containi... 263 8e-68
gb|EOY22114.1| Pentatricopeptide repeat-containing protein, puta... 262 1e-67
ref|XP_003630353.1| Pentatricopeptide repeat-containing protein ... 260 5e-67
gb|AFK45023.1| unknown [Medicago truncatula] 260 5e-67
ref|NP_200904.1| pentatricopeptide repeat-containing protein [Ar... 251 2e-64
ref|XP_006282075.1| hypothetical protein CARUB_v10028321mg [Caps... 251 2e-64
ref|XP_002866406.1| pentatricopeptide repeat-containing protein ... 249 7e-64
ref|XP_004503897.1| PREDICTED: pentatricopeptide repeat-containi... 249 9e-64
>gb|EPS61302.1| hypothetical protein M569_13492 [Genlisea aurea]
Length = 536
Score = 316 bits (810), Expect = 6e-84
Identities = 159/266 (59%), Positives = 194/266 (72%), Gaps = 9/266 (3%)
Frame = -3
Query: 773 PPLHRPEFLPYAAFTR-------AHFLRFSIRHFSSETDNTDASSDNENPEKIGEEEKSI 615
P P LP + R + F S+R FSS TD D + EEE ++
Sbjct: 30 PAFRSPLLLPKTPYLRNGPDLYGSQFRGLSVRFFSSRTDEDDDGA-RSTARASEEEEGAL 88
Query: 614 AELFSNELQKNP--DAEPLPLPKRLDLSFSHITVTPTLLLATLSISPDAGRMALDFLKWA 441
A+L S+EL+KN + E LPL KRLDLSFSH+TVTP LLLATL+ISPDAGR LDFL WA
Sbjct: 89 AKLISDELRKNRQGEGEVLPLAKRLDLSFSHVTVTPALLLATLNISPDAGRTVLDFLTWA 148
Query: 440 KSRPDFQPTDEVYSYFVDYFGRRKDFKATHEILVDGHGVTGIKSLEALVDRLVRAGRPTH 261
KSRP F PTDEV+SY+V+YFGRRKDFKA HE+L D G+K EA+VDRLVRAGRP
Sbjct: 149 KSRPGFSPTDEVFSYYVNYFGRRKDFKAAHEVLADNREAVGVKCFEAIVDRLVRAGRPNK 208
Query: 260 AVALFEKMEKDYGFVRNMDSFKLIVSSLCDRGYASYAEKMAKSLANEFFPDEYICDVLIN 81
AV LF++ME DYGF R+ DS K I+S LC+RG+AS+AEKM KSLA+EFFPD YICD LI+
Sbjct: 209 AVELFDRMEADYGFERSFDSLKHIISCLCERGHASHAEKMVKSLASEFFPDAYICDALIS 268
Query: 80 GWCVDGKLEEVKRLVDEMYRGGFEIS 3
GWC+DGKL+E +RL++EM+RGGFE++
Sbjct: 269 GWCIDGKLDEARRLMNEMHRGGFEMT 294
>ref|XP_006345106.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
mitochondrial-like [Solanum tuberosum]
Length = 521
Score = 300 bits (768), Expect = 5e-79
Identities = 158/285 (55%), Positives = 197/285 (69%)
Frame = -3
Query: 860 LRKLLLLRSFSTLPNSLNHHLSTSRPPSAPPLHRPEFLPYAAFTRAHFLRFSIRHFSSET 681
LR LL +S+ N HHL P S L + F H+ FS H+S
Sbjct: 10 LRTLLRRCIYSSATNQ-THHL----PCSQLSLSKTHFFTSPL---PHYDSFSFSHYS--- 58
Query: 680 DNTDASSDNENPEKIGEEEKSIAELFSNELQKNPDAEPLPLPKRLDLSFSHITVTPTLLL 501
T S + PE ++E++ A+ S+EL K DAE L +P+ LDLSFSH+ +TP+L+L
Sbjct: 59 --TSFRSFSSQPES--DQEETTAQSLSSELVKELDAESLSIPQSLDLSFSHVNLTPSLIL 114
Query: 500 ATLSISPDAGRMALDFLKWAKSRPDFQPTDEVYSYFVDYFGRRKDFKATHEILVDGHGVT 321
TL++SPDAGR L F KW KS+ F+ DEV SYFVDYFGRRKDFKA ++L+DG G+
Sbjct: 115 TTLNLSPDAGRTVLGFFKWVKSKESFKVDDEVVSYFVDYFGRRKDFKAAQDVLIDGIGLA 174
Query: 320 GIKSLEALVDRLVRAGRPTHAVALFEKMEKDYGFVRNMDSFKLIVSSLCDRGYASYAEKM 141
G K+LE++VDRLVRAGR T VA FE MEKDYG VR++DS KL+VS LC+ G+ASYAEKM
Sbjct: 175 GRKTLESMVDRLVRAGRSTQTVAFFENMEKDYGLVRDLDSLKLVVSRLCEHGFASYAEKM 234
Query: 140 AKSLANEFFPDEYICDVLINGWCVDGKLEEVKRLVDEMYRGGFEI 6
KSLA+EFFPDEYICD+LI GWC+DGKL+E +RL EMYRGGFEI
Sbjct: 235 VKSLASEFFPDEYICDMLIRGWCIDGKLDEAQRLAGEMYRGGFEI 279
>ref|XP_004236066.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Solanum lycopersicum]
Length = 522
Score = 298 bits (763), Expect = 2e-78
