BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00021229
         (838 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614...   322   8e-86
ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626...   320   5e-85
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607...   315   1e-83
ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608...   306   5e-81
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   303   7e-80
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             298   1e-78
ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623...   287   3e-75
dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]                   283   5e-74
gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsi...   280   5e-73
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             277   4e-72
ref|XP_004308263.1| PREDICTED: uncharacterized protein LOC101303...   276   7e-72
ref|XP_003633313.1| PREDICTED: uncharacterized protein LOC100854...   272   1e-70
gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...   270   6e-70
gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                269   8e-70
emb|CAN71052.1| hypothetical protein VITISV_003719 [Vitis vinifera]   265   2e-68
gb|ABD63162.1| RNase H family protein [Asparagus officinalis]         263   8e-68
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]               261   2e-67
ref|XP_004292410.1| PREDICTED: uncharacterized protein LOC101297...   261   2e-67
gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subc...   261   3e-67
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...   259   1e-66

>ref|XP_006478539.1| PREDICTED: uncharacterized protein LOC102614166 [Citrus sinensis]
          Length = 1089

 Score =  322 bits (826), Expect = 8e-86
 Identities = 152/259 (58%), Positives = 196/259 (75%)
 Frame = +2

Query: 62   KRKRAEPVEQVDTINVGRPSEGRQLRIGHDLPEPYRSELVEFLGNNLDVFAWTHADMPGI 241
            K  R EPVE+++ + + R    R +++G +L E  ++ELV+ L ++ DVFAW+H DMPGI
Sbjct: 616  KNGRQEPVEKLEEVVISRSDPSRVVKVGSELGEAIKAELVKCLQSHADVFAWSHEDMPGI 675

Query: 242  DPKYACHRLNIDLTFRPVIQKRRKLGPDRQAALEIEVNKLLDNQFIREALYPRWVANPVL 421
            D   ACH+L +    RPV QKRR    +R  A+  EV KLL   FIREA YP W++N VL
Sbjct: 676  DRGIACHKLAVKRGARPVRQKRRCFNHERYEAINAEVEKLLKAGFIREAKYPEWISNVVL 735

Query: 422  VKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELMSFMDAYSGYNQIRMHP 601
            VKK+NG+WR+CVDFTDLNKACPKDS+PLP ID +VD+TAGH L+SFMDA+SGYNQI M+ 
Sbjct: 736  VKKANGKWRMCVDFTDLNKACPKDSFPLPKIDQLVDSTAGHGLLSFMDAFSGYNQIPMNE 795

Query: 602  EDEENTSFFSARGIHCYKMMPFGLKNAGATYQRLVNKMFEKMIGHTMEVYVDDMLVKSLY 781
            +DEENT+F +  G+ CY+MMPFGLKNAGATYQRLVNK+F+ +IGHTMEVYVDDM+ KS  
Sbjct: 796  QDEENTTFITNMGLFCYRMMPFGLKNAGATYQRLVNKIFKPLIGHTMEVYVDDMITKSRE 855

Query: 782  MSDHLNDLNKMFAVLREYK 838
              DH+  L + F +LR+Y+
Sbjct: 856  PRDHVKHLEETFELLRKYE 874


>ref|XP_006464891.1| PREDICTED: uncharacterized protein LOC102626228 [Citrus sinensis]
          Length = 1189

 Score =  320 bits (819), Expect = 5e-85
 Identities = 153/259 (59%), Positives = 195/259 (75%)
 Frame = +2

Query: 62   KRKRAEPVEQVDTINVGRPSEGRQLRIGHDLPEPYRSELVEFLGNNLDVFAWTHADMPGI 241
            K+ R EPVE ++T+++G  + G+ +RIG  L    + ELV+ L  + DVFAWTH DMPGI
Sbjct: 718  KKGRQEPVEDLETVSLGPENPGKTIRIGSRLEGEQKQELVKCLQAHADVFAWTHEDMPGI 777

Query: 242  DPKYACHRLNIDLTFRPVIQKRRKLGPDRQAALEIEVNKLLDNQFIREALYPRWVANPVL 421
            DP+ ACHRL I    R V QKRR    +R  A+  EV KLL   FIRE  YP W++N VL
Sbjct: 778  DPEVACHRLAIKKGARAVRQKRRCFNQERYEAINGEVEKLLRAGFIREVSYPEWISNVVL 837

Query: 422  VKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELMSFMDAYSGYNQIRMHP 601
            VKK+NG+WR+CVDFTDLNKACPKDS+PLP ID +VD+TAGH L+SFMDA+SGYNQI M+ 
Sbjct: 838  VKKANGKWRMCVDFTDLNKACPKDSFPLPKIDQLVDSTAGHGLLSFMDAFSGYNQIPMYE 897

Query: 602  EDEENTSFFSARGIHCYKMMPFGLKNAGATYQRLVNKMFEKMIGHTMEVYVDDMLVKSLY 781
             DEE+T+F + +G+ CY++MPFGLKNAGATYQRLVNK+F+ +IG TMEVYVDDM+ KS  
Sbjct: 898  PDEESTAFITNQGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGKTMEVYVDDMITKSKV 957

