BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00021799
         (374 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269723.2| PREDICTED: DNA-directed RNA polymerases I, I...   104   1e-20
emb|CBI35146.3| unnamed protein product [Vitis vinifera]              104   1e-20
emb|CAN60800.1| hypothetical protein VITISV_022856 [Vitis vinifera]   104   1e-20
gb|EMJ22328.1| hypothetical protein PRUPE_ppa018371mg, partial [...   100   2e-19
ref|XP_002513077.1| DNA-directed RNA polymerase II, putative [Ri...   100   2e-19
ref|XP_006495089.1| PREDICTED: DNA-directed RNA polymerase V sub...   100   3e-19
ref|XP_006494346.1| PREDICTED: DNA-directed RNA polymerase V sub...   100   3e-19
ref|XP_006420753.1| hypothetical protein CICLE_v10005821mg [Citr...    98   1e-18
ref|XP_006420752.1| hypothetical protein CICLE_v10005821mg [Citr...    98   1e-18
ref|XP_006495128.1| PREDICTED: DNA-directed RNA polymerase V sub...    96   6e-18
gb|ABD28306.1| RNA polymerase subunit, RPB5; RNA polymerase Rpb5...    94   2e-17
gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subun...    93   4e-17
gb|EOY19924.1| RNA polymerase II fifth largest subunit, putative...    92   9e-17
gb|EOY19923.1| RNA polymerase II fifth largest subunit, putative...    92   9e-17
ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V sub...    91   1e-16
ref|XP_004230150.1| PREDICTED: DNA-directed RNA polymerases I, I...    91   1e-16
ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V sub...    91   2e-16
ref|XP_004307128.1| PREDICTED: DNA-directed RNA polymerases I, I...    91   2e-16
ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, I...    90   3e-16
ref|XP_002297750.2| eukaryotic rpb5 RNA polymerase subunit famil...    90   3e-16

>ref|XP_002269723.2| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Vitis vinifera]
          Length = 221

 Score =  104 bits (259), Expect = 1e-20
 Identities = 54/89 (60%), Positives = 70/89 (78%)
 Frame = +3

Query: 102 CEPIEIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLI 281
           C   EIRK  ++ ++ Q +N+E L R+IL+LQSKMNSHA+KV+ EYP+KVE F ITELLI
Sbjct: 90  CGTDEIRKA-VIRVIFQQINREGLHRLILVLQSKMNSHARKVVDEYPIKVEFFQITELLI 148

Query: 282 NITKHFLAPRHEILSPEEKDKLLNKHSVE 368
           NITKH   P+HEILS +EK KL+NK+ +E
Sbjct: 149 NITKHVSVPKHEILSAQEKRKLVNKYKLE 177


>emb|CBI35146.3| unnamed protein product [Vitis vinifera]
          Length = 731

 Score =  104 bits (259), Expect = 1e-20
 Identities = 54/89 (60%), Positives = 70/89 (78%)
 Frame = +3

Query: 102 CEPIEIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLI 281
           C   EIRK  ++ ++ Q +N+E L R+IL+LQSKMNSHA+KV+ EYP+KVE F ITELLI
Sbjct: 600 CGTDEIRKA-VIRVIFQQINREGLHRLILVLQSKMNSHARKVVDEYPIKVEFFQITELLI 658

Query: 282 NITKHFLAPRHEILSPEEKDKLLNKHSVE 368
           NITKH   P+HEILS +EK KL+NK+ +E
Sbjct: 659 NITKHVSVPKHEILSAQEKRKLVNKYKLE 687


>emb|CAN60800.1| hypothetical protein VITISV_022856 [Vitis vinifera]
          Length = 162

 Score =  104 bits (259), Expect = 1e-20
 Identities = 54/89 (60%), Positives = 70/89 (78%)
 Frame = +3

Query: 102 CEPIEIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLI 281
           C   EIRK  ++ ++ Q +N+E L R+IL+LQSKMNSHA+KV+ EYP+KVE F ITELLI
Sbjct: 31  CGTDEIRKA-VIRVIFQQINREGLHRLILVLQSKMNSHARKVVDEYPIKVEFFQITELLI 89

Query: 282 NITKHFLAPRHEILSPEEKDKLLNKHSVE 368
           NITKH   P+HEILS +EK KL+NK+ +E
Sbjct: 90  NITKHVSVPKHEILSAQEKRKLVNKYKLE 118


>gb|EMJ22328.1| hypothetical protein PRUPE_ppa018371mg, partial [Prunus persica]
          Length = 214