Identities = 152/283 (53%), Positives = 194/283 (68%)
Frame = -3
Query: 854 KLLLLRSFSTLPNSLNHHLSTSRPPSAPPLHRPEFLPYAAFTRAHFLRFSIRHFSSETDN 675
+ LL R S+ + HHL P S L + F H+ FS H+S+ +
Sbjct: 11 RTLLRRCISSSATNQTHHL----PCSQISLSKTHFFTSPL---PHYDSFSFSHYSTSFRS 63
Query: 674 TDASSDNENPEKIGEEEKSIAELFSNELQKNPDAEPLPLPKRLDLSFSHITVTPTLLLAT 495
+ S + +E++ A+ S+EL K DAE L +P+ LDLSFSH+ +TP+L+L T
Sbjct: 64 FSSQSGRD-------QEETTAQSLSSELVKELDAESLSIPQSLDLSFSHVNLTPSLILTT 116
Query: 494 LSISPDAGRMALDFLKWAKSRPDFQPTDEVYSYFVDYFGRRKDFKATHEILVDGHGVTGI 315
L++SPDAGR L F KW KS+ F+ DEV S FVDYFGRRKDFKA ++L+DG G+TG
Sbjct: 117 LNLSPDAGRTVLGFFKWVKSKESFKVDDEVVSCFVDYFGRRKDFKAAQDVLIDGIGLTGR 176
Query: 314 KSLEALVDRLVRAGRPTHAVALFEKMEKDYGFVRNMDSFKLIVSSLCDRGYASYAEKMAK 135
K+LE++VDRLVRAGRPT VA FE MEKDYG R++DS KL+VS LC+ G+ASYAEKM K
Sbjct: 177 KTLESMVDRLVRAGRPTQTVAFFENMEKDYGLARDLDSLKLVVSRLCEHGFASYAEKMVK 236
Query: 134 SLANEFFPDEYICDVLINGWCVDGKLEEVKRLVDEMYRGGFEI 6
SLA EFFPDEYICD+L+ GWC+DGKL+E +RL EMYRGGFEI
Sbjct: 237 SLACEFFPDEYICDMLVRGWCIDGKLDEAQRLAGEMYRGGFEI 279
>emb|CBI15328.3| unnamed protein product [Vitis vinifera]
Length = 532
Score = 275 bits (702), Expect = 2e-71
Identities = 141/281 (50%), Positives = 188/281 (66%)
Frame = -3
Query: 848 LLLRSFSTLPNSLNHHLSTSRPPSAPPLHRPEFLPYAAFTRAHFLRFSIRHFSSETDNTD 669
LLLR FS+ +S S+S S+ L + L + L S RHF S +
Sbjct: 16 LLLRCFSSSSSSS----SSSSSSSSSSLVQSYCLSPTLSLDPYCLCSSQRHFVSPSFPLS 71
Query: 668 ASSDNENPEKIGEEEKSIAELFSNELQKNPDAEPLPLPKRLDLSFSHITVTPTLLLATLS 489
++ ++ IA+ S+EL K+PD+EP+P+ +RL LSFSHIT +P L+L TL+
Sbjct: 72 RRFSSQPNNSADDDHSQIAQSLSSELLKDPDSEPVPIIQRLQLSFSHITPSPPLILQTLN 131
Query: 488 ISPDAGRMALDFLKWAKSRPDFQPTDEVYSYFVDYFGRRKDFKATHEILVDGHGVTGIKS 309
SPDAGR L F KW S P F +DE S+FVDYFGRRKDFKA HE+L+DG G K+
Sbjct: 132 TSPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKAIHEVLMDGRNFAGAKT 191
Query: 308 LEALVDRLVRAGRPTHAVALFEKMEKDYGFVRNMDSFKLIVSSLCDRGYASYAEKMAKSL 129
LE+ +DRLVRAGR T V+ F++ME DYGF R+ +S ++VS LC+ G+AS+AEK+ K++
Sbjct: 192 LESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTMVVSKLCEHGFASHAEKVVKNV 251
Query: 128 ANEFFPDEYICDVLINGWCVDGKLEEVKRLVDEMYRGGFEI 6
ANE FP+E ICD+LI GWCVDGKL+E +RL +EM+RGGFEI
Sbjct: 252 ANEIFPNETICDLLIKGWCVDGKLDEARRLAEEMFRGGFEI 292
>ref|XP_006477702.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
mitochondrial-like [Citrus sinensis]
Length = 503
Score = 272 bits (695), Expect = 1e-70
Identities = 134/258 (51%), Positives = 175/258 (67%), Gaps = 3/258 (1%)
Frame = -3
Query: 770 PLHR---PEFLPYAAFTRAHFLRFSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFS 600
P HR P+ ++ F+ H+L F + FSS+ + NP+ I + ++ IA S
Sbjct: 17 PPHRFISPQSTYFSRFSPTHYLNFLSKPFSSKPTS--------NPKTIDDPDQVIARSLS 68
Query: 599 NELQKNPDAEPLPLPKRLDLSFSHITVTPTLLLATLSISPDAGRMALDFLKWAKSRPDFQ 420
EL +N +A+PLP+ +RL L FSH+T TP+L+ +TL+ SP+AGR L F W +F
Sbjct: 69 GELLENLEADPLPISQRLHLIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFS 128
Query: 419 PTDEVYSYFVDYFGRRKDFKATHEILVDGHGVTGIKSLEALVDRLVRAGRPTHAVALFEK 240
TDE S+F DYFGRRKDFKA H+ LVD V G K+L + +DRLVRAGRPT + FE+