Query: 782  MSDHLNDLNKMFAVLREYK 838
              +H+  L + F +LR+YK
Sbjct: 958  PKEHVRHLEETFELLRKYK 976


>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
          Length = 1866

 Score =  315 bits (807), Expect = 1e-83
 Identities = 149/259 (57%), Positives = 192/259 (74%)
 Frame = +2

Query: 62   KRKRAEPVEQVDTINVGRPSEGRQLRIGHDLPEPYRSELVEFLGNNLDVFAWTHADMPGI 241
            K  R EPVE++  + V R    + +++G +L E  + ELV+ L ++ D+FAW+H DMPGI
Sbjct: 783  KNGRQEPVEKLKEVVVSRSDPSKVVKVGSELGEAIKGELVKCLQSHADIFAWSHEDMPGI 842

Query: 242  DPKYACHRLNIDLTFRPVIQKRRKLGPDRQAALEIEVNKLLDNQFIREALYPRWVANPVL 421
            D   ACH+L +    RPV QKRR    +R  A+  EV KLL   FIREA YP W++N VL
Sbjct: 843  DRGIACHKLAVKRGARPVRQKRRCFNHERYEAINAEVEKLLKAGFIREAKYPEWISNVVL 902

Query: 422  VKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELMSFMDAYSGYNQIRMHP 601
            VKK+NG+WR+CVDFTDLNKACPKDS+PLP ID +VD+TAGH L+SFMDA+SGYNQI M+ 
Sbjct: 903  VKKANGKWRMCVDFTDLNKACPKDSFPLPKIDQLVDSTAGHSLLSFMDAFSGYNQIPMNE 962

Query: 602  EDEENTSFFSARGIHCYKMMPFGLKNAGATYQRLVNKMFEKMIGHTMEVYVDDMLVKSLY 781
            +DEE+T+F +  G+ CY++MPFGLKNAGATYQRLVNK+F+ +IG TMEVYVDDM+ KS  
Sbjct: 963  QDEESTTFITNMGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGRTMEVYVDDMITKSRE 1022

Query: 782  MSDHLNDLNKMFAVLREYK 838
              DH+  L + F +LR YK
Sbjct: 1023 PRDHVKHLEETFELLRRYK 1041


>ref|XP_006495009.1| PREDICTED: uncharacterized protein LOC102608416 [Citrus sinensis]
          Length = 1313

 Score =  306 bits (785), Expect = 5e-81
 Identities = 144/252 (57%), Positives = 187/252 (74%)
 Frame = +2

Query: 62   KRKRAEPVEQVDTINVGRPSEGRQLRIGHDLPEPYRSELVEFLGNNLDVFAWTHADMPGI 241
            K  R EPVE+++ + V R    R +++G +L    ++ELV+ L ++ D+FAW+H DMPGI
Sbjct: 628  KNGRQEPVEKLEEVVVSRSDPSRVVKVGSELGREIKTELVKCLQSHADIFAWSHEDMPGI 687

Query: 242  DPKYACHRLNIDLTFRPVIQKRRKLGPDRQAALEIEVNKLLDNQFIREALYPRWVANPVL 421
            D + ACH+L +    RPV QKRR     R   +  EV KLL   FIREA YP W++N VL
Sbjct: 688  DRRIACHKLAVKKGARPVRQKRRCFNHKRYETINAEVEKLLKAGFIREAKYPEWISNVVL 747

Query: 422  VKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELMSFMDAYSGYNQIRMHP 601
            VKK+NG+WR+CVDFTDLNKACPKDS+PL  ID +VD+TAGH L+SFMDA+SGYNQI M+ 
Sbjct: 748  VKKANGKWRMCVDFTDLNKACPKDSFPLQKIDQLVDSTAGHSLLSFMDAFSGYNQIPMNE 807

Query: 602  EDEENTSFFSARGIHCYKMMPFGLKNAGATYQRLVNKMFEKMIGHTMEVYVDDMLVKSLY 781
            +DEE+T+F +  G+ CY++MPFGLKNAGATYQRLVNK+F+ +IGHTMEVYVDDM+ KS  
Sbjct: 808  QDEESTTFITNMGLFCYRVMPFGLKNAGATYQRLVNKVFKPLIGHTMEVYVDDMITKSRE 867

Query: 782  MSDHLNDLNKMF 817
              DH+  L + F
Sbjct: 868  PRDHVKHLEETF 879


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  303 bits (775), Expect = 7e-80
 Identities = 143/245 (58%), Positives = 177/245 (72%)
 Frame = +2

Query: 101  INVGRPSEGRQLRIGHDLPEPYRSELVEFLGNNLDVFAWTHADMPGIDPKYACHRLNIDL 280
            +N+      R + I  DLP   ++ELV FL  N   FAW+  DMPGID    CH LN+D 
Sbjct: 719  VNIDESDPSRCVGIRIDLPSELQNELVNFLRQNAATFAWSVEDMPGIDSAVTCHELNVDP 778

