BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00021243
         (696 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  223   1e-63
emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]   218   2e-63
emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group]        225   2e-63
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...   226   4e-63
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   226   4e-63
ref|XP_006494841.1| PREDICTED: uncharacterized protein LOC102608...   221   9e-63
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-...   224   1e-62
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   224   1e-62
gb|AAB82754.1| retrofit [Oryza longistaminata]                        224   3e-62
emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]   213   6e-61
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   219   8e-61
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   219   8e-61
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   218   1e-60
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                  219   1e-60
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   216   4e-60
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]   215   4e-59
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g...   218   4e-59
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz...   218   6e-59
ref|XP_006579236.1| PREDICTED: uncharacterized protein LOC102665...   211   7e-59
emb|CAH66819.1| OSIGBa0093K19.6 [Oryza sativa Indica Group]           214   1e-58

>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  223 bits (569), Expect(2) = 1e-63
 Identities = 106/198 (53%), Positives = 147/198 (74%)
 Frame = +1

Query: 103  VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
            V+K+K+ ADGT+ +YKARLVAKG+ Q  G+DY DTFS VVK ATIRI+LS+AV++GWS+R
Sbjct: 974  VYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLR 1033

Query: 283  QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
            Q+DV NAFL+G ++ ++YM+QP GFE  S    VCKL K+LYGLKQA RAW S+    L+
Sbjct: 1034 QLDVQNAFLHGFLEEEVYMQQPPGFESFSKPNYVCKLDKALYGLKQAPRAWYSRLSKKLV 1093

Query: 463  SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
             LGF+ S+ADTSL++ +     + ++ YVDDII+  + ++   +++ DL+  F+LKDLG 
Sbjct: 1094 ELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIIASSTEKATTALLKDLNKEFALKDLGD 1153

Query: 643  LSYFLGIEVCHGQDGLFL 696
            L YFLGIEV    +G+ L
Sbjct: 1154 LHYFLGIEVTKVPNGIVL 1171



 Score = 47.0 bits (110), Expect(2) = 1e-63
 Identities = 20/35 (57%), Positives = 23/35 (65%)
 Frame = +3

Query: 3    WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
            WKAAM+ EYDALIKN TW L        VIGC+ +
Sbjct: 940  WKAAMEAEYDALIKNDTWHLVPYEKGQNVIGCKWV 974


>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
          Length = 1312

 Score =  218 bits (556), Expect(2) = 2e-63
 Identities = 101/198 (51%), Positives = 144/198 (72%)
 Frame = +1

Query: 103  VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
            VFK+K   +G++ +YKARLVA+G++Q+ G+D+ +TFS VVKP TIR+VLS+AV+  W I+
Sbjct: 845  VFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVVKPCTIRLVLSIAVSSNWPIK 904

Query: 283  QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
            Q+DV NAFLNGD+   ++M QP GFE  S    VC+L+K+LYGLKQA RAW  K  + L+
Sbjct: 905  QLDVHNAFLNGDLQEQVFMMQPPGFEDNSCPTHVCRLQKALYGLKQAPRAWFHKLSSFLL 964

Query: 463  SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
             +GF+ S+AD SL+Y H     ++++ YVDDI++TG++   +  +I  LS+HF+L+DLG 
Sbjct: 965  QIGFQCSRADASLFYFHSASDIIILLIYVDDILITGSNPSRVHQIISQLSSHFALRDLGD 1024

Query: 643  LSYFLGIEVCHGQDGLFL 696
            +SYFLGIEV      L L
Sbjct: 1025 ISYFLGIEVTRRSHALHL 1042



 Score = 51.2 bits (121), Expect(2) = 2e-63
 Identities = 20/35 (57%), Positives = 26/35 (74%)
 Frame = +3

Query: 3   WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
           WK AM+ EY AL+KNQTW L   P +AK+IGC+ +
Sbjct: 811 WKVAMEQEYQALLKNQTWSLVPPPSNAKIIGCKWV 845


>emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group]
          Length = 950