Sbjct: 129 HTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFER 188
Query: 239 MEKDYGFVRNMDSFKLIVSSLCDRGYASYAEKMAKSLANEFFPDEYICDVLINGWCVDGK 60
ME+DYGF R+ DS +L+V LC+ GYASYAEK+ K ANE FPD+ ICD+LI GWCVDGK
Sbjct: 189 MERDYGFKRDKDSLRLVVEKLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGK 248
Query: 59 LEEVKRLVDEMYRGGFEI 6
L+E KRL EMYRGGFE+
Sbjct: 249 LDEAKRLAREMYRGGFEL 266
>ref|XP_006440794.1| hypothetical protein CICLE_v10019809mg [Citrus clementina]
gi|557543056|gb|ESR54034.1| hypothetical protein
CICLE_v10019809mg [Citrus clementina]
Length = 503
Score = 271 bits (693), Expect = 2e-70
Identities = 129/239 (53%), Positives = 166/239 (69%)
Frame = -3
Query: 722 HFLRFSIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSNELQKNPDAEPLPLPKRLD 543
+F RFS H+ + +S NP+ I + ++ IA S EL +N +A+PLP+ +RL
Sbjct: 28 YFSRFSPTHYLNFLSKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLH 87
Query: 542 LSFSHITVTPTLLLATLSISPDAGRMALDFLKWAKSRPDFQPTDEVYSYFVDYFGRRKDF 363
L FSH+T TP+L+ +TL+ SP+AGR L F W +F TDE S+F DYFGRRKDF
Sbjct: 88 LIFSHVTPTPSLVQSTLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDF 147
Query: 362 KATHEILVDGHGVTGIKSLEALVDRLVRAGRPTHAVALFEKMEKDYGFVRNMDSFKLIVS 183
KA H+ LVD V G K+L + +DRLVRAGRPT + FE+ME+DYGF R+ DS +L+V
Sbjct: 148 KAIHDFLVDNKEVLGPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVE 207
Query: 182 SLCDRGYASYAEKMAKSLANEFFPDEYICDVLINGWCVDGKLEEVKRLVDEMYRGGFEI 6
LC+ GYASYAEK+ K ANE FPD+ ICD+LI GWCVDGKL+E KRL EMYRGGFE+
Sbjct: 208 KLCENGYASYAEKLVKDTANEIFPDDKICDLLIKGWCVDGKLDEAKRLAGEMYRGGFEL 266
>ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Vitis vinifera]
Length = 516
Score = 271 bits (692), Expect = 3e-70
Identities = 128/234 (54%), Positives = 169/234 (72%)
Frame = -3
Query: 707 SIRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSNELQKNPDAEPLPLPKRLDLSFSH 528
S RHF S + ++ ++ IA+ S+EL K+PD+EP+P+ +RL LSFSH
Sbjct: 43 SQRHFVSPSFPLSRRFSSQPNNSADDDHSQIAQSLSSELLKDPDSEPVPIIQRLQLSFSH 102
Query: 527 ITVTPTLLLATLSISPDAGRMALDFLKWAKSRPDFQPTDEVYSYFVDYFGRRKDFKATHE 348
IT +P L+L TL+ SPDAGR L F KW S P F +DE S+FVDYFGRRKDFKA HE
Sbjct: 103 ITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKAIHE 162
Query: 347 ILVDGHGVTGIKSLEALVDRLVRAGRPTHAVALFEKMEKDYGFVRNMDSFKLIVSSLCDR 168
+L+DG G K+LE+ +DRLVRAGR T V+ F++ME DYGF R+ +S ++VS LC+
Sbjct: 163 VLMDGRNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTMVVSKLCEH 222
Query: 167 GYASYAEKMAKSLANEFFPDEYICDVLINGWCVDGKLEEVKRLVDEMYRGGFEI 6
G+AS+AEK+ K++ANE FP+E ICD+LI GWCVDGKL+E +RL +EM+RGGFEI
Sbjct: 223 GFASHAEKVVKNVANEIFPNETICDLLIKGWCVDGKLDEARRLAEEMFRGGFEI 276
>ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546235|gb|EEF47737.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 569
Score = 268 bits (686), Expect = 1e-69
Identities = 138/272 (50%), Positives = 187/272 (68%), Gaps = 3/272 (1%)
Frame = -3
Query: 812 LNHHLSTSRPPSAPPLHRPEFLPYAAFTRAHFLRFSIRHFS-SETDNTDASSDNENPEKI 636
L +H PP+ P + + F Y+A T HF +F+ S S+ +T + N N +
Sbjct: 62 LLYHYCLPSPPAPPLITKLAFSSYSAPT--HFPKFAFLPLSLSKPFSTQTLNPNNN---V 116