 Score =  100 bits (250), Expect = 2e-19
 Identities = 51/89 (57%), Positives = 67/89 (75%)
 Frame = +3

Query: 102 CEPIEIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLI 281
           C   EIRK+ M G+ + + NKE + R+IL+LQSKMNS+A+K L  YP KVETF I +LL+
Sbjct: 82  CGTEEIRKQTMCGIYAGLPNKENIHRLILVLQSKMNSYARKELEMYPFKVETFHICDLLV 141

Query: 282 NITKHFLAPRHEILSPEEKDKLLNKHSVE 368
           NITKH L P+ EIL+ EEK+KLL K+ +E
Sbjct: 142 NITKHALKPKLEILTAEEKNKLLRKYKLE 170


>ref|XP_002513077.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
           gi|223548088|gb|EEF49580.1| DNA-directed RNA polymerase
           II, putative [Ricinus communis]
          Length = 239

 Score =  100 bits (249), Expect = 2e-19
 Identities = 51/85 (60%), Positives = 66/85 (77%)
 Frame = +3

Query: 114 EIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLINITK 293
           EI+  N+ GLL QI NKE L+ +ILILQSKMN +A+K L ++P KVE F I++LL+NITK
Sbjct: 111 EIKLANIRGLLCQIKNKESLNGLILILQSKMNHYARKELGQFPSKVEIFHISDLLVNITK 170

Query: 294 HFLAPRHEILSPEEKDKLLNKHSVE 368
           H L PRHE+L+ E+K +LLNK S E
Sbjct: 171 HVLKPRHEVLTAEQKQQLLNKFSSE 195


>ref|XP_006495089.1| PREDICTED: DNA-directed RNA polymerase V subunit 5C-like [Citrus
           sinensis]
          Length = 312

 Score =  100 bits (248), Expect = 3e-19
 Identities = 47/86 (54%), Positives = 66/86 (76%)
 Frame = +3

Query: 114 EIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLINITK 293
           EIR + + GL  QI+NKE L  +ILILQS MN+ A+K ++++P KVE F IT+LL+N+TK
Sbjct: 95  EIRTQAIRGLYGQILNKEALHGLILILQSNMNTFARKEVLKFPFKVEIFHITDLLVNVTK 154

Query: 294 HFLAPRHEILSPEEKDKLLNKHSVEG 371
           H L P+HE+LS  E+DKL+ K+ +EG
Sbjct: 155 HILQPKHEVLSAGERDKLMKKYKIEG 180


>ref|XP_006494346.1| PREDICTED: DNA-directed RNA polymerase V subunit 5C-like [Citrus
           sinensis]
          Length = 189

 Score =  100 bits (248), Expect = 3e-19
 Identities = 47/86 (54%), Positives = 66/86 (76%)
 Frame = +3

Query: 114 EIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLINITK 293
           EIR + + GL  QI+NKE L  +ILILQS MN+ A+K ++++P KVE F IT+LL+N+TK
Sbjct: 95  EIRTQAIRGLYGQILNKEALHGLILILQSNMNTFARKEVLKFPFKVEIFHITDLLVNVTK 154

Query: 294 HFLAPRHEILSPEEKDKLLNKHSVEG 371
           H L P+HE+LS  E+DKL+ K+ +EG
Sbjct: 155 HILQPKHEVLSAGERDKLMKKYKIEG 180


>ref|XP_006420753.1| hypothetical protein CICLE_v10005821mg [Citrus clementina]
           gi|557522626|gb|ESR33993.1| hypothetical protein
           CICLE_v10005821mg [Citrus clementina]
          Length = 224

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 46/86 (53%), Positives = 65/86 (75%)
 Frame = +3

Query: 114 EIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLINITK 293
           E+R + + GL  QI+NKE L  +ILILQS MN+ A+K ++++P KVE F IT+LL+N+ K
Sbjct: 96  EVRTQAIRGLYGQILNKEALHGLILILQSNMNTFARKEVLKFPFKVEIFHITDLLVNVMK 155

Query: 294 HFLAPRHEILSPEEKDKLLNKHSVEG 371
           H L P+HE+LS  E+DKLL K+ +EG
Sbjct: 156 HILQPKHEVLSAGERDKLLKKYKIEG 181


>ref|XP_006420752.1| hypothetical protein CICLE_v10005821mg [Citrus clementina]
           gi|557522625|gb|ESR33992.1| hypothetical protein
           CICLE_v10005821mg [Citrus clementina]
          Length = 209

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 46/86 (53%), Positives = 65/86 (75%)
 Frame = +3