 Score =  225 bits (573), Expect(2) = 2e-63
 Identities = 106/198 (53%), Positives = 147/198 (74%)
 Frame = +1

Query: 103 VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
           V+K+K+ ADGT+ +YKARLVAKG+ Q  G+DY DTFSSVVK ATIRI+LS+A+++GWS+R
Sbjct: 51  VYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSSVVKAATIRIILSIAISRGWSLR 110

Query: 283 QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
           Q+DV N FL+G +  ++YM+QP GFE  S    VCKL K+LYGLKQA+RAW S+    L+
Sbjct: 111 QLDVQNVFLHGFLQEEVYMQQPPGFESSSKPNYVCKLDKALYGLKQATRAWYSRLSKKLV 170

Query: 463 SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
            LGF+ S+ADTSL++ +     + ++ YVDDIIV  + ++   +++ DL+  F+LKDLG 
Sbjct: 171 ELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIVASSTEKATTALLKDLNKEFALKDLGD 230

Query: 643 LSYFLGIEVCHGQDGLFL 696
           L YFLGIEV    +G+ L
Sbjct: 231 LHYFLGIEVTKVSNGIIL 248



 Score = 44.7 bits (104), Expect(2) = 2e-63
 Identities = 19/35 (54%), Positives = 22/35 (62%)
 Frame = +3

Query: 3   WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
           W AAMQ EYDALIKN TW L        +IGC+ +
Sbjct: 17  WIAAMQAEYDALIKNNTWHLVPYEKGQNIIGCKWV 51


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1478

 Score =  226 bits (575), Expect(2) = 4e-63
 Identities = 111/198 (56%), Positives = 147/198 (74%)
 Frame = +1

Query: 103  VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
            V+K+K+ ADGT+ +YKARLVAKG+ Q  G+DY DTFS VVK ATIRI+LSLAV+KGWS+R
Sbjct: 984  VYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLR 1043

Query: 283  QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
            Q+DV NAFL+G ++ ++YM QP GFE  +    VCKL K+LYGLKQA RAW S+    L+
Sbjct: 1044 QLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLM 1103

Query: 463  SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
             LGFK S+ADTSL++ +  D  + ++ YVDDIIV  + ++   +++ DL   F+LKDLG 
Sbjct: 1104 DLGFKGSKADTSLFFLNKGDITMFVLVYVDDIIVASSSERATAALLQDLKGEFALKDLGE 1163

Query: 643  LSYFLGIEVCHGQDGLFL 696
            L YFLGIEV   Q+G+ L
Sbjct: 1164 LHYFLGIEVSKVQNGIVL 1181



 Score = 42.7 bits (99), Expect(2) = 4e-63
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +3

Query: 3    WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
            WK AM  EYDAL+KN+TW L        +IGC+ +
Sbjct: 950  WKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWV 984


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  226 bits (576), Expect(2) = 4e-63
 Identities = 107/198 (54%), Positives = 150/198 (75%)
 Frame = +1

Query: 103  VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
            V+K+K+ ADG++ +YKARLVAKGY Q  G+DY DTFS VVK ATIRI+LS+AV++GWS+ 
Sbjct: 851  VYKIKRKADGSLDRYKARLVAKGYKQQYGIDYDDTFSPVVKHATIRIILSIAVSRGWSLC 910

Query: 283  QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
            Q+DV NAFL+G ++ ++YM+QP G+E  +    VCKL K+LYGLKQA RAW S+  N L+
Sbjct: 911  QLDVQNAFLHGVLEEEVYMQQPPGYEDSTKLNYVCKLDKALYGLKQAPRAWYSRLSNKLL 970

Query: 463  SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
            SLGF+ S+ADTSL++ +     + ++ YVDDIIV  +  +  ++++ DL+  F+LKDLG 
Sbjct: 971  SLGFQASKADTSLFFYNKGSVTIFVLVYVDDIIVASSTHKATEALLSDLNKEFALKDLGD 1030

