BLASTX nr result

ID: Rehmannia25_contig00021139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00021139
         (474 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB54149.1| Proliferating cell nuclear antigen large form [Mo...    64   2e-08
sp|Q00265.1|PCNA2_DAUCA RecName: Full=Proliferating cell nuclear...    64   3e-08
emb|CAB56779.1| proliferating cell-nuclear antigen [Daucus carota]     64   3e-08

>gb|EXB54149.1| Proliferating cell nuclear antigen large form [Morus notabilis]
          Length = 335

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 49/122 (40%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
 Frame = -1

Query: 474 VVEYKIAEVGYLRFYLAPKIXXXXENAAAQLETXXXXXXXXXXXXXXXPILVEESELVEE 295
           VVEYK+AE+G++RFYLAPKI    E   AQ ET                    + E   +
Sbjct: 236 VVEYKVAEMGHIRFYLAPKI-EEEEEIEAQRETR------------------PQVETKPK 276

Query: 294 TKPKLE---PV--LVEESEFVDERKPKVEIKPESKSNGEADVSVETKPESETNGEAEVMD 130
           TKPK E   P+  +  + E V + KPK+EIK   K   E + S E+KP+ +   E EVMD
Sbjct: 277 TKPKTEIEPPIDDIKPKVEHVSDIKPKLEIK---KPKEEIEASGESKPQVDAKAEIEVMD 333

Query: 129 VE 124
           VE
Sbjct: 334 VE 335


>sp|Q00265.1|PCNA2_DAUCA RecName: Full=Proliferating cell nuclear antigen large form;
           Short=PCNA; AltName: Full=Cyclin
          Length = 365

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
 Frame = -1

Query: 474 VVEYKIAEVGYLRFYLAPKI--XXXXENAAAQLETXXXXXXXXXXXXXXXPILVEESELV 301
           VVEYKIAE+GY+R+YLAPKI       N A   +                    E +  V
Sbjct: 236 VVEYKIAEMGYIRYYLAPKIEEEDEAANYAQPAQNSAAAATSNNGTKKN-----EGNNKV 290

Query: 300 EETKPKLEPVLVEESEFVDERKPKVEIKPESKSNGEADVSV----------------ETK 169
           +  K  ++   V++SE   + +P+ + K ++++  + DV V                ETK
Sbjct: 291 DSKKRAIKSEFVDDSEAATDAQPQAKAKTKTEAGEDDDVEVMDTKPKNEPDDGDEVMETK 350

Query: 168 PESETNGEAEVMDVE 124
           P++E+NGE EVMD+E
Sbjct: 351 PKTESNGEVEVMDIE 365


>emb|CAB56779.1| proliferating cell-nuclear antigen [Daucus carota]
          Length = 367

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
 Frame = -1

Query: 474 VVEYKIAEVGYLRFYLAPKI--XXXXENAAAQLETXXXXXXXXXXXXXXXPILVEESELV 301
           VVEYKIAE+GY+R+YLAPKI       N A   +                    E +  V
Sbjct: 238 VVEYKIAEMGYIRYYLAPKIEEEDEAANYAQPAQNSAAAATSNNGTKKN-----EGNNKV 292

Query: 300 EETKPKLEPVLVEESEFVDERKPKVEIKPESKSNGEADVSV----------------ETK 169
           +  K  ++   V++SE   + +P+ + K ++++  + DV V                ETK
Sbjct: 293 DSKKRAIKSEFVDDSEAATDAQPQAKAKTKTEAGEDDDVEVMDTKPKNEPDDGDEVMETK 352

Query: 168 PESETNGEAEVMDVE 124
           P++E+NGE EVMD+E
Sbjct: 353 PKTESNGEVEVMDIE 367


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