BLASTX nr result
ID: Rehmannia25_contig00020053
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00020053
(339 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE04585.2| OSJNBb0006N15.2 [Oryza sativa Japonica Group] 52 8e-15
gb|ABA93940.1| retrotransposon protein, putative, Ty1-copia subc... 51 1e-14
emb|CAD39835.2| OSJNBb0072N21.1 [Oryza sativa Japonica Group] 53 2e-14
emb|CCI55284.1| PH01B001G05.7 [Phyllostachys edulis] 52 4e-14
gb|AAP53706.1| retrotransposon protein, putative, unclassified [... 52 4e-14
gb|ABA98847.1| retrotransposon protein, putative, unclassified [... 52 4e-14
gb|AAT93986.1| putative polyprotein [Oryza sativa Japonica Group] 51 7e-14
gb|ABA98369.1| retrotransposon protein, putative, Ty1-copia subc... 52 9e-14
gb|AAX96493.1| retrotransposon protein, putative, unclassified [... 52 1e-13
gb|AAM23248.1|AC092553_14 Putative copia-type pol polyprotein [O... 52 1e-13
gb|ABB46679.2| retrotransposon protein, putative, unclassified [... 52 1e-13
dbj|BAH79981.1| putative unclassified retrotransposon protein [O... 49 1e-13
gb|AAT76321.1| putative integrase [Oryza sativa Japonica Group] ... 49 2e-13
gb|ABA91128.1| retrotransposon protein, putative, unclassified [... 49 2e-13
gb|AAX96275.1| retrotransposon protein, putative, unclassified [... 52 2e-13
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212... 48 3e-13
gb|AAM08523.1|AC068654_25 Putative retroelement [Oryza sativa Ja... 51 3e-13
emb|CAE01974.2| OSJNBb0051N19.3 [Oryza sativa Japonica Group] 50 3e-13
emb|CAD40455.2| OSJNBa0041M21.13 [Oryza sativa Japonica Group] g... 51 3e-13
gb|ABA97696.1| retrotransposon protein, putative, unclassified [... 51 5e-13
>emb|CAE04585.2| OSJNBb0006N15.2 [Oryza sativa Japonica Group]
Length = 1134
Score = 51.6 bits (122), Expect(3) = 8e-15
Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFIN-GLVRLIQVPRIWFDR 109
+ FKLYQMDVKS FLNGFIQ EVY + F + ++ L L Q PR W+DR
Sbjct: 784 KGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRAWYDR 843
Query: 108 LSYF 97
L F
Sbjct: 844 LKNF 847
Score = 45.8 bits (107), Expect(3) = 8e-15
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = -3
Query: 100 FLQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
FL FT GKVD TLFV + G + LFVQIYVDD
Sbjct: 848 FLAKGFTMGKVDKTLFVLKHGDNQLFVQIYVDD 880
Score = 27.7 bits (60), Expect(3) = 8e-15
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
DFD TFA +A +E I +LLA + K
Sbjct: 760 DFDETFAPVARIEAIRLLLAFAASK 784
>gb|ABA93940.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1508
Score = 50.8 bits (120), Expect(3) = 1e-14
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFIN-GLVRLIQVPRIWFDR 109
+ FKLYQMDV S+FLNGFIQ EVY + F + ++ L L Q PR W+DR
Sbjct: 1099 KGFKLYQMDVNSDFLNGFIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRAWYDR 1158
Query: 108 LSYF 97
L F
Sbjct: 1159 LKNF 1162
Score = 45.8 bits (107), Expect(3) = 1e-14
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L FT GKVD TLFVF+ G + LFVQIYVDD
Sbjct: 1164 LAKGFTMGKVDKTLFVFKHGDNQLFVQIYVDD 1195
Score = 27.7 bits (60), Expect(3) = 1e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
DFD TFA +A +E I +LLA + K
Sbjct: 1075 DFDETFAPVARIEAIRLLLAFAASK 1099
>emb|CAD39835.2| OSJNBb0072N21.1 [Oryza sativa Japonica Group]
Length = 420
Score = 53.1 bits (126), Expect(3) = 2e-14
Identities = 32/64 (50%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVY-RSLKFLGQMIFINGLVRLI-------QVPRIWFDR 109
