BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00020585
         (744 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354580.1| PREDICTED: DNA-directed RNA polymerases II, ...   157   3e-36
ref|XP_004229520.1| PREDICTED: probable DNA-directed RNA polymer...   155   2e-35
gb|EMJ09140.1| hypothetical protein PRUPE_ppa017455mg, partial [...   153   7e-35
gb|EXB80870.1| DNA-directed RNA polymerases I, II, and III subun...   149   1e-33
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ...   145   1e-32
ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group] g...   142   9e-32
gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indi...   142   9e-32
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I...   141   3e-31
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ...   140   3e-31
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   140   6e-31
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...   140   6e-31
ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, I...   137   3e-30
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I...   136   6e-30
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ...   136   8e-30
ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymer...   135   1e-29
gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subun...   135   2e-29
gb|EXB86762.1| DNA-directed RNA polymerases I, II, and III subun...   134   3e-29
ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, I...   134   3e-29
ref|XP_002438937.1| hypothetical protein SORBIDRAFT_10g028590 [S...   133   5e-29
ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutr...   133   7e-29

>ref|XP_006354580.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like isoform X1 [Solanum tuberosum]
           gi|565376162|ref|XP_006354581.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X2
           [Solanum tuberosum]
          Length = 144

 Score =  157 bits (397), Expect = 3e-36
 Identities = 89/150 (59%), Positives = 110/150 (73%), Gaps = 1/150 (0%)
 Frame = -2

Query: 701 MAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 525
           M  FHFDEIIKV+K D +   YDKVSR+ A+  D    ++LD+++ELYPM   E +RM+I
Sbjct: 1   MDAFHFDEIIKVVKVDADGKKYDKVSRIEAESSDGASSIQLDINSELYPMKRKELYRMVI 60

Query: 524 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 345
           STTL M+GSAV  Y PEGK  SL DKFEY++HGL+YK++           D KVVVY+SF
Sbjct: 61  STTL-MEGSAVTSYPPEGK--SLLDKFEYIVHGLVYKVS-----MEGSGADKKVVVYVSF 112

Query: 344 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 255
           GGLQLMLK D LK+ KFK+DQKLFLLLRK+
Sbjct: 113 GGLQLMLKSDALKVQKFKLDQKLFLLLRKM 142


>ref|XP_004229520.1| PREDICTED: probable DNA-directed RNA polymerases I, II, and III
           subunit RPABC3-like [Solanum lycopersicum]
          Length = 144

 Score =  155 bits (391), Expect = 2e-35
 Identities = 88/150 (58%), Positives = 109/150 (72%), Gaps = 1/150 (0%)
 Frame = -2

Query: 701 MAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 525
           M  FHFDEIIKV+K D +   Y+KVSR+ A+  D    ++LD+++ELYPM   E +RM+I
Sbjct: 1   MDAFHFDEIIKVVKVDADGKKYEKVSRIEAESSDGATSIQLDINSELYPMKRKELYRMVI 60

Query: 524 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 345
           STTL M+GSAV  Y PEGK  SL DKFEY++HGL+YK++           D KVVVY+SF
Sbjct: 61  STTL-MEGSAVTSYPPEGK--SLLDKFEYIVHGLVYKVS-----MEGSGADKKVVVYVSF 112

Query: 344 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 255
           GGLQLMLK D LK  KFK+DQKLFLLLRK+
Sbjct: 113 GGLQLMLKSDALKTQKFKLDQKLFLLLRKM 142


>gb|EMJ09140.1| hypothetical protein PRUPE_ppa017455mg, partial [Prunus persica]
          Length = 170

 Score =  153 bits (386), Expect = 7e-35
 Identities = 84/168 (50%), Positives = 110/168 (65%), Gaps = 8/168 (4%)
 Frame = -2

Query: 734 ALATSNPSLTRMAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYP 558
           A A  +    RM +F FD+I  + K D +   +DKVSR++A+ E     L LDV+TE+YP
Sbjct: 2   AFAVEDKLSVRMVDFLFDDIFTLEKVDPDGKKFDKVSRIVAQSEKRGVSLTLDVNTEIYP 61

Query: 557 MLPGENFRMLISTTLNMDGSAVAG-------YFPEGKQKSLADKFEYVMHGLLYKMAEAK 399
           M   + F M++S TLN  G+ VAG       Y  E +QKSLADKF+Y+MHGLLYKM+  K
Sbjct: 62  MHEKDKFLMVLSPTLNWSGAPVAGKQGQVLYYTFEVEQKSLADKFDYIMHGLLYKMSTEK 121

