BLASTX nr result
ID: Rehmannia25_contig00021896
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00021896
(1313 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 283 1e-73
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 280 7e-73
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 279 2e-72
gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis] 263 9e-68
gb|EMJ12511.1| hypothetical protein PRUPE_ppa000513mg [Prunus pe... 263 2e-67
ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 259 2e-66
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 256 2e-65
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 253 2e-64
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu... 251 5e-64
ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago trunc... 250 1e-63
gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlise... 249 2e-63
gb|ESW27397.1| hypothetical protein PHAVU_003G198500g [Phaseolus... 248 4e-63
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 247 7e-63
ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 245 3e-62
ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 245 3e-62
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 245 3e-62
gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobro... 244 6e-62
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici... 244 6e-62
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum] 244 8e-62
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum] 243 1e-61
>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
Length = 1119
Score = 283 bits (723), Expect = 1e-73
Identities = 133/196 (67%), Positives = 159/196 (81%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGA AEMPR LKPREFPDFMERW+KPMYIS G LGKLYR ++ + ++ +D
Sbjct: 916 AKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGVIKSYIRRNSDDLSTDRA 975
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
DAYD DL+V+GY++F++TA+THKE YLD M +LLNYYGAE EVEILTGNL++KS YLQ
Sbjct: 976 IQDAYDHDLLVEGYEAFIETAKTHKEMYLDSMNSLLNYYGAEKEVEILTGNLRQKSVYLQ 1035
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC 774
RDNRRY E+KDR+LVS K+L KEVKGWF C E + QKL SAWY+VTYHP+Y + S NC
Sbjct: 1036 RDNRRYFELKDRILVSAKSLHKEVKGWFSGCCTEDDHQKLVSAWYHVTYHPSYCHESANC 1095
Query: 773 LGFPWVVGDILMDIKS 726
LGFPWVVGDIL++IKS
Sbjct: 1096 LGFPWVVGDILLNIKS 1111
>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum lycopersicum]
Length = 1119
Score = 280 bits (717), Expect = 7e-73
Identities = 133/196 (67%), Positives = 159/196 (81%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGA AEMPR LKPREFPDFMERW+KPMYIS G LGKLYR ++ + ++ +D
Sbjct: 916 AKTGAAAEMPRFLKPREFPDFMERWDKPMYISEGVLGKLYRGVMKSYIRRNSDDLSADRA 975
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
DAYD DL+V+GY++F +TA+THK YLD M +LLNYYGAE EVEILTGNL++KS YLQ
Sbjct: 976 IQDAYDHDLLVEGYEAFTETAKTHKAMYLDSMNSLLNYYGAEKEVEILTGNLRQKSVYLQ 1035