+ FKLYQMDVKS FLNGFIQ EVY + L F N + +L Q PR W+DR
Sbjct: 85 KGFKLYQMDVKSAFLNGFIQEEVYVKQLPGFENSDFPNHVFKLSKTLYGLKQAPRAWYDR 144
Query: 108 LSYF 97
L F
Sbjct: 145 LKNF 148
Score = 43.1 bits (100), Expect(3) = 2e-14
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L FT GKVD TLF+ + G + LFVQIYVDD
Sbjct: 150 LAKGFTMGKVDKTLFILKHGDNQLFVQIYVDD 181
Score = 27.7 bits (60), Expect(3) = 2e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
DFD TFA +A +E I +LLA + K
Sbjct: 61 DFDETFAHVARIEAIRLLLAFAASK 85
>emb|CCI55284.1| PH01B001G05.7 [Phyllostachys edulis]
Length = 1697
Score = 52.4 bits (124), Expect(3) = 4e-14
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFIN-GLVRLIQVPRIWFDR 109
+ FKL+QMDVKS+FLNGFI+ EVY + KF + ++ L L Q PR W+DR
Sbjct: 1265 KGFKLFQMDVKSSFLNGFIEEEVYVKQPPGFENPKFPNHVFKLSKALYGLKQAPRAWYDR 1324
Query: 108 LSYF 97
L F
Sbjct: 1325 LKSF 1328
Score = 42.0 bits (97), Expect(3) = 4e-14
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L+NDF G VD TLF G D L VQIYVDD
Sbjct: 1330 LKNDFKMGMVDKTLFSLRHGNDFLMVQIYVDD 1361
Score = 28.5 bits (62), Expect(3) = 4e-14
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFKKISSF 249
DF+ TFA +A LE I ILLA + K F
Sbjct: 1241 DFEETFAPVARLEAIRILLAFAASKGFKLF 1270
>gb|AAP53706.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1419
Score = 51.6 bits (122), Expect(3) = 4e-14
Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFIN-GLVRLIQVPRIWFDR 109
+ FKLYQMDVKS FLNGFIQ EVY + F + ++ L L Q PR W+DR
Sbjct: 1010 KGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRAWYDR 1069
Query: 108 LSYF 97
L F
Sbjct: 1070 LKNF 1073
Score = 43.5 bits (101), Expect(3) = 4e-14
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L FT GKVD TLFV + G + LFVQIYVDD
Sbjct: 1075 LAKGFTMGKVDKTLFVLKHGDNQLFVQIYVDD 1106
Score = 27.7 bits (60), Expect(3) = 4e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
DFD TFA +A +E I +LLA + K
Sbjct: 986 DFDETFAPVARIEAIRLLLAFAASK 1010
>gb|ABA98847.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1417
Score = 51.6 bits (122), Expect(3) = 4e-14
Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFIN-GLVRLIQVPRIWFDR 109
+ FKLYQMDVKS FLNGFIQ EVY + F + ++ L L Q PR W+DR
Sbjct: 1008 KGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRAWYDR 1067
Query: 108 LSYF 97
L F
Sbjct: 1068 LKNF 1071
Score = 43.5 bits (101), Expect(3) = 4e-14
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L FT GKVD TLFV + G + LFVQIYVDD
Sbjct: 1073 LAKGFTMGKVDKTLFVLKHGDNQLFVQIYVDD 1104
Score = 27.7 bits (60), Expect(3) = 4e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
DFD TFA +A +E I +LLA + K
Sbjct: 984 DFDETFAPVARIEAIRLLLAFAASK 1008
>gb|AAT93986.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1326
Score = 50.8 bits (120), Expect(3) = 7e-14
Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFIN-GLVRLIQVPRIWFDR 109
+ FKLYQMDVKS FLNGFIQ EVY + F + ++ L L Q PR W+DR
Sbjct: 1009 KGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPNLVFKLSKALYGLKQAPRAWYDR 1068
Query: 108 LSYF 97
L F
Sbjct: 1069 LKNF 1072
Score = 43.5 bits (101), Expect(3) = 7e-14
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L FT GKVD TLFV + G + LFVQIYVDD
Sbjct: 1074 LAKGFTMGKVDKTLFVLKHGDNQLFVQIYVDD 1105
Score = 27.7 bits (60), Expect(3) = 7e-14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
DFD TFA +A +E I +LLA + K
Sbjct: 985 DFDETFAPVARIEAIRLLLAFAASK 1009
>gb|ABA98369.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 904
