BLASTX nr result
ID: Rehmannia25_contig00021090
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00021090
(413 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB61594.1| poly(A)-binding protein, partial [Mesembryanthemu... 59 9e-07
gb|EMJ02396.1| hypothetical protein PRUPE_ppa002607mg [Prunus pe... 57 2e-06
ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-l... 57 3e-06
gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus] 57 3e-06
gb|EXC17307.1| Polyadenylate-binding protein 2 [Morus notabilis] 57 3e-06
gb|AFP74112.1| poly-A binding protein, partial [Nicotiana bentha... 56 4e-06
gb|ESW25573.1| hypothetical protein PHAVU_003G0475001g, partial ... 56 6e-06
gb|EOX91498.1| Poly(A) binding protein 8 [Theobroma cacao] 56 6e-06
gb|EMT03423.1| Polyadenylate-binding protein 2 [Aegilops tauschii] 56 6e-06
gb|EMS47633.1| Polyadenylate-binding protein 2 [Triticum urartu] 56 6e-06
gb|AGF69179.1| polyadenylate-binding protein 2-like protein, par... 56 6e-06
dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare] 56 6e-06
ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata s... 56 6e-06
ref|XP_002863435.1| predicted protein [Arabidopsis lyrata subsp.... 56 6e-06
ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [S... 56 6e-06
ref|XP_002313862.1| polyadenylate-binding family protein [Populu... 56 6e-06
ref|XP_002300227.1| polyadenylate-binding family protein [Populu... 56 6e-06
gb|ABK94932.1| unknown [Populus trichocarpa] 56 6e-06
ref|XP_006574897.1| PREDICTED: polyadenylate-binding protein 8-l... 55 7e-06
ref|XP_006422975.1| hypothetical protein CICLE_v10027999mg [Citr... 55 7e-06
>gb|AAB61594.1| poly(A)-binding protein, partial [Mesembryanthemum crystallinum]
Length = 176
Score = 58.5 bits (140), Expect = 9e-07
Identities = 34/70 (48%), Positives = 40/70 (57%)
Frame = +3
Query: 204 DTGPDAARPQSPNTPPRDLASQFAHMTPGEQPLFLAELTPEERRRVLGENLYPLVEELEP 383
D G R SP P LA+ LA TPE++R +LGENLYPLVE+LEP
Sbjct: 59 DMGGMPIRDLSPTVPVGTLAT------------LLANATPEQQRLLLGENLYPLVEQLEP 106
Query: 384 EKVSKVTGML 413
E +KVTGML
Sbjct: 107 EMAAKVTGML 116
>gb|EMJ02396.1| hypothetical protein PRUPE_ppa002607mg [Prunus persica]
Length = 653
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +3
Query: 306 LAELTPEERRRVLGENLYPLVEELEPEKVSKVTGML 413
LA TPE++R +LGENLYPLVE+LEPE +KVTGML
Sbjct: 562 LANATPEQQRTMLGENLYPLVEQLEPENAAKVTGML 597
>ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED:
polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = +3
Query: 246 PPRDLASQFAHMTP---GEQPLFLAELTPEERRRVLGENLYPLVEELEPEKVSKVTGML 413
PPRD H P G LA TP+++R +LGENLYPLVE+LEP+ +KVTGML
Sbjct: 541 PPRDAV----HPQPVPVGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGML 595
>gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Frame = +3
Query: 246 PPRDLASQFAHMTP---GEQPLFLAELTPEERRRVLGENLYPLVEELEPEKVSKVTGML 413
PPRD H P G LA TP+++R +LGENLYPLVE+LEP+ +KVTGML
Sbjct: 541 PPRDAV----HPQPVPVGALASALANATPDQQRTMLGENLYPLVEQLEPDNAAKVTGML 595
>gb|EXC17307.1| Polyadenylate-binding protein 2 [Morus notabilis]
Length = 651
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = +3
Query: 288 GEQPLFLAELTPEERRRVLGENLYPLVEELEPEKVSKVTGML 413