Query: 114 EIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLINITK 293
           E+R + + GL  QI+NKE L  +ILILQS MN+ A+K ++++P KVE F IT+LL+N+ K
Sbjct: 96  EVRTQAIRGLYGQILNKEALHGLILILQSNMNTFARKEVLKFPFKVEIFHITDLLVNVMK 155

Query: 294 HFLAPRHEILSPEEKDKLLNKHSVEG 371
           H L P+HE+LS  E+DKLL K+ +EG
Sbjct: 156 HILQPKHEVLSAGERDKLLKKYKIEG 181


>ref|XP_006495128.1| PREDICTED: DNA-directed RNA polymerase V subunit 5C-like [Citrus
           sinensis]
          Length = 153

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 44/78 (56%), Positives = 61/78 (78%)
 Frame = +3

Query: 138 GLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLINITKHFLAPRHE 317
           GL  QI+NKE L  +ILILQS MN+ A+K ++++P KVE F IT+LL+N+TKH L P+HE
Sbjct: 33  GLYGQILNKEALHGLILILQSNMNTFARKEVLKFPFKVEIFYITDLLVNVTKHILQPKHE 92

Query: 318 ILSPEEKDKLLNKHSVEG 371
           +LS  E+DKL+ K+ +EG
Sbjct: 93  VLSAGERDKLMKKYKIEG 110


>gb|ABD28306.1| RNA polymerase subunit, RPB5; RNA polymerase Rpb5, N-terminal
           [Medicago truncatula]
          Length = 224

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 44/85 (51%), Positives = 64/85 (75%)
 Frame = +3

Query: 114 EIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLINITK 293
           +IRK N++ + SQI++KE L R+IL++QSKM S+A+K L   P KVE   + +LL+N+TK
Sbjct: 96  DIRKSNLIVIQSQIVDKERLSRLILVMQSKMTSYARKELENCPFKVEIIQLNDLLVNVTK 155

Query: 294 HFLAPRHEILSPEEKDKLLNKHSVE 368
           H L P++E+L+  EK KLLNK+ VE
Sbjct: 156 HVLQPKYEVLTANEKQKLLNKYKVE 180


>gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
           notabilis]
          Length = 231

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 44/89 (49%), Positives = 63/89 (70%)
 Frame = +3

Query: 102 CEPIEIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLI 281
           CEP  ++  ++ G+  QI+N+  L  +IL+LQS+M + AQK +   P KVE F IT+LLI
Sbjct: 99  CEPGVVKVTSVRGIAGQIVNRNTLTGLILVLQSQMTNQAQKAVELLPFKVEIFQITDLLI 158

Query: 282 NITKHFLAPRHEILSPEEKDKLLNKHSVE 368
           NITKH L P+H +L+ +EK KLL K+S+E
Sbjct: 159 NITKHLLRPKHRVLTDQEKQKLLKKYSIE 187


>gb|EOY19924.1| RNA polymerase II fifth largest subunit, putative isoform 2
           [Theobroma cacao]
          Length = 235

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 48/85 (56%), Positives = 60/85 (70%)
 Frame = +3

Query: 114 EIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLINITK 293
           +IRK  +  L  QI+N E L  +ILILQSKMNS A K L  +P KVE F I +L +NITK
Sbjct: 108 DIRKATVCALKGQILN-ESLSGLILILQSKMNSFALKELKNFPFKVELFKIADLYVNITK 166

Query: 294 HFLAPRHEILSPEEKDKLLNKHSVE 368
           HFL P+HE+L+ EEK KLL K+ +E
Sbjct: 167 HFLMPKHEVLTAEEKQKLLKKYQLE 191


>gb|EOY19923.1| RNA polymerase II fifth largest subunit, putative isoform 1
           [Theobroma cacao]
          Length = 263

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 48/85 (56%), Positives = 60/85 (70%)
 Frame = +3

Query: 114 EIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLINITK 293
           +IRK  +  L  QI+N E L  +ILILQSKMNS A K L  +P KVE F I +L +NITK
Sbjct: 136 DIRKATVCALKGQILN-ESLSGLILILQSKMNSFALKELKNFPFKVELFKIADLYVNITK 194

Query: 294 HFLAPRHEILSPEEKDKLLNKHSVE 368
           HFL P+HE+L+ EEK KLL K+ +E
Sbjct: 195 HFLMPKHEVLTAEEKQKLLKKYQLE 219


>ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
           tuberosum]
          Length = 227

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 43/89 (48%), Positives = 64/89 (71%)
 Frame = +3