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC 774
RDNRRY E+KDR+LVS K+L KEVKGWF S C E + QKLASAWY+VTYHP+Y + S NC
Sbjct: 1036 RDNRRYFELKDRILVSAKSLHKEVKGWFTSCCQEDDHQKLASAWYHVTYHPSYCHESANC 1095
Query: 773 LGFPWVVGDILMDIKS 726
LGFPWVVGDIL+++KS
Sbjct: 1096 LGFPWVVGDILLNMKS 1111
>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Length = 1120
Score = 279 bits (714), Expect = 2e-72
Identities = 135/197 (68%), Positives = 159/197 (80%), Gaps = 2/197 (1%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGA AEMPR LKPREFPDF+ERW+KPMYIS G LGKLYRA V ++N+D ++
Sbjct: 917 AKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGKLYRAIVN--SSVRSNSDDLGSV 974
Query: 1133 PS--DAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGY 960
+ DAYD L+ DGY++F++TA+ HKE YLD M +LLNYYGAE EVEILTGNL++KS Y
Sbjct: 975 RAIQDAYDHALLFDGYEAFIETAKNHKETYLDRMNSLLNYYGAEKEVEILTGNLRQKSVY 1034
Query: 959 LQRDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSK 780
LQRDNRRY E+KDR+LVS K+L KEVKGWF C E E +KLASAWY+VTYHP+Y GS
Sbjct: 1035 LQRDNRRYFELKDRILVSAKSLQKEVKGWFTGCCKEDEHKKLASAWYHVTYHPSYCEGSA 1094
Query: 779 NCLGFPWVVGDILMDIK 729
NCLGFPWVVGDIL+DIK
Sbjct: 1095 NCLGFPWVVGDILLDIK 1111
>gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
Length = 1115
Score = 263 bits (673), Expect = 9e-68
Identities = 120/196 (61%), Positives = 157/196 (80%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGAPAEMPRAL+PR++PDFMER ++PMY+S+GALGKLYRATV+ Q +N S+
Sbjct: 912 AKTGAPAEMPRALRPRDYPDFMERLDRPMYVSNGALGKLYRATVESESQGSSNLVWSEKT 971
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
AYD DL V+G++ F+ AE+H++ Y+D+M ++NYY ESE E+LTGNL+K++ YLQ
Sbjct: 972 AEAAYDRDLEVNGFEEFIALAESHRDMYIDKMNGIMNYYELESEDEVLTGNLRKRAAYLQ 1031
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC 774
RDNRRY EVKDR+L++VK+L +E KGWF+ SC+ EQQK+ASAWY+VTYHP Y S NC
Sbjct: 1032 RDNRRYFEVKDRILLAVKSLQREAKGWFEGSCEAMEQQKMASAWYHVTYHPNYYQKSINC 1091
Query: 773 LGFPWVVGDILMDIKS 726
L FPW+ GDIL++IKS
Sbjct: 1092 LSFPWIKGDILLNIKS 1107
>gb|EMJ12511.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
Length = 1118
Score = 263 bits (671), Expect = 2e-67
Identities = 123/199 (61%), Positives = 157/199 (78%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGAPAEM R LKP+EFPDFMER +KPMYIS+GALGKLYRA V + Q KTN S+ I
Sbjct: 915 AKTGAPAEMSRTLKPKEFPDFMERVDKPMYISNGALGKLYRAVVGSVLQEKTNLVWSEQI 974
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
AYD DL VDG +S L+ A+ H++ Y+++M T++NYYGA +E EILTGNL+ ++ YLQ
Sbjct: 975 AEAAYDQDLEVDGLESVLEVAKGHRDMYIEKMRTMMNYYGAVTEDEILTGNLRNRAAYLQ 1034
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC 774
RDNRRYG++KDR+ +S+KNL KE KG F+SSC +E Q++ASAWY+VTYHP+Y NC
Sbjct: 1035 RDNRRYGDMKDRISLSLKNLQKEAKGLFESSCPVSEHQRMASAWYHVTYHPSYFQQDMNC 1094
Query: 773 LGFPWVVGDILMDIKSAKN 717
L FPW+VGDIL++IK+ N
