BLASTX nr result

ID: Rehmannia25_contig00022435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00022435
         (401 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006353332.1| PREDICTED: methyl-CpG-binding domain-contain...    57   3e-06
gb|EOY23161.1| Methyl-CPG-binding domain protein 13, putative is...    56   4e-06
gb|EOY23160.1| Methyl-CPG-binding domain protein 13, putative is...    56   4e-06
gb|EOY23159.1| Methyl-CPG-binding domain protein 13, putative is...    56   4e-06
ref|XP_004234378.1| PREDICTED: uncharacterized protein LOC101246...    55   7e-06

>ref|XP_006353332.1| PREDICTED: methyl-CpG-binding domain-containing protein 13-like
           isoform X1 [Solanum tuberosum]
           gi|565373550|ref|XP_006353333.1| PREDICTED:
           methyl-CpG-binding domain-containing protein 13-like
           isoform X2 [Solanum tuberosum]
          Length = 594

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
 Frame = +2

Query: 65  VNTTKNVGKS--GPSDEPQIDTTGKSGNDSNEHRPKCRTENPTNNNQEKPITHANKGVGV 238
           +NT+K+V  +  G +   +++T    G+ + + + +    + T   ++       K V  
Sbjct: 371 INTSKHVATTVTGITISKKVET----GSLTIKRKKRLVASSQTEREKKPSPAEPAKTVLA 426

Query: 239 DCKQEEKHDKNLDSSLKNLLMDPCIEFAIKTLTGAIPIEEVTKVGE 376
            C+ ++K +  L+SSL +L  DPCIEFAIKTLTG IP+    KV E
Sbjct: 427 SCEGDKKGETALESSLSDLWTDPCIEFAIKTLTGTIPVINEKKVDE 472


>gb|EOY23161.1| Methyl-CPG-binding domain protein 13, putative isoform 3, partial
           [Theobroma cacao]
          Length = 544

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/99 (36%), Positives = 54/99 (54%)
 Frame = +2

Query: 59  AEVNTTKNVGKSGPSDEPQIDTTGKSGNDSNEHRPKCRTENPTNNNQEKPITHANKGVGV 238
           +E+N++K  G       P++    K   + +  R  C  + P  +    P  HA K V +
Sbjct: 378 SELNSSKGPGILAT---PEVHAERKVNGNGSVERQGCGMDLPLAD-PAIPKEHAGK-VEM 432

Query: 239 DCKQEEKHDKNLDSSLKNLLMDPCIEFAIKTLTGAIPIE 355
             K ++K   +LD+ L ++  DPCIEFAIKTLTGAIP+E
Sbjct: 433 GHKTDDKPGSSLDTPLADIWADPCIEFAIKTLTGAIPVE 471


>gb|EOY23160.1| Methyl-CPG-binding domain protein 13, putative isoform 2 [Theobroma
           cacao]
          Length = 621

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/99 (36%), Positives = 54/99 (54%)
 Frame = +2

Query: 59  AEVNTTKNVGKSGPSDEPQIDTTGKSGNDSNEHRPKCRTENPTNNNQEKPITHANKGVGV 238
           +E+N++K  G       P++    K   + +  R  C  + P  +    P  HA K V +
Sbjct: 455 SELNSSKGPGILAT---PEVHAERKVNGNGSVERQGCGMDLPLAD-PAIPKEHAGK-VEM 509

Query: 239 DCKQEEKHDKNLDSSLKNLLMDPCIEFAIKTLTGAIPIE 355
             K ++K   +LD+ L ++  DPCIEFAIKTLTGAIP+E
Sbjct: 510 GHKTDDKPGSSLDTPLADIWADPCIEFAIKTLTGAIPVE 548


>gb|EOY23159.1| Methyl-CPG-binding domain protein 13, putative isoform 1 [Theobroma
           cacao]
          Length = 625

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/99 (36%), Positives = 54/99 (54%)
 Frame = +2

Query: 59  AEVNTTKNVGKSGPSDEPQIDTTGKSGNDSNEHRPKCRTENPTNNNQEKPITHANKGVGV 238
           +E+N++K  G       P++    K   + +  R  C  + P  +    P  HA K V +
Sbjct: 459 SELNSSKGPGILAT---PEVHAERKVNGNGSVERQGCGMDLPLAD-PAIPKEHAGK-VEM 513

Query: 239 DCKQEEKHDKNLDSSLKNLLMDPCIEFAIKTLTGAIPIE 355
             K ++K   +LD+ L ++  DPCIEFAIKTLTGAIP+E
Sbjct: 514 GHKTDDKPGSSLDTPLADIWADPCIEFAIKTLTGAIPVE 552


>ref|XP_004234378.1| PREDICTED: uncharacterized protein LOC101246025 [Solanum
           lycopersicum]
          Length = 587

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
 Frame = +2

Query: 68  NTTKNVGKS--GPSDEPQIDTTGKSGNDSNEHRPKCRTENPTNNNQEKPITHANKGVGVD 241
           NT+K+V  +  G +   +++T    GN + + +    T   T   ++       K V   
Sbjct: 375 NTSKHVASTVTGITINKKVET----GNLTIKRKQHLVTSPQTEGEKKPSPAEPAKTVLAS 430

Query: 242 CKQEEKHDKNLDSSLKNLLMDPCIEFAIKTLTGAIPIEEVTKVGE 376
           C  ++K +  L+SSL +L  DPCIEFAIKTLTG IP+    K+ E
Sbjct: 431 CDVDKKGETALESSLSDLWTDPCIEFAIKTLTGTIPVINEKKLDE 475


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