Query: 643  LSYFLGIEVCHGQDGLFL 696
            L+YFLGIEV   +DG+ L
Sbjct: 1031 LNYFLGIEVNKVRDGIIL 1048



 Score = 42.4 bits (98), Expect(2) = 4e-63
 Identities = 18/35 (51%), Positives = 22/35 (62%)
 Frame = +3

Query: 3   WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
           WK AM IEY AL+KN+TW L        VIGC+ +
Sbjct: 817 WKDAMDIEYSALMKNKTWHLVPPKKGRNVIGCKWV 851


>ref|XP_006494841.1| PREDICTED: uncharacterized protein LOC102608996 [Citrus sinensis]
          Length = 1923

 Score =  221 bits (564), Expect(2) = 9e-63
 Identities = 110/198 (55%), Positives = 142/198 (71%)
 Frame = +1

Query: 103  VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
            VF+ K N  GTV+K+KARLVAKG++Q+AG+DY +TFS VVK +T+R +LSLAV KGW +R
Sbjct: 735  VFRTKYNTYGTVSKHKARLVAKGFHQTAGVDYKETFSPVVKSSTVRTILSLAVMKGWKVR 794

Query: 283  QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
            QID++NAFLNGDI  D+YM QP GF   + +  VCKL K+LYGLKQA RAW  K    L 
Sbjct: 795  QIDINNAFLNGDISEDLYMTQPEGF--ITKEGYVCKLSKALYGLKQAPRAWYDKLKGCLT 852

Query: 463  SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
            S  F  S+ADTSL+ RH     +L++ YVDDI++TG     L++ I   S  F+LKDLG 
Sbjct: 853  SWNFFNSKADTSLFIRHDTRGIILVLIYVDDILITGPDSSLLETFITKFSKVFALKDLGF 912

Query: 643  LSYFLGIEVCHGQDGLFL 696
            +SYFLG+EVC+   G+ L
Sbjct: 913  VSYFLGVEVCYTDSGMHL 930



 Score = 45.8 bits (107), Expect(2) = 9e-63
 Identities = 18/35 (51%), Positives = 24/35 (68%)
 Frame = +3

Query: 3   WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
           WKAAMQ E+DAL +N TW L  V    K++GC+ +
Sbjct: 701 WKAAMQSEFDALTRNNTWTLVPVTSQHKLVGCKWV 735


>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  224 bits (570), Expect(2) = 1e-62
 Identities = 110/198 (55%), Positives = 147/198 (74%)
 Frame = +1

Query: 103  VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
            V+K+K+ ADGT+ +YKARLVAKG+ Q  G+DY DTFS VVK ATIRI+LSLAV+KGWS+R
Sbjct: 713  VYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLR 772

Query: 283  QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
            Q+DV NAFL+G ++ ++YM QP GFE  +    VCKL K+LYGLKQA RAW S+    L+
Sbjct: 773  QLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLM 832

Query: 463  SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
             LGFK S+ADTSL++ +  D  + ++ YVDDIIV  + ++   +++ +L   F+LKDLG 
Sbjct: 833  DLGFKGSKADTSLFFLNKGDITMFVLVYVDDIIVASSSEKATAALLQNLKGEFALKDLGE 892

Query: 643  LSYFLGIEVCHGQDGLFL 696
            L YFLGIEV   Q+G+ L
Sbjct: 893  LHYFLGIEVSKVQNGIVL 910



 Score = 42.7 bits (99), Expect(2) = 1e-62
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +3

Query: 3   WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
           WK AM  EYDAL+KN+TW L        +IGC+ +
Sbjct: 679 WKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWV 713


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  224 bits (570), Expect(2) = 1e-62
 Identities = 110/198 (55%), Positives = 146/198 (73%)
 Frame = +1

Query: 103  VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
            V+K+K+ ADGT+ +YKARLVAKG+ Q  G+DY DTFS VVK ATIRI+LSLAV+KGWS+R
Sbjct: 991  VYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLR 1050