Sbjct: 1095 LSFPWIVGDILLNIKALNN 1113
>ref|XP_004508850.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cicer arietinum]
Length = 1122
Score = 259 bits (661), Expect = 2e-66
Identities = 120/196 (61%), Positives = 155/196 (79%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGAPAEMPRALKPREFPDFMER++KPMYIS+G LGKLYRA V+ Q ++N LS+
Sbjct: 920 AKTGAPAEMPRALKPREFPDFMERFDKPMYISNGVLGKLYRALVESTTQVRSNIVLSEKF 979
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
+AYD L V+G+++FL+TA +HKE Y +M +L+++Y AE+E E+LTGNLQ ++ YLQ
Sbjct: 980 AEEAYDHQLEVNGFEAFLETASSHKEMYAQKMSSLMSFYDAETEDEMLTGNLQNRASYLQ 1039
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC 774
RDNRRYG++KDR+L+SVK+L +E K WF+S C E Q +ASAWY+VTYHP Y + S
Sbjct: 1040 RDNRRYGDMKDRILISVKDLQREAKEWFESDCQPHEYQLMASAWYHVTYHPKYSHESSTF 1099
Query: 773 LGFPWVVGDILMDIKS 726
L FPW+VGDIL+ IKS
Sbjct: 1100 LSFPWIVGDILLHIKS 1115
>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
Length = 1131
Score = 256 bits (653), Expect = 2e-65
Identities = 123/199 (61%), Positives = 151/199 (75%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGAPAEMP ALKP+EFPDFMER +KP YIS G LGKLYRAT+ I Q ++NA S+ I
Sbjct: 930 AKTGAPAEMPLALKPKEFPDFMEREDKPRYISFGVLGKLYRATLDSIMQIRSNAIWSEKI 989
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
+YD DL VDG+++FL AE+HKE Y +EM L+NYYGA +E EILTGNL+ ++ YLQ
Sbjct: 990 AEASYDHDLEVDGFEAFLGVAESHKEMYEEEMNALMNYYGASTEDEILTGNLRNRASYLQ 1049
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC 774
RDNRRYG++KDR+L+S KNL E K WF SSC E E +LASAWY+VTY P+Y
Sbjct: 1050 RDNRRYGDMKDRILLSAKNLQNEAKEWFGSSCKENEHPQLASAWYHVTYSPSYCKERMAL 1109
Query: 773 LGFPWVVGDILMDIKSAKN 717
L FPW+VGDIL++IKS +
Sbjct: 1110 LSFPWIVGDILLNIKSVNS 1128
>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
gi|297733815|emb|CBI15062.3| unnamed protein product
[Vitis vinifera]
Length = 1127
Score = 253 bits (645), Expect = 2e-64
Identities = 121/199 (60%), Positives = 154/199 (77%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGAPAEMPR LKP+EFPDFMER +KPMYIS+GALGKLYRAT+ K++ S I
Sbjct: 914 AKTGAPAEMPRVLKPKEFPDFMERVDKPMYISNGALGKLYRATIASRVNEKSSFVWSGTI 973
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
P AYD DL VDG+++FL+ A+ HKE Y ++M TL+N+YGAESE E+LTGNL+ K YLQ
Sbjct: 974 PGAAYDHDLEVDGFETFLEIAKLHKEMYAEKMATLMNFYGAESEDEMLTGNLRNKLMYLQ 1033
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC 774
RDNRR+ E+KDR+L+SVK+L KE K W SC + QK+ASAWY+VTYH T+ + + N
Sbjct: 1034 RDNRRFTEMKDRILISVKSLQKEAKEWLYGSCKPHQHQKMASAWYHVTYHSTFSSQTPNF 1093
Query: 773 LGFPWVVGDILMDIKSAKN 717
L FPW+VG++L+ IKSA +
Sbjct: 1094 LSFPWIVGEVLLVIKSANS 1112
>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
gi|222868578|gb|EEF05709.1| hypothetical protein
POPTR_0015s08500g [Populus trichocarpa]
Length = 1110
Score = 251 bits (641), Expect = 5e-64
