BLASTX nr result
ID: Rehmannia25_contig00020173
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00020173
(331 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ... 69 8e-10
emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera] 67 2e-09
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group] 65 7e-09
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group] 65 7e-09
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group] 65 9e-09
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 65 1e-08
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 64 2e-08
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc... 64 3e-08
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 63 4e-08
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 63 4e-08
emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera] 63 5e-08
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 62 6e-08
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera] 61 1e-07
gb|AAB82754.1| retrofit [Oryza longistaminata] 61 2e-07
gb|EEC80484.1| hypothetical protein OsI_22718 [Oryza sativa Indi... 61 2e-07
gb|EEC76476.1| hypothetical protein OsI_14211 [Oryza sativa Indi... 61 2e-07
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 61 2e-07
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 61 2e-07
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 60 2e-07
emb|CAN71996.1| hypothetical protein VITISV_023485 [Vitis vinifera] 60 4e-07
>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
Length = 646
Score = 68.6 bits (166), Expect = 8e-10
Identities = 45/111 (40%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPV-SISDSVVLNSM 178
DQ T ILLKG + GLYS P+A + + Q VF + S S S ++SM
Sbjct: 461 DQKTQAILLKGGLDKGLYSV------------PSAYSSHAPQARVFQIFSTSSSTSIDSM 508
Query: 179 KTPSLATWHSRLGHASIDIVKKALQQCNLPYSDNFNENACSSCLQSKSHKL 331
+ WH+RLGH S+ IV K L NLP N+ C SC +KSHKL
Sbjct: 509 RL-----WHNRLGHPSLAIVNKVLNHYNLPVFSLQNKLLCDSCQLAKSHKL 554
>emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera]
Length = 1083
Score = 67.4 bits (163), Expect = 2e-09
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
D T +L +G+++NGLY F P NN + F ++ S F S + S+ N +K
Sbjct: 334 DLHTKKVLAQGKLENGLYRF---PVLNNKKVA----FVGATNSSTF-YSHNSSIFDNKVK 385
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYSDNFN---ENACSSCLQSKSHKL 331
WH RLGHAS DIV + +Q CN+ + N N CSSC +KSH+L
Sbjct: 386 L-----WHYRLGHASTDIVTQIMQSCNVSFEKNKNXVCSTXCSSCQLAKSHRL 433
>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
Length = 1087
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/110 (32%), Positives = 55/110 (50%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
DQ T + LL+GR + GLY L T P ++++ S ++S
Sbjct: 404 DQTTKSTLLQGRSRGGLYPIPLKST------------TPQGRQALVSTSSAES------- 444
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYSDNFNENACSSCLQSKSHKL 331
WHSRLGH S +V + L++ N+P S++ E C +C Q+KSH+L
Sbjct: 445 -----RWHSRLGHPSFSVVSRVLRKHNIPVSESREERVCDACQQAKSHQL 489
>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
Length = 1131
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/110 (32%), Positives = 55/110 (50%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
DQ T + LL+GR + GLY L T P ++++ S ++S
Sbjct: 404 DQTTKSTLLQGRSRGGLYPIPLKST------------TPQGRQALVSTSSAES------- 444
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYSDNFNENACSSCLQSKSHKL 331
WHSRLGH S +V + L++ N+P S++ E C +C Q+KSH+L
Sbjct: 445 -----RWHSRLGHPSFSVVSRVLRKHNIPVSESREERVCDACQQAKSHQL 489
>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
Length = 1825
Score = 65.1 bits (157), Expect = 9e-09
Identities = 43/111 (38%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
DQAT +LKGR + GLY A+P PSS K V V