Score = 51.6 bits (122), Expect(3) = 9e-14
Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFIN-GLVRLIQVPRIWFDR 109
+ FKLYQMDVKS FLNGFIQ EVY + F + ++ L L Q PR W+DR
Sbjct: 588 KGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPNHIFKLSKALYGLKQAPRAWYDR 647
Query: 108 LSYF 97
L F
Sbjct: 648 LKNF 651
Score = 43.5 bits (101), Expect(3) = 9e-14
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L FT GKVD TLFV + G + LFVQIYVDD
Sbjct: 653 LAKGFTMGKVDKTLFVLKHGDNQLFVQIYVDD 684
Score = 26.6 bits (57), Expect(3) = 9e-14
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
DFD TFA IA +E I +LL + K
Sbjct: 564 DFDETFAPIARIEAIRLLLTFAASK 588
>gb|AAX96493.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|77548895|gb|ABA91692.1|
retrotransposon protein, putative, unclassified,
expressed [Oryza sativa Japonica Group]
Length = 1299
Score = 52.0 bits (123), Expect(3) = 1e-13
Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFIN-GLVRLIQVPRIWFDR 109
+ FKLYQMDVKS FLNGFIQ EVY + F + ++ L L Q PR W+DR
Sbjct: 976 KGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFSNHVFKLSKALYGLKQAPRAWYDR 1035
Query: 108 LSYF 97
L F
Sbjct: 1036 LKNF 1039
Score = 43.1 bits (100), Expect(3) = 1e-13
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L FT GKVD TLFV + G + LFVQIYVDD
Sbjct: 1041 LVKGFTMGKVDKTLFVLKHGDNQLFVQIYVDD 1072
Score = 26.2 bits (56), Expect(3) = 1e-13
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
DFD TF +A +E I +LLA + K
Sbjct: 952 DFDETFVPVARIEAIRLLLAFAASK 976
>gb|AAM23248.1|AC092553_14 Putative copia-type pol polyprotein [Oryza sativa Japonica Group]
gi|21326491|gb|AAM47619.1|AC122147_8 Putative copia-type
pol polyprotein [Oryza sativa Japonica Group]
Length = 845
Score = 52.4 bits (124), Expect(3) = 1e-13
Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Frame = -1
Query: 276 FLF*ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFIN-GLVRLIQVPRI 121
F + FKLYQMDVKS+FLNGFIQ EVY + +F + ++ L L Q PR
Sbjct: 432 FAISKGFKLYQMDVKSDFLNGFIQEEVYVKQPPGFENPEFPNHVFKLSKALYGLKQAPRA 491
Query: 120 WFDRLSYF 97
W+DR F
Sbjct: 492 WYDRFKNF 499
Score = 42.0 bits (97), Expect(3) = 1e-13
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L F+ GKVD TLFV + G + LFVQIYVDD
Sbjct: 501 LAKGFSMGKVDKTLFVLKHGDNQLFVQIYVDD 532
Score = 26.9 bits (58), Expect(3) = 1e-13
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
DFD TFA +A +E I +LLA + K
Sbjct: 412 DFDETFAHVARVEAIRLLLAFAISK 436
>gb|ABB46679.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 809
Score = 52.4 bits (124), Expect(3) = 1e-13
Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Frame = -1
Query: 276 FLF*ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFIN-GLVRLIQVPRI 121
F + FKLYQMDVKS+FLNGFIQ EVY + +F + ++ L L Q PR
Sbjct: 396 FAISKGFKLYQMDVKSDFLNGFIQEEVYVKQPPGFENPEFPNHVFKLSKALYGLKQAPRA 455
Query: 120 WFDRLSYF 97
W+DR F
Sbjct: 456 WYDRFKNF 463
Score = 42.0 bits (97), Expect(3) = 1e-13
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L F+ GKVD TLFV + G + LFVQIYVDD
Sbjct: 465 LAKGFSMGKVDKTLFVLKHGDNQLFVQIYVDD 496
Score = 26.9 bits (58), Expect(3) = 1e-13
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
DFD TFA +A +E I +LLA + K
Sbjct: 376 DFDETFAHVARVEAIRLLLAFAISK 400
>dbj|BAH79981.1| putative unclassified retrotransposon protein [Oryza sativa Indica
Group]
Length = 1425
Score = 49.3 bits (116), Expect(3) = 1e-13
Identities = 30/64 (46%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFIN-GLVRLIQVPRIWFDR 109