Query: 398 EKTHDGHDDVKVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 255
            K+    + VKV VY SFGGLQ+MLKGDP    KFK+DQ +FLL+RK+
Sbjct: 122 GKSEYSKEGVKVEVYASFGGLQMMLKGDPTNCTKFKIDQNMFLLIRKL 169


>gb|EXB80870.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3 [Morus
           notabilis]
          Length = 152

 Score =  149 bits (376), Expect = 1e-33
 Identities = 76/156 (48%), Positives = 107/156 (68%), Gaps = 1/156 (0%)
 Frame = -2

Query: 701 MAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 525
           M +F FD+I  V + + N+  +DKV+R+ A  E     + LDV+TE+YPM  G+ F M++
Sbjct: 1   MVDFLFDDIFSVEELNPNKEKFDKVTRIKAHSEKHGMLMHLDVNTEIYPMKEGDRFVMVL 60

Query: 524 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 345
           S TLN +G  VA Y  + +QKSLADKFEY+MHGLLYK+ E          D KV +Y+SF
Sbjct: 61  SPTLNWNGVPVADYHKQAEQKSLADKFEYIMHGLLYKLTE-----EGSGSDFKVGIYVSF 115

Query: 344 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI*HEYLS 237
           GGLQ+ML GDP +  KFK DQK+FLL+RK+ +++++
Sbjct: 116 GGLQMMLNGDPAQCTKFKHDQKMFLLIRKVSNDFVT 151


>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Oryza brachyantha]
          Length = 147

 Score =  145 bits (367), Expect = 1e-32
 Identities = 73/150 (48%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
 Frame = -2

Query: 701 MAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 525
           MAEF F++I  V + D +   +D+VSR+ A+ E  + Y++LDV T++YPM PG+ F M++
Sbjct: 1   MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARNEQLNVYMQLDVATDVYPMHPGDKFTMVL 60

Query: 524 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 345
             TLN+DG+   G+F +  +K+LADK+EYVMHG LYK++E KE +     + KV +Y SF
Sbjct: 61  VPTLNLDGTPDTGFFTQAGRKTLADKYEYVMHGKLYKISEDKETS---GQNAKVEMYASF 117

Query: 344 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 255
           GGL +MLKGDP     F++DQ+LFLL+RK+
Sbjct: 118 GGLLMMLKGDPSSAANFELDQRLFLLMRKV 147


>ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group]
           gi|29244685|gb|AAO73277.1| putative RNA polymerase
           [Oryza sativa Japonica Group] gi|41469638|gb|AAS07361.1|
           putative RNA polymerase [Oryza sativa Japonica Group]
           gi|108712076|gb|ABF99871.1| RNA polymerase Rpb8 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|108712077|gb|ABF99872.1| RNA polymerase Rpb8 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113550351|dbj|BAF13794.1| Os03g0845700 [Oryza sativa
           Japonica Group] gi|125588624|gb|EAZ29288.1| hypothetical
           protein OsJ_13351 [Oryza sativa Japonica Group]
           gi|215692970|dbj|BAG88390.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 148

 Score =  142 bits (359), Expect = 9e-32
 Identities = 71/150 (47%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
 Frame = -2

Query: 701 MAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 525
           MAEF F++I  V + D +   +D+VSR+ A+ +  D Y++LDV T++YPM PG+ F M++
Sbjct: 1   MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 60

Query: 524 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 345
             TLN+DG+  + +F +  +K+LADK+EYVMHG LYK++E K+ +    +  KV +Y SF
Sbjct: 61  VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTS--DQNAKKVEMYASF 118

Query: 344 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 255
           GGL +MLKGDP     F++DQ+LFLL+RK+
Sbjct: 119 GGLLVMLKGDPSSAANFELDQRLFLLMRKV 148


>gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indica Group]
          Length = 215

 Score =  142 bits (359), Expect = 9e-32
 Identities = 71/150 (47%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
 Frame = -2

Query: 701 MAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 525
           MAEF F++I  V + D +   +D+VSR+ A+ +  D Y++LDV T++YPM PG+ F M++
Sbjct: 68  MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 127

Query: 524 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 345
             TLN+DG+  + +F +  +K+LADK+EYVMHG LYK++E K+ +    +  KV +Y SF
Sbjct: 128 VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTS--DQNAKKVEMYASF 185