Sbjct: 545 DQATRRTVLKGRRQKGLYP-----------VPSASP--PSSAKVVCAV------------ 579
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYSDNFN-ENACSSCLQSKSHKL 331
TPS WHSRLGH+S I+ + + + LP D N E+ C +CL++KSH+L
Sbjct: 580 TPSFERWHSRLGHSSAPIISRVISKNKLPCLDESNKESVCDACLKAKSHQL 630
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 64.7 bits (156), Expect = 1e-08
Identities = 34/109 (31%), Positives = 57/109 (52%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
DQ T +L+ G++++GLY+F ++++ + + S SV S S V S+
Sbjct: 465 DQVTQAVLMVGKVRDGLYAF------DSSHLALRPTQSLSKSPSVVASSFSSKVCTTSLS 518
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYSDNFNENACSSCLQSKSHK 328
+ + WH RLGH S +K L +CN+ + + + N CSSC K H+
Sbjct: 519 S-TFDLWHKRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHR 566
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 63.9 bits (154), Expect = 2e-08
Identities = 38/109 (34%), Positives = 53/109 (48%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
D +T T+L+ G++K GLY F +NT P + SS + + + V S
Sbjct: 450 DPSTRTVLMHGQLKGGLYVF--------DNTQLKLPLHNSSCFASTALPSKEPTVPASPT 501
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYSDNFNENACSSCLQSKSHK 328
+P WH+RLGH S IV L +CNLP+ + CS C K HK
Sbjct: 502 SP-FTLWHNRLGHPSSHIVSLVLNKCNLPHLNKIPSLICSXCCMGKIHK 549
>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2074
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
DQ T +LL+G +NGLY P + S Q VL ++K
Sbjct: 1375 DQVTKNLLLRGPCRNGLYPL------------PTSSLATSKQ------------VLGAIK 1410
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYSDNFNEN-ACSSCLQSKSHKL 331
P+++ WHSRLGH S+ IV+K + NLP + NE+ C++C Q+KSH+L
Sbjct: 1411 -PTMSRWHSRLGHPSLAIVQKVVSSNNLPCLGDVNESGVCNACQQAKSHQL 1460
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 63.2 bits (152), Expect = 4e-08
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
DQ T +LL+G+ ++GLY S R+ N + L + K
Sbjct: 419 DQVTRDVLLEGKCRHGLYPIPKSFGRSTNKQA-----------------------LGAAK 455
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYS-DNFNENACSSCLQSKSHKL 331
SL+ WHSRLGH S+ IVK+ + + NLP S ++ N++ C++C ++KSH+L
Sbjct: 456 L-SLSRWHSRLGHPSLPIVKQVISRNNLPCSVESVNQSVCNACQEAKSHQL 505
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 63.2 bits (152), Expect = 4e-08
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
DQ T +LL+G+ ++GLY S R+ N + L + K
Sbjct: 419 DQVTRDVLLEGKCRHGLYPIPKSFGRSTNKQA-----------------------LGAAK 455
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYS-DNFNENACSSCLQSKSHKL 331
SL+ WHSRLGH S+ IVK+ + + NLP S ++ N++ C++C ++KSH+L
Sbjct: 456 L-SLSRWHSRLGHPSLPIVKQVISRNNLPCSVESVNQSVCNACQEAKSHQL 505
>emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]
Length = 1198
Score = 62.8 bits (151), Expect = 5e-08
Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
D T +L +G+++NGLY F P N+ + N S+ S + S+ N +K
Sbjct: 334 DLHTKKVLAQGKLENGLYRF---PVLNSKKVAFVGAINSSTF-----YSHNSSIFDNKVK 385
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYSDNFN-------ENACSSCLQSKSHKL 331
WH RLGHAS +IV + +Q CN+ + N N CSSC +KSH+L
Sbjct: 386 L-----WHHRLGHASTNIVTQIMQSCNVSFEKNKNTVCSTVCSTVCSSCQLAKSHRL 437
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 62.4 bits (150), Expect = 6e-08
Identities = 38/110 (34%), Positives = 55/110 (50%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
D T +L +G+++NGLY F P +N P++ + S F S +V +
Sbjct: 439 DLHTKMVLAQGKLENGLYKF---PVFSN-----LKPYSSINNASAFHSQFSSTVENKA-- 488
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYSDNFNENACSSCLQSKSHKL 331
WH+RLGHAS DIV K + CN+ S + CS C +KSH+L
Sbjct: 489 ----ELWHNRLGHASFDIVSKVMNTCNVA-SGKYKSFVCSDCQLAKSHRL 533
>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
Length = 920
Score = 61.2 bits (147), Expect = 1e-07