Query: 635 GEEEKSIAELFSNELQKNPDAEPLPLPKRLDLSFSHI--TVTPTLLLATLSISPDAGRMA 462
E+ IA+ S EL KNP+++ L + +RL+L FSHI ++TP+++L TL++SPDAGR
Sbjct: 117 LEDPNPIAQSISAELIKNPNSDSLSILQRLNLHFSHINNSITPSIILQTLNLSPDAGRTV 176
Query: 461 LDFLKWAKSRPDFQPTDEVYSYFVDYFGRRKDFKATHEILVDGHGVTGIKSLEALVDRLV 282
L F +W +F+ TDE S+F+DYFGRRKDF++THE+L D V G K E++V+RLV
Sbjct: 177 LGFHQWLVKVANFKNTDETISFFIDYFGRRKDFQSTHELLCDSKDVIGYKCFESMVNRLV 236
Query: 281 RAGRPTHAVALFEKMEKDYGFVRNMDSFKLIVSSLCDRGYASYAEKMAKSLANEFFPDEY 102
RAGR T + F++ME+DYGF R+ ++ +L+V LCD GYASYAEKM K+LANE FPDE
Sbjct: 237 RAGRATKVMGFFDRMERDYGFKRDRENLRLVVKMLCDNGYASYAEKMVKNLANEIFPDEN 296
Query: 101 ICDVLINGWCVDGKLEEVKRLVDEMYRGGFEI 6
ICD+LI GWCVDGKL+E KRL EMYRGGFEI
Sbjct: 297 ICDLLIKGWCVDGKLDEAKRLAGEMYRGGFEI 328
>ref|XP_006372539.1| hypothetical protein POPTR_0017s02600g [Populus trichocarpa]
gi|550319168|gb|ERP50336.1| hypothetical protein
POPTR_0017s02600g [Populus trichocarpa]
Length = 398
Score = 266 bits (680), Expect = 7e-69
Identities = 140/278 (50%), Positives = 179/278 (64%), Gaps = 5/278 (1%)
Frame = -3
Query: 824 LPNSLNHHLSTSRPPSAPPLHR-PEFLPYAAFTRAHFLRFSIRHFSSETDNTDASSDNEN 648
L + L H+ +S PP LH P LP T A S R FSS S N
Sbjct: 9 LRHLLRHYHLSSPPPITFSLHSTPTHLPK---TPAFPFCLSQRPFSS--------SQTLN 57
Query: 647 PEKIGEEEKSIAELFSNELQKNPDAEPLPLPKRLDLSFSHIT----VTPTLLLATLSISP 480
P I + +I + S E+ ++P+ +PL + +RL LSFSH+T +TP+L+L TL +SP
Sbjct: 58 PNAIESPDPAIVQSLSTEISRDPNTDPLSISERLHLSFSHLTKNNALTPSLVLQTLKLSP 117
Query: 479 DAGRMALDFLKWAKSRPDFQPTDEVYSYFVDYFGRRKDFKATHEILVDGHGVTGIKSLEA 300
DAGR + F W +F+ DE + FVDYFGRRKDFKA H++LV+G V G+K E+
Sbjct: 118 DAGRTVIGFHNWLIKDANFEQNDESLALFVDYFGRRKDFKAAHDLLVEGKSVAGVKCFES 177
Query: 299 LVDRLVRAGRPTHAVALFEKMEKDYGFVRNMDSFKLIVSSLCDRGYASYAEKMAKSLANE 120
++DRLVRAGR T + FE+ME+DYGF R+ +S +V LC+ GYASYAEKM K+LANE
Sbjct: 178 MIDRLVRAGRTTQVIGFFERMERDYGFKRDKESLTFVVQKLCENGYASYAEKMVKNLANE 237
Query: 119 FFPDEYICDVLINGWCVDGKLEEVKRLVDEMYRGGFEI 6
FPD+ ICD+LI GWCVDGKLEE KRL EMYRGGFEI
Sbjct: 238 IFPDDGICDLLIKGWCVDGKLEEAKRLAGEMYRGGFEI 275
>ref|XP_002302931.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 266 bits (680), Expect = 7e-69
Identities = 140/278 (50%), Positives = 179/278 (64%), Gaps = 5/278 (1%)
Frame = -3
Query: 824 LPNSLNHHLSTSRPPSAPPLHR-PEFLPYAAFTRAHFLRFSIRHFSSETDNTDASSDNEN 648
L + L H+ +S PP LH P LP T A S R FSS S N
Sbjct: 9 LRHLLRHYHLSSPPPITFSLHSTPTHLPK---TPAFPFCLSQRPFSS--------SQTLN 57
Query: 647 PEKIGEEEKSIAELFSNELQKNPDAEPLPLPKRLDLSFSHIT----VTPTLLLATLSISP 480
P I + +I + S E+ ++P+ +PL + +RL LSFSH+T +TP+L+L TL +SP
Sbjct: 58 PNAIESPDPAIVQSLSTEISRDPNTDPLSISERLHLSFSHLTKNNALTPSLVLQTLKLSP 117
Query: 479 DAGRMALDFLKWAKSRPDFQPTDEVYSYFVDYFGRRKDFKATHEILVDGHGVTGIKSLEA 300
DAGR + F W +F+ DE + FVDYFGRRKDFKA H++LV+G V G+K E+
Sbjct: 118 DAGRTVIGFHNWLIKDANFEQNDESLALFVDYFGRRKDFKAAHDLLVEGKSVAGVKCFES 177
Query: 299 LVDRLVRAGRPTHAVALFEKMEKDYGFVRNMDSFKLIVSSLCDRGYASYAEKMAKSLANE 120
++DRLVRAGR T + FE+ME+DYGF R+ +S +V LC+ GYASYAEKM K+LANE
Sbjct: 178 MIDRLVRAGRTTQVIGFFERMERDYGFKRDKESLTFVVQKLCENGYASYAEKMVKNLANE 237
Query: 119 FFPDEYICDVLINGWCVDGKLEEVKRLVDEMYRGGFEI 6