Query: 283  QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
            Q+DV NAFL+G ++ ++YM QP GFE  +    VCKL K+LYGLKQA RAW S+    L+
Sbjct: 1051 QLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLM 1110

Query: 463  SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
             LGFK S+ DTSL++ +  D  + ++ YVDDIIV  + ++   +++ DL   F+LKDLG 
Sbjct: 1111 DLGFKGSKPDTSLFFLNKGDITMFVLVYVDDIIVASSSEKATAALLQDLKGEFALKDLGE 1170

Query: 643  LSYFLGIEVCHGQDGLFL 696
            L YFLGIEV   Q+G+ L
Sbjct: 1171 LHYFLGIEVSKVQNGIVL 1188



 Score = 42.7 bits (99), Expect(2) = 1e-62
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +3

Query: 3    WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
            WK AM  EYDAL+KN+TW L        +IGC+ +
Sbjct: 957  WKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWV 991


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  224 bits (572), Expect(2) = 3e-62
 Identities = 107/198 (54%), Positives = 147/198 (74%)
 Frame = +1

Query: 103  VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
            V+K+K+ ADGT+ +YKARLVAKG+ Q  G+DY DTFS VVK ATIRI+LS+AV++GWS+R
Sbjct: 983  VYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLR 1042

Query: 283  QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
            Q+DV NAFL+G ++ ++YM+QP GFE  S    VCKL K+LYGLKQA RAW S+    L+
Sbjct: 1043 QLDVQNAFLHGFLEEEVYMQQPPGFESSSKPDYVCKLDKALYGLKQAPRAWYSRLSKKLV 1102

Query: 463  SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
             LGF+ S+ADTSL++ +     + ++ YVDDIIV  + ++   +++ DL+  F+LKDLG 
Sbjct: 1103 ELGFEASKADTSLFFLNKGGILMFVLVYVDDIIVASSTEKATTALLKDLNKEFALKDLGD 1162

Query: 643  LSYFLGIEVCHGQDGLFL 696
            L YFLGIEV    +G+ L
Sbjct: 1163 LHYFLGIEVTKVSNGVIL 1180



 Score = 41.2 bits (95), Expect(2) = 3e-62
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +3

Query: 3    WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
            W+ AM+ EY+ALIKN TW L        +IGC+ +
Sbjct: 949  WRDAMETEYNALIKNDTWHLVPYEKGQNIIGCKWV 983


>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
          Length = 1074

 Score =  213 bits (543), Expect(2) = 6e-61
 Identities = 98/198 (49%), Positives = 143/198 (72%)
 Frame = +1

Query: 103  VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
            VFK+K   +G++ +YKARLVA+G++Q+ G+D+ +TFS VVKP TIR+VLS+AV+  W I+
Sbjct: 591  VFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVVKPCTIRLVLSIAVSSNWPIK 650

Query: 283  QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
            Q+DV NAFLNGD+   ++M QP GFE  S    VC+L+K+LYGLKQ  RAW  K  + L+
Sbjct: 651  QLDVHNAFLNGDLQEQVFMMQPPGFEDSSCPTHVCRLQKALYGLKQGPRAWFHKLSSFLL 710

Query: 463  SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
             +GF+ S+A+ SL+Y H     ++++ YVDDI++TG++   +  +I  LS+HF+L+DLG 
Sbjct: 711  QIGFQCSRANASLFYFHSASDIIILLIYVDDILITGSNPSRVHQIISQLSSHFALRDLGD 770

Query: 643  LSYFLGIEVCHGQDGLFL 696
            +SYFLGI+V      L L
Sbjct: 771  ISYFLGIKVTRLSHALHL 788



 Score = 47.8 bits (112), Expect(2) = 6e-61
 Identities = 19/35 (54%), Positives = 25/35 (71%)
 Frame = +3

Query: 3   WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
           WK AM+ EY AL+KNQTW L   P +AK+I C+ +
Sbjct: 557 WKLAMEQEYQALLKNQTWSLVPPPSNAKIIRCKWV 591


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  219 bits (559), Expect(2) = 8e-61
 Identities = 105/198 (53%), Positives = 144/198 (72%)
 Frame = +1

