BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00021895
         (1551 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358794.1| PREDICTED: DNA topoisomerase 3-beta-1-like i...   918   0.0  
ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like i...   918   0.0  
ref|XP_004248022.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   913   0.0  
ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [...   913   0.0  
ref|XP_002321105.1| DNA topoisomerase family protein [Populus tr...   909   0.0  
ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   908   0.0  
gb|EOY05077.1| DNA topoisomerase, type IA, core [Theobroma cacao]     899   0.0  
gb|EMJ26496.1| hypothetical protein PRUPE_ppa001274mg [Prunus pe...   891   0.0  
ref|XP_006492984.1| PREDICTED: DNA topoisomerase 3-beta-1-like i...   884   0.0  
ref|XP_006492982.1| PREDICTED: DNA topoisomerase 3-beta-1-like i...   884   0.0  
ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ric...   880   0.0  
gb|EXB54788.1| DNA topoisomerase 3-beta-1 [Morus notabilis]           871   0.0  
ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   860   0.0  
ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   855   0.0  
ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   855   0.0  
gb|ESW35784.1| hypothetical protein PHAVU_001G264300g [Phaseolus...   852   0.0  
ref|NP_180760.2| DNA topoisomerase, type IA, core [Arabidopsis t...   845   0.0  
ref|NP_001031463.1| DNA topoisomerase, type IA, core [Arabidopsi...   845   0.0  
ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsi...   845   0.0  
dbj|BAD95240.1| putative DNA topoisomerase III beta [Arabidopsis...   840   0.0  

>ref|XP_006358794.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X2 [Solanum
            tuberosum]
          Length = 801

 Score =  918 bits (2372), Expect = 0.0
 Identities = 427/519 (82%), Positives = 471/519 (90%), Gaps = 3/519 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYPSSFD+KGTLGAL  NPV+G Y Q LL++ ++ PR+GTDAGD
Sbjct: 260  RLYTQGFISYPRTESTAYPSSFDFKGTLGALVHNPVFGAYAQKLLTESYNKPRAGTDAGD 319

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITPM SA+E+ LG+DAWKLYQYICQHFLGTLSPDCKY RIK++FESGGE F  VGQ 
Sbjct: 320  HPPITPMRSASEDSLGNDAWKLYQYICQHFLGTLSPDCKYRRIKVEFESGGEQFQCVGQL 379

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
              VKGFTSIMPWLA++E N+P+F  GEKI+IS+ E+DEG+T PPDYL+ESELISLMEK+G
Sbjct: 380  ATVKGFTSIMPWLAISEKNLPEFAVGEKIEISKAELDEGNTSPPDYLTESELISLMEKHG 439

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASISVHINNICERNYVQVQAGRRL PT LGISLIRGYQCID DLCLPDIRSFIEHQ
Sbjct: 440  IGTDASISVHINNICERNYVQVQAGRRLAPTPLGISLIRGYQCIDSDLCLPDIRSFIEHQ 499

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+LVAKGQADH +VV+HV+EQF+ KFSYFVKQI+NMDALFEA+FSPLSDSGR+LSKCGKC
Sbjct: 500  ITLVAKGQADHSMVVQHVLEQFRRKFSYFVKQIDNMDALFEAQFSPLSDSGRLLSKCGKC 559

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMK+IS QP+RLYCGTCEE+YY P  GT+KLYKELTCPLDNFELL+CSMPGPEGK+FP
Sbjct: 560  LRYMKYISTQPARLYCGTCEEVYYVPQKGTVKLYKELTCPLDNFELLLCSMPGPEGKSFP 619

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPEC 291
             CPYC+N PPFEGID  FGA KT  + KLGKG GMPCFLCPH TC HSVI+QGVCACPEC
Sbjct: 620  LCPYCFNCPPFEGIDTFFGAPKTGDSTKLGKGVGMPCFLCPHTTCPHSVIAQGVCACPEC 679

Query: 290  DGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPL 111
             GTLVLDP+SAP+WRLYCNMCNCLVSLPEGAHRISTT+D+CP CDSTIIEVDFNKKTTPL
Sbjct: 680  SGTLVLDPVSAPKWRLYCNMCNCLVSLPEGAHRISTTQDKCPECDSTIIEVDFNKKTTPL 739

Query: 110  KDGATLHVGCILCDELLHSLVEMKHGKSFY---RRGRGR 3
            KDGATLH GCILCDELLHSLVEMKHG+SF    RRGRGR
Sbjct: 740  KDGATLHKGCILCDELLHSLVEMKHGRSFSRHGRRGRGR 778


>ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Solanum
            tuberosum]
          Length = 860

 Score =  918 bits (2372), Expect = 0.0
 Identities = 427/519 (82%), Positives = 471/519 (90%), Gaps = 3/519 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYPSSFD+KGTLGAL  NPV+G Y Q LL++ ++ PR+GTDAGD
Sbjct: 319  RLYTQGFISYPRTESTAYPSSFDFKGTLGALVHNPVFGAYAQKLLTESYNKPRAGTDAGD 378

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITPM SA+E+ LG+DAWKLYQYICQHFLGTLSPDCKY RIK++FESGGE F  VGQ 
Sbjct: 379  HPPITPMRSASEDSLGNDAWKLYQYICQHFLGTLSPDCKYRRIKVEFESGGEQFQCVGQL 438

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
              VKGFTSIMPWLA++E N+P+F  GEKI+IS+ E+DEG+T PPDYL+ESELISLMEK+G
Sbjct: 439  ATVKGFTSIMPWLAISEKNLPEFAVGEKIEISKAELDEGNTSPPDYLTESELISLMEKHG 498

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASISVHINNICERNYVQVQAGRRL PT LGISLIRGYQCID DLCLPDIRSFIEHQ
Sbjct: 499  IGTDASISVHINNICERNYVQVQAGRRLAPTPLGISLIRGYQCIDSDLCLPDIRSFIEHQ 558

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+LVAKGQADH +VV+HV+EQF+ KFSYFVKQI+NMDALFEA+FSPLSDSGR+LSKCGKC
Sbjct: 559  ITLVAKGQADHSMVVQHVLEQFRRKFSYFVKQIDNMDALFEAQFSPLSDSGRLLSKCGKC 618

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMK+IS QP+RLYCGTCEE+YY P  GT+KLYKELTCPLDNFELL+CSMPGPEGK+FP
Sbjct: 619  LRYMKYISTQPARLYCGTCEEVYYVPQKGTVKLYKELTCPLDNFELLLCSMPGPEGKSFP 678

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPEC 291
             CPYC+N PPFEGID  FGA KT  + KLGKG GMPCFLCPH TC HSVI+QGVCACPEC
Sbjct: 679  LCPYCFNCPPFEGIDTFFGAPKTGDSTKLGKGVGMPCFLCPHTTCPHSVIAQGVCACPEC 738

Query: 290  DGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPL 111
             GTLVLDP+SAP+WRLYCNMCNCLVSLPEGAHRISTT+D+CP CDSTIIEVDFNKKTTPL
Sbjct: 739  SGTLVLDPVSAPKWRLYCNMCNCLVSLPEGAHRISTTQDKCPECDSTIIEVDFNKKTTPL 798

Query: 110  KDGATLHVGCILCDELLHSLVEMKHGKSFY---RRGRGR 3
            KDGATLH GCILCDELLHSLVEMKHG+SF    RRGRGR
Sbjct: 799  KDGATLHKGCILCDELLHSLVEMKHGRSFSRHGRRGRGR 837


>ref|XP_004248022.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Solanum lycopersicum]
          Length = 864

 Score =  913 bits (2360), Expect = 0.0
 Identities = 425/519 (81%), Positives = 468/519 (90%), Gaps = 3/519 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYPSSFD+KGTLGAL  NPV+G Y Q LL+D +  PR+GTDAGD
Sbjct: 319  RLYTQGFISYPRTESTAYPSSFDFKGTLGALVHNPVFGAYAQKLLTDNYIKPRAGTDAGD 378

