BLASTX nr result

ID: Rehmannia25_contig00021835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00021835
         (360 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006338710.1| PREDICTED: protein SMG9-like isoform X3 [Sol...   132   6e-29
ref|XP_006338708.1| PREDICTED: protein SMG9-like isoform X1 [Sol...   132   6e-29
ref|XP_004231766.1| PREDICTED: protein SMG9-like isoform 1 [Sola...   131   8e-29
ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|...   127   2e-27
ref|XP_006443195.1| hypothetical protein CICLE_v10020455mg [Citr...   125   4e-27
ref|XP_006443194.1| hypothetical protein CICLE_v10020455mg [Citr...   125   4e-27
ref|XP_004511426.1| PREDICTED: protein SMG9-like isoform X2 [Cic...   121   8e-26
ref|XP_002520025.1| conserved hypothetical protein [Ricinus comm...   121   8e-26
gb|EXB29165.1| hypothetical protein L484_019690 [Morus notabilis]     119   3e-25
gb|ESW29050.1| hypothetical protein PHAVU_002G039600g [Phaseolus...   118   9e-25
ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max]        117   1e-24
ref|XP_004307869.1| PREDICTED: protein SMG9-like [Fragaria vesca...   116   3e-24
ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]        115   6e-24
ref|XP_003610849.1| Protein SMG9 [Medicago truncatula] gi|355512...   115   6e-24
ref|XP_003614953.1| Protein SMG9 [Medicago truncatula] gi|355516...   114   1e-23
ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|5...   114   2e-23
ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9...   112   7e-23
ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]    112   7e-23
gb|EOX92605.1| Uncharacterized protein isoform 1 [Theobroma cacao]    111   9e-23
gb|EPS60346.1| hypothetical protein M569_14458, partial [Genlise...   110   3e-22

>ref|XP_006338710.1| PREDICTED: protein SMG9-like isoform X3 [Solanum tuberosum]
          Length = 404

 Score =  132 bits (331), Expect = 6e-29
 Identities = 59/81 (72%), Positives = 70/81 (86%)
 Frame = -2

Query: 299 KLFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPSFSRTVSERDWLKNSAKIWELI 120
           KLFL+PS+ KDD  +P +ESH+SALW LRDQVLS   PSFSRTVSERDW+KNSAKIWE+I
Sbjct: 324 KLFLIPSRNKDDSLKPQYESHISALWNLRDQVLSKRGPSFSRTVSERDWVKNSAKIWEII 383

Query: 119 KNSPIIADYCRTLQSCGLYRK 57
           +NS II DYCRTLQS G++R+
Sbjct: 384 RNSSIIVDYCRTLQSSGMFRR 404


>ref|XP_006338708.1| PREDICTED: protein SMG9-like isoform X1 [Solanum tuberosum]
           gi|565343165|ref|XP_006338709.1| PREDICTED: protein
           SMG9-like isoform X2 [Solanum tuberosum]
          Length = 405

 Score =  132 bits (331), Expect = 6e-29
 Identities = 59/81 (72%), Positives = 70/81 (86%)
 Frame = -2

Query: 299 KLFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPSFSRTVSERDWLKNSAKIWELI 120
           KLFL+PS+ KDD  +P +ESH+SALW LRDQVLS   PSFSRTVSERDW+KNSAKIWE+I
Sbjct: 324 KLFLIPSRNKDDSLKPQYESHISALWNLRDQVLSKRGPSFSRTVSERDWVKNSAKIWEII 383

Query: 119 KNSPIIADYCRTLQSCGLYRK 57
           +NS II DYCRTLQS G++R+
Sbjct: 384 RNSSIIVDYCRTLQSSGMFRR 404


>ref|XP_004231766.1| PREDICTED: protein SMG9-like isoform 1 [Solanum lycopersicum]
           gi|460371889|ref|XP_004231767.1| PREDICTED: protein
           SMG9-like isoform 2 [Solanum lycopersicum]
           gi|460371891|ref|XP_004231768.1| PREDICTED: protein
           SMG9-like isoform 3 [Solanum lycopersicum]
          Length = 404

 Score =  131 bits (330), Expect = 8e-29
 Identities = 59/81 (72%), Positives = 70/81 (86%)
 Frame = -2

