BLASTX nr result

ID: Rehmannia25_contig00020140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00020140
         (416 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004231313.1| PREDICTED: eukaryotic translation initiation...    68   1e-09
ref|XP_006358488.1| PREDICTED: eukaryotic translation initiation...    68   1e-09
ref|XP_004231314.1| PREDICTED: eukaryotic translation initiation...    64   2e-08
emb|CBI29961.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_006350770.1| PREDICTED: eukaryotic translation initiation...    55   1e-05

>ref|XP_004231313.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Solanum lycopersicum]
          Length = 697

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 41/98 (41%), Positives = 51/98 (52%)
 Frame = +1

Query: 49  PLRRKDGQDYAATGGGRWQEXXXXXXXXXXXXXXXXXXXXXXXXAQFTRDRTGRSGGYHG 228
           P RR+DGQDYAA  GGRWQ+                         Q +RDRT ++ G  G
Sbjct: 606 PPRRRDGQDYAAAAGGRWQDFSFSQGRQGSSGGRTGYAGSRSTSGQTSRDRTNQARGTLG 665

Query: 229 SRHQDGPGRMHQTGSTVRGGQVDGYTRPMVNLNRGVRA 342
                G G  +Q+G+T RG Q+DG  R MVNLNRG R+
Sbjct: 666 -----GQGSRYQSGTTSRGSQMDGSGR-MVNLNRGGRS 697


>ref|XP_006358488.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Solanum tuberosum]
          Length = 922

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 43/100 (43%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
 Frame = +1

Query: 49   PLRRKDGQDYAAT--GGGRWQEXXXXXXXXXXXXXXXXXXXXXXXXAQFTRDRTGRSGGY 222
            P RR+DGQDYAA   GGGRWQ+                         Q +RDRT ++ G 
Sbjct: 829  PPRRRDGQDYAAAAAGGGRWQDFSFSQGRQGGSGGRTGYVGGRSTSGQTSRDRTNQARGT 888

Query: 223  HGSRHQDGPGRMHQTGSTVRGGQVDGYTRPMVNLNRGVRA 342
             G     G G  +Q+G+T RGGQ+DG  R MVNLNRG R+
Sbjct: 889  LG-----GQGSRYQSGTTSRGGQMDGSGR-MVNLNRGGRS 922


>ref|XP_004231314.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Solanum lycopersicum]
          Length = 669

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 41/99 (41%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
 Frame = +1

Query: 49  PLRRKDGQDYAAT--GGGRWQEXXXXXXXXXXXXXXXXXXXXXXXXAQFTRDRTGRSGGY 222
           P RR+DGQDYAA   GGGRWQ+                         Q +RDRT ++ G 
Sbjct: 576 PPRRRDGQDYAAAAGGGGRWQDFSFSQGRQGSSGGRTGYAGSRSTSGQTSRDRTNQARGT 635

Query: 223 HGSRHQDGPGRMHQTGSTVRGGQVDGYTRPMVNLNRGVR 339
            G     G G  +Q+G+T +G Q+DG  R MVNLNRG R
Sbjct: 636 LG-----GQGSRYQSGTTSKGSQMDGSGR-MVNLNRGGR 668


>emb|CBI29961.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/102 (44%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
 Frame = +1

Query: 49   PLRRKDGQDY--AATGGGRWQEXXXXXXXXXXXXXXXXXXXXXXXXAQFTRDRTGRSGGY 222
            PLRR+DGQDY  AA+ GG+WQ+                           +R   G SGGY
Sbjct: 754  PLRRRDGQDYAGAASVGGKWQDNFSFSQGRQGGQ---------------SRGTGGYSGGY 798

Query: 223  HGSRHQDGP-GR-MHQTGSTVRGGQVDGYTRPMVNLNRGVRA 342
              +R+QD   GR  +QT S VRG Q+D  TR MV+LNRGVRA
Sbjct: 799  QSTRYQDAAYGRTAYQTSSAVRGSQMDTSTR-MVSLNRGVRA 839


>ref|XP_006350770.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Solanum tuberosum]
          Length = 914

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
 Frame = +1

Query: 49   PLRRKDGQDYAAT---GGGRWQEXXXXXXXXXXXXXXXXXXXXXXXXAQFTRDRTGRSGG 219
            P RR++GQDYAA    G G+WQ+                         Q +RDRTG+   
Sbjct: 821  PPRRREGQDYAAAAAGGTGKWQDFSFSQGRQGSSGGRTGYNAGRFASGQASRDRTGQ--- 877

Query: 220  YHGSRHQDGPGRMHQTGSTVRGG-QVDGYTRPMVNLNRGVRA 342
               +R   G G  +QT +  RGG  +DG    MVNLNRG+RA
Sbjct: 878  ---ARIHGGQGSRYQTNAAARGGHNMDG--SRMVNLNRGIRA 914


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