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITPM SA+E+ LG+DAWKLYQYICQHFLGTLSPDCKY RIK++FESGGE F  VGQ 
Sbjct: 379  HPPITPMRSASEDSLGNDAWKLYQYICQHFLGTLSPDCKYRRIKVEFESGGEQFQCVGQL 438

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
              VKGFTSIMPWLA++E N+P+F  GEKI++S++E+DEG T PP YLSESELISLMEK+G
Sbjct: 439  ATVKGFTSIMPWLAISEKNLPEFAVGEKIEVSKVELDEGDTSPPGYLSESELISLMEKHG 498

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASISVHINNICERNYVQVQAGRRL PT LGISLIRGYQCID DLCLPDIRSFIEHQ
Sbjct: 499  IGTDASISVHINNICERNYVQVQAGRRLAPTPLGISLIRGYQCIDSDLCLPDIRSFIEHQ 558

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+LVAKGQADH +VV+HV+EQF+ KFSYFVKQI+NMDALFEA+FSPLSDSGR+LSKCGKC
Sbjct: 559  ITLVAKGQADHSMVVQHVLEQFRRKFSYFVKQIDNMDALFEAQFSPLSDSGRLLSKCGKC 618

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMK+IS QP+RLYCGTCEE+YY P  GT+KLYKELTCPLDNFELL+CSMPGPEGK+FP
Sbjct: 619  LRYMKYISTQPARLYCGTCEEVYYVPQKGTVKLYKELTCPLDNFELLLCSMPGPEGKSFP 678

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPEC 291
             CPYC+N PPFEGID  FGA KT  + KLGKG GMPCFLCPH TC HSVI+QGVCACPEC
Sbjct: 679  LCPYCFNCPPFEGIDTFFGAPKTGDSTKLGKGVGMPCFLCPHTTCPHSVIAQGVCACPEC 738

Query: 290  DGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPL 111
             GTLVLDP+SAP+WRLYCN CNCLVSLPEGAHRISTT+++CP CDSTIIEVDFNKKTTPL
Sbjct: 739  SGTLVLDPVSAPKWRLYCNTCNCLVSLPEGAHRISTTQEKCPECDSTIIEVDFNKKTTPL 798

Query: 110  KDGATLHVGCILCDELLHSLVEMKHGKSFY---RRGRGR 3
            KDGATLH GCILCDELLHSLVEMKHG+SF    RRGRGR
Sbjct: 799  KDGATLHKGCILCDELLHSLVEMKHGRSFSRHGRRGRGR 837


>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
          Length = 894

 Score =  913 bits (2359), Expect = 0.0
 Identities = 421/520 (80%), Positives = 467/520 (89%), Gaps = 4/520 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYPSSFD+K TLG    NP WGDYVQ LL DGFH PRSGTDAGD
Sbjct: 349  RLYTQGFISYPRTESTAYPSSFDFKSTLGMQTNNPTWGDYVQKLLDDGFHRPRSGTDAGD 408

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITPM +A E++LG+DAWKLYQY+CQHF+GT+SPDCKY R K++F  GGE+F  +GQH
Sbjct: 409  HPPITPMRAANEDMLGNDAWKLYQYVCQHFIGTVSPDCKYVRNKVEFSIGGEIFRCIGQH 468

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
            V VKGFTSIMPWLAV E N+PQF +GEKI++S++E+ EG T PPDYLSESELISLMEKNG
Sbjct: 469  VIVKGFTSIMPWLAVNEKNLPQFKKGEKIEVSKVELYEGETSPPDYLSESELISLMEKNG 528

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASI VHINNICERN+VQVQAGR+LVPTALGISLIRGYQCIDPDLCLPDIRSFIE Q
Sbjct: 529  IGTDASIPVHINNICERNFVQVQAGRKLVPTALGISLIRGYQCIDPDLCLPDIRSFIEQQ 588

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+LVAKGQ DH  VV+HV++QFK KF YFVKQIENMDALFEA+FSPL+DSGR LSKCGKC
Sbjct: 589  ITLVAKGQVDHSRVVEHVLQQFKQKFIYFVKQIENMDALFEAQFSPLADSGRALSKCGKC 648

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMK+IS QPSR+YCGTCEE+YY P  GTIKLYKELTCPLDNFELLI S+ GPEGK+FP
Sbjct: 649  LRYMKYISTQPSRMYCGTCEEVYYLPQKGTIKLYKELTCPLDNFELLIFSLAGPEGKSFP 708

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPEC 291
             CPYCYNSPPFEGID LFGATKT+   KLGKGAGMPCFLCPHPTC HS+I+QGVCACPEC
Sbjct: 709  LCPYCYNSPPFEGIDTLFGATKTSSTGKLGKGAGMPCFLCPHPTCPHSLIAQGVCACPEC 768

Query: 290  DGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPL 111
             GTLVLDP+SAP+WRLYCNMCNCLV LP+GAH+ISTT+DRCP C+STI+EVDFNKKTTPL
Sbjct: 769  SGTLVLDPVSAPKWRLYCNMCNCLVYLPQGAHKISTTRDRCPECESTILEVDFNKKTTPL 828

Query: 110  KDGATLHVGCILCDELLHSLVEMKHGKSFYR----RGRGR 3
             DG+TL+ GCILCDELLHSLVEMKHGKSF++    RGRGR
Sbjct: 829  LDGSTLYTGCILCDELLHSLVEMKHGKSFFKRMGSRGRGR 868


>ref|XP_002321105.1| DNA topoisomerase family protein [Populus trichocarpa]
            gi|222861878|gb|EEE99420.1| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 837

 Score =  909 bits (2348), Expect = 0.0
 Identities = 417/512 (81%), Positives = 467/512 (91%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLY QGFISYPRTESTAYPSSFD+KGTLGALA NP+WGDYVQ LLS G+H P+SG DAGD
Sbjct: 294  RLYIQGFISYPRTESTAYPSSFDFKGTLGALANNPMWGDYVQGLLSGGYHKPQSGKDAGD 353

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITPM SA E++LG DAW+LYQY+CQHFLGT+SPDCKYTR K++F  GGE FH +G H
Sbjct: 354  HPPITPMRSANEDMLGRDAWRLYQYVCQHFLGTVSPDCKYTRTKVEFSIGGEFFHCIGLH 413

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
            V VKGFTSIMPWLAV+E N+PQF +G+KI++S++E+ EG T PPDYLSESELISLMEKNG
Sbjct: 414  VTVKGFTSIMPWLAVSEKNLPQFAKGDKIEVSKVELFEGQTVPPDYLSESELISLMEKNG 473

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASISVHINNICERNYVQVQAGR+LVPTALGI+LIRGYQCIDPDLCLPDIR FIE Q
Sbjct: 474  IGTDASISVHINNICERNYVQVQAGRKLVPTALGITLIRGYQCIDPDLCLPDIRGFIEQQ 533

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+LVAKG+ADH  VV+HV+EQFK K+SYFVKQI+NMDALFEA+FSPL+DSGR  SKCGKC
Sbjct: 534  ITLVAKGEADHSCVVQHVLEQFKRKYSYFVKQIDNMDALFEAQFSPLADSGRAFSKCGKC 593

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMK+IS QPSRLYCGTCEE+YY P  GTIKLYKELTCPLDNFELLI +M GPEGK+FP
Sbjct: 594  LRYMKYISSQPSRLYCGTCEEVYYLPQKGTIKLYKELTCPLDNFELLIFAMAGPEGKSFP 653

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPEC 291
             CP CYNSPPFEGID LFGA+KT  +  LGKGAGMPCFLCPHPTC+HS+I+QGVCACPEC
Sbjct: 654  LCPLCYNSPPFEGIDALFGASKTGSSGMLGKGAGMPCFLCPHPTCRHSLIAQGVCACPEC 713