Query: 299 KLFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPSFSRTVSERDWLKNSAKIWELI 120
           KLFL+PS+ KDD  +P +ESH+SALW LRDQVLS   PSFSRTVSERDW+KNSAKIWE+I
Sbjct: 324 KLFLIPSRDKDDSLKPQYESHISALWNLRDQVLSKRGPSFSRTVSERDWVKNSAKIWEII 383

Query: 119 KNSPIIADYCRTLQSCGLYRK 57
           +NS II DYCRTLQS G++R+
Sbjct: 384 RNSSIIVDYCRTLQSSGMFRR 404


>ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera]
           gi|297737327|emb|CBI26528.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score =  127 bits (318), Expect = 2e-27
 Identities = 59/89 (66%), Positives = 73/89 (82%), Gaps = 3/89 (3%)
 Frame = -2

Query: 314 SDID---PKLFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPSFSRTVSERDWLKN 144
           +D+D   P LFLVP K K D  R  +ES+ S LWKLRDQVLS + PSF+RT+SERDWL+N
Sbjct: 331 TDLDSTLPNLFLVPCKSKVDSPRAQYESYTSMLWKLRDQVLSMNCPSFARTISERDWLRN 390

Query: 143 SAKIWELIKNSPIIADYCRTLQSCGLYRK 57
           SAKIWEL+KNSPIIA+YC+TLQS G++R+
Sbjct: 391 SAKIWELVKNSPIIAEYCKTLQSSGMFRR 419


>ref|XP_006443195.1| hypothetical protein CICLE_v10020455mg [Citrus clementina]
           gi|568850422|ref|XP_006478913.1| PREDICTED: protein
           SMG9-like [Citrus sinensis] gi|557545457|gb|ESR56435.1|
           hypothetical protein CICLE_v10020455mg [Citrus
           clementina]
          Length = 401

 Score =  125 bits (315), Expect = 4e-27
 Identities = 58/82 (70%), Positives = 70/82 (85%)
 Frame = -2

Query: 302 PKLFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPSFSRTVSERDWLKNSAKIWEL 123
           PKLFL+PSK +DD     +ES+ SALWKLRD+VLS + PSF+RTVSERDWLKNSAKIWEL
Sbjct: 320 PKLFLIPSKSRDDSPNAQYESYSSALWKLRDEVLSMNCPSFARTVSERDWLKNSAKIWEL 379

Query: 122 IKNSPIIADYCRTLQSCGLYRK 57
           IK+SPII++Y R LQS G++RK
Sbjct: 380 IKSSPIISEYSRMLQSSGMFRK 401


>ref|XP_006443194.1| hypothetical protein CICLE_v10020455mg [Citrus clementina]
           gi|557545456|gb|ESR56434.1| hypothetical protein
           CICLE_v10020455mg [Citrus clementina]
          Length = 298

 Score =  125 bits (315), Expect = 4e-27
 Identities = 58/82 (70%), Positives = 70/82 (85%)
 Frame = -2

Query: 302 PKLFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPSFSRTVSERDWLKNSAKIWEL 123
           PKLFL+PSK +DD     +ES+ SALWKLRD+VLS + PSF+RTVSERDWLKNSAKIWEL
Sbjct: 217 PKLFLIPSKSRDDSPNAQYESYSSALWKLRDEVLSMNCPSFARTVSERDWLKNSAKIWEL 276

Query: 122 IKNSPIIADYCRTLQSCGLYRK 57
           IK+SPII++Y R LQS G++RK
Sbjct: 277 IKSSPIISEYSRMLQSSGMFRK 298


>ref|XP_004511426.1| PREDICTED: protein SMG9-like isoform X2 [Cicer arietinum]
          Length = 396

 Score =  121 bits (304), Expect = 8e-26
 Identities = 58/97 (59%), Positives = 74/97 (76%)
 Frame = -2

Query: 347 SSAVAFKSHNDSDIDPKLFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPSFSRTV 168
           SS++   S  DSD    LF +P K K+++ R  HES++SALWKLRDQ+LS  +PSF R V
Sbjct: 301 SSSMVHSSPLDSDT-LNLFTIPFKKKEENPRAQHESYISALWKLRDQILSMKSPSFRRAV 359

