BLASTX nr result
ID: Rehmannia25_contig00022079
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00022079
(521 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 69 6e-10
ref|NP_001053783.1| Os04g0603800 [Oryza sativa Japonica Group] g... 51 3e-09
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 67 3e-09
gb|ABF98227.1| retrotransposon protein, putative, unclassified [... 63 4e-08
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group] 63 4e-08
emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group] 63 5e-08
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 62 1e-07
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 60 2e-07
gb|AAX95226.1| retrotransposon protein, putative, unclassified [... 59 7e-07
gb|ABA91843.2| retrotransposon protein, putative, unclassified [... 59 7e-07
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 58 1e-06
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 58 1e-06
emb|CAD40406.3| OSJNBa0065J03.2 [Oryza sativa Japonica Group] 39 3e-06
gb|AAM01111.1|AC098682_15 putative retroelement [Oryza sativa Ja... 41 3e-06
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 56 6e-06
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 68.9 bits (167), Expect = 6e-10
Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 5/151 (3%)
Frame = -1
Query: 521 RSLDMADGTRMKDLKLQSFRQNSVHLRKSLKLCSK*FGLYAILQKK*EKSLINWIYLLDL 342
R+L++ D M LKL+ +RQ++ +R SLKL SK +G + +LQK + Y L L
Sbjct: 1334 RNLEVGD---MVYLKLKPYRQSAFGIRGSLKLRSKFYGPFKVLQK-----IGQLAYKLQL 1385
Query: 341 GSTRCFMCSFXXXX*VQNTYLHRIYPLTDL-----DGHFKIAHLEILNHHTISCKNVPVE 177
F ++ H I P+++L DG K L +L + K V V
Sbjct: 1386 PDDAQIHPVFHVSQLKKHLGKHAI-PMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGVAVT 1444
Query: 176 HALVRWCNSDPTQATWEGIKHLQTKFPSFNP 84
L+ W N P +ATWE +Q FPSFNP
Sbjct: 1445 QWLILWQNLSPAEATWEDASVIQAMFPSFNP 1475
>ref|NP_001053783.1| Os04g0603800 [Oryza sativa Japonica Group]
gi|113565354|dbj|BAF15697.1| Os04g0603800, partial
[Oryza sativa Japonica Group]
Length = 123
Score = 51.2 bits (121), Expect(2) = 3e-09
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = -1
Query: 266 PLTDLDGHFKIAHLEILNHHTISCKNVPVEHALVRWCNSDPTQATWEGIKHLQTKFPSFN 87
PL D DG+ K + +L + +N PV LV W N P ATWE +Q FP F
Sbjct: 63 PLVDEDGNIKTEPVAVLARRVVPRRNEPVTQWLVHWENLSPEDATWEDSAFIQATFPHFR 122
Query: 86 P 84
P
Sbjct: 123 P 123
Score = 35.8 bits (81), Expect(2) = 3e-09
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = -3
Query: 390 KKMRKVAYKLDLPAGSRIHPVFHVFLLXXXXXXXXXXXPDLPL 262
K++ KVAY L LP + IHPVFHV L P+LPL
Sbjct: 22 KRIGKVAYHLQLPEEAGIHPVFHVSQLKKHVGNLVVPLPNLPL 64
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 66.6 bits (161), Expect = 3e-09
Identities = 47/150 (31%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Frame = -1
Query: 521 RSLDMADGTRMKDLKLQSFRQNSVHLRKSLKLCSK*FGLYAILQKK*EKSLINWIYLLDL 342
R L++ D M LKLQ +RQN+ +R SLKL K +G + +L+K + Y L L