Query: 290  DGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPL 111
            +GTLVLDPISAP+WRLYCNMCNCLV LP+GAHRISTT+++CP CDSTIIEVDFNK TTPL
Sbjct: 714  NGTLVLDPISAPKWRLYCNMCNCLVLLPQGAHRISTTREQCPECDSTIIEVDFNKNTTPL 773

Query: 110  KDGATLHVGCILCDELLHSLVEMKHGKSFYRR 15
            +DGATLHVGCILCD LLHSLVE+KHGKSF++R
Sbjct: 774  EDGATLHVGCILCDNLLHSLVEVKHGKSFFKR 805


>ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Fragaria vesca subsp.
            vesca]
          Length = 862

 Score =  908 bits (2346), Expect = 0.0
 Identities = 417/516 (80%), Positives = 469/516 (90%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYPSSFD+KGTLGA   NPVWG YVQ LLSDG+  PRSGTD GD
Sbjct: 320  RLYTQGFISYPRTESTAYPSSFDFKGTLGAQVNNPVWGSYVQRLLSDGYQKPRSGTDVGD 379

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPP+TP+ SATE++LG+DAW+LY+Y+C+HF+GT+SPDCKY R K++F  GGE+FH VGQ 
Sbjct: 380  HPPVTPLRSATEDMLGNDAWRLYEYVCKHFIGTVSPDCKYVRTKVEFSIGGEIFHCVGQR 439

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
            V VKGFTSIMPWLAV E N+PQF +GEKI+++R+++ EG T PP+YLSESELISLMEKNG
Sbjct: 440  VLVKGFTSIMPWLAVNEKNLPQFTKGEKIEVARVDLHEGMTSPPEYLSESELISLMEKNG 499

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASISVHINNICERNYVQVQAGR+LVPTALGI+LIRGYQCIDPDLCLPDIRSFIE Q
Sbjct: 500  IGTDASISVHINNICERNYVQVQAGRKLVPTALGITLIRGYQCIDPDLCLPDIRSFIEQQ 559

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+LVAKGQADH  VV+HV++QF+ K+SYFVKQIENMDALFEA+FSPL+DSGRVLSKCGKC
Sbjct: 560  ITLVAKGQADHFRVVQHVLQQFRQKYSYFVKQIENMDALFEAQFSPLADSGRVLSKCGKC 619

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMKHIS QPSRLYC TCEE+YY P  GTIKLYKELTCPLDNFELLICSMPGP+GK+F 
Sbjct: 620  LRYMKHISTQPSRLYCNTCEEVYYLPQKGTIKLYKELTCPLDNFELLICSMPGPDGKSFS 679

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPEC 291
             CPYCYNSPPFEGI+ LFGA K+  + KLGKGAGMPCFLCPHPTC+HS+I+QGVCACPEC
Sbjct: 680  LCPYCYNSPPFEGINTLFGAAKSGSSGKLGKGAGMPCFLCPHPTCRHSLITQGVCACPEC 739

Query: 290  DGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPL 111
             GTLVLDP+SAP+WRL CNMCN LV LP+GAH+ISTT DRCP CDSTIIEVDFNKKTTPL
Sbjct: 740  TGTLVLDPVSAPKWRLCCNMCNFLVLLPQGAHQISTTPDRCPECDSTIIEVDFNKKTTPL 799

Query: 110  KDGATLHVGCILCDELLHSLVEMKHGKSFYRRGRGR 3
            +DGATL+ GCILCDELLHSLVEMK+GKSF+R  RGR
Sbjct: 800  EDGATLYSGCILCDELLHSLVEMKYGKSFFRGSRGR 835


>gb|EOY05077.1| DNA topoisomerase, type IA, core [Theobroma cacao]
          Length = 868

 Score =  899 bits (2324), Expect = 0.0
 Identities = 413/520 (79%), Positives = 465/520 (89%), Gaps = 4/520 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYP+SFD+KGTL  +A N +WGDYVQ LL++G+H PRSGTDAGD
Sbjct: 322  RLYTQGFISYPRTESTAYPASFDFKGTLNVIANNSLWGDYVQRLLAEGYHKPRSGTDAGD 381

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITPM SATE+ILG DAW LYQY+CQHF+GT+SPDCKY R K++F  GGE FH +GQH
Sbjct: 382  HPPITPMHSATEDILGKDAWSLYQYVCQHFIGTVSPDCKYVRRKVEFLVGGEYFHCIGQH 441

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
            V  +GFT IMPWLA+ E N+PQF +GEKI++S++E+ EG T PPDYLSESELISLME+N 
Sbjct: 442  VTAQGFTYIMPWLAINEKNLPQFTKGEKIEVSKVELYEGETSPPDYLSESELISLMERNR 501

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASI VHINNICERNYVQVQ GR+LVPTALGI+LIRGYQCIDPDLCLPDIRSFIEHQ
Sbjct: 502  IGTDASIPVHINNICERNYVQVQGGRKLVPTALGITLIRGYQCIDPDLCLPDIRSFIEHQ 561

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+LVAKGQA+H  VV+HV++QFK KFSYFV+QIENMDALFEA+FSPL+DSGR LSKCGKC
Sbjct: 562  ITLVAKGQANHSHVVQHVLQQFKQKFSYFVQQIENMDALFEAQFSPLADSGRALSKCGKC 621

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMK+IS QP RL+CGTCEE+Y+ P  GTIKLYKELTCPLDNFELLI SMPGPEGK+FP
Sbjct: 622  LRYMKYISTQPPRLFCGTCEEVYHLPQKGTIKLYKELTCPLDNFELLIFSMPGPEGKSFP 681

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPEC 291
             CPYCYNSPPFEG+D LFGAT+   + KLGKGAGMPCFLCPHPTC+HSV++QGVCACPEC
Sbjct: 682  LCPYCYNSPPFEGMDTLFGATRIGSSGKLGKGAGMPCFLCPHPTCRHSVVAQGVCACPEC 741

Query: 290  DGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPL 111
             GTLVLDP+SAP+WRLYCN CNCLV LPEGAHRI+TT++RC  CDSTIIEVDFNKKTTPL
Sbjct: 742  SGTLVLDPVSAPKWRLYCNKCNCLVLLPEGAHRIATTRERCAECDSTIIEVDFNKKTTPL 801

Query: 110  KDGATLHVGCILCDELLHSLVEMKHGKSFYR----RGRGR 3
            +DGATLH GCILCDELLHS VE+KHGKSF R    RGRGR
Sbjct: 802  EDGATLHTGCILCDELLHSFVEVKHGKSFSRGLGGRGRGR 841


>gb|EMJ26496.1| hypothetical protein PRUPE_ppa001274mg [Prunus persica]
          Length = 866

 Score =  891 bits (2303), Expect = 0.0
 Identities = 410/518 (79%), Positives = 465/518 (89%), Gaps = 2/518 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYPSSFD++GTLGA   NP WG YVQ LL+DG+  PRSGTD GD
Sbjct: 320  RLYTQGFISYPRTESTAYPSSFDFRGTLGAQVNNPTWGSYVQRLLADGYQKPRSGTDVGD 379

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPP+TP+ SATE++LG+DAW+LY+YIC HF+GT+SPDCKY R K++F  GGE FH VG  
Sbjct: 380  HPPVTPLRSATEDMLGNDAWRLYEYICTHFMGTVSPDCKYVRTKVEFSIGGEFFHCVGHR 439

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
            V VKGFTSIMPWLAV E N+PQF +GEKI++S++++ EG T PPDYLSESELISLMEKNG
Sbjct: 440  VLVKGFTSIMPWLAVTEKNLPQFTKGEKIEVSQVDLHEGMTSPPDYLSESELISLMEKNG 499

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASISVHINNICERNYVQV AGR+L PTALGI+LIRGYQCIDPDLCLPDIRSFIE Q
Sbjct: 500  IGTDASISVHINNICERNYVQVLAGRKLGPTALGITLIRGYQCIDPDLCLPDIRSFIEQQ 559