G LA TPE++R +LGENLYPLVE+LEP+ +KVTGML
Sbjct: 554 GAMATALANATPEQQRTMLGENLYPLVEQLEPDNAAKVTGML 595
>gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +3
Query: 249 PRDLASQFAHMTP-GEQPLFLAELTPEERRRVLGENLYPLVEELEPEKVSKVTGML 413
P D+ + P G LA +P E+R +LGENLYPLVE+LEPE +KVTGML
Sbjct: 533 PYDIGGRIVQPIPVGALATALANASPTEQRTMLGENLYPLVEQLEPETAAKVTGML 588
>gb|ESW25573.1| hypothetical protein PHAVU_003G0475001g, partial [Phaseolus
vulgaris]
Length = 561
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +3
Query: 246 PPRDLASQFAHMTPGEQPLFLAELTPEERRRVLGENLYPLVEELEPEKVSKVTGML 413
P RD AS + G LA +PE++R +LGENLYPLVE+LEP+ +KVTGML
Sbjct: 453 PLRD-ASHSQQIPIGALASALANASPEQQRTMLGENLYPLVEQLEPDNAAKVTGML 507
>gb|EOX91498.1| Poly(A) binding protein 8 [Theobroma cacao]
Length = 659
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 279 MTPGEQPLFLAELTPEERRRVLGENLYPLVEELEPEKVSKVTGML 413
MT G LA TPE++R +LGENLYPLV++LE E +KVTGML
Sbjct: 559 MTTGALATALANATPEQQRTLLGENLYPLVDQLEHENAAKVTGML 603
>gb|EMT03423.1| Polyadenylate-binding protein 2 [Aegilops tauschii]
Length = 566
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/79 (43%), Positives = 44/79 (55%)
Frame = +3
Query: 177 YDIGMFEMNDTGPDAARPQSPNTPPRDLASQFAHMTPGEQPLFLAELTPEERRRVLGENL 356
YD+G F + D G SP P L S LA TPE++R +LGE+L
Sbjct: 450 YDMGSFPVRDAGV------SPAPPIGTLTSA------------LANATPEQQRTILGESL 491
Query: 357 YPLVEELEPEKVSKVTGML 413
YPLVE+LE ++ +KVTGML
Sbjct: 492 YPLVEKLEHQQAAKVTGML 510
>gb|EMS47633.1| Polyadenylate-binding protein 2 [Triticum urartu]
Length = 567
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/79 (43%), Positives = 44/79 (55%)
Frame = +3
Query: 177 YDIGMFEMNDTGPDAARPQSPNTPPRDLASQFAHMTPGEQPLFLAELTPEERRRVLGENL 356
YD+G F + D G SP P L S LA TPE++R +LGE+L
Sbjct: 451 YDMGSFPVRDAGV------SPAPPIGTLTSA------------LANATPEQQRTILGESL 492
Query: 357 YPLVEELEPEKVSKVTGML 413
YPLVE+LE ++ +KVTGML
Sbjct: 493 YPLVEKLEHQQAAKVTGML 511
>gb|AGF69179.1| polyadenylate-binding protein 2-like protein, partial [Triticum
aestivum]
Length = 497
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/79 (43%), Positives = 44/79 (55%)
Frame = +3
Query: 177 YDIGMFEMNDTGPDAARPQSPNTPPRDLASQFAHMTPGEQPLFLAELTPEERRRVLGENL 356
YD+G F + D G SP P L S LA TPE++R +LGE+L
Sbjct: 431 YDMGSFPVRDAGV------SPAPPIGTLTSA------------LANATPEQQRTILGESL 472
Query: 357 YPLVEELEPEKVSKVTGML 413
YPLVE+LE ++ +KVTGML
Sbjct: 473 YPLVEKLEHQQAAKVTGML 491
>dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/79 (43%), Positives = 44/79 (55%)
Frame = +3
Query: 177 YDIGMFEMNDTGPDAARPQSPNTPPRDLASQFAHMTPGEQPLFLAELTPEERRRVLGENL 356
YD+G F + D G SP P L S LA TPE++R +LGE+L
Sbjct: 630 YDMGSFPVRDAGV------SPAPPIGTLTSA------------LANATPEQQRTILGESL 671
Query: 357 YPLVEELEPEKVSKVTGML 413
YPLVE+LE ++ +KVTGML
Sbjct: 672 YPLVEKLEHQQAAKVTGML 690
>ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
gi|297337373|gb|EFH67790.1| PAB8 binding protein 8
[Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 55.8 bits (133), Expect = 6e-06
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = +3
Query: 228 PQSPNTPPRDLASQFAHMTPGEQPLFLAELTPEERRRVLGENLYPLVEELEPEKVSKVTG 407