Query: 103  VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
            V+KVK+ ADGT+ +YK RL+AKG+ Q  G+DY DTFS VVK ATIRI+LS+AV++GWS+R
Sbjct: 986  VYKVKRKADGTLDRYKTRLIAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLR 1045

Query: 283  QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
            Q+DV N FL+G ++ ++YM+QP GFE  S    VCKL K+LYGLKQA RAW S+    L 
Sbjct: 1046 QLDVQNDFLHGFLEEEVYMQQPPGFESSSKPDYVCKLNKALYGLKQAPRAWYSRLSKKLT 1105

Query: 463  SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
             LGF+ S+ADTSL++ +     + ++ YVDDIIV  + ++   +++ DL+  F+LKDLG 
Sbjct: 1106 ELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIVASSTEKATTALLKDLNKEFTLKDLGD 1165

Query: 643  LSYFLGIEVCHGQDGLFL 696
            L YFLGIEV    +G+ L
Sbjct: 1166 LHYFLGIEVTKVSNGVIL 1183



 Score = 41.2 bits (95), Expect(2) = 8e-61
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +3

Query: 3    WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
            W+ AM+ EY+ALIKN TW L        +IGC+ +
Sbjct: 952  WRDAMETEYNALIKNDTWHLVPYEKGQNIIGCKWV 986


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  219 bits (557), Expect(2) = 8e-61
 Identities = 109/198 (55%), Positives = 139/198 (70%)
 Frame = +1

Query: 103  VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
            VFKVK+N DGT+ KYKARLVAKG++Q AG D+++TFS VVKP TIRIVL++A+   W +R
Sbjct: 929  VFKVKENXDGTINKYKARLVAKGFHQIAGFDFNETFSPVVKPTTIRIVLTIALNLQWKVR 988

Query: 283  QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
            Q+DV+NAFLNGD+  DI+M QP GF    +   VCKL KSLYGLKQA RAW  K    L 
Sbjct: 989  QLDVNNAFLNGDLHEDIFMHQPQGFIDPVNPNYVCKLNKSLYGLKQAPRAWFEKLHQALG 1048

Query: 463  SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
             LGF  +++D SL+          I+ YVDDI++TG +DQ +Q VI  L+  F+LKDLG 
Sbjct: 1049 ILGFSSTKSDQSLFINITPTHSTYILVYVDDILITGNNDQFVQHVITQLNNQFALKDLGD 1108

Query: 643  LSYFLGIEVCHGQDGLFL 696
            + YFLGI+V H   G+ L
Sbjct: 1109 IDYFLGIQVKHTSAGMHL 1126



 Score = 42.0 bits (97), Expect(2) = 8e-61
 Identities = 17/35 (48%), Positives = 23/35 (65%)
 Frame = +3

Query: 3   WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
           WK AM  EY AL++N TW+L   P   K+IGC+ +
Sbjct: 895 WKQAMTDEYLALLRNNTWDLVPPPTDRKLIGCKWV 929


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  218 bits (555), Expect(2) = 1e-60
 Identities = 101/198 (51%), Positives = 145/198 (73%)
 Frame = +1

Query: 103  VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
            V+K K+N DGTV KYKARLVAKG++Q AG D+++TFS VVKP+T+R+V ++A+++ W+I+
Sbjct: 983  VYKTKENPDGTVQKYKARLVAKGFHQQAGFDFTETFSPVVKPSTVRVVFTIALSRNWAIK 1042

Query: 283  QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
            Q+DV+NAFLNGD+  +++M+QP GF    +  LVC+L K+LYGLKQA RAW  K    L+
Sbjct: 1043 QLDVNNAFLNGDLQEEVFMQQPQGFIDEQNPNLVCRLHKALYGLKQAPRAWFEKLHRALL 1102

Query: 463  SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
            S GF  +++D SL+ R   +    ++ YVDDI+V G+    + S+I  L++ FSLKDLG 
Sbjct: 1103 SFGFVSAKSDQSLFLRFTPNHITYVLVYVDDILVIGSDTAAITSLIAQLNSEFSLKDLGE 1162