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+LVAKGQADH  VV+HV++QF+ K+SYFVKQIENMDALFEA+FSPL+DSGRVLSKCGKC
Sbjct: 560  ITLVAKGQADHFRVVQHVLQQFRQKYSYFVKQIENMDALFEAQFSPLADSGRVLSKCGKC 619

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMKHIS QPSRLYC TCEE+YY P  G+IKLYKELTCPLDNFELLI SMPGP+GK+FP
Sbjct: 620  LRYMKHISTQPSRLYCNTCEEVYYLPQKGSIKLYKELTCPLDNFELLIFSMPGPDGKSFP 679

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPEC 291
             CPYCYNSPPFEGID LFGA K+  + +LGKGAGMPCFLCPHPTC+HS+I+QGVCACPEC
Sbjct: 680  LCPYCYNSPPFEGIDTLFGAVKSGPSSQLGKGAGMPCFLCPHPTCRHSLIAQGVCACPEC 739

Query: 290  DGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPL 111
             GTLVLDP+SAP+WRL CNMCN LV LPEGAH+ISTT++RCP CDSTI+EVDFNKKTTPL
Sbjct: 740  SGTLVLDPVSAPKWRLCCNMCNFLVLLPEGAHQISTTRERCPECDSTILEVDFNKKTTPL 799

Query: 110  KDGATLHVGCILCDELLHSLVEMKHGKSFYRR--GRGR 3
            ++G TL+ GCILCDELLHSLVEMK+GKSF++R  GRGR
Sbjct: 800  ENGETLYTGCILCDELLHSLVEMKYGKSFFKRLGGRGR 837


>ref|XP_006492984.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X3 [Citrus
            sinensis]
          Length = 867

 Score =  884 bits (2284), Expect = 0.0
 Identities = 405/518 (78%), Positives = 462/518 (89%), Gaps = 2/518 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYPSSFD++GTL ALA NPVWGDYV+ LL++G+  PRSGTDAGD
Sbjct: 321  RLYTQGFISYPRTESTAYPSSFDFRGTLSALANNPVWGDYVERLLAEGYAKPRSGTDAGD 380

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITPM SATE++LG DAW+LY Y+CQHFLGT+SPDCKY R K+ F  G E FH VGQH
Sbjct: 381  HPPITPMRSATEDMLGKDAWRLYSYVCQHFLGTVSPDCKYIRTKVKFSMGAEFFHCVGQH 440

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
            V V+GFT IMPWLA+ E  IPQF + EKI++S++E+ EG+T PP+YLSESELI+LMEKNG
Sbjct: 441  VTVQGFTYIMPWLAINEKKIPQFTKEEKIEVSKVELHEGNTVPPEYLSESELITLMEKNG 500

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASI VHINNICERNYVQVQAGR+L PT LGI+LIRGYQCIDPDLCLPDIRSFIE Q
Sbjct: 501  IGTDASIPVHINNICERNYVQVQAGRKLAPTTLGITLIRGYQCIDPDLCLPDIRSFIEQQ 560

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+LVAKGQADH  VV+HV++QF+ K+SYFVKQIENMDALFEA+FSPLS+SGRVLSKCGKC
Sbjct: 561  ITLVAKGQADHSGVVQHVLQQFRQKYSYFVKQIENMDALFEAQFSPLSNSGRVLSKCGKC 620

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMK+IS QPSRLYC TCE++Y  P  GT+KLYKELTCPLDNFELLI SM GPEGK+FP
Sbjct: 621  LRYMKYISMQPSRLYCSTCEDVYNLPQRGTLKLYKELTCPLDNFELLIFSMAGPEGKSFP 680

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPEC 291
             CP+CYN+PPFEGID L+G T T    KLGKGAGMPCFLCPHP C+HS+I+QGVCACPEC
Sbjct: 681  LCPFCYNNPPFEGIDTLYGTTTTGSFGKLGKGAGMPCFLCPHPACRHSMIAQGVCACPEC 740

Query: 290  DGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPL 111
            +GTLVLDP+SAP+WRLYCNMCNCLVSLP+GAHRI+TT+++CP C S IIE+DFNKKTTPL
Sbjct: 741  NGTLVLDPVSAPKWRLYCNMCNCLVSLPQGAHRIATTQEQCPECGSKIIEIDFNKKTTPL 800

Query: 110  KDGATLHVGCILCDELLHSLVEMKHGKSFYRR--GRGR 3
             DGATLH GCILCDELLHSL+E+KHGKSF++R  GRGR
Sbjct: 801  DDGATLHTGCILCDELLHSLIEVKHGKSFFKRLGGRGR 838


>ref|XP_006492982.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Citrus
            sinensis] gi|568880120|ref|XP_006492983.1| PREDICTED: DNA
            topoisomerase 3-beta-1-like isoform X2 [Citrus sinensis]
          Length = 898

 Score =  884 bits (2284), Expect = 0.0
 Identities = 405/518 (78%), Positives = 462/518 (89%), Gaps = 2/518 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYPSSFD++GTL ALA NPVWGDYV+ LL++G+  PRSGTDAGD
Sbjct: 352  RLYTQGFISYPRTESTAYPSSFDFRGTLSALANNPVWGDYVERLLAEGYAKPRSGTDAGD 411

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITPM SATE++LG DAW+LY Y+CQHFLGT+SPDCKY R K+ F  G E FH VGQH
Sbjct: 412  HPPITPMRSATEDMLGKDAWRLYSYVCQHFLGTVSPDCKYIRTKVKFSMGAEFFHCVGQH 471

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
            V V+GFT IMPWLA+ E  IPQF + EKI++S++E+ EG+T PP+YLSESELI+LMEKNG
Sbjct: 472  VTVQGFTYIMPWLAINEKKIPQFTKEEKIEVSKVELHEGNTVPPEYLSESELITLMEKNG 531

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASI VHINNICERNYVQVQAGR+L PT LGI+LIRGYQCIDPDLCLPDIRSFIE Q
Sbjct: 532  IGTDASIPVHINNICERNYVQVQAGRKLAPTTLGITLIRGYQCIDPDLCLPDIRSFIEQQ 591

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+LVAKGQADH  VV+HV++QF+ K+SYFVKQIENMDALFEA+FSPLS+SGRVLSKCGKC
Sbjct: 592  ITLVAKGQADHSGVVQHVLQQFRQKYSYFVKQIENMDALFEAQFSPLSNSGRVLSKCGKC 651

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMK+IS QPSRLYC TCE++Y  P  GT+KLYKELTCPLDNFELLI SM GPEGK+FP
Sbjct: 652  LRYMKYISMQPSRLYCSTCEDVYNLPQRGTLKLYKELTCPLDNFELLIFSMAGPEGKSFP 711

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPEC 291
             CP+CYN+PPFEGID L+G T T    KLGKGAGMPCFLCPHP C+HS+I+QGVCACPEC
Sbjct: 712  LCPFCYNNPPFEGIDTLYGTTTTGSFGKLGKGAGMPCFLCPHPACRHSMIAQGVCACPEC 771

Query: 290  DGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPL 111
            +GTLVLDP+SAP+WRLYCNMCNCLVSLP+GAHRI+TT+++CP C S IIE+DFNKKTTPL
Sbjct: 772  NGTLVLDPVSAPKWRLYCNMCNCLVSLPQGAHRIATTQEQCPECGSKIIEIDFNKKTTPL 831

Query: 110  KDGATLHVGCILCDELLHSLVEMKHGKSFYRR--GRGR 3
             DGATLH GCILCDELLHSL+E+KHGKSF++R  GRGR
Sbjct: 832  DDGATLHTGCILCDELLHSLIEVKHGKSFFKRLGGRGR 869


>ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223544485|gb|EEF46004.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 865