Query: 344 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 255
           GGL +MLKGDP     F++DQ+LFLL+RK+
Sbjct: 186 GGLLVMLKGDPSSAANFELDQRLFLLMRKV 215


>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3 isoform 1 [Vitis vinifera]
           gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3 isoform 2
           [Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
           protein product [Vitis vinifera]
          Length = 145

 Score =  141 bits (355), Expect = 3e-31
 Identities = 71/145 (48%), Positives = 102/145 (70%), Gaps = 1/145 (0%)
 Frame = -2

Query: 686 FDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLISTTLN 510
           F +I KV++ D +   +DKVSR+ A+ E  D Y++LDV+TE+YPM  GE F M +++TL+
Sbjct: 6   FGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSLASTLD 65

Query: 509 MDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQL 330
           +DG+   GY+ +  +KSLADKFEYVMHG LYK++E          +VK V+Y+SFGGL +
Sbjct: 66  LDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISE-----EGSGPNVKGVIYVSFGGLLM 120

Query: 329 MLKGDPLKMHKFKVDQKLFLLLRKI 255
           ML GDP    K  +DQ++FLL+RK+
Sbjct: 121 MLSGDPANTAKLDLDQRVFLLIRKV 145


>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like isoform X1 [Oryza brachyantha]
           gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X2
           [Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X3 [Oryza brachyantha]
           gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X4
           [Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X5 [Oryza brachyantha]
          Length = 146

 Score =  140 bits (354), Expect = 3e-31
 Identities = 70/150 (46%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
 Frame = -2

Query: 701 MAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 525
           M E  F++I  V + D +   +D+VSR+ A+ E  D Y++LDV TE+YPM PG+ F M++
Sbjct: 1   MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVL 60

Query: 524 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 345
           + TLN+DG+   G++ +  +K+LADK++YVMHG LYK++E       G    KV +Y SF
Sbjct: 61  APTLNLDGTPDIGFYTQAGRKTLADKYDYVMHGKLYKISE----DGSGGQATKVEIYASF 116

Query: 344 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 255
           GGL +MLKGDP     F++DQ+LFLL+RK+
Sbjct: 117 GGLLMMLKGDPSTAANFELDQRLFLLIRKV 146


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  140 bits (352), Expect = 6e-31
 Identities = 71/158 (44%), Positives = 104/158 (65%), Gaps = 1/158 (0%)
 Frame = -2

Query: 725 TSNPSLTRMAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLP 549
           T  P   +M E  F++I  V + D +   +D+VSR+ A+ E  D Y++LDV TE+YPM  
Sbjct: 243 TPPPPPRKMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRA 302

Query: 548 GENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDV 369
           G+ F M+++ TLN+DG+   G++ +  +K+LADKF+YVMHG LYK++E            
Sbjct: 303 GDRFTMVLAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISE----DSSSGQAT 358

Query: 368 KVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 255
           KV +Y SFGGL +MLKGDP     F++DQ+LFLL+RK+
Sbjct: 359 KVEIYASFGGLLMMLKGDPSSAASFELDQRLFLLIRKV 396


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score =  140 bits (352), Expect = 6e-31
 Identities = 71/158 (44%), Positives = 104/158 (65%), Gaps = 1/158 (0%)
 Frame = -2

Query: 725 TSNPSLTRMAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLP 549
           T  P   +M E  F++I  V + D +   +D+VSR+ A+ E  D Y++LDV TE+YPM  
Sbjct: 38  TPPPPPRKMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRA 97

Query: 548 GENFRMLISTTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDV 369
           G+ F M+++ TLN+DG+   G++ +  +K+LADKF+YVMHG LYK++E            
Sbjct: 98  GDRFTMVLAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISE----DSSSGQAT 153

Query: 368 KVVVYISFGGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 255
           KV +Y SFGGL +MLKGDP     F++DQ+LFLL+RK+
Sbjct: 154 KVEIYASFGGLLMMLKGDPSSAASFELDQRLFLLIRKV 191


>ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC3 [Vitis vinifera] gi|296084254|emb|CBI24642.3|
           unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  137 bits (346), Expect = 3e-30
 Identities = 70/150 (46%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
 Frame = -2

Query: 701 MAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 525
           M E  FD+I  V   D     +DKVSR+ A  E  D +++LDV+ E YP+  GE FRM++
Sbjct: 1   MVETFFDDIFVVDGQDPGGKKFDKVSRIEASSEQYDMFMQLDVNIEAYPIQAGEKFRMVL 60