Identities = 121/196 (61%), Positives = 148/196 (75%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGAPAEMP LKPREFPDFMER EK MYIS G LGKLYR Q ++N S I
Sbjct: 909 AKTGAPAEMPLYLKPREFPDFMERAEKQMYISDGVLGKLYRDIHDSTRQERSNFMWSKKI 968
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
YD DL V G++ FL A +KE+Y+++M TL++YYGA++E EILTGNL+ + YLQ
Sbjct: 969 AEATYDQDLEVKGFEDFLGIASIYKEKYMEKMSTLMDYYGAKTEDEILTGNLRHRPTYLQ 1028
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC 774
RDNR+YG+VKDR+LVS+KNL KE K WF+SSC+ E Q +ASAWY+VTYHPTY + NC
Sbjct: 1029 RDNRKYGDVKDRILVSLKNLKKEAKEWFESSCNPTEHQCMASAWYHVTYHPTYFHERMNC 1088
Query: 773 LGFPWVVGDILMDIKS 726
L FPW+VGDIL++IKS
Sbjct: 1089 LSFPWIVGDILLNIKS 1104
>ref|XP_003608944.1| Rna-dependent RNA polymerase [Medicago truncatula]
gi|355509999|gb|AES91141.1| Rna-dependent RNA polymerase
[Medicago truncatula]
Length = 1308
Score = 250 bits (638), Expect = 1e-63
Identities = 120/210 (57%), Positives = 157/210 (74%), Gaps = 2/210 (0%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGAPAEMPR+LKPREFPDFMER+EKPMYIS G LGKLYRAT+ Q + + +S+
Sbjct: 921 AKTGAPAEMPRSLKPREFPDFMERFEKPMYISKGVLGKLYRATIDSNLQVRFDMVMSEKF 980
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
+AYD L VDG++ FL+TA +H++ Y +M +L+++YGA +E E+LTGNLQ ++ YLQ
Sbjct: 981 AKEAYDHQLEVDGFEVFLETALSHRDMYAQKMISLMSFYGATTEDEMLTGNLQNRASYLQ 1040
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC 774
RDNRRYG++KDR+L+SVK+L E K WF+S C E Q +ASAWY+VTYHP Y S
Sbjct: 1041 RDNRRYGDMKDRILISVKDLQLEAKEWFESDCQPHEYQLMASAWYHVTYHPKYYIESSTF 1100
Query: 773 LGFPWVVGDILMDIKSAK--NGMIVEYSVE 690
L FPW+VGDIL+ IKSA + V+Y ++
Sbjct: 1101 LSFPWIVGDILLHIKSANKIHKFFVDYMIK 1130
Score = 80.5 bits (197), Expect = 1e-12
Identities = 38/53 (71%), Positives = 43/53 (81%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTN 1155
AKTGA AEMPR LKP+EFPDFMER+EKPMY+S G LGKLYRA V+ Q +N
Sbjct: 1170 AKTGALAEMPRVLKPKEFPDFMERFEKPMYVSKGVLGKLYRALVESTMQLTSN 1222
Score = 75.9 bits (185), Expect = 4e-11
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Frame = -1
Query: 1061 KEQYLDEMGTLLNYYGAESEVEI-LTGNLQKKSGYLQRDNRRYGEVKDRVLVSVK--NLV 891
K Y+ + G L Y A E + LT N +L K +++++K +L
Sbjct: 1196 KPMYVSK-GVLGKLYRALVESTMQLTSNFVSSGNFLS---------KKHMIINLKLMDLQ 1245
Query: 890 KEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNCLGFPWVVGDILMDIKSAKNGM 711
EVK WF+S C E Q +ASAWY+V +HP Y + S N + FPW+VGDIL+ +K A
Sbjct: 1246 LEVKEWFESDCQPHEHQLMASAWYHVIHHPKYYHKSSNFVSFPWIVGDILLYVKHANTST 1305
Query: 710 IV 705
++
Sbjct: 1306 VL 1307
>gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlisea aurea]
Length = 1094
Score = 249 bits (636), Expect = 2e-63
Identities = 126/203 (62%), Positives = 154/203 (75%), Gaps = 4/203 (1%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AK+GAPA MPRAL PRE+PDFMER KP Y S G LGKLYRA ++FI Q + ++ I
Sbjct: 896 AKSGAPAAMPRALLPREYPDFMERVGKPTYPSTGPLGKLYRAALRFIGQRNS----ANEI 951