 Score =  880 bits (2273), Expect = 0.0
 Identities = 404/517 (78%), Positives = 456/517 (88%), Gaps = 1/517 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYPSSFD+K  L  L  N +WGD V+ LL +G+H PR GTDAGD
Sbjct: 321  RLYTQGFISYPRTESTAYPSSFDFKSILSTLLNNSIWGDSVRRLLVEGYHKPRLGTDAGD 380

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITP+  ATE++LG DAW+LYQY+CQHF+G++SPDCKY R K++F  GGE FH +GQH
Sbjct: 381  HPPITPIRLATEDMLGKDAWRLYQYVCQHFIGSVSPDCKYVRTKVEFSVGGEFFHCIGQH 440

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
            V V+GFTSIMPWLAV E N+PQ  +GEKI++ R+E+ EG T PPDYL+ESELISLMEKNG
Sbjct: 441  VIVEGFTSIMPWLAVTEKNLPQLVKGEKIEVLRMELLEGKTTPPDYLTESELISLMEKNG 500

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASI VHINNICERNYVQVQAGRRL PT LGI+LIRGYQCIDPDLCLPDIRSFIE Q
Sbjct: 501  IGTDASIPVHINNICERNYVQVQAGRRLAPTILGITLIRGYQCIDPDLCLPDIRSFIEQQ 560

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+LVAKGQADH  VV+HV++QFK KF+YFVKQI+NMDALFEA+FS L DSGR LSKCGKC
Sbjct: 561  ITLVAKGQADHSRVVQHVLQQFKQKFTYFVKQIDNMDALFEAQFSQLVDSGRALSKCGKC 620

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMK+IS QP RLYCGTCEE+YY P  GTIKLYKELTCPLDNFELLI SM GPEGK FP
Sbjct: 621  LRYMKYISTQPPRLYCGTCEEVYYLPQKGTIKLYKELTCPLDNFELLIFSMAGPEGKTFP 680

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPEC 291
             CPYCYN+PPFEG+D LFGA+K     KLGKGAGMPCFLCPHPTC+HS+I+QGVCACPEC
Sbjct: 681  LCPYCYNNPPFEGVDTLFGASKNGNFGKLGKGAGMPCFLCPHPTCRHSLIAQGVCACPEC 740

Query: 290  DGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPL 111
             GTLVLDP+SAP+WRLYCNMCNCLV LP+GAHRI+TT++RCP CDSTIIEVDFNK TTPL
Sbjct: 741  SGTLVLDPVSAPKWRLYCNMCNCLVLLPQGAHRIATTRERCPECDSTIIEVDFNKNTTPL 800

Query: 110  KDGATLHVGCILCDELLHSLVEMKHGKSFYRR-GRGR 3
            +DGATLH+GCILCD+LLHSLVE+KHGKSF++R G GR
Sbjct: 801  EDGATLHIGCILCDDLLHSLVEVKHGKSFFKRLGAGR 837


>gb|EXB54788.1| DNA topoisomerase 3-beta-1 [Morus notabilis]
          Length = 641

 Score =  871 bits (2250), Expect = 0.0
 Identities = 402/520 (77%), Positives = 457/520 (87%), Gaps = 4/520 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYT+GFISYPRTESTAYPSSFD+KGTLG LA NP WGD+V+ LL+ G+  PR GTDAGD
Sbjct: 95   RLYTRGFISYPRTESTAYPSSFDFKGTLGELAYNPTWGDFVRTLLARGYQKPRVGTDAGD 154

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITPM SATE++L +D+W LY+Y+CQHF+GTLSPDCKY+R K+ F  GGE FH VG  
Sbjct: 155  HPPITPMLSATEDMLDNDSWGLYKYVCQHFIGTLSPDCKYSRTKVVFSIGGESFHCVGHR 214

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
            +  KGFTSIMPWLA+ E N+PQF +GEKI++ R+E+ EG+T PPDYLSESELIS MEK G
Sbjct: 215  ILEKGFTSIMPWLAINEKNLPQFRKGEKIEVMRVELYEGNTTPPDYLSESELISFMEKYG 274

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASI VH+NNICERNYV+VQAGR+LVPT LGI+LIRGYQCIDPDLCLPDIRSFIE Q
Sbjct: 275  IGTDASIPVHVNNICERNYVKVQAGRKLVPTPLGITLIRGYQCIDPDLCLPDIRSFIEQQ 334

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            ++LVAKGQADH  V++HV++QFK KFSYFVKQI+ MDALFEA+FSP+++SGRVLSKCGKC
Sbjct: 335  LTLVAKGQADHICVLQHVLQQFKQKFSYFVKQIDKMDALFEAQFSPVANSGRVLSKCGKC 394

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMK+IS QPSRLYC TCEEIYY P  GTIKLYKELTCPLDNFELLI S PGPEGK+FP
Sbjct: 395  LRYMKYISSQPSRLYCNTCEEIYYLPQKGTIKLYKELTCPLDNFELLIFSRPGPEGKSFP 454

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPEC 291
             CPYCYN+PPFEGID LFG  KT    KLG+G GMPC LCPHPTCQHS+I+QGVCACPEC
Sbjct: 455  LCPYCYNTPPFEGIDTLFGGAKTGSLNKLGEGVGMPCSLCPHPTCQHSMITQGVCACPEC 514

Query: 290  DGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPL 111
             GTLVLDP+SAP+WRL CN CNCLV LP+GAHRISTT+D+CP+CDSTIIEVDFNKKTTPL
Sbjct: 515  SGTLVLDPVSAPKWRLNCNTCNCLVFLPQGAHRISTTRDQCPDCDSTIIEVDFNKKTTPL 574

Query: 110  KDGATLHVGCILCDELLHSLVEMKHGKSFYR----RGRGR 3
            +DGATL+ GCILCDE LHSL+EMKHGKSF+R    RGRGR
Sbjct: 575  EDGATLYTGCILCDEFLHSLLEMKHGKSFFRRLSSRGRGR 614


>ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Glycine max]
          Length = 863

 Score =  860 bits (2221), Expect = 0.0
 Identities = 398/519 (76%), Positives = 452/519 (87%), Gaps = 3/519 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYP SFD++G L A   NP WG+YVQ LL++G+  PR GTD GD
Sbjct: 319  RLYTQGFISYPRTESTAYPPSFDFRGVLSAQTNNPTWGNYVQGLLTNGYQKPRLGTDVGD 378

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITPM SA E++LG+DAWKLYQYICQHF+GT+SPDCKY R K++F  GGE FH  GQH
Sbjct: 379  HPPITPMRSAAEDMLGNDAWKLYQYICQHFIGTVSPDCKYIRRKVEFSIGGESFHCTGQH 438

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
            V  KGFT+IMPWLA+ + NIP F +G+KI++S++E+ EGST PPD+L+ESELISLMEKNG
Sbjct: 439  VVTKGFTAIMPWLAINDKNIPSFIKGQKIEVSKLELYEGSTSPPDFLTESELISLMEKNG 498

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASI VHINNICERNYVQVQAGR+LVPT LGI+L+RGYQ IDPDLCLPDIRSFIE Q
Sbjct: 499  IGTDASIPVHINNICERNYVQVQAGRKLVPTTLGITLVRGYQTIDPDLCLPDIRSFIEQQ 558

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+L+AKGQ DH  VV+HVI+QF  KFSYFVK+IE+MDALFEA+FS L+DSGR+LSKCGKC
Sbjct: 559  ITLIAKGQVDHRHVVQHVIQQFTQKFSYFVKKIEDMDALFEAQFSTLTDSGRILSKCGKC 618

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMK IS QPSRLYCGTCEE+YY P  GTIKLYKEL+CPLDNFELLICSMPGP+GK+FP
Sbjct: 619  LRYMKFISTQPSRLYCGTCEEVYYLPQKGTIKLYKELSCPLDNFELLICSMPGPDGKSFP 678