Query: 524 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 345
           + TL++DG+ V  YF +G+QKSLADKF+YVM+G++YK++           DVK V+Y SF
Sbjct: 61  APTLHLDGADVTDYFTQGEQKSLADKFDYVMYGIIYKVS-----NEGSGPDVKGVIYASF 115

Query: 344 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 255
           GGL ++LKGDP  ++K +V+++LFLL++K+
Sbjct: 116 GGLLMILKGDPSNLNKLEVNKRLFLLMKKV 145


>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like isoform 1 [Solanum lycopersicum]
           gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3-like
           isoform 2 [Solanum lycopersicum]
          Length = 145

 Score =  136 bits (343), Expect = 6e-30
 Identities = 69/150 (46%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
 Frame = -2

Query: 701 MAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 525
           M E  F++I  V + D +   +D+V+R+ A+ E  D ++ LDV+TE+YPM   + F M++
Sbjct: 1   MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVL 60

Query: 524 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 345
           ++TLN+DG+   GYF +G +KSLADKFEYVMHG LY+++E     H     VK  +++SF
Sbjct: 61  ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKH-----VKADIFVSF 115

Query: 344 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 255
           GGL + L+GDP    KF++DQK+FLL+RK+
Sbjct: 116 GGLLMQLRGDPSIAAKFELDQKIFLLIRKV 145


>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Solanum tuberosum]
          Length = 145

 Score =  136 bits (342), Expect = 8e-30
 Identities = 68/150 (45%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
 Frame = -2

Query: 701 MAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 525
           M E  F++I  V + D +   +D+V+R+ A+ E  D ++ LD++TE+YPM   + F M++
Sbjct: 1   MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVL 60

Query: 524 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 345
           ++TLN+DG+   GYF +G +KSLADKFEYVMHG LY+++E     H     VK  +++SF
Sbjct: 61  ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKH-----VKADIFVSF 115

Query: 344 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 255
           GGL + L+GDP    KF++DQK+FLL+RK+
Sbjct: 116 GGLLMQLRGDPSIAAKFELDQKIFLLIRKV 145


>ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymerases I, II, and III
           subunit RPABC3-like [Cucumis sativus]
           gi|449509097|ref|XP_004163492.1| PREDICTED: probable
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC3-like [Cucumis sativus]
          Length = 146

 Score =  135 bits (341), Expect = 1e-29
 Identities = 74/150 (49%), Positives = 100/150 (66%), Gaps = 1/150 (0%)
 Frame = -2

Query: 701 MAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 525
           MA   F++I KV   + +   YDKVSR+ A+ E    ++ LDV+TE+YP+  GE   M++
Sbjct: 1   MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVL 60

Query: 524 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 345
           S TLN DGS V  Y  +  +KSLADKFEY+MHG  YK+++          D+KV VY SF
Sbjct: 61  SPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLSD-----EGSGSDLKVEVYASF 115

Query: 344 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 255
           GGLQ++LKGDP+   KF+VDQ +FLLLRK+
Sbjct: 116 GGLQMLLKGDPIHCAKFRVDQNMFLLLRKL 145


>gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3
           [Aegilops tauschii]
          Length = 220

 Score =  135 bits (339), Expect = 2e-29
 Identities = 66/150 (44%), Positives = 102/150 (68%), Gaps = 1/150 (0%)
 Frame = -2

Query: 701 MAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 525
           MAE  F++I  V + D +   +D+V+R+ A+ E  + Y++LD+ T++YPM  G+ F M++
Sbjct: 1   MAEHLFEDIFHVTRIDPDGKKFDRVNRIEARSEQLEMYMQLDIATDVYPMHMGDKFTMVL 60

Query: 524 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 345
           + TLN+DG+   GY+ +  +K+LADK++YVMHG LYK++E       G    KV +Y SF
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDNSSKDKG--PTKVEIYASF 118

Query: 344 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 255
           GGL ++LKGDP      ++DQKLFLL+RK+
Sbjct: 119 GGLLMLLKGDPSSAANLELDQKLFLLIRKV 148


>gb|EXB86762.1| DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Morus
           notabilis]
          Length = 187

 Score =  134 bits (337), Expect = 3e-29
 Identities = 71/150 (47%), Positives = 101/150 (67%), Gaps = 1/150 (0%)
 Frame = -2

Query: 701 MAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 525
           MAEF F++I K+ + + +   +DKV+R+ AK E  D ++ LDV T++YPM  GE F M +
Sbjct: 1   MAEFLFEDIFKIDRLNPDGKKFDKVTRIEAKSEKFDMFMHLDVGTDVYPMNEGEKFSMAL 60

