BLASTX nr result

ID: Rehmannia25_contig00019942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00019942
         (299 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272732.2| PREDICTED: protein TIME FOR COFFEE-like [Vit...    63   5e-08
ref|XP_006383666.1| hypothetical protein POPTR_0005s23180g [Popu...    60   4e-07
emb|CAN70427.1| hypothetical protein VITISV_004537 [Vitis vinifera]    60   4e-07

>ref|XP_002272732.2| PREDICTED: protein TIME FOR COFFEE-like [Vitis vinifera]
          Length = 1299

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 46/100 (46%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
 Frame = +1

Query: 19   GLSSHKQPQAQQQTSTKINMHGDHPQQGSKNKVDLI-SQPFPMSFGS--NASIAPVLNFS 189
            G    KQPQ Q Q            QQG K  V+LI SQ F MSF S   ++ A  +NFS
Sbjct: 946  GNPGEKQPQHQSQ------------QQGLKGGVELIPSQAFAMSFASFNGSNTASGINFS 993

Query: 190  SMAQNSAIFQMLPDISWNG------NQMAQHKNFPASEGK 291
            SMAQN  IFQ LPD+  +G       QM Q KN+  SEGK
Sbjct: 994  SMAQNPVIFQSLPDMVRHGYQVAPAAQMTQQKNYQISEGK 1033


>ref|XP_006383666.1| hypothetical protein POPTR_0005s23180g [Populus trichocarpa]
            gi|550339583|gb|ERP61463.1| hypothetical protein
            POPTR_0005s23180g [Populus trichocarpa]
          Length = 1233

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 42/106 (39%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
 Frame = +1

Query: 4    TSTFSGLSSHKQPQAQQQTSTKINMHGDHPQQGSKNKVDLI-SQPFPMSFGS--NASIAP 174
            ++   G  +H + Q QQQ S + N+ G          V+LI SQ F MSF S   +  A 
Sbjct: 882  STNVGGGGNHGEKQQQQQLSQEKNLKGG---------VELIPSQAFAMSFASFNGSKTAS 932

Query: 175  VLNFSSMAQNSAIFQMLPDISWNGNQM------AQHKNFPASEGKS 294
             LNFS+MAQN  I Q  PD++W G Q+       Q KN   SEGK+
Sbjct: 933  NLNFSAMAQNPTILQSFPDMTWQGYQVVSAAQATQKKNHQLSEGKT 978


>emb|CAN70427.1| hypothetical protein VITISV_004537 [Vitis vinifera]
          Length = 1631

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 45/100 (45%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
 Frame = +1

Query: 19   GLSSHKQPQAQQQTSTKINMHGDHPQQGSKNKVDLI-SQPFPMSFGS--NASIAPVLNFS 189
            G    KQ Q Q Q            QQG K  V+LI SQ F MSF S   ++ A  +NFS
Sbjct: 1157 GNPGEKQXQHQSQ------------QQGLKGGVELIPSQAFAMSFASFNGSNTASGINFS 1204

Query: 190  SMAQNSAIFQMLPDISWNG------NQMAQHKNFPASEGK 291
            SMAQN  IFQ LPD+  +G       QM Q KN+  SEGK
Sbjct: 1205 SMAQNPVIFQSLPDMVRHGYQVAPAAQMTQQKNYQISEGK 1244


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