Query: 643  LSYFLGIEVCHGQDGLFL 696
            + YFLGI+V H  +GL L
Sbjct: 1163 VHYFLGIQVSHTNNGLHL 1180



 Score = 42.0 bits (97), Expect(2) = 1e-60
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +3

Query: 3    WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
            WK AM  EYDAL +N TW L  +P   + IGC+ +
Sbjct: 949  WKKAMVAEYDALQRNNTWSLVPLPAGRQAIGCKWV 983


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score =  219 bits (557), Expect(2) = 1e-60
 Identities = 104/198 (52%), Positives = 144/198 (72%)
 Frame = +1

Query: 103  VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
            V+KVK+ ADGT+ +YK RL+AKG+ Q  G+DY DTFS VVK ATIRI+LS+AV++GW++R
Sbjct: 986  VYKVKRKADGTLDRYKTRLIAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWNLR 1045

Query: 283  QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
            Q+DV N FL G ++ ++YM+QP GFE  S +  VCKL K+LYGLKQA RAW S+    L 
Sbjct: 1046 QLDVQNDFLRGFLEEEVYMQQPPGFESSSKRDYVCKLNKALYGLKQAPRAWYSRLSKKLT 1105

Query: 463  SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
             LGF+ S+ADTSL++ +     + ++ YVDDIIV  + ++   +++ DL+  F+LKDLG 
Sbjct: 1106 ELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIVASSTEKATTALLKDLNKEFTLKDLGD 1165

Query: 643  LSYFLGIEVCHGQDGLFL 696
            L YFLGIEV    +G+ L
Sbjct: 1166 LHYFLGIEVTKVSNGVIL 1183



 Score = 41.2 bits (95), Expect(2) = 1e-60
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +3

Query: 3    WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
            W+ AM+ EY+ALIKN TW L        +IGC+ +
Sbjct: 952  WRDAMETEYNALIKNDTWHLVPYEKGQNIIGCKWV 986


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  216 bits (551), Expect(2) = 4e-60
 Identities = 109/197 (55%), Positives = 145/197 (73%), Gaps = 2/197 (1%)
 Frame = +1

Query: 103  VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
            VFK+K+N DG+V++YKARLVAKGY+Q  G D+ +TFS VVKP TIR+VL++AV++ W IR
Sbjct: 793  VFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTTIRVVLAIAVSQSWCIR 852

Query: 283  QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQ--LVCKLKKSLYGLKQASRAWSSKFGNV 456
            Q+DV+NAFLNG++  ++YM+QP GF+  ++Q+  LVCKL K+LYGLKQA RAW  K    
Sbjct: 853  QLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALYGLKQAPRAWFDKLKIS 912

Query: 457  LISLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDL 636
            L   GF  +++D SL+ R    S + ++ YVDDI+VTG+  QE+  +I  L   FSLKDL
Sbjct: 913  LQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIHELISRLRGLFSLKDL 972

Query: 637  GSLSYFLGIEVCHGQDG 687
            G LSYFLGIEV    DG
Sbjct: 973  GELSYFLGIEVKKTADG 989



 Score = 42.0 bits (97), Expect(2) = 4e-60
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = +3

Query: 3   WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
           WK AM  E+ AL+KN+TW L ++P +   +GCR +
Sbjct: 759 WKEAMDEEFRALMKNKTWSLVSLPTNRTSVGCRWV 793


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score =  215 bits (548), Expect(2) = 4e-59
 Identities = 103/198 (52%), Positives = 144/198 (72%)
 Frame = +1

Query: 103  VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
            +FK K ++DG++ ++KARLVA+G++Q  GLD+ DTFS VV+PAT+RI+LSLAVT GW + 
Sbjct: 886  IFKTKLHSDGSIERHKARLVAQGFSQVHGLDFGDTFSPVVRPATVRIILSLAVTSGWRLH 945

