BLASTX nr result

ID: Rehmannia25_contig00020886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00020886
         (454 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS57640.1| hypothetical protein M569_17176, partial [Genlise...    79   6e-13
ref|XP_006359690.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09

>gb|EPS57640.1| hypothetical protein M569_17176, partial [Genlisea aurea]
          Length = 731

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 44/120 (36%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
 Frame = +3

Query: 96  YLPYLTPPIIHSVLSSSALHRHPSTLLSFLNWAHSHSAV-KXXXXXXXXXXXXXXXXXXX 272
           YLP++TP  +HSVLSS +L   PS+LLSFLNWA S S+  K                   
Sbjct: 25  YLPHITPSTVHSVLSSPSLRHRPSSLLSFLNWAQSQSSCSKQINPLPLPAFLNLVTSLFS 84

Query: 273 HHKFNDAKSILQSQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTCIFAYCRSGWPHLAA 452
           HHKF DA+ ++ SQI                            + CI +YCRSGWP   A
Sbjct: 85  HHKFVDAQRVIDSQIISEHPHHHLHRHLLRPAPPLPPPSKLLLDICISSYCRSGWPQFGA 144


>ref|XP_006359690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Solanum tuberosum]
          Length = 770

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 40/118 (33%), Positives = 49/118 (41%)
 Frame = +3

Query: 96  YLPYLTPPIIHSVLSSSALHRHPSTLLSFLNWAHSHSAVKXXXXXXXXXXXXXXXXXXXH 275
           YLP+LTPPIIHS+LSS  L   PSTL SF  W+ SH                       H
Sbjct: 36  YLPHLTPPIIHSILSSPTLSSRPSTLFSFFQWSQSHIPSFSTHPLPFPSLLPLLSSLLSH 95

Query: 276 HKFNDAKSILQSQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTCIFAYCRSGWPHLA 449
            +F  A+S+L + I                            +T I AYC+ G PHLA
Sbjct: 96  RRFTVARSLLLTFIPSDHPQHLLHRHLLHPISNFPQPSTELLDTAIGAYCQCGKPHLA 153


Top