Query: 281  TFRPVIQKRRKLGPDRQAALEIEVNKLLDNQFIREALYPRWVANPVLVKKSNGQWRLCVD 460
            T++P+ QKRRKLGPDR   +  EV KLLD   I E  YP W+ NPV+VKK NG+WR+C+D
Sbjct: 779  TYKPLKQKRRKLGPDRTKDVNEEVKKLLDAGSIVEVRYPDWLRNPVVVKKKNGKWRVCID 838

Query: 461  FTDLNKACPKDSYPLPNIDYMVDATAGHELMSFMDAYSGYNQIRMHPEDEENTSFFSARG 640
            FTDLNKACPKDS+PLP+ID +V+ATAG+EL+SFMDA+SGYNQI MH  D E T F + +G
Sbjct: 839  FTDLNKACPKDSFPLPHIDRLVEATAGNELLSFMDAFSGYNQILMHQNDREKTVFITDQG 898

Query: 641  IHCYKMMPFGLKNAGATYQRLVNKMFEKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFA 820
             +CYK+MPFGLKNAGATY RLVN+MF   + H+MEVY+DDMLVKSL   +H+  L + F 
Sbjct: 899  TYCYKVMPFGLKNAGATYPRLVNQMFTDQLDHSMEVYIDDMLVKSLRAEEHITHLRQCFQ 958

Query: 821  VLREY 835
            VL  Y
Sbjct: 959  VLNRY 963


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  298 bits (764), Expect = 1e-78
 Identities = 147/265 (55%), Positives = 185/265 (69%), Gaps = 1/265 (0%)
 Frame = +2

Query: 44   KEGQSKKRKRAEP-VEQVDTINVGRPSEGRQLRIGHDLPEPYRSELVEFLGNNLDVFAWT 220
            KE ++  R   E  + + + +N+      R + +G ++    R EL+  L  N   FAW+
Sbjct: 741  KEAKTPSRSYEESELCRTEMVNIDESDPTRCVGVGAEISPSIRLELIALLKRNSKTFAWS 800

Query: 221  HADMPGIDPKYACHRLNIDLTFRPVIQKRRKLGPDRQAALEIEVNKLLDNQFIREALYPR 400
              DM GIDP    H LN+D TF+PV QKRRKLGP+R  A+  EV KLL    I E  YP 
Sbjct: 801  IEDMKGIDPAITAHELNVDPTFKPVKQKRRKLGPERARAVNEEVEKLLKAGQIIEVKYPE 860

Query: 401  WVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELMSFMDAYSGY 580
            W+ANPV+VKK NG+WR+CVD+TDLNKACPKDSYPLP+ID +V+AT+G+ L+SFMDA+SGY
Sbjct: 861  WLANPVVVKKKNGKWRVCVDYTDLNKACPKDSYPLPHIDRLVEATSGNGLLSFMDAFSGY 920

Query: 581  NQIRMHPEDEENTSFFSARGIHCYKMMPFGLKNAGATYQRLVNKMFEKMIGHTMEVYVDD 760
            NQI MH +D+E TSF + RG +CYK+M FGLKNAGATYQR VNKM    IG T+EVY+DD
Sbjct: 921  NQILMHKDDQEKTSFVTDRGTYCYKVMSFGLKNAGATYQRFVNKMLADQIGRTVEVYIDD 980

Query: 761  MLVKSLYMSDHLNDLNKMFAVLREY 835
            MLVKSL   DH+  L+K F VL  Y
Sbjct: 981  MLVKSLKPEDHVEHLSKCFDVLNTY 1005


>ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623105 [Citrus sinensis]
          Length = 1407

 Score =  287 bits (735), Expect = 3e-75
 Identities = 139/225 (61%), Positives = 172/225 (76%), Gaps = 1/225 (0%)
 Frame = +2

Query: 167  RSELVEFLGN-NLDVFAWTHADMPGIDPKYACHRLNIDLTFRPVIQKRRKLGPDRQAALE 343
            R E VE L   + DVFAWTH DMPGIDP+ ACH+L +    R V QKRR    +R  A+ 
Sbjct: 830  RQEPVEDLETAHADVFAWTHEDMPGIDPEVACHKLAMKKGARAVRQKRRCFNQERYEAVN 889

Query: 344  IEVNKLLDNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYM 523
             EV KLL   FIRE  YP W++N VLVKK+NG+WR+CVDFTDLNKACPKDS+PLP ID +
Sbjct: 890  DEVEKLLRAGFIREVNYPEWISNVVLVKKANGKWRMCVDFTDLNKACPKDSFPLPKIDQL 949

Query: 524  VDATAGHELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIHCYKMMPFGLKNAGATYQRL 703
            VD+TAGH L+SFMDA+SGYNQI M+  DEE+T+F + +G+ CY++MPFGLKNAGATYQRL
Sbjct: 950  VDSTAGHGLLSFMDAFSGYNQIPMYEPDEESTAFITNQGLFCYRVMPFGLKNAGATYQRL 1009

Query: 704  VNKMFEKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYK 838
            VNK+F+ +IG TMEVYVDDM+ KS    +H+  L + F +LR+YK
Sbjct: 1010 VNKVFKPLIGKTMEVYVDDMITKSKVPKEHVRHLEETFELLRKYK 1054


>dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]
          Length = 1542

 Score =  283 bits (724), Expect = 5e-74
 Identities = 141/263 (53%), Positives = 186/263 (70%)
 Frame = +2

Query: 50   GQSKKRKRAEPVEQVDTINVGRPSEGRQLRIGHDLPEPYRSELVEFLGNNLDVFAWTHAD 229
            G SKK  R EPVE++D + V + +  R ++IG  L E  + ELV++L +  D+FAW+H D
Sbjct: 703  GDSKKG-RQEPVEKLDEVFVNKSNPSRMVKIGSGLGETIKGELVKYLQSYADIFAWSHED 761

Query: 230  MPGIDPKYACHRLNIDLTFRPVIQKRRKLGPDRQAALEIEVNKLLDNQFIREALYPRWVA 409
            MP ID   A H+L I     PV QKRR    +R  A+  EV +LL   FIR+  Y  W++
Sbjct: 762  MPRIDHGIAYHKLAIRKGAMPVRQKRRCFNQERYEAINAEVEQLLKAGFIRKTKYSEWIS 821

Query: 410  NPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELMSFMDAYSGYNQI 589
            N +LVKK++   R+CVDFTDLNKACPKDS+PL  ID +VD+TAGH L+SFMD +SGYNQI
Sbjct: 822  NVILVKKAS---RMCVDFTDLNKACPKDSFPLQKIDQLVDSTAGHSLLSFMDTFSGYNQI 878

Query: 590  RMHPEDEENTSFFSARGIHCYKMMPFGLKNAGATYQRLVNKMFEKMIGHTMEVYVDDMLV 769
             M  +DEE+T+F +  G+ CY++MPFGLKN GATYQRLVNK+F+ +IGHTMEVYVDDM+ 
Sbjct: 879  PMDEQDEESTTFITNIGLFCYRVMPFGLKNTGATYQRLVNKIFKPLIGHTMEVYVDDMIT 938

Query: 770  KSLYMSDHLNDLNKMFAVLREYK 838
            KS    DH+  L + F +LR+Y+
Sbjct: 939  KSKKPKDHVKHLEETFELLRKYE 961


>gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 764

 Score =  280 bits (716), Expect = 5e-73
 Identities = 131/203 (64%), Positives = 159/203 (78%)
 Frame = +2

Query: 227  DMPGIDPKYACHRLNIDLTFRPVIQKRRKLGPDRQAALEIEVNKLLDNQFIREALYPRWV 406
            DM GIDP+ ACH LN+D TF+ V QKRRKLGP+R  A+  EV+KLLD   I E  YP W+
Sbjct: 476  DMVGIDPEVACHELNVDPTFKLVKQKRRKLGPERSKAVNDEVDKLLDAGSIVEVKYPEWL 535

Query: 407  ANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELMSFMDAYSGYNQ 586
            ANPV+VKK N +WR+C+DFTDLNKACPKDS+PLP+ID MV+AT G+EL+SFMDA+SGYNQ
Sbjct: 536  ANPVVVKKKNDKWRVCIDFTDLNKACPKDSFPLPHIDRMVEATTGNELLSFMDAFSGYNQ 595

Query: 587  IRMHPEDEENTSFFSARGIHCYKMMPFGLKNAGATYQRLVNKMFEKMIGHTMEVYVDDML 766
            I MH +D+E TSF   RG +CYK+MPFGLKN GA YQRLVN+MF   +G TMEVY+DDML
Sbjct: 596  IPMHKDDQEKTSFIIDRGTYCYKVMPFGLKNVGARYQRLVNQMFAPQLGKTMEVYIDDML 655

Query: 767  VKSLYMSDHLNDLNKMFAVLREY 835
            VKS   +DH++ L   F  L +Y
Sbjct: 656  VKSTRSADHIDHLKACFETLNKY 678


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  277 bits (708), Expect = 4e-72
 Identities = 130/203 (64%), Positives = 162/203 (79%)
 Frame = +2

Query: 230 MPGIDPKYACHRLNIDLTFRPVIQKRRKLGPDRQAALEIEVNKLLDNQFIREALYPRWVA 409
           MPGI+P   CH LN+D +F+PV QKRRKLG +R   +  EV+KLL    IRE  YP WVA
Sbjct: 1   MPGINPSIICHELNVDPSFKPVKQKRRKLGVERAKIVNDEVDKLLKIGSIREVQYPEWVA 60

Query: 410 NPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELMSFMDAYSGYNQI 589
           N V+VKK NG+ R+C+DFTDLNKACPKDS+PLP+ID +V++TAG+EL++FMDA+SG NQI
Sbjct: 61  NTVVVKKKNGKDRVCIDFTDLNKACPKDSFPLPHIDRLVESTAGNELLTFMDAFSGSNQI 120

Query: 590 RMHPEDEENTSFFSARGIHCYKMMPFGLKNAGATYQRLVNKMFEKMIGHTMEVYVDDMLV 769
            M+PED+E TSF + RGI+CYK+MPFGLKNAGATYQRLVNKMF   +G TMEVY+DDMLV
Sbjct: 121 MMNPEDQEKTSFITDRGIYCYKVMPFGLKNAGATYQRLVNKMFHNHLGKTMEVYIDDMLV 180