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPEC 291
             CPYCY +PPFEGI+ L    KT  + K+GKGAGMPC LCPHPTC +S++SQGVCACPEC
Sbjct: 679  LCPYCYINPPFEGIETLINTAKTGTSGKIGKGAGMPCNLCPHPTCPNSLVSQGVCACPEC 738

Query: 290  DGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPL 111
             GTLVLDP+SAPRW+L CNMCNCLV L +GAHRISTTKDRCP CDS+IIEVDFNKKTTPL
Sbjct: 739  SGTLVLDPVSAPRWKLCCNMCNCLVFLAQGAHRISTTKDRCPECDSSIIEVDFNKKTTPL 798

Query: 110  KDGATLHVGCILCDELLHSLVEMKHGKSFYR---RGRGR 3
            +DGATLH GCILCDELLHSLVEMKHG+SF     RGRGR
Sbjct: 799  EDGATLHHGCILCDELLHSLVEMKHGRSFRHMSSRGRGR 837


>ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
          Length = 864

 Score =  855 bits (2208), Expect = 0.0
 Identities = 399/521 (76%), Positives = 453/521 (86%), Gaps = 5/521 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYPSSFD+KGTL  L +NP WGDYV+ LLSDG+  PRSGTD GD
Sbjct: 318  RLYTQGFISYPRTESTAYPSSFDFKGTLHTLVKNPEWGDYVRMLLSDGYSKPRSGTDVGD 377

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITPMC ATE++LG DAW+LYQY+CQHF+G+LS DCKY R KI F   GE+F+  G  
Sbjct: 378  HPPITPMCLATEDMLGRDAWRLYQYVCQHFIGSLSSDCKYIRTKIQFSIAGEIFNCTGSR 437

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
            V VKGFTSIMPWLAV E  +PQF +GEKI+++R+++ +G+T PPDYLSESELISLMEK+G
Sbjct: 438  VTVKGFTSIMPWLAVNEKKLPQFLKGEKIEVARVDLYQGNTTPPDYLSESELISLMEKHG 497

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASI VHINNI ERNYVQVQAGRRLVPT LGI+LIRGYQCIDPDLCLPDIRSFIEHQ
Sbjct: 498  IGTDASIPVHINNIGERNYVQVQAGRRLVPTNLGITLIRGYQCIDPDLCLPDIRSFIEHQ 557

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+LVAKGQADH  VV+ V++QF+ K+SYFVK+I++MDALFEA+FSPL+DSGR LSKCGKC
Sbjct: 558  ITLVAKGQADHSSVVQSVLQQFRQKYSYFVKKIDHMDALFEAQFSPLADSGRALSKCGKC 617

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMK IS QP RLYCG CEE+YY P  GTIKLYKELTCPLDNFELLI S+PGPEGK+FP
Sbjct: 618  LRYMKFISSQPQRLYCGICEEVYYLPQKGTIKLYKELTCPLDNFELLIYSLPGPEGKSFP 677

Query: 470  FCPYCYNSPPFEGIDNLFGATK-TAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPE 294
             CPYCYNSPPFEGI+ L+GA+K    +    KG GMPCF+CPHPTC+HS+I+QGVCACPE
Sbjct: 678  LCPYCYNSPPFEGINTLYGASKANPSSGTSSKGMGMPCFMCPHPTCRHSLITQGVCACPE 737

Query: 293  CDGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTP 114
            C GTLVLDP+SAP W+L CN CNCLV LP+GAHRISTT+D+C +CDSTIIEVDFNKKTTP
Sbjct: 738  CSGTLVLDPVSAPNWKLNCNKCNCLVFLPKGAHRISTTRDKCADCDSTIIEVDFNKKTTP 797

Query: 113  LKDGATLHVGCILCDELLHSLVEMKHGKSFYR----RGRGR 3
            L+DGATL VGCILCDE LHSL+EMKHGKSF R    RGRGR
Sbjct: 798  LEDGATLFVGCILCDEFLHSLLEMKHGKSFIRNRGSRGRGR 838


>ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
          Length = 867

 Score =  855 bits (2208), Expect = 0.0
 Identities = 399/521 (76%), Positives = 453/521 (86%), Gaps = 5/521 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYPSSFD+KGTL  L +NP WGDYV+ LLSDG+  PRSGTD GD
Sbjct: 321  RLYTQGFISYPRTESTAYPSSFDFKGTLHTLVKNPEWGDYVRMLLSDGYSKPRSGTDVGD 380

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITPMC ATE++LG DAW+LYQY+CQHF+G+LS DCKY R KI F   GE+F+  G  
Sbjct: 381  HPPITPMCLATEDMLGRDAWRLYQYVCQHFIGSLSSDCKYIRTKIQFSIAGEIFNCTGSR 440

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
            V VKGFTSIMPWLAV E  +PQF +GEKI+++R+++ +G+T PPDYLSESELISLMEK+G
Sbjct: 441  VTVKGFTSIMPWLAVNEKKLPQFLKGEKIEVARVDLYQGNTTPPDYLSESELISLMEKHG 500

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASI VHINNI ERNYVQVQAGRRLVPT LGI+LIRGYQCIDPDLCLPDIRSFIEHQ
Sbjct: 501  IGTDASIPVHINNIGERNYVQVQAGRRLVPTNLGITLIRGYQCIDPDLCLPDIRSFIEHQ 560

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+LVAKGQADH  VV+ V++QF+ K+SYFVK+I++MDALFEA+FSPL+DSGR LSKCGKC
Sbjct: 561  ITLVAKGQADHSSVVQSVLQQFRQKYSYFVKKIDHMDALFEAQFSPLADSGRALSKCGKC 620

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMK IS QP RLYCG CEE+YY P  GTIKLYKELTCPLDNFELLI S+PGPEGK+FP
Sbjct: 621  LRYMKFISSQPQRLYCGICEEVYYLPQKGTIKLYKELTCPLDNFELLIYSLPGPEGKSFP 680

Query: 470  FCPYCYNSPPFEGIDNLFGATK-TAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPE 294
             CPYCYNSPPFEGI+ L+GA+K    +    KG GMPCF+CPHPTC+HS+I+QGVCACPE
Sbjct: 681  LCPYCYNSPPFEGINTLYGASKANPSSGTSSKGMGMPCFMCPHPTCRHSLITQGVCACPE 740

Query: 293  CDGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTP 114
            C GTLVLDP+SAP W+L CN CNCLV LP+GAHRISTT+D+C +CDSTIIEVDFNKKTTP
Sbjct: 741  CSGTLVLDPVSAPNWKLNCNKCNCLVFLPKGAHRISTTRDKCADCDSTIIEVDFNKKTTP 800

Query: 113  LKDGATLHVGCILCDELLHSLVEMKHGKSFYR----RGRGR 3
            L+DGATL VGCILCDE LHSL+EMKHGKSF R    RGRGR
Sbjct: 801  LEDGATLFVGCILCDEFLHSLLEMKHGKSFIRNRGSRGRGR 841


>gb|ESW35784.1| hypothetical protein PHAVU_001G264300g [Phaseolus vulgaris]
          Length = 862

 Score =  852 bits (2202), Expect = 0.0
 Identities = 396/519 (76%), Positives = 450/519 (86%), Gaps = 3/519 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYP SFD+ G L A   NP WG+YVQ LL+ G+  PR GTD GD
Sbjct: 319  RLYTQGFISYPRTESTAYPPSFDFLGVLSAQKNNPTWGNYVQGLLTAGYQKPRLGTDVGD 378

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITPM SA E++LG+DAWKLYQYICQHF+GT+SPDCKY R K++F  GGE FH  GQH
Sbjct: 379  HPPITPMRSAAEDMLGNDAWKLYQYICQHFIGTVSPDCKYIRRKVEFSIGGESFHCTGQH 438