Query: 1133 PSDAY-DPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYL 957
PS + D DL+ DG+++FL+TA +H+E+Y + MG LL+YYGAE E EILTGN++ KS YL
Sbjct: 952 PSRGFFDGDLVADGHEAFLETALSHRERYSERMGQLLSYYGAEDEAEILTGNIESKSSYL 1011
Query: 956 QRDNRRYGEVKDRVLVSVKNLVKEVKGWF---KSSCDEAEQQKLASAWYYVTYHPTYLNG 786
RDNRRYGEVKDR+LVSVK+L+KE K WF SS E + +KLASAWY VTYHP Y G
Sbjct: 1012 SRDNRRYGEVKDRILVSVKSLMKEAKVWFGDGLSSEKEGDDRKLASAWYVVTYHPRYGVG 1071
Query: 785 SKNCLGFPWVVGDILMDIKSAKN 717
+NC GFPW VG +LMDIK+AKN
Sbjct: 1072 RRNCSGFPWAVGSVLMDIKAAKN 1094
>gb|ESW27397.1| hypothetical protein PHAVU_003G198500g [Phaseolus vulgaris]
Length = 1119
Score = 248 bits (633), Expect = 4e-63
Identities = 116/202 (57%), Positives = 153/202 (75%), Gaps = 1/202 (0%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGAPA MPR LKPREFPDFMER EKPMYIS G LGKLYRA ++ Q K + S+ +
Sbjct: 916 AKTGAPAAMPRVLKPREFPDFMERVEKPMYISKGVLGKLYRAIIESQMQIKYSFVWSEKL 975
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
+AYD L V+G+++FL+TA +HKE Y +M +L+N+YGAE+E E+L GNLQ ++ YLQ
Sbjct: 976 AEEAYDRSLEVNGFEAFLETASSHKEMYAQKMSSLMNFYGAETEDEMLLGNLQNRASYLQ 1035
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC 774
RDNRRYG++KDR+L+SVKNL +E K WF++SC E + +ASAWY+VTYHP+Y +C
Sbjct: 1036 RDNRRYGDMKDRILLSVKNLQREAKEWFETSCQPHEYRPMASAWYHVTYHPSYYCQESSC 1095
Query: 773 -LGFPWVVGDILMDIKSAKNGM 711
L FPW+VG++L+ IKS +
Sbjct: 1096 FLSFPWIVGEVLLQIKSVNKAV 1117
>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
2 [Cucumis sativus]
Length = 1117
Score = 247 bits (631), Expect = 7e-63
Identities = 115/196 (58%), Positives = 150/196 (76%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGAPAEMPR LKPREFPDFMER++KPMYIS LGKLYRA V+ I Q ++ S+
Sbjct: 914 AKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSIEQERSRLVWSEEA 973
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
YD DL VDG+++FL+ AET+KE Y+++M L+NYYGAE E EIL G+L+ ++ YLQ
Sbjct: 974 ARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEILMGDLRSRASYLQ 1033
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC 774
RDNR+YG++KDR+L+SVKNL KEVK WF++SCD ++ +ASAWY+VTYHP+Y
Sbjct: 1034 RDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYHVTYHPSYFKEDMFY 1093
Query: 773 LGFPWVVGDILMDIKS 726
FPW V D+L++IK+
Sbjct: 1094 FSFPWAVSDVLLNIKA 1109
>ref|XP_006579561.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X2 [Glycine
max]
Length = 941
Score = 245 bits (626), Expect = 3e-62
Identities = 115/202 (56%), Positives = 154/202 (76%), Gaps = 1/202 (0%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGAPA MPR LKPREFPDFMER +KPMYIS G LGKLYRA ++ Q + + S+
Sbjct: 738 AKTGAPAAMPRVLKPREFPDFMERVDKPMYISKGVLGKLYRAIIESQMQIRYSFVWSEKH 797
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
+AYD L V+G+++FL+TA THKE Y ++M +L+++YGAE+E E+L GNLQ ++ YLQ
Sbjct: 798 AEEAYDRSLEVNGFEAFLETASTHKEMYAEKMSSLMDFYGAETEDEMLLGNLQNRASYLQ 857