Query: 770 KSLYMSDHLNDLNKMFAVLREYK 838
           KSL   DH+  L + F +L +Y+
Sbjct: 181 KSLKKEDHVKHLEECFGILNKYQ 203


>ref|XP_004308263.1| PREDICTED: uncharacterized protein LOC101303281 [Fragaria vesca
            subsp. vesca]
          Length = 488

 Score =  276 bits (706), Expect = 7e-72
 Identities = 133/274 (48%), Positives = 189/274 (68%), Gaps = 2/274 (0%)
 Frame = +2

Query: 11   PAAEDELPLQIKEGQSKKRK--RAEPVEQVDTINVGRPSEGRQLRIGHDLPEPYRSELVE 184
            P+   + P    EG+ KK++  R  P E  + +++   +  R++RI  +L      +L+ 
Sbjct: 215  PSESIDDPRDDLEGKDKKKQAPRPNPAEDTEWVSLSPSAPERKVRIATNLDRELHQKLIT 274

Query: 185  FLGNNLDVFAWTHADMPGIDPKYACHRLNIDLTFRPVIQKRRKLGPDRQAALEIEVNKLL 364
            FL +   VF W++ADMP I P    H+LNI   + PV QKRR    ++  A++ +V +L 
Sbjct: 275  FLQDKQTVFVWSYADMPDIFPDVITHKLNILKDYPPVKQKRRAFNLEKYRAIQAKVQRLK 334

Query: 365  DNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGH 544
            + +FIRE  YP WV+N V+V K NG+WR+CVD+T+LNKACP DS+PLP ID +VD+T G 
Sbjct: 335  EIKFIREISYPTWVSNVVMVPKPNGKWRMCVDYTNLNKACPMDSFPLPRIDQLVDSTVGF 394

Query: 545  ELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIHCYKMMPFGLKNAGATYQRLVNKMFEK 724
            +++SF+DAYSGYNQI+MHP D+E+T+F + +G++CY++MPFGLKNAGATYQRLVN M E+
Sbjct: 395  KMLSFLDAYSGYNQIKMHPTDQEHTTFVTDKGLYCYEVMPFGLKNAGATYQRLVNAMSEE 454

Query: 725  MIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVL 826
             IG  MEVYVDDMLVK     D + +L+K+F  L
Sbjct: 455  EIGEVMEVYVDDMLVKRKTDEDRIANLDKVFTKL 488


>ref|XP_003633313.1| PREDICTED: uncharacterized protein LOC100854367 [Vitis vinifera]
          Length = 955

 Score =  272 bits (695), Expect = 1e-70
 Identities = 125/223 (56%), Positives = 167/223 (74%)
 Frame = +2

Query: 167  RSELVEFLGNNLDVFAWTHADMPGIDPKYACHRLNIDLTFRPVIQKRRKLGPDRQAALEI 346
            R EL   L  N D+FAWTH DM GI P  A HRLNI  + +PV QK ++  PD+Q  ++ 
Sbjct: 548  REELQNVLQQNRDIFAWTHFDMTGIHPTIASHRLNILASSKPVQQKVQRFHPDKQKVIQD 607

Query: 347  EVNKLLDNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMV 526
            E+ K L+  FIRE  YP W+AN V+V K  G+WR+CVD+T+LN AC KDS+PLP ID +V
Sbjct: 608  EMEKFLEAGFIREVEYPEWLANAVVVPKKGGKWRVCVDYTNLNNACSKDSFPLPRIDQIV 667

Query: 527  DATAGHELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIHCYKMMPFGLKNAGATYQRLV 706
            DATAGHE++SF+DA+SGY+QI M PEDEE T+F +  G++CYK+MPFGLKNAGATYQ+L+
Sbjct: 668  DATAGHEVLSFLDAFSGYHQIPMAPEDEEKTTFITPHGLYCYKVMPFGLKNAGATYQKLM 727

Query: 707  NKMFEKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREY 835
             K+F+ +IG  +EVY+DD++VKS   ++H   L K+F +LR+Y
Sbjct: 728  TKIFKPLIGDIIEVYIDDVVVKSKTRNEHAQHLQKVFHLLRQY 770


>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score =  270 bits (689), Expect = 6e-70
 Identities = 128/258 (49%), Positives = 176/258 (68%), Gaps = 1/258 (0%)
 Frame = +2

Query: 68   KRAEPVE-QVDTINVGRPSEGRQLRIGHDLPEPYRSELVEFLGNNLDVFAWTHADMPGID 244
            +R  P E +V  IN+G  S  + + I  DL    +  L+  +   +DVFAW + DMPG+D
Sbjct: 607  QREPPTEDKVIQINMGDESNPKPIFIAEDLSSSEKENLISLIREYIDVFAWNYEDMPGLD 666

Query: 245  PKYACHRLNIDLTFRPVIQKRRKLGPDRQAALEIEVNKLLDNQFIREALYPRWVANPVLV 424
            PK A HRLNID   +PV Q++R+  P+   ++E EV KL+D+ F+RE  +P WVAN V V
Sbjct: 667  PKVAMHRLNIDPDVKPVKQQQRRFRPEIMESIESEVKKLIDSGFVREEQHPDWVANIVPV 726