FPD+ ICD+LI GWCVDGKLEE KRL EMYRGGFEI
Sbjct: 238 IFPDDGICDLLIKGWCVDGKLEEAKRLAGEMYRGGFEI 275
>ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
mitochondrial-like [Glycine max]
Length = 509
Score = 265 bits (678), Expect = 1e-68
Identities = 142/284 (50%), Positives = 177/284 (62%), Gaps = 3/284 (1%)
Frame = -3
Query: 848 LLLRSFS---TLPNSLNHHLSTSRPPSAPPLHRPEFLPYAAFTRAHFLRFSIRHFSSETD 678
LLLRS S T P+ ++H P P F FT + F+ RHFSSET
Sbjct: 12 LLLRSRSLPFTSPSPIHHS------PLFPRHSSSHFYSRTLFTPSFFIT---RHFSSETQ 62
Query: 677 NTDASSDNENPEKIGEEEKSIAELFSNELQKNPDAEPLPLPKRLDLSFSHITVTPTLLLA 498
+ IA S+EL K PD++ L + +RL+LSFSHIT TP L+L
Sbjct: 63 TDE-----------------IASSLSSELLKEPDSDALSVSQRLNLSFSHITPTPNLILQ 105
Query: 497 TLSISPDAGRMALDFLKWAKSRPDFQPTDEVYSYFVDYFGRRKDFKATHEILVDGHGVTG 318
TL++SP AGR L F +W S P F TD+ SYFVDYFGRRKDFKATH++L G
Sbjct: 106 TLNLSPQAGRTVLGFHQWLSSNPQFSHTDDTLSYFVDYFGRRKDFKATHDVLAAASPAAG 165
Query: 317 IKSLEALVDRLVRAGRPTHAVALFEKMEKDYGFVRNMDSFKLIVSSLCDRGYASYAEKMA 138
K+L + +DRLVRAGR + AV FE+ME+DYG R+ DS K++V LC G+ASYAEKM
Sbjct: 166 PKTLASAIDRLVRAGRSSQAVQFFERMERDYGLKRDRDSLKVVVEKLCSEGFASYAEKMV 225
Query: 137 KSLANEFFPDEYICDVLINGWCVDGKLEEVKRLVDEMYRGGFEI 6
K LA EFFPDE CD+LI GWC+DGKL+E +RL EMYRGGF++
Sbjct: 226 KDLAREFFPDEATCDMLIRGWCIDGKLDEAQRLAGEMYRGGFDL 269
>gb|ESW16823.1| hypothetical protein PHAVU_007G187600g [Phaseolus vulgaris]
Length = 505
Score = 264 bits (675), Expect = 3e-68
Identities = 148/281 (52%), Positives = 177/281 (62%)
Frame = -3
Query: 848 LLLRSFSTLPNSLNHHLSTSRPPSAPPLHRPEFLPYAAFTRAHFLRFSIRHFSSETDNTD 669
LLLRS S SL+ PP P F F+ + FL RHFSSET TD
Sbjct: 8 LLLRSGSFSLRSLSP--IHPPPPLIPGDSTTHFHSRTLFSPSLFLN---RHFSSETQ-TD 61
Query: 668 ASSDNENPEKIGEEEKSIAELFSNELQKNPDAEPLPLPKRLDLSFSHITVTPTLLLATLS 489
IA S+EL K D++PL + +RL LSFSHIT TP L+L TL+
Sbjct: 62 P----------------IANSLSSELLKELDSDPLSVSQRLHLSFSHITPTPNLILQTLN 105
Query: 488 ISPDAGRMALDFLKWAKSRPDFQPTDEVYSYFVDYFGRRKDFKATHEILVDGHGVTGIKS 309
+SP AGR L F +W S P F TD SYFVDYFGRRKDFKATH++L +G K+
Sbjct: 106 LSPQAGRTVLGFHQWLSSNPQFTHTDHTLSYFVDYFGRRKDFKATHDLLSAAAAASGPKT 165
Query: 308 LEALVDRLVRAGRPTHAVALFEKMEKDYGFVRNMDSFKLIVSSLCDRGYASYAEKMAKSL 129
LE+ +DRLVRAGRP+ AV FE+ME+DYG R+ S K++V LC +G+ASYAEKM K L
Sbjct: 166 LESAIDRLVRAGRPSQAVQFFERMERDYGLKRDRCSLKVVVEKLCSKGFASYAEKMVKEL 225
Query: 128 ANEFFPDEYICDVLINGWCVDGKLEEVKRLVDEMYRGGFEI 6
A EFFPDE CD+LI GWCVDGKLEE +RL EMYRGGFE+
Sbjct: 226 AREFFPDEATCDLLIRGWCVDGKLEEAQRLAGEMYRGGFEL 266
>ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
mitochondrial-like isoformX1 [Glycine max]
Length = 509
Score = 263 bits (671), Expect = 8e-68
Identities = 148/293 (50%), Positives = 180/293 (61%), Gaps = 7/293 (2%)
Frame = -3
Query: 863 HLRKLLLLRSFSTLPNSLNHHLSTSRPPSAPPLHRPEFLPYAAFTRAHFLR-------FS 705
HLRKLLL RS S LS + P P+H P P + H F
Sbjct: 8 HLRKLLL-RSRS---------LSFTSPT---PIHPPPLFPQQPSSHFHSRTLLTPSSLFI 54
Query: 704 IRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSNELQKNPDAEPLPLPKRLDLSFSHI 525
IRHFSSET TD IA S+EL K PD++ L + +RL LSFSHI
Sbjct: 55 IRHFSSETQ-TD----------------QIAHSLSSELLKEPDSDALSVSQRLHLSFSHI 97