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
            V  KGFT+IMPWLA+ + NIP F +G+KI++S++E+ EG T PPDYL+ESELISLMEKNG
Sbjct: 439  VVTKGFTAIMPWLALNDKNIPSFVKGQKIEVSKLELYEGITSPPDYLTESELISLMEKNG 498

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASI VHINNICERNYVQVQAGR+LVPT LGI+L+RGYQ IDPDLCLPDIRSFIE Q
Sbjct: 499  IGTDASIPVHINNICERNYVQVQAGRKLVPTPLGITLVRGYQTIDPDLCLPDIRSFIEQQ 558

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+L+AKGQ DH  VV+HVI+QF  KFSYFVK+IE+MDALFEA+FS L++SGR+LSKCGKC
Sbjct: 559  ITLIAKGQVDHRHVVQHVIQQFTQKFSYFVKKIEDMDALFEAQFSTLTESGRILSKCGKC 618

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMK+IS QP RLYCGTCEE+YY P  G IKLYKEL+CPLDNFELLICSMPGP+GK+FP
Sbjct: 619  LRYMKYISTQPPRLYCGTCEEVYYLPQKGIIKLYKELSCPLDNFELLICSMPGPDGKSFP 678

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGAIKLGKGAGMPCFLCPHPTCQHSVISQGVCACPEC 291
             CPYCY++PPFEGI+ L   TKT  A K+GKG+GMPC LCPHP+C +S++SQGVCACPEC
Sbjct: 679  LCPYCYSNPPFEGIEALINTTKTGSAGKIGKGSGMPCSLCPHPSCPNSLVSQGVCACPEC 738

Query: 290  DGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTPL 111
             GTLVLDPISAPRWRL CNMCNCLV L +GAHRISTTK+RCP CDS+IIEVDFNKKTTPL
Sbjct: 739  SGTLVLDPISAPRWRLCCNMCNCLVFLAQGAHRISTTKERCPECDSSIIEVDFNKKTTPL 798

Query: 110  KDGATLHVGCILCDELLHSLVEMKHGKSFYR---RGRGR 3
            +DGATLH GCILCDELLHSLVEMKHG+SF     RGRGR
Sbjct: 799  EDGATLHRGCILCDELLHSLVEMKHGRSFRHMGSRGRGR 837


>ref|NP_180760.2| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
            gi|330253525|gb|AEC08619.1| DNA topoisomerase, type IA,
            core [Arabidopsis thaliana]
          Length = 865

 Score =  845 bits (2184), Expect = 0.0
 Identities = 393/518 (75%), Positives = 452/518 (87%), Gaps = 2/518 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYPSSFD+  TL A   NPVWG YVQ LLSDGFH P+SGTDAGD
Sbjct: 322  RLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGGYVQRLLSDGFHMPKSGTDAGD 381

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITPM +ATE ++G DAW+LYQY+CQHFLGT+SP+CKY R K++   GGE FH  GQ 
Sbjct: 382  HPPITPMRAATEVMVGGDAWRLYQYVCQHFLGTVSPNCKYIRTKVELSIGGETFHCTGQR 441

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
            V  KGFT+IMPW AV E  +P F +GE+I++ R+E+ EG+T PPDYL+ESELISLMEK+G
Sbjct: 442  VTEKGFTAIMPWSAVDEKKLPSFLKGERIEVLRVELYEGNTAPPDYLTESELISLMEKHG 501

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASI+VHINNI ERNYVQVQ+GR++VPTALGI+LIRGYQCIDPDLCLPDIRSFIE Q
Sbjct: 502  IGTDASIAVHINNIGERNYVQVQSGRKMVPTALGITLIRGYQCIDPDLCLPDIRSFIEQQ 561

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+LVAKGQADH  VV+HVI+QF+ KFSYFV+QIE+MDALFEA+FSPL+DSGR LSKCGKC
Sbjct: 562  ITLVAKGQADHSHVVQHVIQQFRRKFSYFVQQIEHMDALFEAQFSPLADSGRALSKCGKC 621

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMKHI+  P RL+CGTCEE+YY P  GT+KLYKELTCPLDNFEL+I S+PGPEGK+FP
Sbjct: 622  LRYMKHITAVPPRLFCGTCEEVYYLPQKGTVKLYKELTCPLDNFELVIYSVPGPEGKSFP 681

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGA-IKLGKGAGMPCFLCPHPTCQHSVISQGVCACPE 294
             CPYCYNSPPFEGID LFGA+KT  A  K   GAGMPC LCPHPTCQHSV +QGVCACPE
Sbjct: 682  LCPYCYNSPPFEGIDTLFGASKTPNAPAKTKTGAGMPCSLCPHPTCQHSVRNQGVCACPE 741

Query: 293  CDGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTP 114
            C+GTLVLDP+S P+W+L CN+C+C+V LPEGAHRI+TT +RCP CDS IIE+DFNKKTTP
Sbjct: 742  CEGTLVLDPVSFPKWKLNCNLCSCIVLLPEGAHRITTTSNRCPECDSAIIEIDFNKKTTP 801

Query: 113  LKDGATLHVGCILCDELLHSLVEMKHGKSFYRR-GRGR 3
            L++GATLH GC+LCDELL SLVE+KHG+SF RR GRGR
Sbjct: 802  LENGATLHQGCVLCDELLLSLVEVKHGRSFVRRGGRGR 839


>ref|NP_001031463.1| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
            gi|51969720|dbj|BAD43552.1| putative DNA topoisomerase
            III beta [Arabidopsis thaliana]
            gi|51969988|dbj|BAD43686.1| putative DNA topoisomerase
            III beta [Arabidopsis thaliana]
            gi|330253526|gb|AEC08620.1| DNA topoisomerase, type IA,
            core [Arabidopsis thaliana]
          Length = 838

 Score =  845 bits (2184), Expect = 0.0
 Identities = 393/518 (75%), Positives = 452/518 (87%), Gaps = 2/518 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYPSSFD+  TL A   NPVWG YVQ LLSDGFH P+SGTDAGD
Sbjct: 295  RLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGGYVQRLLSDGFHMPKSGTDAGD 354

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITPM +ATE ++G DAW+LYQY+CQHFLGT+SP+CKY R K++   GGE FH  GQ 
Sbjct: 355  HPPITPMRAATEVMVGGDAWRLYQYVCQHFLGTVSPNCKYIRTKVELSIGGETFHCTGQR 414

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
            V  KGFT+IMPW AV E  +P F +GE+I++ R+E+ EG+T PPDYL+ESELISLMEK+G
Sbjct: 415  VTEKGFTAIMPWSAVDEKKLPSFLKGERIEVLRVELYEGNTAPPDYLTESELISLMEKHG 474

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASI+VHINNI ERNYVQVQ+GR++VPTALGI+LIRGYQCIDPDLCLPDIRSFIE Q
Sbjct: 475  IGTDASIAVHINNIGERNYVQVQSGRKMVPTALGITLIRGYQCIDPDLCLPDIRSFIEQQ 534

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+LVAKGQADH  VV+HVI+QF+ KFSYFV+QIE+MDALFEA+FSPL+DSGR LSKCGKC
Sbjct: 535  ITLVAKGQADHSHVVQHVIQQFRRKFSYFVQQIEHMDALFEAQFSPLADSGRALSKCGKC 594

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMKHI+  P RL+CGTCEE+YY P  GT+KLYKELTCPLDNFEL+I S+PGPEGK+FP
Sbjct: 595  LRYMKHITAVPPRLFCGTCEEVYYLPQKGTVKLYKELTCPLDNFELVIYSVPGPEGKSFP 654

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGA-IKLGKGAGMPCFLCPHPTCQHSVISQGVCACPE 294
             CPYCYNSPPFEGID LFGA+KT  A  K   GAGMPC LCPHPTCQHSV +QGVCACPE
Sbjct: 655  LCPYCYNSPPFEGIDTLFGASKTPNAPAKTKTGAGMPCSLCPHPTCQHSVRNQGVCACPE 714