Query: 425  KKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELMSFMDAYSGYNQIRMHPE 604
             K NG+ R+C+DF DLN  CPKD +PLP  D M+D T G+E MSFMD +SGYNQI+MHP+
Sbjct: 727  PKKNGKVRICIDFRDLNATCPKDEFPLPITDVMIDNTCGYERMSFMDGFSGYNQIKMHPD 786

Query: 605  DEENTSFFSARGIHCYKMMPFGLKNAGATYQRLVNKMFEKMIGHTMEVYVDDMLVKSLYM 784
            DE++T+F +  G++CY +MPFGLKNAGATYQR +N +F + +   +E YVDD+ VKS   
Sbjct: 787  DEKHTAFRTPLGVYCYTVMPFGLKNAGATYQRAMNTIFHEHLRKKIECYVDDVAVKSQCK 846

Query: 785  SDHLNDLNKMFAVLREYK 838
             DHL DL  MF ++R ++
Sbjct: 847  DDHLADLKTMFEIMRAHQ 864


>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score =  269 bits (688), Expect = 8e-70
 Identities = 132/273 (48%), Positives = 182/273 (66%), Gaps = 9/273 (3%)
 Frame = +2

Query: 47  EGQSKKRKRAEPV---------EQVDTINVGRPSEGRQLRIGHDLPEPYRSELVEFLGNN 199
           E  S+ +K A+ V         E++D I + R  + R   +G  LP   R E+V+FL +N
Sbjct: 4   EALSQLKKSAQEVGVDKDGGSAEELDKIFI-REDKERYFSVGSQLPALEREEVVQFLQDN 62

Query: 200 LDVFAWTHADMPGIDPKYACHRLNIDLTFRPVIQKRRKLGPDRQAALEIEVNKLLDNQFI 379
           +DVFAWT  D+ GIDP++ CH LN+     P  Q  R    +   A++ EVNKL     I
Sbjct: 63  IDVFAWTTYDVSGIDPEFICHHLNVSHNAMPRKQPPRHASQEHAEAVKEEVNKLKQAGAI 122

Query: 380 REALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELMSF 559
           +E  YP W+AN V+VKK NG+WR+CVDFTDLNKACPKD +P+P ID +VDAT  H  MSF
Sbjct: 123 KEIFYPEWLANTVVVKKKNGKWRVCVDFTDLNKACPKDPFPIPRIDQLVDATVRHPRMSF 182

Query: 560 MDAYSGYNQIRMHPEDEENTSFFSARGIHCYKMMPFGLKNAGATYQRLVNKMFEKMIGHT 739
           +DA+  Y+QI M   D+E T+F +  G + Y++MPFGLKNAG+TYQR+V +MF+  +G T
Sbjct: 183 LDAFQNYHQIPMSLNDQEKTAFRTPNGNYHYRVMPFGLKNAGSTYQRMVTRMFDSQLGRT 242

Query: 740 MEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYK 838
           ME Y+DDM++KS  + DHL DL++ F+VLR++K
Sbjct: 243 MEAYIDDMVIKSKKVGDHLKDLHETFSVLRKHK 275


>emb|CAN71052.1| hypothetical protein VITISV_003719 [Vitis vinifera]
          Length = 944

 Score =  265 bits (677), Expect = 2e-68
 Identities = 119/216 (55%), Positives = 165/216 (76%)
 Frame = +2

Query: 188 LGNNLDVFAWTHADMPGIDPKYACHRLNIDLTFRPVIQKRRKLGPDRQAALEIEVNKLLD 367
           L +N D+FAWTH+DM GI P  A H+LN+    RP+ QK R+  PDRQ  ++ E+NKLL+
Sbjct: 13  LRSNHDIFAWTHSDMKGIHPSIASHKLNVFPAARPIRQKIRRFHPDRQRXIQDEINKLLE 72

Query: 368 NQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHE 547
             FIRE  YP W+AN V+V K  G+WR+CVD+T+LN ACPKDS+PLP ID +VD+T+G  
Sbjct: 73  AGFIREVSYPDWLANVVVVPKKEGKWRVCVDYTNLNNACPKDSFPLPRIDQIVDSTSGQG 132

Query: 548 LMSFMDAYSGYNQIRMHPEDEENTSFFSARGIHCYKMMPFGLKNAGATYQRLVNKMFEKM 727
           ++SF+DA+SGY+QI M P+DEE T+F +   ++CYK+MPFGLKNAGATYQRL+ K+F+ +
Sbjct: 133 MLSFLDAFSGYHQIPMSPDDEEKTAFITPHXLYCYKVMPFGLKNAGATYQRLMTKIFKPL 192

Query: 728 IGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREY 835
           IG ++EVY+DD++VKS     H+  L ++F +LR+Y
Sbjct: 193 IGRSVEVYIDDIVVKSKTREQHILHLQEVFYLLRKY 228


>gb|ABD63162.1| RNase H family protein [Asparagus officinalis]
          Length = 1189

 Score =  263 bits (671), Expect = 8e-68
 Identities = 124/258 (48%), Positives = 176/258 (68%), Gaps = 1/258 (0%)
 Frame = +2