Query: 283  QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
            Q+DV NAFL+G ++ ++YMEQP G+      Q VC+LK++LYGLKQA RAW  +F + L+
Sbjct: 946  QLDVKNAFLHGFLNEEVYMEQPPGYTDPQFPQHVCRLKRALYGLKQAPRAWFHRFSSFLL 1005

Query: 463  SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
              GF  SQAD+SL++ H     V ++ YVDD+I+TG+    + + I  LS  FS+KDLG 
Sbjct: 1006 KHGFHSSQADSSLFFYHSSLGTVYLLLYVDDMIITGSTPSLVHTFITRLSNEFSMKDLGD 1065

Query: 643  LSYFLGIEVCHGQDGLFL 696
            L YFLG+EV   + GLFL
Sbjct: 1066 LHYFLGVEVQANEKGLFL 1083



 Score = 39.7 bits (91), Expect(2) = 4e-59
 Identities = 18/35 (51%), Positives = 20/35 (57%)
 Frame = +3

Query: 3   WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
           W +AM  E  AL KN TW L   P H  V+GCR I
Sbjct: 852 WLSAMDDEIHALKKNDTWVLVPRPQHHNVVGCRWI 886


>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
           gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
           Japonica Group]
          Length = 821

 Score =  218 bits (556), Expect(2) = 4e-59
 Identities = 110/198 (55%), Positives = 144/198 (72%)
 Frame = +1

Query: 103 VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
           V+KVK+ ADG++ +YKARLVAKG+ Q  G+DY DTFS VVK ATIRIVLSLAV++GWS+R
Sbjct: 353 VYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLR 412

Query: 283 QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
           Q+DV NAFL+G ++ ++YMEQP G+E+ S    VCKL K+LYGLKQA RAW S+    L 
Sbjct: 413 QLDVKNAFLHGVLEEEVYMEQPPGYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLS 472

Query: 463 SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
            LGF  S+ADTSL++       + ++ YVDDII+  +      +++ +LS  F+LKDLG 
Sbjct: 473 ELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIMASSVPDATSTLLQELSKDFALKDLGD 532

Query: 643 LSYFLGIEVCHGQDGLFL 696
           L YFLGIEV   +DGL L
Sbjct: 533 LHYFLGIEVHKVKDGLML 550



 Score = 36.6 bits (83), Expect(2) = 4e-59
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +3

Query: 3   WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
           WK AM  EY ALI+N+TW L        VI C+ +
Sbjct: 319 WKEAMDAEYMALIENKTWHLVPPQKGRNVIDCKWV 353


>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
            Group]
          Length = 1399

 Score =  218 bits (555), Expect(2) = 6e-59
 Identities = 110/198 (55%), Positives = 144/198 (72%)
 Frame = +1

Query: 103  VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
            V+KVK+ ADG++ +YKARLVAKG+ Q  G+DY DTFS VVK ATIRIVLSLAV++GWS+R
Sbjct: 931  VYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLR 990

Query: 283  QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
            Q+DV NAFL+G ++ ++YM+QP G+E+ S    VCKL K+LYGLKQA RAW S+    L 
Sbjct: 991  QLDVKNAFLHGVLEEEVYMKQPPGYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLS 1050

Query: 463  SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
             LGF  S+ADTSL++       + ++ YVDDIIV  +      +++ +LS  F+LKDLG 
Sbjct: 1051 ELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIVASSVPDATSTLLQELSKDFALKDLGD 1110

Query: 643  LSYFLGIEVCHGQDGLFL 696
            L YFLGIEV   +DGL L
Sbjct: 1111 LHYFLGIEVHKVKDGLML 1128



 Score = 36.6 bits (83), Expect(2) = 6e-59
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +3

Query: 3    WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
            WK AM  EY ALI+N+TW L        VI C+ +
Sbjct: 897  WKEAMDAEYMALIENKTWHLVPPQKGRNVIDCKWV 931


>ref|XP_006579236.1| PREDICTED: uncharacterized protein LOC102665202 [Glycine max]
          Length = 1364