Identities = 35/110 (31%), Positives = 55/110 (50%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
D+ T +L +G+++NGLY F P +N P++ + S F S ++ +
Sbjct: 254 DRHTKMVLAQGKLENGLYKF---PVFSNKK-----PYSSVNNASAFHSHFSSTIENKA-- 303
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYSDNFNENACSSCLQSKSHKL 331
WH+RLGH + DIV K + CN+ S + CS C +KSH+L
Sbjct: 304 ----ELWHNRLGHVASDIVSKVMNTCNVA-SGKYKSTVCSDCQLAKSHRL 348
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 60.8 bits (146), Expect = 2e-07
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
DQ T +LL+G+ ++GLY R+ N + L + K
Sbjct: 415 DQVTRDVLLEGKCRHGLYPIPKFFGRSTNKQA-----------------------LGAAK 451
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYS-DNFNENACSSCLQSKSHKL 331
SL+ WHSRLGH S+ IVK+ + + NLP S ++ N++ C++C ++KSH+L
Sbjct: 452 L-SLSRWHSRLGHPSLPIVKQVISRNNLPCSVESVNQSVCNACQEAKSHQL 501
>gb|EEC80484.1| hypothetical protein OsI_22718 [Oryza sativa Indica Group]
Length = 506
Score = 60.8 bits (146), Expect = 2e-07
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
D+AT +LKGR + LYS SP + +++
Sbjct: 404 DRATRNTILKGRCRRRLYSLPTSPAKQ----------------------------VHAAT 435
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYSDNFNENA-CSSCLQSKSHKL 331
TPS + WHSRLGH ++ IV + L + NLP S N+++ C +C + KSH+L
Sbjct: 436 TPSFSRWHSRLGHPAVPIVTRVLSKNNLPCSTVANKDSICDACQKGKSHQL 486
>gb|EEC76476.1| hypothetical protein OsI_14211 [Oryza sativa Indica Group]
Length = 178
Score = 60.8 bits (146), Expect = 2e-07
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
D+AT +LKGR + LYS SP + +++
Sbjct: 58 DRATRNTILKGRCRRRLYSLPTSPAKQ----------------------------VHAAT 89
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYSDNFNENA-CSSCLQSKSHKL 331
TPS + WHSRLGH ++ IV + L + NLP S N+++ C +C + KSH+L
Sbjct: 90 TPSFSRWHSRLGHPAVPIVTRVLSKNNLPCSTIANKDSICDACQKGKSHQL 140
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 60.8 bits (146), Expect = 2e-07
Identities = 42/110 (38%), Positives = 57/110 (51%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
DQ T ILL+G +++GLY F P R SPAA + S +S N
Sbjct: 472 DQVTKKILLQGSLEHGLYRF---PARFV--PSPAAFVSSSYDRSS-----------NLSL 515
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYSDNFNENACSSCLQSKSHKL 331
T + WHSRLGH + +I+K L CN+ + + N N C +C +KSHKL
Sbjct: 516 TTTTTLWHSRLGHPADNILKHILTSCNISHQCHKN-NVCCACQFAKSHKL 564
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 60.8 bits (146), Expect = 2e-07
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
D+AT +LKGR + LYS SP + +++
Sbjct: 382 DRATRNTILKGRCRRRLYSLPTSPAKQ----------------------------VHAAT 413
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYSDNFNENA-CSSCLQSKSHKL 331
TPS + WHSRLGH ++ IV + L + NLP S N+++ C +C + KSH+L
Sbjct: 414 TPSFSRWHSRLGHPAVPIVTRVLSKNNLPCSTVANKDSICDACQKGKSHQL 464
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 60.5 bits (145), Expect = 2e-07
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQKSVFPVSISDSVVLNSMK 181
DQ T ILL+GR ++GLY P TS A L + K
Sbjct: 416 DQVTKDILLEGRCRHGLYPI---PKSFGRTTSKQA--------------------LGTTK 452
Query: 182 TPSLATWHSRLGHASIDIVKKALQQCNLPYS-DNFNENACSSCLQSKSHKL 331
SL+ WHSRLGH S+ IVK+ + + NLP S ++ N++ C++C ++KS +L
Sbjct: 453 L-SLSRWHSRLGHPSLPIVKQVISKNNLPCSVESVNQSVCNACQEAKSRQL 502
>emb|CAN71996.1| hypothetical protein VITISV_023485 [Vitis vinifera]
Length = 1087
Score = 59.7 bits (143), Expect = 4e-07
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 DQATDTILLKGRMKNGLYSFHLSPTRNNNNTSPAAPFNPSSQ-KSVFPVSISDSVVLNSM 178
D+ T +L +G+++NGLY F + +N P + N +S S F ++ + L
Sbjct: 245 DRHTKMVLAQGKLENGLYKFPMF-----SNKKPYSSINNASAFHSHFXSTVENKAEL--- 296
Query: 179 KTPSLATWHSRLGHASIDIVKKALQQCNLPYSDNFNENACSSCLQSKSHKL 331
WH+RLGHA+ DIV K + CN+ S + C C +KSH+L
Sbjct: 297 -------WHNRLGHAASDIVSKVMNTCNVA-SRKYKSTVCFDCQLAKSHRL 339