+ FKLYQ DVKS FLNGFIQ EVY + F + ++ L L Q PR W+DR
Sbjct: 1071 KGFKLYQRDVKSAFLNGFIQDEVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRTWYDR 1130
Query: 108 LSYF 97
L F
Sbjct: 1131 LKNF 1134
Score = 44.7 bits (104), Expect(3) = 1e-13
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L FT GKVD TLFV ++G + LFVQIYVDD
Sbjct: 1136 LAKGFTMGKVDKTLFVLKRGDNQLFVQIYVDD 1167
Score = 26.9 bits (58), Expect(3) = 1e-13
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
DFD TFA +A +E I +LLA + K
Sbjct: 1047 DFDETFAPVATIEAIRLLLAFAASK 1071
>gb|AAT76321.1| putative integrase [Oryza sativa Japonica Group]
gi|108709546|gb|ABF97341.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1425
Score = 49.3 bits (116), Expect(3) = 2e-13
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFIN-GLVRLIQVPRIWFDR 109
+ FKLYQMDVKS FLNGFIQ +VY + F + ++ L L Q PR W+DR
Sbjct: 1118 KGFKLYQMDVKSAFLNGFIQEKVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRPWYDR 1177
Query: 108 LSYF 97
L F
Sbjct: 1178 LKNF 1181
Score = 43.1 bits (100), Expect(3) = 2e-13
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L FT GKVD TLFV + G + LF+QIYVDD
Sbjct: 1183 LAKGFTMGKVDKTLFVLKHGDNQLFIQIYVDD 1214
Score = 28.1 bits (61), Expect(3) = 2e-13
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
DFD TFA IA +E I +LLA + K
Sbjct: 1094 DFDETFAPIARIEAIRLLLAFAASK 1118
>gb|ABA91128.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1258
Score = 49.3 bits (116), Expect(3) = 2e-13
Identities = 30/64 (46%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFIN-GLVRLIQVPRIWFDR 109
+ FKLYQMDVKS FLNGFIQ EVY + F + ++ L L Q PR W+D
Sbjct: 952 KGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRAWYDM 1011
Query: 108 LSYF 97
L F
Sbjct: 1012 LKNF 1015
Score = 43.5 bits (101), Expect(3) = 2e-13
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L FT GKVD TLFV + G + LFVQIYVDD
Sbjct: 1017 LTKGFTMGKVDKTLFVLKHGDNQLFVQIYVDD 1048
Score = 27.7 bits (60), Expect(3) = 2e-13
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
DFD TFA +A +E I +LLA + K
Sbjct: 928 DFDETFASVARIEAIRLLLAFATSK 952
>gb|AAX96275.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|77550581|gb|ABA93378.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 1115
Score = 52.0 bits (123), Expect(3) = 2e-13
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFIN-GLVRLIQVPRIWFDR 109
+ FKLYQMDVKS FLNGFIQ EVY + F + ++ GL + Q PR W+D+
Sbjct: 848 KGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPNHVFKLSKGLYGMKQAPRAWYDK 907
Query: 108 LSYF 97
L F
Sbjct: 908 LKNF 911
Score = 40.8 bits (94), Expect(3) = 2e-13
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L FT GKVD TLFV + G + FVQIYVDD
Sbjct: 913 LTKGFTMGKVDKTLFVLKHGDNQPFVQIYVDD 944
Score = 27.7 bits (60), Expect(3) = 2e-13
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
DFD TFA +A +E I +LLA + K
Sbjct: 824 DFDETFAPVARIEAIRLLLAFAASK 848
>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 47.8 bits (112), Expect(3) = 3e-13
Identities = 30/64 (46%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFI-NGLVRLIQVPRIWFDR 109
+NF LYQMDVKS FLNG+I EVY S + + L L Q PR W+DR
Sbjct: 1741 KNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLEKALYGLKQAPRAWYDR 1800
Query: 108 LSYF 97
LS F
Sbjct: 1801 LSKF 1804
Score = 45.1 bits (105), Expect(3) = 3e-13
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L+NDF GK+D TLF+ K D L VQIYVDD
Sbjct: 1806 LENDFKMGKIDNTLFIKVKNNDMLIVQIYVDD 1837