Query: 293  CDGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTP 114
            C+GTLVLDP+S P+W+L CN+C+C+V LPEGAHRI+TT +RCP CDS IIE+DFNKKTTP
Sbjct: 715  CEGTLVLDPVSFPKWKLNCNLCSCIVLLPEGAHRITTTSNRCPECDSAIIEIDFNKKTTP 774

Query: 113  LKDGATLHVGCILCDELLHSLVEMKHGKSFYRR-GRGR 3
            L++GATLH GC+LCDELL SLVE+KHG+SF RR GRGR
Sbjct: 775  LENGATLHQGCVLCDELLLSLVEVKHGRSFVRRGGRGR 812


>ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297327049|gb|EFH57469.1| DNA topoisomerase family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 865

 Score =  845 bits (2183), Expect = 0.0
 Identities = 394/518 (76%), Positives = 451/518 (87%), Gaps = 2/518 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYPSSFD+  TL A   NPVWG YVQ LLSDGFH P+SGTDAGD
Sbjct: 322  RLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGGYVQRLLSDGFHKPKSGTDAGD 381

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITPM +ATE ++G DAW+LYQY+CQHF+GT+SP+CKY R K++   GGE FH  GQ 
Sbjct: 382  HPPITPMRAATEVMVGGDAWRLYQYVCQHFIGTVSPNCKYIRTKVELSIGGETFHCTGQR 441

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
            V  KGFT+IMPW AV E  +P F +GE+I++ R+E+ EG+T PPDYL+ESELISLMEK+G
Sbjct: 442  VTEKGFTAIMPWSAVDEKKLPSFLKGERIEVIRVELYEGNTAPPDYLTESELISLMEKHG 501

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASI VHINNI ERNYVQVQAGR+LVPTALGI+LIRGYQCIDPDLCLPDIRSFIE Q
Sbjct: 502  IGTDASIPVHINNIGERNYVQVQAGRKLVPTALGITLIRGYQCIDPDLCLPDIRSFIEQQ 561

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+LVAKGQADH  VV+HVI+QF+ KFSYFV+QIE+MDALFEA+FSPL+DSGR LSKCGKC
Sbjct: 562  ITLVAKGQADHSHVVQHVIQQFRRKFSYFVQQIEHMDALFEAQFSPLADSGRALSKCGKC 621

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMKHI+  P RL+CGTCEE+YY P  GTIKLYKELTCPLDNFEL+I S+PGPEGK+FP
Sbjct: 622  LRYMKHITAVPPRLFCGTCEEVYYLPQKGTIKLYKELTCPLDNFELVIYSVPGPEGKSFP 681

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGA-IKLGKGAGMPCFLCPHPTCQHSVISQGVCACPE 294
             CPYCYNSPPFEGID LFGA+KT  A  K   G+GMPC LCPHPTCQHSV +QGVCACPE
Sbjct: 682  LCPYCYNSPPFEGIDTLFGASKTPNAPAKTKTGSGMPCSLCPHPTCQHSVRNQGVCACPE 741

Query: 293  CDGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTP 114
            C+GTLVLDP+S P+W+L CN+C+C+V LPEGAHRI+TT +RCP CDS IIE+DFNKKTTP
Sbjct: 742  CEGTLVLDPVSFPKWKLNCNLCSCIVLLPEGAHRIATTSNRCPECDSAIIEIDFNKKTTP 801

Query: 113  LKDGATLHVGCILCDELLHSLVEMKHGKSFYRR-GRGR 3
            L++GATLH GC+LCDELL SLVE+KHG+SF RR GRGR
Sbjct: 802  LENGATLHQGCVLCDELLLSLVEVKHGRSFVRRGGRGR 839


>dbj|BAD95240.1| putative DNA topoisomerase III beta [Arabidopsis thaliana]
          Length = 865

 Score =  840 bits (2169), Expect = 0.0
 Identities = 391/518 (75%), Positives = 450/518 (86%), Gaps = 2/518 (0%)
 Frame = -2

Query: 1550 RLYTQGFISYPRTESTAYPSSFDYKGTLGALARNPVWGDYVQHLLSDGFHTPRSGTDAGD 1371
            RLYTQGFISYPRTESTAYPSSFD+  TL A   NPVWG YVQ LLSDGFH P+SGTDAGD
Sbjct: 322  RLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGGYVQRLLSDGFHMPKSGTDAGD 381

Query: 1370 HPPITPMCSATENILGHDAWKLYQYICQHFLGTLSPDCKYTRIKIDFESGGELFHYVGQH 1191
            HPPITPM +ATE ++G  AW+LYQY+CQHFLGT+SP+CKY R K++   GGE FH  GQ 
Sbjct: 382  HPPITPMRAATEVMVGGVAWRLYQYVCQHFLGTVSPNCKYIRTKVELSIGGETFHCTGQR 441

Query: 1190 VKVKGFTSIMPWLAVAEINIPQFNEGEKIDISRIEVDEGSTRPPDYLSESELISLMEKNG 1011
            V  KGFT+IMPW AV E  +P F +GE+I++ R+E+ EG+T PPDYL+ESELISLMEK+G
Sbjct: 442  VTEKGFTAIMPWSAVDEKKLPSFLKGERIEVLRVELYEGNTAPPDYLTESELISLMEKHG 501

Query: 1010 IGTDASISVHINNICERNYVQVQAGRRLVPTALGISLIRGYQCIDPDLCLPDIRSFIEHQ 831
            IGTDASI+VHINNI ERNYVQVQ+GR++VPTALGI+LIRGYQCIDPDLCLPDIRSFIE Q
Sbjct: 502  IGTDASIAVHINNIGERNYVQVQSGRKMVPTALGITLIRGYQCIDPDLCLPDIRSFIEQQ 561

Query: 830  ISLVAKGQADHGLVVKHVIEQFKGKFSYFVKQIENMDALFEAEFSPLSDSGRVLSKCGKC 651
            I+LVAKGQADH  VV+HVI+QF+ KFSYFV+QIE+MDALFEA+FSPL+DSGR LSKCGKC
Sbjct: 562  ITLVAKGQADHSHVVQHVIQQFRRKFSYFVQQIEHMDALFEAQFSPLADSGRALSKCGKC 621

Query: 650  LRYMKHISYQPSRLYCGTCEEIYYTPANGTIKLYKELTCPLDNFELLICSMPGPEGKNFP 471
            LRYMKHI+  P RL+CGTCEE+YY P  GT+KLYKEL CPLDNFEL+I S+PGPEGK+FP
Sbjct: 622  LRYMKHITAVPPRLFCGTCEEVYYLPQKGTVKLYKELICPLDNFELVIYSVPGPEGKSFP 681

Query: 470  FCPYCYNSPPFEGIDNLFGATKTAGA-IKLGKGAGMPCFLCPHPTCQHSVISQGVCACPE 294
             CPYCYNSPPFEGID LFGA+KT  A  K   GAGMPC LCPHPTCQHSV +QGVCACPE
Sbjct: 682  LCPYCYNSPPFEGIDTLFGASKTPNAPAKTKTGAGMPCSLCPHPTCQHSVRNQGVCACPE 741

Query: 293  CDGTLVLDPISAPRWRLYCNMCNCLVSLPEGAHRISTTKDRCPNCDSTIIEVDFNKKTTP 114
            C+GTLVLDP+S P+W+L CN+C+C+V LPEGAHRI+TT +RCP CDS IIE+DFNKKTTP
Sbjct: 742  CEGTLVLDPVSFPKWKLNCNLCSCIVLLPEGAHRITTTSNRCPECDSAIIEIDFNKKTTP 801

Query: 113  LKDGATLHVGCILCDELLHSLVEMKHGKSFYRR-GRGR 3
            L++GATLH GC+LCDELL SLVE+KHG+SF RR GRGR
Sbjct: 802  LENGATLHQGCVLCDELLLSLVEVKHGRSFVRRGGRGR 839