Query: 167 SERDWLKNSAKIWELIKNSPIIADYCRTLQSCGLYRK 57
           SER+WLKNSAKIWE +KNSP I +YCRTLQ+ G+YR+
Sbjct: 360 SEREWLKNSAKIWEQVKNSPTIFEYCRTLQNSGMYRR 396


>ref|XP_002520025.1| conserved hypothetical protein [Ricinus communis]
           gi|223540789|gb|EEF42349.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 380

 Score =  121 bits (304), Expect = 8e-26
 Identities = 61/92 (66%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
 Frame = -2

Query: 347 SSAVAFKSHNDSDIDP-KLFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPSFSRT 171
           SS V+    ND    P  L L+PSK KDD  R  HES++SALWKLRD+VLS + PSF+RT
Sbjct: 241 SSTVSTTKSNDLHSTPLSLILIPSKNKDDMPRAQHESYISALWKLRDEVLSMNCPSFART 300

Query: 170 VSERDWLKNSAKIWELIKNSPIIADYCRTLQS 75
           VSERDWLKNSAKIWEL+KNS IIA+Y RTLQ+
Sbjct: 301 VSERDWLKNSAKIWELVKNSSIIAEYSRTLQN 332


>gb|EXB29165.1| hypothetical protein L484_019690 [Morus notabilis]
          Length = 467

 Score =  119 bits (299), Expect = 3e-25
 Identities = 57/97 (58%), Positives = 74/97 (76%)
 Frame = -2

Query: 347 SSAVAFKSHNDSDIDPKLFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPSFSRTV 168
           S A + +S +   + P LF++P++ KD+     +ESH S LWKLRDQVLS +  SFSRT+
Sbjct: 371 SVAPSAQSGDPDSVAPNLFVIPARNKDESPINQYESHTSVLWKLRDQVLSMNHLSFSRTL 430

Query: 167 SERDWLKNSAKIWELIKNSPIIADYCRTLQSCGLYRK 57
           SERDWLKNSAKIWEL+KNS IIA+Y +TLQ+ GLYR+
Sbjct: 431 SERDWLKNSAKIWELVKNSAIIAEYSKTLQNSGLYRR 467


>gb|ESW29050.1| hypothetical protein PHAVU_002G039600g [Phaseolus vulgaris]
          Length = 396

 Score =  118 bits (295), Expect = 9e-25
 Identities = 52/81 (64%), Positives = 67/81 (82%)
 Frame = -2

Query: 299 KLFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPSFSRTVSERDWLKNSAKIWELI 120
           KL+ +P K  D++ R  HES++SALWKLRDQ+LS  +PSF+R+VSER+WLKNSAKIWE +
Sbjct: 316 KLYAIPLKKIDENPRAQHESYVSALWKLRDQILSMKSPSFTRSVSEREWLKNSAKIWEQV 375

Query: 119 KNSPIIADYCRTLQSCGLYRK 57
           KNSP I +YCRTLQ  G+YR+
Sbjct: 376 KNSPTILEYCRTLQHSGMYRR 396


>ref|XP_003538657.1| PREDICTED: protein SMG9-like [Glycine max]
          Length = 393

 Score =  117 bits (294), Expect = 1e-24
 Identities = 56/95 (58%), Positives = 73/95 (76%)
 Frame = -2

Query: 347 SSAVAFKSHNDSDIDPKLFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPSFSRTV 168
           SS+    S  DS++  K + +P K KD++ R  HES++SALWKLRDQ+LS  +PSF+R V
Sbjct: 298 SSSPVHGSQMDSNMI-KFYAIPLKKKDENPRAQHESYVSALWKLRDQILSMKSPSFTRPV 356

Query: 167 SERDWLKNSAKIWELIKNSPIIADYCRTLQSCGLY 63
           SER+WLKNSAKIWEL+K+SP I +YCRTLQ  G+Y
Sbjct: 357 SEREWLKNSAKIWELVKSSPTILEYCRTLQHSGMY 391


>ref|XP_004307869.1| PREDICTED: protein SMG9-like [Fragaria vesca subsp. vesca]
          Length = 407