P S + P LA+Q LA PE++R +LGENLYPLVE+LEPE +KVTG
Sbjct: 565 PASQSVPIGALATQ------------LANAAPEQQRTMLGENLYPLVEQLEPESAAKVTG 612
Query: 408 ML 413
ML
Sbjct: 613 ML 614
>ref|XP_002863435.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309270|gb|EFH39694.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 341
Score = 55.8 bits (133), Expect = 6e-06
Identities = 31/62 (50%), Positives = 38/62 (61%)
Frame = +3
Query: 228 PQSPNTPPRDLASQFAHMTPGEQPLFLAELTPEERRRVLGENLYPLVEELEPEKVSKVTG 407
P S + P LA+Q LA PE++R +LGENLYPLVE+LEPE +KVTG
Sbjct: 249 PASQSVPIGALATQ------------LANAAPEQQRTMLGENLYPLVEQLEPESAAKVTG 296
Query: 408 ML 413
ML
Sbjct: 297 ML 298
>ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein
SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/82 (41%), Positives = 45/82 (54%)
Frame = +3
Query: 168 LNLYDIGMFEMNDTGPDAARPQSPNTPPRDLASQFAHMTPGEQPLFLAELTPEERRRVLG 347
+ YD+G F + D A P A+Q +T LA PE++R +LG
Sbjct: 545 IQAYDMGGFPVRDA---AVSP----------AAQIGTLTSA-----LANANPEQQRTILG 586
Query: 348 ENLYPLVEELEPEKVSKVTGML 413
ENLYPLVE+LEP + +KVTGML
Sbjct: 587 ENLYPLVEQLEPNQAAKVTGML 608
>ref|XP_002313862.1| polyadenylate-binding family protein [Populus trichocarpa]
gi|222850270|gb|EEE87817.1| polyadenylate-binding family
protein [Populus trichocarpa]
Length = 642
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +3
Query: 306 LAELTPEERRRVLGENLYPLVEELEPEKVSKVTGML 413
LA TP+++R +LGENLYPLVE+LEPE +KVTGML
Sbjct: 553 LANATPDQQRTMLGENLYPLVEQLEPEAAAKVTGML 588
>ref|XP_002300227.1| polyadenylate-binding family protein [Populus trichocarpa]
gi|222847485|gb|EEE85032.1| polyadenylate-binding family
protein [Populus trichocarpa]
Length = 644
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +3
Query: 306 LAELTPEERRRVLGENLYPLVEELEPEKVSKVTGML 413
LA TP+++R +LGENLYPLVE+LEPE +KVTGML
Sbjct: 555 LANATPDQQRTMLGENLYPLVEQLEPEAAAKVTGML 590
>gb|ABK94932.1| unknown [Populus trichocarpa]
Length = 408
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +3
Query: 306 LAELTPEERRRVLGENLYPLVEELEPEKVSKVTGML 413
LA TP+++R +LGENLYPLVE+LEPE +KVTGML
Sbjct: 319 LANATPDQQRTMLGENLYPLVEQLEPEAAAKVTGML 354
>ref|XP_006574897.1| PREDICTED: polyadenylate-binding protein 8-like [Glycine max]
Length = 648
Score = 55.5 bits (132), Expect = 7e-06
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +3
Query: 246 PPRDLASQFAHMTPGEQPLFLAELTPEERRRVLGENLYPLVEELEPEKVSKVTGML 413
P RD AS + G LA +PE++R +LGENLYPLVE+LEP+ +KVTGML
Sbjct: 539 PLRD-ASISQQIPVGALATALANASPEQQRTMLGENLYPLVEQLEPDNAAKVTGML 593
>ref|XP_006422975.1| hypothetical protein CICLE_v10027999mg [Citrus clementina]
gi|568867419|ref|XP_006487035.1| PREDICTED:
polyadenylate-binding protein 2-like [Citrus sinensis]
gi|557524909|gb|ESR36215.1| hypothetical protein
CICLE_v10027999mg [Citrus clementina]
Length = 645
Score = 55.5 bits (132), Expect = 7e-06
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 7/63 (11%)
Frame = +3
Query: 246 PPRDLASQFAHMTPGEQPL-------FLAELTPEERRRVLGENLYPLVEELEPEKVSKVT 404
P D+A+ P QP+ LA +PE++R +LGENLYPLVE+LEP+ +KVT
Sbjct: 527 PYGDMAAMPLRDAPISQPVPIGALASALANASPEQQRTMLGENLYPLVEQLEPDAAAKVT 586
Query: 405 GML 413
GML
Sbjct: 587 GML 589