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC 774
RDNRRYG++KDR+L+SVKNL +E K WF++SC+ E + +ASAWY+VTYHP+Y C
Sbjct: 858 RDNRRYGDMKDRILLSVKNLQREAKEWFETSCEPHEYKPMASAWYHVTYHPSYYCRESPC 917
Query: 773 -LGFPWVVGDILMDIKSAKNGM 711
L FPW+VG+IL+ I+S G+
Sbjct: 918 FLSFPWIVGEILLQIRSVSKGV 939
>ref|XP_006579560.1| PREDICTED: RNA-dependent RNA polymerase 2-like isoform X1 [Glycine
max]
Length = 1121
Score = 245 bits (626), Expect = 3e-62
Identities = 115/202 (56%), Positives = 154/202 (76%), Gaps = 1/202 (0%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGAPA MPR LKPREFPDFMER +KPMYIS G LGKLYRA ++ Q + + S+
Sbjct: 918 AKTGAPAAMPRVLKPREFPDFMERVDKPMYISKGVLGKLYRAIIESQMQIRYSFVWSEKH 977
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
+AYD L V+G+++FL+TA THKE Y ++M +L+++YGAE+E E+L GNLQ ++ YLQ
Sbjct: 978 AEEAYDRSLEVNGFEAFLETASTHKEMYAEKMSSLMDFYGAETEDEMLLGNLQNRASYLQ 1037
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC 774
RDNRRYG++KDR+L+SVKNL +E K WF++SC+ E + +ASAWY+VTYHP+Y C
Sbjct: 1038 RDNRRYGDMKDRILLSVKNLQREAKEWFETSCEPHEYKPMASAWYHVTYHPSYYCRESPC 1097
Query: 773 -LGFPWVVGDILMDIKSAKNGM 711
L FPW+VG+IL+ I+S G+
Sbjct: 1098 FLSFPWIVGEILLQIRSVSKGV 1119
>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Fragaria vesca subsp.
vesca]
Length = 1136
Score = 245 bits (626), Expect = 3e-62
Identities = 119/210 (56%), Positives = 160/210 (76%), Gaps = 2/210 (0%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGAPAE+ LKP+EFPDFMER E+PMYIS+GALGKLYRA + Q +T S
Sbjct: 917 AKTGAPAELSWILKPKEFPDFMERVERPMYISNGALGKLYRAIRSSVVQEQTIVVWSQQR 976
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
+AYD +L V G++SFL+ AE+H+++Y+++M +L+NYY A +E EILTGNL+ ++ YLQ
Sbjct: 977 AEEAYDRELEVQGFESFLEMAESHRDKYIEKMRSLMNYYEATTEDEILTGNLRNRAAYLQ 1036
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC 774
RDNRRY ++KDR+L+S+K L KE KGWF+SSC +EQQ+LASAWY+VTY+ Y NC
Sbjct: 1037 RDNRRYFDLKDRILLSLKTLQKEAKGWFESSCKVSEQQRLASAWYHVTYNLAYFQEDMNC 1096
Query: 773 LGFPWVVGDILMDIKS--AKNGMIVEYSVE 690
L FPW+VGDIL++IKS ++ IV ++E
Sbjct: 1097 LSFPWIVGDILLNIKSLNSRRSRIVTSALE 1126
>gb|EOY20662.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
gi|508773407|gb|EOY20663.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao]
Length = 1149
Score = 244 bits (623), Expect = 6e-62
Identities = 117/200 (58%), Positives = 152/200 (76%), Gaps = 1/200 (0%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGAPAEMPR+LKPREFPDFM+R +KPMY S G LGKLYRAT+ Q ++ S +
Sbjct: 922 AKTGAPAEMPRSLKPREFPDFMQRVDKPMYASLGVLGKLYRATINSTVQERSKFVWSKKM 981
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
YD DL V+G+++FL TA+THK+ Y ++M L+NYY ESE EILTGN++ K+ +LQ
Sbjct: 982 AEALYDHDLEVNGFEAFLSTAQTHKDMYEEKMSFLMNYYEVESEDEILTGNMRNKATFLQ 1041
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGS-KN 777
RDNRRYG++KDR+L+S+KNL +E + F++SC E Q+LASAWY+VTYHP Y S K+
