BLASTX nr result

ID: Rehmannia25_contig00022578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00022578
         (382 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006394964.1| hypothetical protein EUTSA_v10004203mg [Eutr...    56   6e-06
ref|XP_006287727.1| hypothetical protein CARUB_v10000938mg [Caps...    56   6e-06
ref|NP_198099.1| seryl-tRNA synthetase / serine--tRNA ligase [Ar...    56   6e-06
ref|XP_002874369.1| seryl-tRNA synthetase [Arabidopsis lyrata su...    56   6e-06
gb|AFK49391.1| unknown [Lotus japonicus]                               55   7e-06
ref|XP_002519916.1| seryl-tRNA synthetase, putative [Ricinus com...    55   7e-06
gb|EOX97283.1| Seryl-tRNA synthetase / serine--tRNA ligase isofo...    55   1e-05
ref|XP_006306305.1| hypothetical protein CARUB_v10012172mg [Caps...    55   1e-05

>ref|XP_006394964.1| hypothetical protein EUTSA_v10004203mg [Eutrema salsugineum]
           gi|557091603|gb|ESQ32250.1| hypothetical protein
           EUTSA_v10004203mg [Eutrema salsugineum]
          Length = 451

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/29 (82%), Positives = 28/29 (96%)
 Frame = -3

Query: 89  RKSNDKAKEYVHMLNSTLTATERTICCIL 3
           +KSN++ K+YVHMLNSTLTATERTICCIL
Sbjct: 380 KKSNEQTKQYVHMLNSTLTATERTICCIL 408


>ref|XP_006287727.1| hypothetical protein CARUB_v10000938mg [Capsella rubella]
           gi|482556433|gb|EOA20625.1| hypothetical protein
           CARUB_v10000938mg [Capsella rubella]
          Length = 451

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/29 (82%), Positives = 28/29 (96%)
 Frame = -3

Query: 89  RKSNDKAKEYVHMLNSTLTATERTICCIL 3
           +KSN++ K+YVHMLNSTLTATERTICCIL
Sbjct: 380 KKSNEQTKQYVHMLNSTLTATERTICCIL 408


>ref|NP_198099.1| seryl-tRNA synthetase / serine--tRNA ligase [Arabidopsis thaliana]
           gi|2501056|sp|Q39230.1|SYS_ARATH RecName:
           Full=Serine--tRNA ligase; AltName: Full=Seryl-tRNA
           synthetase; Short=SerRS; AltName:
           Full=Seryl-tRNA(Ser/Sec) synthetase
           gi|13507571|gb|AAK28648.1|AF360352_1 putative seryl-tRNA
           synthetase [Arabidopsis thaliana]
           gi|1359497|emb|CAA94388.1| seryl-tRNA Synthetase
           [Arabidopsis thaliana] gi|15293241|gb|AAK93731.1|
           putative seryl-tRNA synthetase [Arabidopsis thaliana]
           gi|332006309|gb|AED93692.1| seryl-tRNA synthetase /
           serine--tRNA ligase [Arabidopsis thaliana]
          Length = 451

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/29 (82%), Positives = 28/29 (96%)
 Frame = -3

Query: 89  RKSNDKAKEYVHMLNSTLTATERTICCIL 3
           +KSN++ K+YVHMLNSTLTATERTICCIL
Sbjct: 380 KKSNEQTKQYVHMLNSTLTATERTICCIL 408


>ref|XP_002874369.1| seryl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
           gi|297320206|gb|EFH50628.1| seryl-tRNA synthetase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 451

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/29 (82%), Positives = 28/29 (96%)
 Frame = -3

Query: 89  RKSNDKAKEYVHMLNSTLTATERTICCIL 3
           +KSN++ K+YVHMLNSTLTATERTICCIL
Sbjct: 380 KKSNEQTKQYVHMLNSTLTATERTICCIL 408


>gb|AFK49391.1| unknown [Lotus japonicus]
          Length = 238

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/29 (82%), Positives = 28/29 (96%)
 Frame = -3

Query: 89  RKSNDKAKEYVHMLNSTLTATERTICCIL 3
           RKSN++ K+YVH+LNSTLTATERTICCIL
Sbjct: 171 RKSNEQLKQYVHLLNSTLTATERTICCIL 199


>ref|XP_002519916.1| seryl-tRNA synthetase, putative [Ricinus communis]
           gi|223540962|gb|EEF42520.1| seryl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 447

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/29 (79%), Positives = 29/29 (100%)
 Frame = -3

Query: 89  RKSNDKAKEYVHMLNSTLTATERTICCIL 3
           +KSN++AK+YVH+LNSTLTATERT+CCIL
Sbjct: 377 KKSNEQAKQYVHLLNSTLTATERTLCCIL 405


>gb|EOX97283.1| Seryl-tRNA synthetase / serine--tRNA ligase isoform 1 [Theobroma
           cacao]
          Length = 447

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/29 (79%), Positives = 29/29 (100%)
 Frame = -3

Query: 89  RKSNDKAKEYVHMLNSTLTATERTICCIL 3
           +K+N++AK+YVH+LNSTLTATERTICCIL
Sbjct: 377 KKNNEQAKQYVHLLNSTLTATERTICCIL 405


>ref|XP_006306305.1| hypothetical protein CARUB_v10012172mg [Capsella rubella]
           gi|482575016|gb|EOA39203.1| hypothetical protein
           CARUB_v10012172mg [Capsella rubella]
          Length = 445

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 3/46 (6%)
 Frame = -3

Query: 131 SLCICYKQPR---HWFFRKSNDKAKEYVHMLNSTLTATERTICCIL 3
           S C  Y+  R    + ++KSN++ K+YVHMLNSTL ATERTICCIL
Sbjct: 358 SNCTEYQSRRLNIRYGYKKSNEETKQYVHMLNSTLCATERTICCIL 403


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