Query: 524 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 345
           S+TLN DG+   GY+  G +K+LAD +EYVM G LY++AE       GH   K  +  SF
Sbjct: 61  SSTLNEDGTPDTGYYTPGNRKTLADNYEYVMQGKLYRIAEG-----SGHHG-KAEIDASF 114

Query: 344 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 255
           GGL +MLKGDP    K+++DQ+LFLL+RK+
Sbjct: 115 GGLLMMLKGDPSYFKKYELDQRLFLLIRKV 144


>ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Cucumis sativus]
           gi|449484745|ref|XP_004156968.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3-like
           [Cucumis sativus]
          Length = 144

 Score =  134 bits (337), Expect = 3e-29
 Identities = 68/150 (45%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
 Frame = -2

Query: 701 MAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 525
           M E  FD+I K+ + + +   +DKV+R+ AK E  D ++ LD+++E+YP+  GE F M +
Sbjct: 1   MVELLFDDIFKIERLNPDGKKFDKVTRIEAKSEKFDMFMHLDINSEIYPLKEGEKFSMAL 60

Query: 524 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 345
           + TLN+DG+   GYF +G +KSLAD++EYVM G L++++E+      GH   K  +  SF
Sbjct: 61  APTLNLDGTPDTGYFLQGNRKSLADRYEYVMQGKLFRISES-----SGHGG-KAEIDASF 114

Query: 344 GGLQLMLKGDPLKMHKFKVDQKLFLLLRKI 255
           GGL +MLKGDP    KF++DQ+LFLL+RK+
Sbjct: 115 GGLLMMLKGDPSHCSKFELDQRLFLLIRKV 144


>ref|XP_002438937.1| hypothetical protein SORBIDRAFT_10g028590 [Sorghum bicolor]
           gi|241917160|gb|EER90304.1| hypothetical protein
           SORBIDRAFT_10g028590 [Sorghum bicolor]
          Length = 149

 Score =  133 bits (335), Expect = 5e-29
 Identities = 67/149 (44%), Positives = 103/149 (69%), Gaps = 1/149 (0%)
 Frame = -2

Query: 701 MAEFHFDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLI 525
           MAE  F +  KV + D +   +DKV+R+ A  E++  Y++LDV TE+Y M  G+ F M++
Sbjct: 1   MAEHLFKDKFKVTRLDPDGKKFDKVTRIEATSENE-MYMQLDVATEVYAMKLGDTFNMVL 59

Query: 524 STTLNMDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISF 345
           + TLN+DGS  AGY+ +  +K+LAD ++Y+MHG LYK++E   K  +G+   KV +Y SF
Sbjct: 60  ALTLNLDGSTDAGYYTQAGRKTLADDYDYIMHGKLYKISEDSTKDSNGNSSTKVEIYASF 119

Query: 344 GGLQLMLKGDPLKMHKFKVDQKLFLLLRK 258
           GGL ++L+GDP     F++DQ+LFLL++K
Sbjct: 120 GGLLMILRGDPSCAAGFQLDQRLFLLIKK 148


>ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutrema salsugineum]
           gi|557098120|gb|ESQ38556.1| hypothetical protein
           EUTSA_v10029046mg [Eutrema salsugineum]
          Length = 146

 Score =  133 bits (334), Expect = 7e-29
 Identities = 67/145 (46%), Positives = 100/145 (68%), Gaps = 1/145 (0%)
 Frame = -2

Query: 686 FDEIIKVLKFD-NQVVYDKVSRVIAKGEDDDCYLELDVHTELYPMLPGENFRMLISTTLN 510
           F++I  V K D +   +DKV+RV A+  + + ++ LDV+TE+YPM  G+ F M ++ TLN
Sbjct: 8   FEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPMAVGDKFTMAMAPTLN 67

Query: 509 MDGSAVAGYFPEGKQKSLADKFEYVMHGLLYKMAEAKEKTHDGHDDVKVVVYISFGGLQL 330
           +DG+   GYF  G +K+LADK+EY+MHG LYK+ E   KT       K  +Y+SFGGL +
Sbjct: 68  LDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKITERDGKT------PKAELYVSFGGLLM 121

Query: 329 MLKGDPLKMHKFKVDQKLFLLLRKI 255
           +L+GDP  +  F++DQ+LFLL+RK+
Sbjct: 122 LLQGDPAHISHFELDQRLFLLMRKL 146