Query: 524 TVTPTLLLATLSISPDAGRMALDFLKWAKSRPDFQPTDEVYSYFVDYFGRRKDFKATHEI 345
T TP L+L TL++S ++GR L F +W S P F TD+ SYFVDYFGRRKDFKATH++
Sbjct: 98 TPTPNLILQTLNLSHESGRTVLGFHQWLSSNPQFSHTDDTLSYFVDYFGRRKDFKATHDV 157
Query: 344 LVDGHGVTGIKSLEALVDRLVRAGRPTHAVALFEKMEKDYGFVRNMDSFKLIVSSLCDRG 165
L G K+L + +DRLVRAGRP+ AV FE+ME+DYG R+ S K++V LC +G
Sbjct: 158 LSAASPAAGPKTLASAIDRLVRAGRPSQAVQFFERMERDYGLKRDRASLKVVVEKLCSKG 217
Query: 164 YASYAEKMAKSLANEFFPDEYICDVLINGWCVDGKLEEVKRLVDEMYRGGFEI 6
+ASYAEKM K LA FFPDE CD+LI GWCVDGKL+E +RL EMYRGGFE+
Sbjct: 218 FASYAEKMVKDLAKVFFPDEATCDMLIKGWCVDGKLDEAQRLAGEMYRGGFEL 270
>gb|EOY22114.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 494
Score = 262 bits (670), Expect = 1e-67
Identities = 126/204 (61%), Positives = 150/204 (73%)
Frame = -3
Query: 617 IAELFSNELQKNPDAEPLPLPKRLDLSFSHITVTPTLLLATLSISPDAGRMALDFLKWAK 438
IA+ S E+ KNPD +PLP+ +RL LSFSHI T L+ TL++SP+AGR L F W
Sbjct: 51 IAQSLSTEILKNPDLDPLPITQRLQLSFSHIKPTSLLISQTLNLSPEAGRTVLGFNDWLL 110
Query: 437 SRPDFQPTDEVYSYFVDYFGRRKDFKATHEILVDGHGVTGIKSLEALVDRLVRAGRPTHA 258
S P+F TDE S+F+DYFGRRKDFKA H++LV+ V G K+ E+ VDRLVRAGRP
Sbjct: 111 SDPNFNHTDETLSFFIDYFGRRKDFKAAHDLLVNNKSVAGPKTFESSVDRLVRAGRPAQV 170
Query: 257 VALFEKMEKDYGFVRNMDSFKLIVSSLCDRGYASYAEKMAKSLANEFFPDEYICDVLING 78
+ FE M KDYGF R+ +S +LIV LC+ GYASYAEKM K+ ANE FPDE ICD+LI G
Sbjct: 171 LGFFEGMGKDYGFKRDKESLRLIVEKLCENGYASYAEKMVKNSANEIFPDEMICDLLIKG 230
Query: 77 WCVDGKLEEVKRLVDEMYRGGFEI 6
WCVDGKLEE KRL EMYRGGFEI
Sbjct: 231 WCVDGKLEEAKRLAGEMYRGGFEI 254
>ref|XP_003630353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524375|gb|AET04829.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 620
Score = 260 bits (664), Expect = 5e-67
Identities = 148/292 (50%), Positives = 184/292 (63%), Gaps = 7/292 (2%)
Frame = -3
Query: 860 LRKLLL----LRSFSTLPNSLNHHLSTSRPPSAPPLHRPEFLPYAAFTRAHFLR---FSI 702
LR++LL RS S++ +S +PP PP P RA F F I
Sbjct: 6 LRRILLRSVRFRSISSISSS------PIQPPHHPPHINPSNFSSHFHNRALFTPPSLFQI 59
Query: 701 RHFSSETDNTDASSDNENPEKIGEEEKSIAELFSNELQKNPDAEPLPLPKRLDLSFSHIT 522
HFSSE+ S+ +P IA S+EL K PD++P + +RL+LSFSHIT
Sbjct: 60 EHFSSESKPEPVSTTEPDP---------IAIAISSELLKEPDSDPSSVTQRLNLSFSHIT 110
Query: 521 VTPTLLLATLSISPDAGRMALDFLKWAKSRPDFQPTDEVYSYFVDYFGRRKDFKATHEIL 342
TP L+L TL++S +AGR L F +W S P F TDE SYFVDYFGRRKDFKAT +IL
Sbjct: 111 PTPNLILETLNLSLEAGRNVLGFHQWLASNPKFTHTDETLSYFVDYFGRRKDFKATDKIL 170
Query: 341 VDGHGVTGIKSLEALVDRLVRAGRPTHAVALFEKMEKDYGFVRNMDSFKLIVSSLCDRGY 162
G G G K+L + VDRLVRAGR + AV FE+MEKDYG R+ S K++V LC +GY
Sbjct: 171 SGGGG--GQKTLLSAVDRLVRAGRQSQAVQFFERMEKDYGLKRDRSSMKVVVEKLCLKGY 228
Query: 161 ASYAEKMAKSLANEFFPDEYICDVLINGWCVDGKLEEVKRLVDEMYRGGFEI 6
ASYAEKM LA EFFPDE ICD+L+ G+C+DGK+EE +RL EMYRGGFE+
Sbjct: 229 ASYAEKMTTDLAKEFFPDEEICDLLVAGYCIDGKIEEARRLAGEMYRGGFEL 280
>gb|AFK45023.1| unknown [Medicago truncatula]
Length = 521
Score = 260 bits (664), Expect = 5e-67
Identities = 148/292 (50%), Positives = 184/292 (63%), Gaps = 7/292 (2%)
Frame = -3
Query: 860 LRKLLL----LRSFSTLPNSLNHHLSTSRPPSAPPLHRPEFLPYAAFTRAHFLR---FSI 702
