BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00021691
         (878 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007761643.1| capsid protein [Rose yellow vein virus] gi|3...    62   3e-07
ref|YP_004347414.1| coat protein/movement protein [Sweet potato ...    58   5e-06
ref|NP_569139.1| putative coat protein [Tobacco vein clearing vi...    57   7e-06

>ref|YP_007761643.1| capsid protein [Rose yellow vein virus] gi|397559411|gb|AFO54490.1|
           capsid protein [Rose yellow vein virus]
          Length = 498

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 11/204 (5%)
 Frame = +3

Query: 267 IHPYGLMLNLDIPDFKNREVLIDEWASAMRISAGTL-DLTKDSFILLLEMSLEGSVKIAW 443
           I+  G++L  D P  + +E  ID W +AM I+ G     T    +   E + +G+ K+AW
Sbjct: 164 INDKGIILYCDNPSTQMQE--IDAWEAAMDIAVGLHPQWTAQQRLAYAENTFQGTAKLAW 221

Query: 444 DMTDASTKSS------VTSGESLKGIVDGMAKLFKIQFIGTGYFEGLEDEKRK---RYKQ 596
           +    S   +      + SG    G+   +    +++  G    E  ++EK K   + K 
Sbjct: 222 NAFKGSINFTNWYNVFIASG----GLGKFITSTLRLEICG---IESTDEEKLKLQEKAKH 274

Query: 597 ALYSLELHDICHIDEYIKLFTEYRW-KSKIGEKEAAQLFFAKIPSPWREMLIREYKDGAE 773
            L +L L DI  +D+Y  +FT+  W   ++   E    +F+K+P P+ E   +EY    E
Sbjct: 275 LLQTLRLCDISMLDKYNVIFTKLYWIAGEVTNLETLNSYFSKLPPPFNEKAKKEYVSD-E 333

Query: 774 VETVARKMSFLKVKLSEWYYQAAL 845
            +T+ +++  ++  L ++ ++  L
Sbjct: 334 KDTIGKRVRHVQNILEQYCFERRL 357


>ref|YP_004347414.1| coat protein/movement protein [Sweet potato caulimo-like virus]
            gi|327202119|gb|AEA36696.1| coat protein/movement protein
            [Sweet potato caulimo-like virus]
          Length = 1264

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 8/200 (4%)
 Frame = +3

Query: 183  RNPLTGTRQPTGRPNVYQTPYGRSHLDPIHPYGLMLNLDIPDFKNREVLIDEWASAMRIS 362
            R+     R+    PN   T  G +        G  LNL+  D K  E  I++WA +M I+
Sbjct: 443  RSDYINRRRTQFEPNYIHTDIGEN--------GEALNLNCIDAKESEERIEKWAQSMSIT 494

Query: 363  AGTLDLTKDSFILLLEMSLEGSVKIAWDMTDASTKSSVTSGESLKGIVDGMAKLFKIQFI 542
                ++T D+    +  +L G VK  ++    S KS +  G S    +  +    + +F 
Sbjct: 495  IAKQNMTNDNAKKFIIRTLLGDVKDWYENLTESAKSQL-EGTSALSTLANIEVAIRAEFG 553

Query: 543  GTGYFEGLEDEKRKRYKQALYSLELHDIC-----HIDEYIKLFTEYRWKSKIGEKEAAQ- 704
              G         RK+       ++L  IC     ++  YI  F EY +K+   ++E  Q 
Sbjct: 554  KLGIENDATKMTRKKNSARAKLMQL-SICNMRMENLKAYICEFKEYFYKAAYSDEEREQI 612

Query: 705  --LFFAKIPSPWREMLIREY 758
              +F+ K+P PW   ++  Y
Sbjct: 613  LDIFYTKLPDPWGMSILEAY 632


>ref|NP_569139.1| putative coat protein [Tobacco vein clearing virus]
           gi|6425073|gb|AAF08287.1|AF190123_1 putative coat
           protein [Tobacco vein clearing virus]
          Length = 579

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 43/202 (21%), Positives = 92/202 (45%), Gaps = 11/202 (5%)
 Frame = +3

Query: 264 PIHPYGLMLNLDIPDFKNREVLIDEWASAMRISAGTLDLTKDSFILLLEMSLEGSVKIAW 443
           PIH     L+LD  +  N+ + +     + ++    + +T+    +  E +L G+VK+  
Sbjct: 230 PIHEQYNFLDLDCVEDINKTIQLWIGYISKQLIDNKIGITETPGYI--ERTLIGTVKLWL 287

Query: 444 DMTDASTKSSVTSGESLKG--IVDGMAKLFKIQFIGTGYFEGLEDEKRKRYKQA------ 599
                 +  ++ S +   G      M  L+K +      F  +  E  +++K+       
Sbjct: 288 HNLTKESIDTLRSNKKFNGDMATTSMEILYKYEIAIRNEFSSMTTETEEQHKEKQINRNL 347

Query: 600 LYSLELHDICHIDEYIKLFTEYRWKSKIGEKEAAQ---LFFAKIPSPWREMLIREYKDGA 770
           +  L + ++C+IDEY   F EY +K     +E  +   L+F K+P P+   +I+++ +  
Sbjct: 348 MTKLAICNMCYIDEYTCAFREYYYKGTYNTEEGREIRKLYFTKLPEPFSSKIIKDWNEAG 407

Query: 771 EVETVARKMSFLKVKLSEWYYQ 836
             +T+  ++ FL+    +W+ Q
Sbjct: 408 LTDTLGARIKFLQ----QWFVQ 425