 Score =  211 bits (536), Expect(2) = 7e-59
 Identities = 103/188 (54%), Positives = 135/188 (71%)
 Frame = +1

Query: 103 VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLAVTKGWSIR 282
           +F++K+N DGT+ KYKARLVAKG+NQ  G DYSDT+S VVKP T+R VL++A+T  W + 
Sbjct: 205 IFRIKENPDGTINKYKARLVAKGFNQKYGQDYSDTYSPVVKPITVRTVLTIALTSKWPLI 264

Query: 283 QIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWSSKFGNVLI 462
           Q+DV+N FLNG +  D+YM+QP GF Q  S  LVCKL K++YGLKQA RAW     N LI
Sbjct: 265 QLDVNNVFLNGQLHEDVYMQQPQGFIQGES-TLVCKLHKAIYGLKQAPRAWYESLTNTLI 323

Query: 463 SLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTHFSLKDLGS 642
           S GF+ S+ D SL   +    C+LI+ YVDDII+TG+ +  +  ++  L+  FSLK LG+
Sbjct: 324 SFGFQQSKCDPSLLIFNKHGCCLLILIYVDDIIITGSSNTAINLIVNKLNATFSLKQLGT 383

Query: 643 LSYFLGIE 666
           L YFLGIE
Sbjct: 384 LEYFLGIE 391



 Score = 43.5 bits (101), Expect(2) = 7e-59
 Identities = 18/35 (51%), Positives = 22/35 (62%)
 Frame = +3

Query: 3   WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
           W  AMQ EY AL  N+TW L  +P H + IGC+ I
Sbjct: 171 WTEAMQQEYQALQANKTWSLVPLPPHKRAIGCKWI 205


>emb|CAH66819.1| OSIGBa0093K19.6 [Oryza sativa Indica Group]
          Length = 472

 Score =  214 bits (544), Expect(2) = 1e-58
 Identities = 107/206 (51%), Positives = 144/206 (69%), Gaps = 1/206 (0%)
 Frame = +1

Query: 82  RRLLDVD-VFKVKQNADGTVAKYKARLVAKGYNQSAGLDYSDTFSSVVKPATIRIVLSLA 258
           R ++D   V+KVK+ A G++ +YKARLVAKG+ Q  G+DY DTFS VVK  TIR +LS+A
Sbjct: 164 RNIIDCKWVYKVKRKAYGSLDRYKARLVAKGFKQRYGIDYEDTFSHVVKATTIRTILSIA 223

Query: 259 VTKGWSIRQIDVDNAFLNGDIDTDIYMEQPLGFEQCSSQQLVCKLKKSLYGLKQASRAWS 438
           V++GWS RQ+DV NAFL+G ++ +++M+QP G+E       +CKL K+LYGLKQA RAW 
Sbjct: 224 VSRGWSFRQLDVQNAFLHGILEEEVHMKQPSGYENSKFPNHICKLDKALYGLKQAPRAWY 283

Query: 439 SKFGNVLISLGFKVSQADTSLYYRHHEDSCVLIMAYVDDIIVTGTHDQELQSVILDLSTH 618
           SK    L +LGFK S ADTSL++    D  V ++ YVDDIIV  +      +++ DL+  
Sbjct: 284 SKLSTKLQALGFKPSMADTSLFFYSKGDVNVFVLIYVDDIIVASSTPSATSALLQDLTKE 343

Query: 619 FSLKDLGSLSYFLGIEVCHGQDGLFL 696
           F+LKDLG L YFLGIEV   +DG+ L
Sbjct: 344 FALKDLGELHYFLGIEVTRTEDGILL 369



 Score = 39.7 bits (91), Expect(2) = 1e-58
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 3   WKAAMQIEYDALIKNQTWELTTVPDHAKVIGCRCI 107
           W+ AM  EY AL+KNQTW L  +     +I C+ +
Sbjct: 138 WREAMDAEYQALMKNQTWHLVPLQQGRNIIDCKWV 172