Sbjct: 814 RKLEVGD---MVYLKLQPYRQNAFGIRGSLKLRGKYYGPFKVLEKVGAVA-----YRLQL 865
Query: 341 GSTRCFMCSFXXXX*VQNTYLHRI----YPLTDLDGHFKIAHLEILNHHTISCKNVPVEH 174
F ++ H + P DG K + +L I NV V
Sbjct: 866 PEEAAIHPVFHVSQLKKHLGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQ 925
Query: 173 ALVRWCNSDPTQATWEGIKHLQTKFPSFNP 84
L+ W N P +ATWE ++Q FP+F P
Sbjct: 926 WLILWSNLTPAEATWEDASYIQKVFPNFQP 955
>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1160
Score = 63.2 bits (152), Expect = 4e-08
Identities = 48/150 (32%), Positives = 65/150 (43%), Gaps = 4/150 (2%)
Frame = -1
Query: 521 RSLDMADGTRMKDLKLQSFRQNSVHLRKSLKLCSK*FGLYAILQKK*EKSLINWIYLLDL 342
R ++ D M LK+Q +RQN+ LR SLKL +K +G + +L+K + Y L L
Sbjct: 1019 RQFELGD---MVYLKMQPYRQNAFGLRGSLKLRAKFYGPFRVLEK-----IGKVAYKLQL 1070
Query: 341 GSTRCFMCSFXXXX*VQNTYLHRI----YPLTDLDGHFKIAHLEILNHHTISCKNVPVEH 174
F ++ I PL DG K L +L I +N PV
Sbjct: 1071 PEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVKTEPLAVLARRVIPRQNEPVVQ 1130
Query: 173 ALVRWCNSDPTQATWEGIKHLQTKFPSFNP 84
L+ W N P ATWE +Q FP F P
Sbjct: 1131 WLIHWENLTPEDATWENATFIQATFPHFRP 1160
>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1246
Score = 63.2 bits (152), Expect = 4e-08
Identities = 48/150 (32%), Positives = 65/150 (43%), Gaps = 4/150 (2%)
Frame = -1
Query: 521 RSLDMADGTRMKDLKLQSFRQNSVHLRKSLKLCSK*FGLYAILQKK*EKSLINWIYLLDL 342
R ++ D M LK+Q +RQN+ LR SLKL +K +G + +L+K + Y L L
Sbjct: 1105 RQFELGD---MVYLKMQPYRQNAFGLRGSLKLRAKFYGPFRVLEK-----IGKVAYKLQL 1156
Query: 341 GSTRCFMCSFXXXX*VQNTYLHRI----YPLTDLDGHFKIAHLEILNHHTISCKNVPVEH 174
F ++ I PL DG K L +L I +N PV
Sbjct: 1157 PEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVKTEPLAVLARRVIPRQNEPVVQ 1216
Query: 173 ALVRWCNSDPTQATWEGIKHLQTKFPSFNP 84
L+ W N P ATWE +Q FP F P
Sbjct: 1217 WLIHWENLTPEDATWENATFIQATFPHFRP 1246
>emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]
Length = 1373
Score = 62.8 bits (151), Expect = 5e-08
Identities = 45/133 (33%), Positives = 60/133 (45%)
Frame = -1
Query: 482 LKLQSFRQNSVHLRKSLKLCSK*FGLYAILQKK*EKSLINWIYLLDLGSTRCFMCSFXXX 303
LK+Q +RQN+ LR SLKL +K +G + IL K+ K + + G F S
Sbjct: 1242 LKMQPYRQNAFGLRGSLKLRAKFYGPFRIL-KRIGKVAYHLQLPEEAGIHPVFHVSQLKK 1300
Query: 302 X*VQNTYLHRIYPLTDLDGHFKIAHLEILNHHTISCKNVPVEHALVRWCNSDPTQATWEG 123
PL D DG+ K + +L + +N PV LV W N P ATWE
Sbjct: 1301 HVGNLVVPLPNLPLVDEDGNIKTEPVAVLARRVVPRRNEPVTQWLVHWENLSPEDATWED 1360
Query: 122 IKHLQTKFPSFNP 84
+Q FP F P
Sbjct: 1361 SAFIQATFPHFRP 1373
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 61.6 bits (148), Expect = 1e-07
Identities = 51/154 (33%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Frame = -1
Query: 521 RSLDMADGTRMKDLKLQSFRQNSVHLRKSLKLCSK*FGLYAILQKK*EKSLINWIYLLDL 342
R+L + D M LKLQ +RQ + +R SLKL SK +G + I++K + + L
Sbjct: 1445 RTLAVGD---MVYLKLQPYRQTAFGIRGSLKLRSKFYGPFKIMEKV---GRVAYKLQLPE 1498
Query: 341 GSTRCFMCSFXXXX*VQNTYLH---RIYPLTDL-----DGHFKIAHLEILNHHTISCKNV 186