Query: 102 CEPIEIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLI 281
           C P  ++   +  +LSQIMNKE L R+ILI+++ M + A KV+ + P K E F IT+LL+
Sbjct: 95  CGPNSVKMNVIRSILSQIMNKESLSRLILIIENPMTNPAMKVVEDSPFKTEIFQITDLLV 154

Query: 282 NITKHFLAPRHEILSPEEKDKLLNKHSVE 368
           NITKH L P+HE+L+  EK++LL K+++E
Sbjct: 155 NITKHVLKPKHELLTNTEKEQLLKKYNLE 183


>ref|XP_004230150.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Solanum lycopersicum]
          Length = 227

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 43/89 (48%), Positives = 64/89 (71%)
 Frame = +3

Query: 102 CEPIEIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLI 281
           C P  ++   +  +LSQIMNKE L R+ILI+++ M + A KV+ + P K E F IT+LL+
Sbjct: 95  CGPNSVKMNVIRNILSQIMNKESLSRLILIIENPMTNPAMKVVEDSPFKTEIFQITDLLV 154

Query: 282 NITKHFLAPRHEILSPEEKDKLLNKHSVE 368
           NITKH L P+HE+L+  EK++LL K+++E
Sbjct: 155 NITKHVLKPKHELLTNAEKEQLLKKYNLE 183


>ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
           tuberosum]
          Length = 227

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 43/89 (48%), Positives = 64/89 (71%)
 Frame = +3

Query: 102 CEPIEIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLI 281
           C P  ++   +  +L+QIMNKE L R+IL++Q++M + A K +  +  KVE F IT+LL+
Sbjct: 95  CGPNAVKVNVIRSILTQIMNKESLSRLILVIQNQMTNPAMKAVELFSFKVEIFQITDLLV 154

Query: 282 NITKHFLAPRHEILSPEEKDKLLNKHSVE 368
           NITKH L PRHE+L+  EK+KLL K+++E
Sbjct: 155 NITKHVLKPRHELLTDTEKEKLLKKYNLE 183


>ref|XP_004307128.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Fragaria vesca subsp. vesca]
          Length = 228

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 46/89 (51%), Positives = 65/89 (73%)
 Frame = +3

Query: 102 CEPIEIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLI 281
           C   EIRK N   + +++MNK+ +  ++L+LQSK+NS A+K L  YP KVETF I+ELL+
Sbjct: 97  CGTDEIRKANAREIYAKLMNKD-ISSLMLVLQSKINSFARKELETYPYKVETFHISELLV 155

Query: 282 NITKHFLAPRHEILSPEEKDKLLNKHSVE 368
           N+TKH L P++EIL+ EEK  LL K+ +E
Sbjct: 156 NVTKHVLHPKYEILTAEEKKNLLRKYKLE 184


>ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Solanum lycopersicum]
          Length = 227

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 43/89 (48%), Positives = 64/89 (71%)
 Frame = +3

Query: 102 CEPIEIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLI 281
           C P  ++   +  +L+QIMNKE L R+IL++Q++M + A K +  +  KVE F IT+LL+
Sbjct: 95  CGPNAVKVNVIRSILTQIMNKESLSRLILVIQNQMTNPALKAVELFSFKVEIFQITDLLV 154

Query: 282 NITKHFLAPRHEILSPEEKDKLLNKHSVE 368
           NITKH L PRHE+L+  EK+KLL K+++E
Sbjct: 155 NITKHVLKPRHELLTDTEKEKLLKKYNLE 183


>ref|XP_002297750.2| eukaryotic rpb5 RNA polymerase subunit family protein [Populus
           trichocarpa] gi|550346648|gb|EEE82555.2| eukaryotic rpb5
           RNA polymerase subunit family protein [Populus
           trichocarpa]
          Length = 233

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 44/85 (51%), Positives = 63/85 (74%)
 Frame = +3

Query: 114 EIRKRNMLGLLSQIMNKEMLDRVILILQSKMNSHAQKVLVEYPVKVETFPITELLINITK 293
           EI+  N+  +  QI+NKE L  +ILILQSKMN  A+K L ++P KVE F IT+LL+NITK
Sbjct: 105 EIKTANIRTVYGQILNKESLHGLILILQSKMNHFAKKELEKFPFKVEVFQITDLLVNITK 164

Query: 294 HFLAPRHEILSPEEKDKLLNKHSVE 368
           H L P+ +IL+ E+K +++NK+ +E
Sbjct: 165 HVLQPQMDILTAEQKQQVMNKYKLE 189