Sbjct: 1042 RDNRRYGDMKDRILLSMKNLQREARERFENSCKVGEHQRLASAWYHVTYHPNYCQESMKS 1101
Query: 776 CLGFPWVVGDILMDIKSAKN 717
CL FPW+VGDIL+ IKS +
Sbjct: 1102 CLSFPWIVGDILLKIKSVNS 1121
>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase,
putative [Ricinus communis]
Length = 983
Score = 244 bits (623), Expect = 6e-62
Identities = 116/207 (56%), Positives = 152/207 (73%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGAPAEMP+ALKP+EFPDFMER +K MYIS G LGKLYR T+ Q ++ ++ I
Sbjct: 764 AKTGAPAEMPKALKPKEFPDFMERIDKKMYISGGVLGKLYRGTLDSTRQQRSKFVWTENI 823
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
YD DL V G++ F++ A +HK+ Y++++ L++YY A+ E EILTGNLQ K+ YLQ
Sbjct: 824 AEATYDHDLEVKGFEEFVEIAISHKDMYVEKLSGLMDYYEAKKEDEILTGNLQNKAMYLQ 883
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEAEQQKLASAWYYVTYHPTYLNGSKNC 774
RDNRRYG+ KDR+L+SVK+L KE K WF+S C E+Q+LASAWY+VTYHP+Y C
Sbjct: 884 RDNRRYGDTKDRILISVKSLQKEAKEWFESCCQAKEKQRLASAWYHVTYHPSYFQEGITC 943
Query: 773 LGFPWVVGDILMDIKSAKNGMIVEYSV 693
L FPW+V DIL++IKSA + + SV
Sbjct: 944 LSFPWIVADILLNIKSANSKNLKTSSV 970
>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 244 bits (622), Expect = 8e-62
Identities = 118/197 (59%), Positives = 145/197 (73%), Gaps = 1/197 (0%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGAPAEMPRALKPREFPDFM+R KPMY S G LGKLYRAT+ QT++ + +
Sbjct: 914 AKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLYRATINSTVQTRSKFVWTKEM 973
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
YD DL V+G++S + AETHKE Y + M L++YY E E EILTGN+ K+ +L
Sbjct: 974 AELVYDHDLEVNGFESLISVAETHKEMYEERMSLLMSYYDVEYEDEILTGNIYNKAQFLL 1033
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEA-EQQKLASAWYYVTYHPTYLNGSKN 777
RDNRRYGE+K+R+++SVK+L +E K WFKSSC +A E QKLASAWYYVTYHP Y N
Sbjct: 1034 RDNRRYGEMKERIVLSVKDLQREAKEWFKSSCSKADEHQKLASAWYYVTYHPNYFQERMN 1093
Query: 776 CLGFPWVVGDILMDIKS 726
L FPW+VGDIL+ +KS
Sbjct: 1094 SLSFPWIVGDILLRVKS 1110
>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 243 bits (621), Expect = 1e-61
Identities = 119/197 (60%), Positives = 145/197 (73%), Gaps = 1/197 (0%)
Frame = -1
Query: 1313 AKTGAPAEMPRALKPREFPDFMERWEKPMYISHGALGKLYRATVQFIHQTKTNADLSDAI 1134
AKTGAPAEMPRALKPREFPDFM+R KPMY S G LGKLYRAT+ Q ++ + +
Sbjct: 914 AKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLYRATINSTVQIRSKFVWTKEM 973
Query: 1133 PSDAYDPDLIVDGYDSFLKTAETHKEQYLDEMGTLLNYYGAESEVEILTGNLQKKSGYLQ 954
AYD DL V+G++S + AETHKE Y + M L++YY E E EILTGN+ K+ +L
Sbjct: 974 AELAYDHDLEVNGFESLISVAETHKEMYEERMSLLMSYYDVEYEDEILTGNMYNKAQFLL 1033
Query: 953 RDNRRYGEVKDRVLVSVKNLVKEVKGWFKSSCDEA-EQQKLASAWYYVTYHPTYLNGSKN 777
RDNRRYGE+K+R+++SVK+L +E K WFKSSC +A E QKLASAWYYVTYHP Y N
Sbjct: 1034 RDNRRYGEMKERIVLSVKDLQREAKEWFKSSCSKADEHQKLASAWYYVTYHPNYFEERMN 1093
Query: 776 CLGFPWVVGDILMDIKS 726
L FPW+VGDIL+ IKS
Sbjct: 1094 SLSFPWIVGDILLRIKS 1110