LR++LL RS S++ +S +PP PP P RA F F I
Sbjct: 6 LRRILLRSVRFRSISSISSS------PIQPPHHPPHINPSNFSSHFHNRALFTPPSLFQI 59
Query: 701 RHFSSETDNTDASSDNENPEKIGEEEKSIAELFSNELQKNPDAEPLPLPKRLDLSFSHIT 522
HFSSE+ S+ +P IA S+EL K PD++P + +RL+LSFSHIT
Sbjct: 60 EHFSSESKPEPVSTTEPDP---------IAIAISSELLKEPDSDPSSVTQRLNLSFSHIT 110
Query: 521 VTPTLLLATLSISPDAGRMALDFLKWAKSRPDFQPTDEVYSYFVDYFGRRKDFKATHEIL 342
TP L+L TL++S +AGR L F +W S P F TDE SYFVDYFGRRKDFKAT +IL
Sbjct: 111 PTPNLILETLNLSLEAGRNVLGFHQWLASNPKFTHTDETLSYFVDYFGRRKDFKATDKIL 170
Query: 341 VDGHGVTGIKSLEALVDRLVRAGRPTHAVALFEKMEKDYGFVRNMDSFKLIVSSLCDRGY 162
G G G K+L + VDRLVRAGR + AV FE+MEKDYG R+ S K++V LC +GY
Sbjct: 171 SGGGG--GQKTLLSAVDRLVRAGRQSQAVQFFERMEKDYGLKRDRSSMKVVVEKLCLKGY 228
Query: 161 ASYAEKMAKSLANEFFPDEYICDVLINGWCVDGKLEEVKRLVDEMYRGGFEI 6
ASYAEKM LA EFFPDE ICD+L+ G+C+DGK+EE +RL EMYRGGFE+
Sbjct: 229 ASYAEKMTTDLAKEFFPDEEICDLLVAGYCIDGKIEEARRLAGEMYRGGFEL 280
>ref|NP_200904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262710|sp|Q9FME4.1|PP438_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein PNM1,
mitochondrial; AltName: Full=PPR PROTEIN LOCALIZED TO
THE NUCLEUS AND MITOCHONDRIA 1; Flags: Precursor
gi|10177319|dbj|BAB10645.1| unnamed protein product
[Arabidopsis thaliana] gi|332010020|gb|AED97403.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 521
Score = 251 bits (641), Expect = 2e-64
Identities = 142/281 (50%), Positives = 175/281 (62%)
Frame = -3
Query: 848 LLLRSFSTLPNSLNHHLSTSRPPSAPPLHRPEFLPYAAFTRAHFLRFSIRHFSSETDNTD 669
LLLRSF + +S+N S R S+ PL F P + F F R FSSET+
Sbjct: 13 LLLRSFIS-SSSVNTLQSQPRIISSKPL----FSPLPPSRSSIFSTFPSRFFSSETNAES 67
Query: 668 ASSDNENPEKIGEEEKSIAELFSNELQKNPDAEPLPLPKRLDLSFSHITVTPTLLLATLS 489
S D+ IA FS EL NPDAE + +R +LSFSHIT P L+L TL+
Sbjct: 68 ESLDSNE----------IALSFSKELTGNPDAESQTISQRFNLSFSHITPNPDLILQTLN 117
Query: 488 ISPDAGRMALDFLKWAKSRPDFQPTDEVYSYFVDYFGRRKDFKATHEILVDGHGVTGIKS 309
+SP+AGR AL F +W S +F TDE S+FVDYFGRRKDFK EI+ G+ G K+
Sbjct: 118 LSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKYKGIAGGKT 177
Query: 308 LEALVDRLVRAGRPTHAVALFEKMEKDYGFVRNMDSFKLIVSSLCDRGYASYAEKMAKSL 129
LE+ +DRLVRAGRP FEKME DYG R+ +S L+V LC++G+AS AEKM K+
Sbjct: 178 LESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNT 237
Query: 128 ANEFFPDEYICDVLINGWCVDGKLEEVKRLVDEMYRGGFEI 6
ANE FPDE ICD+LI+GWC+ KL+E RL EM RGGFEI
Sbjct: 238 ANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEI 278
>ref|XP_006282075.1| hypothetical protein CARUB_v10028321mg [Capsella rubella]
gi|482550779|gb|EOA14973.1| hypothetical protein
CARUB_v10028321mg [Capsella rubella]
Length = 522
Score = 251 bits (641), Expect = 2e-64
Identities = 141/281 (50%), Positives = 174/281 (61%)
Frame = -3
Query: 848 LLLRSFSTLPNSLNHHLSTSRPPSAPPLHRPEFLPYAAFTRAHFLRFSIRHFSSETDNTD 669
LLLR+ + +S N S SR S+ P F P + F F R FSSET N D
Sbjct: 13 LLLRTIGSSSSSANILQSQSRLISSTP----SFSPLPPSRPSIFSTFPCRFFSSET-NAD 67
Query: 668 ASSDNENPEKIGEEEKSIAELFSNELQKNPDAEPLPLPKRLDLSFSHITVTPTLLLATLS 489
+ S + N IA FS EL NP+AE + +R +LSFSHIT P L+L TL+