GS + V H R P+ +L DG K + +L I V
Sbjct: 1499 GS------NIHPVFHVSQLKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGGV 1552
Query: 185 PVEHALVRWCNSDPTQATWEGIKHLQTKFPSFNP 84
V LV W N P++ATWE +Q+ FPSFNP
Sbjct: 1553 AVTQWLVLWHNLSPSEATWEDASMIQSMFPSFNP 1586
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 60.5 bits (145), Expect = 2e-07
Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 5/151 (3%)
Frame = -1
Query: 521 RSLDMADGTRMKDLKLQSFRQNSVHLRKSLKLCSK*FGLYAILQKK*EKSLINWIYLLDL 342
R+L++ D M LKLQ +RQ ++ +R SLKL SK +G + +++K + Y L L
Sbjct: 1470 RTLELGD---MVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEKMGAVA-----YKLQL 1521
Query: 341 GSTRCFMCSFXXXX*VQNTYLHRIYPLTDL-----DGHFKIAHLEILNHHTISCKNVPVE 177
F ++ I P+ +L DG K +L I N PV
Sbjct: 1522 PDGAGIHPVFHVSQLKKHLGARAI-PMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVT 1580
Query: 176 HALVRWCNSDPTQATWEGIKHLQTKFPSFNP 84
L+ W N P +ATWE ++Q FP+F P
Sbjct: 1581 QWLILWENLTPAEATWEDASYIQAAFPNFQP 1611
>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1513
Score = 58.9 bits (141), Expect = 7e-07
Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Frame = -1
Query: 521 RSLDMADGTRMKDLKLQSFRQNSVHLRKSLKLCSK*FGLYAILQKK*EKSLINWIYLLDL 342
RSL++ D M +KLQ +RQ + +R SLKL SK +G + +L+K + + Y L L
Sbjct: 1372 RSLNVGD---MVYIKLQPYRQTAFGIRGSLKLRSKFYGPFKVLEKIGQVA-----YKLQL 1423
Query: 341 GSTRCFMCSFXXXX*VQNTYLH---RIYPLTDL-----DGHFKIAHLEILNHHTISCKNV 186
S V H R P+++L DG K + +L I V
Sbjct: 1424 PED----ASIHPVFHVSQLKKHLGQRAVPMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGV 1479
Query: 185 PVEHALVRWCNSDPTQATWEGIKHLQTKFPSFNP 84
V L+ W N P ATWE +Q+ +P+F+P
Sbjct: 1480 AVTQWLILWENLGPADATWEDAAVIQSMYPTFHP 1513
>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1411
Score = 58.9 bits (141), Expect = 7e-07
Identities = 48/154 (31%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Frame = -1
Query: 521 RSLDMADGTRMKDLKLQSFRQNSVHLRKSLKLCSK*FGLYAILQKK*EKSLINWIYLLDL 342
RSL++ D M +KLQ +RQ + +R SLKL SK +G + +L+K + + Y L L
Sbjct: 1270 RSLNVGD---MVYIKLQPYRQTAFGIRGSLKLRSKFYGPFKVLEKIGQVA-----YKLQL 1321
Query: 341 GSTRCFMCSFXXXX*VQNTYLH---RIYPLTDL-----DGHFKIAHLEILNHHTISCKNV 186
S V H R P+++L DG K + +L I V
Sbjct: 1322 PED----ASIHPVFHVSQLKKHLGQRAVPMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGV 1377
Query: 185 PVEHALVRWCNSDPTQATWEGIKHLQTKFPSFNP 84
V L+ W N P ATWE +Q+ +P+F+P
Sbjct: 1378 AVTQWLILWENLGPADATWEDAAVIQSMYPTFHP 1411
>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
Japonica Group]
Length = 866
Score = 58.2 bits (139), Expect = 1e-06
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Frame = -1
Query: 521 RSLDMADGTRMKDLKLQSFRQNSVHLRKSLKLCSK*FGLYAILQKK*EKSLINWIYLLDL 342
R+L++ D M LK+Q +R NS+ L SLKL S+ +G + +L++ + + LL +
Sbjct: 725 RTLEVGD---MVYLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERI---GSVAYKLLLPV 778