Score = 26.9 bits (58), Expect(3) = 3e-13
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
D++ TFA +A LE I +LLA + +K
Sbjct: 1717 DYEETFAPVARLEAIRMLLAFASYK 1741
>gb|AAM08523.1|AC068654_25 Putative retroelement [Oryza sativa Japonica Group]
gi|31429833|gb|AAP51828.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1522
Score = 50.8 bits (120), Expect(3) = 3e-13
Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFIN-GLVRLIQVPRIWFDR 109
+ FKLYQMDVKS FLNGFIQ EVY + F + ++ L L Q PR W+DR
Sbjct: 1113 KGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPKHVFKLSKALYGLKQAPRAWYDR 1172
Query: 108 LSYF 97
L F
Sbjct: 1173 LKNF 1176
Score = 42.7 bits (99), Expect(3) = 3e-13
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L FT GKVD TLFV + G + LFVQIYVDD
Sbjct: 1178 LTKGFTIGKVDKTLFVLKHGDNQLFVQIYVDD 1209
Score = 26.2 bits (56), Expect(3) = 3e-13
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
DFD TFA +A +E I +LLA + K
Sbjct: 1089 DFDETFANVAIIEAIRLLLAFATSK 1113
>emb|CAE01974.2| OSJNBb0051N19.3 [Oryza sativa Japonica Group]
Length = 1414
Score = 50.1 bits (118), Expect(3) = 3e-13
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFIN-GLVRLIQVPRIWFDR 109
+ FKLYQMDVK+ FLNGFIQ EVY + F + ++ L L Q PR W+DR
Sbjct: 1053 KGFKLYQMDVKNVFLNGFIQEEVYVKQPPGFENPDFPNHVFKLSKSLYGLKQAPRAWYDR 1112
Query: 108 LSYF 97
L F
Sbjct: 1113 LKNF 1116
Score = 42.0 bits (97), Expect(3) = 3e-13
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L FT GKVD TLFV + G + LFVQIYVD+
Sbjct: 1118 LSKGFTMGKVDKTLFVLKHGDNQLFVQIYVDN 1149
Score = 27.7 bits (60), Expect(3) = 3e-13
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
DFD TFA +A +E I +LLA + K
Sbjct: 1029 DFDETFAPVARIEAIRLLLAFAASK 1053
>emb|CAD40455.2| OSJNBa0041M21.13 [Oryza sativa Japonica Group]
gi|38343997|emb|CAD40362.2| OSJNBa0093P23.8 [Oryza
sativa Japonica Group]
Length = 711
Score = 51.2 bits (121), Expect(3) = 3e-13
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVY-------RSLKFLGQMIFIN-GLVRLIQVPRIWFDR 109
++FKLYQMDVKS FLNGFIQ E+Y + F + ++ L L Q PR W+DR
Sbjct: 420 KSFKLYQMDVKSAFLNGFIQEEIYVKQPPGFENPDFPNHVFKLSKDLYGLKQAPRAWYDR 479
Query: 108 LSYF 97
L F
Sbjct: 480 LKNF 483
Score = 43.5 bits (101), Expect(3) = 3e-13
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L FT GKVD TLFV + G + LFVQIYVDD
Sbjct: 485 LAKGFTMGKVDKTLFVLKHGDNQLFVQIYVDD 516
Score = 25.0 bits (53), Expect(3) = 3e-13
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFKKISSF 249
D D TFA +A +E I +LLA + K +
Sbjct: 396 DCDETFAPVARIEAIRLLLAFAASKSFKLY 425
>gb|ABA97696.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1514
Score = 51.2 bits (121), Expect(3) = 5e-13
Identities = 31/64 (48%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Frame = -1
Query: 264 ENFKLYQMDVKSNFLNGFIQIEVYRSL------KFLGQMIF--INGLVRLIQVPRIWFDR 109
+ FKLYQMDVKS FLNGFIQ EVY + +F L L Q PR W+DR
Sbjct: 1105 KGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPYFPNHVFKLSKALYGLKQAPRAWYDR 1164
Query: 108 LSYF 97
L F
Sbjct: 1165 LKNF 1168
Score = 41.2 bits (95), Expect(3) = 5e-13
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -3
Query: 97 LQNDFTRGKVDTTLFVFEKGQDCLFVQIYVDD 2
L FT GKVD TLFV + G + LFV IYVDD
Sbjct: 1170 LVKGFTMGKVDKTLFVLKHGDNQLFVHIYVDD 1201
Score = 26.6 bits (57), Expect(3) = 5e-13
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 338 DFDVTFALIAHLEVICILLAHSCFK 264
DFD TF+ +A +E I +LLA + K
Sbjct: 1081 DFDETFSPVARIEAIRLLLAFAASK 1105