Sbjct: 68 SESSDPN---------QIALSFSKELTGNPEAESHSISQRFNLSFSHITPNPDLILQTLN 118
Query: 488 ISPDAGRMALDFLKWAKSRPDFQPTDEVYSYFVDYFGRRKDFKATHEILVDGHGVTGIKS 309
+SP+AGR AL F +W S F TDE SYFVDYFGRRKDFK EI+ G++G K+
Sbjct: 119 LSPEAGRAALGFNEWLDSSNGFSHTDETVSYFVDYFGRRKDFKGMLEIISKYKGISGAKT 178
Query: 308 LEALVDRLVRAGRPTHAVALFEKMEKDYGFVRNMDSFKLIVSSLCDRGYASYAEKMAKSL 129
LE+ +DRLVRAGRP FEKME DYG R+ +S L+V LC++G+AS AEKM K+
Sbjct: 179 LESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNT 238
Query: 128 ANEFFPDEYICDVLINGWCVDGKLEEVKRLVDEMYRGGFEI 6
AN+ FPDE ICD+LI+GWC KL+E RL EM RGGFEI
Sbjct: 239 ANDIFPDENICDLLISGWCTAEKLDEATRLAGEMSRGGFEI 279
>ref|XP_002866406.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312241|gb|EFH42665.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 522
Score = 249 bits (637), Expect = 7e-64
Identities = 139/281 (49%), Positives = 173/281 (61%)
Frame = -3
Query: 848 LLLRSFSTLPNSLNHHLSTSRPPSAPPLHRPEFLPYAAFTRAHFLRFSIRHFSSETDNTD 669
LLLR+F + +S+N + SR S+ +P F P + F F R FSSET
Sbjct: 13 LLLRTFISSSSSVNTLQAQSRLISS----KPSFSPLPPSRSSTFSTFPSRLFSSET---- 64
Query: 668 ASSDNENPEKIGEEEKSIAELFSNELQKNPDAEPLPLPKRLDLSFSHITVTPTLLLATLS 489
N E + IA FS EL NPDAE + +R +LSFSHIT P L+L TL+
Sbjct: 65 ------NAESETLDSNEIALSFSKELTGNPDAESHAISQRFNLSFSHITPNPDLILQTLN 118
Query: 488 ISPDAGRMALDFLKWAKSRPDFQPTDEVYSYFVDYFGRRKDFKATHEILVDGHGVTGIKS 309
+SP+AGR AL F +W S +F TDE S+FVDYFGRRKDFK EI+ G+ G K+
Sbjct: 119 LSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKYKGIAGAKT 178
Query: 308 LEALVDRLVRAGRPTHAVALFEKMEKDYGFVRNMDSFKLIVSSLCDRGYASYAEKMAKSL 129
LE+ +DRLVRA RP A FEKME DYG R+ DS L+V LC++ +AS AEKM K+
Sbjct: 179 LESAIDRLVRADRPKQVAAFFEKMENDYGLKRDRDSLTLVVKKLCEKRHASIAEKMVKNT 238
Query: 128 ANEFFPDEYICDVLINGWCVDGKLEEVKRLVDEMYRGGFEI 6
AN+ FPDE ICD+LI+GWC KL+E RL EM RGGFEI
Sbjct: 239 ANDIFPDENICDLLISGWCTAEKLDEATRLAGEMSRGGFEI 279
>ref|XP_004503897.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Cicer arietinum]
Length = 516
Score = 249 bits (636), Expect = 9e-64
Identities = 140/293 (47%), Positives = 178/293 (60%), Gaps = 8/293 (2%)
Frame = -3
Query: 860 LRKLLL----LRSFSTLPNSLNHHLSTSRPP----SAPPLHRPEFLPYAAFTRAHFLRFS 705
LR+LLL RS S L +S S PP PP P F P + F
Sbjct: 6 LRRLLLRSVRFRSLSFLSSS-----SIEPPPYFPHQTPPKFSPNFFPPSPL-------FQ 53
Query: 704 IRHFSSETDNTDASSDNENPEKIGEEEKSIAELFSNELQKNPDAEPLPLPKRLDLSFSHI 525
I+HFSS+ + + NE IA S++L D++P + +RL LSFSHI
Sbjct: 54 IKHFSSKPVSPTQTPPNELDP--------IATALSSQLLNESDSDPSSVAERLHLSFSHI 105
Query: 524 TVTPTLLLATLSISPDAGRMALDFLKWAKSRPDFQPTDEVYSYFVDYFGRRKDFKATHEI 345
T TP ++L TL +SP+AGR+ L F +W S P F TDE SYFVDYFGRR DFKA ++
Sbjct: 106 TPTPNVILQTLDLSPEAGRIVLGFHQWLASNPKFTHTDETVSYFVDYFGRRNDFKAMDKV 165
Query: 344 LVDGHGVTGIKSLEALVDRLVRAGRPTHAVALFEKMEKDYGFVRNMDSFKLIVSSLCDRG 165
L G G K+L + +DRLVRA RP AV F++MEKDYG R+ S K++V LC +G
Sbjct: 166 LTAGGA--GPKTLISAIDRLVRADRPNQAVQFFDRMEKDYGLTRDRGSLKVVVEKLCLKG 223
Query: 164 YASYAEKMAKSLANEFFPDEYICDVLINGWCVDGKLEEVKRLVDEMYRGGFEI 6
Y SYAEKM K LANEFFPDE +CD+L+ G+CVDGK+E+ +RL EMYRGGFE+
Sbjct: 224 YGSYAEKMVKDLANEFFPDEAMCDLLVTGYCVDGKIEQARRLAGEMYRGGFEL 276