Query: 341 GST--RCFMCSFXXXX*VQNTYLHRIYPLTDLDGHFKIAHLEILNHHTISCKNVPVEHAL 168
S F S + PL D +G L +L+ I N PV
Sbjct: 779 TSQIHHVFHVSQLKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWK 838
Query: 167 VRWCNSDPTQATWEGIKHLQTKFPSFNP 84
+ W N + ATWE + FPSF P
Sbjct: 839 IHWANLPESAATWEDAAFITKVFPSFTP 866
>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
Length = 645
Score = 58.2 bits (139), Expect = 1e-06
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Frame = -1
Query: 521 RSLDMADGTRMKDLKLQSFRQNSVHLRKSLKLCSK*FGLYAILQKK*EKSLINWIYLLDL 342
R+L++ D M LK+Q +R NS+ L SLKL S+ +G + +L++ + + LL +
Sbjct: 504 RTLEVGD---MVYLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERI---GSVAYKLLLPV 557
Query: 341 GST--RCFMCSFXXXX*VQNTYLHRIYPLTDLDGHFKIAHLEILNHHTISCKNVPVEHAL 168
S F S + PL D +G L +L+ I N PV
Sbjct: 558 TSQIHHVFHVSQLKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWK 617
Query: 167 VRWCNSDPTQATWEGIKHLQTKFPSFNP 84
+ W N + ATWE + FPSF P
Sbjct: 618 IHWANLPESAATWEDAAFITKVFPSFTP 645
>emb|CAD40406.3| OSJNBa0065J03.2 [Oryza sativa Japonica Group]
Length = 1629
Score = 38.9 bits (89), Expect(2) = 3e-06
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -1
Query: 224 EILNHHTISCKNVPVEHALVRWCNSDPTQATWEGIKHLQTKFPSFNPWEQ 75
+IL+ + V L+RW +S ATWE ++ L+T+FP+ W Q
Sbjct: 1517 QILDSRVVKRATDAVLQVLIRWSDSAAEDATWENMEDLRTRFPTALAWGQ 1566
Score = 37.7 bits (86), Expect(2) = 3e-06
Identities = 20/37 (54%), Positives = 24/37 (64%), Gaps = 6/37 (16%)
Frame = -3
Query: 411 RSVRYFA------KKMRKVAYKLDLPAGSRIHPVFHV 319
RS R FA +K+ VAYKL LPA + +HPVFHV
Sbjct: 1452 RSFRSFAVGDWVLRKIGTVAYKLQLPATASVHPVFHV 1488
>gb|AAM01111.1|AC098682_15 putative retroelement [Oryza sativa Japonica Group]
Length = 1043
Score = 41.2 bits (95), Expect(2) = 3e-06
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = -3
Query: 390 KKMRKVAYKLDLPAGSRIHPVFHVFLLXXXXXXXXXXXPDLP 265
+++ VAY+LDLPAGS +HPV HV LL D+P
Sbjct: 936 ERVGAVAYRLDLPAGSHVHPVVHVSLLKKAVKPDIQVSSDIP 977
Score = 35.0 bits (79), Expect(2) = 3e-06
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = -1
Query: 260 TDLDGHFKIAHLE-----ILNHHTISCKNVPVEHALVRWCNSDPTQATWEGIKHLQTKFP 96
+D+ H I ++E +L I V + L+RW ATWE ++ L+ +FP
Sbjct: 974 SDIPQHCFIDNVELTPVAVLRPQLIKRGKSVVPYGLIRWSGLPDELATWENLRQLKERFP 1033
Query: 95 SFNPWEQ*SL 66
+ W Q +L
Sbjct: 1034 AALAWGQANL 1043
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 55.8 bits (133), Expect = 6e-06
Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Frame = -1
Query: 482 LKLQSFRQNSVHLRKSLKLCSK*FGLYAILQKK*EKSLINWIYLLDLGST--RCFMCSFX 309
LK+Q +R NS+ L SLKL SK +G + +L++ + + LL S F S
Sbjct: 1180 LKMQPYRHNSLGLHSSLKLHSKYYGPFRVLERI---GSVAYKLLLPASSQIHPVFHVSQL 1236
Query: 308 XXX*VQNTYLHRIYPLTDLDGHFKIAHLEILNHHTISCKNVPVEHALVRWCNSDPTQATW 129
PLTD +G+ +L I N PV V+W N + ATW
Sbjct: 1237 KKHIGPKVVPEPGLPLTDDNGNILSQPTAVLERRLIPQNNAPVVQWKVQWANLPLSAATW 1296
Query: 128 EGIKHLQTKFPSFNP 84
E + FP+FNP
Sbjct: 1297 EDAAFISKVFPAFNP 1311