 Score =  116 bits (291), Expect = 3e-24
 Identities = 52/82 (63%), Positives = 68/82 (82%)
 Frame = -2

Query: 302 PKLFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPSFSRTVSERDWLKNSAKIWEL 123
           PK++++P + KDD     +ES+ S LWKLRDQVLS +APSF +T+SERDWLKNSAKIWEL
Sbjct: 326 PKVYVIPMRSKDDSPGEQYESYTSMLWKLRDQVLSMNAPSFRKTLSERDWLKNSAKIWEL 385

Query: 122 IKNSPIIADYCRTLQSCGLYRK 57
           +K+S IIA+Y RTLQS G++R+
Sbjct: 386 VKSSSIIAEYSRTLQSSGMFRR 407


>ref|XP_003516730.1| PREDICTED: protein SMG9-like [Glycine max]
          Length = 392

 Score =  115 bits (288), Expect = 6e-24
 Identities = 55/97 (56%), Positives = 73/97 (75%)
 Frame = -2

Query: 347 SSAVAFKSHNDSDIDPKLFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPSFSRTV 168
           SS++   S  DS++  K + +P K KD++    HES++SALWKLRDQ+LS  +PSF+R V
Sbjct: 297 SSSLVRGSQMDSNLI-KFYAIPLKKKDENPSAQHESYVSALWKLRDQILSMKSPSFTRPV 355

Query: 167 SERDWLKNSAKIWELIKNSPIIADYCRTLQSCGLYRK 57
           SER+WLKNSAKIWE +KNS  I +YCRTLQ  G+YR+
Sbjct: 356 SEREWLKNSAKIWEQVKNSATILEYCRTLQHSGMYRR 392


>ref|XP_003610849.1| Protein SMG9 [Medicago truncatula] gi|355512184|gb|AES93807.1|
           Protein SMG9 [Medicago truncatula]
          Length = 396

 Score =  115 bits (288), Expect = 6e-24
 Identities = 51/80 (63%), Positives = 64/80 (80%)
 Frame = -2

Query: 296 LFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPSFSRTVSERDWLKNSAKIWELIK 117
           LF +P K K+++ R  HES++SALWKLRDQ+LS  +PSF R VSER+WLKNSAKIWE +K
Sbjct: 317 LFTIPFKKKEENPRAQHESYISALWKLRDQILSMKSPSFRRPVSEREWLKNSAKIWEQVK 376

Query: 116 NSPIIADYCRTLQSCGLYRK 57
            SP I +YCRTLQ  G+YR+
Sbjct: 377 KSPTILEYCRTLQHSGMYRR 396


>ref|XP_003614953.1| Protein SMG9 [Medicago truncatula] gi|355516288|gb|AES97911.1|
           Protein SMG9 [Medicago truncatula]
          Length = 394

 Score =  114 bits (286), Expect = 1e-23
 Identities = 59/101 (58%), Positives = 74/101 (73%), Gaps = 2/101 (1%)
 Frame = -2

Query: 356 DAHSSAVAFKSHN-DSDIDP-KLFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPS 183
           D HSS+   K HN D D +P KLF +P K K+D+ R  HES++SALWKLRDQ+LS   PS
Sbjct: 296 DEHSSS---KFHNTDMDSNPLKLFAIPFKKKEDNPRVQHESYISALWKLRDQILSMKPPS 352

Query: 182 FSRTVSERDWLKNSAKIWELIKNSPIIADYCRTLQSCGLYR 60
           F R VSER+WLK+SAKIWE ++NS  I++Y R LQ  G+YR
Sbjct: 353 FKRPVSEREWLKSSAKIWEQVRNSSTISEYGRALQHSGIYR 393


>ref|XP_002328983.1| predicted protein [Populus trichocarpa]
           gi|566200067|ref|XP_006376009.1| hypothetical protein
           POPTR_0013s07930g [Populus trichocarpa]
           gi|550325231|gb|ERP53806.1| hypothetical protein
           POPTR_0013s07930g [Populus trichocarpa]
          Length = 408

 Score =  114 bits (284), Expect = 2e-23
 Identities = 59/104 (56%), Positives = 77/104 (74%), Gaps = 3/104 (2%)
 Frame = -2