Query: 68  KRAEPVE-QVDTINVGRPSEGRQLRIGHDLPEPYRSELVEFLGNNLDVFAWTHADMPGID 244
           +R  P E +V  +N+G   + + + I  DL    + +L+  +   +DVFAW + DMPG+D
Sbjct: 103 QREPPTEDKVIQVNMGDEHDPKPIFIAEDLSSSEKEDLISLIREYIDVFAWNYEDMPGLD 162

Query: 245 PKYACHRLNIDLTFRPVIQKRRKLGPDRQAALEIEVNKLLDNQFIREALYPRWVANPVLV 424
           PK A H LNID   +PV Q++R+  P+   ++E EV KL+D+ F+RE  +P WVAN V V
Sbjct: 163 PKVAMHHLNIDPDAKPVKQQQRRFRPEIMESIESEVKKLIDSGFVREEQHPDWVANIVPV 222

Query: 425 KKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELMSFMDAYSGYNQIRMHPE 604
            K NG+ R+C+DF DLN ACPKD +PLP  D M+D T G+E MSFMD +SGYNQI+MHP+
Sbjct: 223 PKKNGKVRICIDFRDLNAACPKDEFPLPITDVMIDNTCGYERMSFMDGFSGYNQIKMHPD 282

Query: 605 DEENTSFFSARGIHCYKMMPFGLKNAGATYQRLVNKMFEKMIGHTMEVYVDDMLVKSLYM 784
           DE++T+F +  G++CY +MPFGLKNAGATYQR +N +F + +   +E  VDD+ VKS   
Sbjct: 283 DEKHTAFRTPLGVYCYTVMPFGLKNAGATYQRAMNTIFHEHLRKKIECCVDDIAVKSQCK 342

Query: 785 SDHLNDLNKMFAVLREYK 838
            DHL +L  MF ++R ++
Sbjct: 343 GDHLTNLKIMFEIMRAHQ 360


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score =  261 bits (668), Expect = 2e-67
 Identities = 124/237 (52%), Positives = 169/237 (71%)
 Frame = +2

Query: 128  RQLRIGHDLPEPYRSELVEFLGNNLDVFAWTHADMPGIDPKYACHRLNIDLTFRPVIQKR 307
            R+  +G  L    R  + + L  N D+FAWT ADMPG+      HRL++    RP+ QK+
Sbjct: 847  RKTYMGTSLKPDDRETIGKTLTKNADLFAWTAADMPGVKSDVITHRLSVYTEARPIAQKK 906

Query: 308  RKLGPDRQAALEIEVNKLLDNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACP 487
            RKLG +R+ A   E +KL+   FI++A Y  W+AN V+VKK+NG+WR+CVD+TDLNKACP
Sbjct: 907  RKLGEERRKAAREETDKLIQAGFIQKAHYTTWLANVVMVKKTNGKWRMCVDYTDLNKACP 966

Query: 488  KDSYPLPNIDYMVDATAGHELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIHCYKMMPF 667
            KDSYPLP ID +VD  AGH+++SF+DAYSGYNQI+M+  D E T+F +      Y++MPF
Sbjct: 967  KDSYPLPTIDRLVDGAAGHQILSFLDAYSGYNQIQMYHRDREKTAFRTDSDNFFYEVMPF 1026

Query: 668  GLKNAGATYQRLVNKMFEKMIGHTMEVYVDDMLVKSLYMSDHLNDLNKMFAVLREYK 838
            GLKNAGATYQRL++ +F  MIG  +EVYVDD++VKS     H++DL ++F  LR+Y+
Sbjct: 1027 GLKNAGATYQRLMDHVFHDMIGRNVEVYVDDIVVKSDSCEQHVSDLKEVFQALRQYR 1083


>ref|XP_004292410.1| PREDICTED: uncharacterized protein LOC101297116 [Fragaria vesca
           subsp. vesca]
          Length = 727

 Score =  261 bits (667), Expect = 2e-67
 Identities = 122/250 (48%), Positives = 179/250 (71%), Gaps = 2/250 (0%)
 Frame = +2

Query: 11  PAAEDELPLQIKEGQSKKRK--RAEPVEQVDTINVGRPSEGRQLRIGHDLPEPYRSELVE 184
           P+   + P    EG+ KK++  R  P E+ + ++    +  R++RIG++L    R +L+ 
Sbjct: 6   PSEPIDDPRDNPEGKEKKKQVSRPNPAEETEWVSQSTNAPERKVRIGNNLDPELRQKLIT 65

Query: 185 FLGNNLDVFAWTHADMPGIDPKYACHRLNIDLTFRPVIQKRRKLGPDRQAALEIEVNKLL 364
           FL +   VFAW++ADMP I P    H+LNI   + PV QKRR   P++  A++ EV +L 
Sbjct: 66  FLQDKHAVFAWSYADMPSISPDIITHKLNILKDYPPVRQKRRAFNPEKYRAIQAEVQRLK 125

Query: 365 DNQFIREALYPRWVANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGH 544
           + +FIRE  YP WV+N V+V K NG+WR+CVD+T+LNKACP DS+PL  ID +V++TAG+
Sbjct: 126 EIKFIREVSYPTWVSNVVMVPKPNGKWRMCVDYTNLNKACPMDSFPLSRIDQLVNSTAGY 185

Query: 545 ELMSFMDAYSGYNQIRMHPEDEENTSFFSARGIHCYKMMPFGLKNAGATYQRLVNKMFEK 724
           ++++F+DAYSGYNQI+MHP ++E+T+F + +G++CY +MPFGLKNAGATYQRLVN MFE+
Sbjct: 186 KMLNFLDAYSGYNQIKMHPTNQEHTTFVTDKGLYCYGVMPFGLKNAGATYQRLVNAMFEE 245

Query: 725 MIGHTMEVYV 754
            IG  ME ++
Sbjct: 246 EIGELMEGFM 255


>gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1889

 Score =  261 bits (666), Expect = 3e-67
 Identities = 126/263 (47%), Positives = 177/263 (67%)
 Frame = +2

Query: 44   KEGQSKKRKRAEPVEQVDTINVGRPSEGRQLRIGHDLPEPYRSELVEFLGNNLDVFAWTH 223
            K+G+  K ++  P  +   + +     G+ + IG +L +    E+++ +  N+ VFAW+ 
Sbjct: 905  KQGEYIKIQKPIPEGKTKKVQLDEHDPGKFILIGENLEKHIEEEILKVVKENMAVFAWSP 964

Query: 224  ADMPGIDPKYACHRLNIDLTFRPVIQKRRKLGPDRQAALEIEVNKLLDNQFIREALYPRW 403
             ++ G+D     H L I   ++P  QK R++  DRQ A +IE+ KLL  + IRE ++P W
Sbjct: 965  DELQGVDRSLIEHNLAIKSGYKPKKQKLRRMSTDRQQAAKIELEKLLKAKVIREVMHPEW 1024

Query: 404  VANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELMSFMDAYSGYN 583
            +ANPVLVKK+NG+WR+C+DFTDLNKACPKD +PLP ID +VDATAG ELMSF+DAYSGY+
Sbjct: 1025 LANPVLVKKANGKWRMCIDFTDLNKACPKDDFPLPRIDQLVDATAGCELMSFLDAYSGYH 1084

Query: 584  QIRMHPEDEENTSFFSARGIHCYKMMPFGLKNAGATYQRLVNKMFEKMIGHTMEVYVDDM 763
            Q+ M  EDEE TSF +  G +C+  MPFGLKNAGAT+ RL+ K+  K +G  +E YVDD+
Sbjct: 1085 QVFMVKEDEEKTSFITPFGSYCFIRMPFGLKNAGATFARLIGKVLAKQLGRNVEAYVDDI 1144

Query: 764  LVKSLYMSDHLNDLNKMFAVLRE 832
            +VKS     H  DL +MF  LR+
Sbjct: 1145 VVKSKQAFTHGKDLQEMFENLRK 1167


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score =  259 bits (661), Expect = 1e-66
 Identities = 125/263 (47%), Positives = 176/263 (66%)
 Frame = +2

Query: 44   KEGQSKKRKRAEPVEQVDTINVGRPSEGRQLRIGHDLPEPYRSELVEFLGNNLDVFAWTH 223
            K+G+  K ++  P  +   + +     G+ + IG +L +    E+++ +  N+ VFAW+ 
Sbjct: 905  KQGEYIKIQKPIPEGKTKKVQLDEHDPGKFILIGENLEKHIEEEILKVVKENMAVFAWSP 964

Query: 224  ADMPGIDPKYACHRLNIDLTFRPVIQKRRKLGPDRQAALEIEVNKLLDNQFIREALYPRW 403
             ++ G+D     H L I   ++P  QK R++  DRQ A +IE+ KLL  + IRE ++P W
Sbjct: 965  DELQGVDRSLIEHNLAIKSGYKPKKQKLRRMSTDRQQAAKIELEKLLKAKVIREVMHPEW 1024

Query: 404  VANPVLVKKSNGQWRLCVDFTDLNKACPKDSYPLPNIDYMVDATAGHELMSFMDAYSGYN 583
            +ANPVLVKK+NG+WR+C+DFTDLNKACPKD +PLP ID +VDATAG ELMSF+DAYSGY+
Sbjct: 1025 LANPVLVKKANGKWRMCIDFTDLNKACPKDDFPLPRIDQLVDATAGCELMSFLDAYSGYH 1084

Query: 584  QIRMHPEDEENTSFFSARGIHCYKMMPFGLKNAGATYQRLVNKMFEKMIGHTMEVYVDDM 763
            Q+ M  EDEE TSF +  G +C+  MPFGLKNAGAT+ RL+ K+  K +G  +E YVDD+
Sbjct: 1085 QVFMVKEDEEKTSFITPFGTYCFIRMPFGLKNAGATFARLIGKVLAKQLGRNVEAYVDDI 1144

Query: 764  LVKSLYMSDHLNDLNKMFAVLRE 832
            +VKS     H  DL + F  LR+
Sbjct: 1145 VVKSKQAFTHGKDLQETFENLRK 1167