Query: 359 KDAHSSAVAFKSHNDSDIDPK---LFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSA 189
           K+  S +V   SH D+D D K   LF++P K KDD  +  ++S++SALWKLRDQVLS + 
Sbjct: 306 KEQISYSVPSNSH-DNDPDSKSINLFVIPLKDKDDSLKAQYKSYISALWKLRDQVLSMNG 364

Query: 188 PSFSRTVSERDWLKNSAKIWELIKNSPIIADYCRTLQSCGLYRK 57
            SF+RTVSERDWLKNSAKIWEL+K S IIA+Y + LQ  G++R+
Sbjct: 365 LSFARTVSERDWLKNSAKIWELVKGSAIIAEYGQALQGSGMFRR 408


>ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9-like [Cucumis sativus]
          Length = 411

 Score =  112 bits (279), Expect = 7e-23
 Identities = 51/83 (61%), Positives = 65/83 (78%)
 Frame = -2

Query: 305 DPKLFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPSFSRTVSERDWLKNSAKIWE 126
           D +L L+P++ KDD +R  +ES   ALWKLRDQVLS +  SF RTVSERDWLKNS KIWE
Sbjct: 329 DRRLLLIPNRNKDDSTRGQYESFNLALWKLRDQVLSMNGASFPRTVSERDWLKNSVKIWE 388

Query: 125 LIKNSPIIADYCRTLQSCGLYRK 57
            +K+SPI+ +Y RTLQS G++R+
Sbjct: 389 SVKSSPIVMEYARTLQSSGMFRR 411


>ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]
          Length = 412

 Score =  112 bits (279), Expect = 7e-23
 Identities = 51/83 (61%), Positives = 65/83 (78%)
 Frame = -2

Query: 305 DPKLFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPSFSRTVSERDWLKNSAKIWE 126
           D +L L+P++ KDD +R  +ES   ALWKLRDQVLS +  SF RTVSERDWLKNS KIWE
Sbjct: 330 DRRLLLIPNRNKDDSTRGQYESFNLALWKLRDQVLSMNGASFPRTVSERDWLKNSVKIWE 389

Query: 125 LIKNSPIIADYCRTLQSCGLYRK 57
            +K+SPI+ +Y RTLQS G++R+
Sbjct: 390 SVKSSPIVMEYARTLQSSGMFRR 412


>gb|EOX92605.1| Uncharacterized protein isoform 1 [Theobroma cacao]
          Length = 395

 Score =  111 bits (278), Expect = 9e-23
 Identities = 51/80 (63%), Positives = 66/80 (82%)
 Frame = -2

Query: 296 LFLVPSKGKDDDSRPHHESHLSALWKLRDQVLSTSAPSFSRTVSERDWLKNSAKIWELIK 117
           LF++P K KDD      ES++S+LWKLRDQVLS + PSF+R VSERDWLK+SAKIWEL+K
Sbjct: 316 LFVIPYKDKDDSPSAQCESYVSSLWKLRDQVLSMTCPSFTRNVSERDWLKSSAKIWELVK 375

Query: 116 NSPIIADYCRTLQSCGLYRK 57
           +SPII++Y RTL S G++R+
Sbjct: 376 SSPIISEYSRTLLSSGMFRR 395


>gb|EPS60346.1| hypothetical protein M569_14458, partial [Genlisea aurea]
          Length = 171

 Score =  110 bits (274), Expect = 3e-22
 Identities = 52/89 (58%), Positives = 71/89 (79%), Gaps = 2/89 (2%)
 Frame = -2

Query: 317 DSDIDPKLFLVPSKGKDDDSRP--HHESHLSALWKLRDQVLSTSAPSFSRTVSERDWLKN 144
           DS+   KLF +P KG+ + SRP   +ES+ SALWKLRDQ+LS + P++SR+VSERDWLKN
Sbjct: 83  DSENRFKLFHIPYKGRRNSSRPAPQYESYNSALWKLRDQILSMTCPAYSRSVSERDWLKN 142

Query: 143 SAKIWELIKNSPIIADYCRTLQSCGLYRK 57
           S+KIW LIK+SP++ADYCR LQ+  ++ +
Sbjct: 143 SSKIWGLIKSSPVMADYCRMLQTSAVHER 171


Top