BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00019929
         (560 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ...    60   5e-07

>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
           gi|296081598|emb|CBI20603.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 45/134 (33%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
 Frame = +3

Query: 165 MGFRLNLKWGGXXXXXXXXXXXXXXXXXXXCRGRDSSYFLVRLSAASILYGEAETL-NDT 341
           MGFRLNLKW                      +G+++S+   R S  S+   + E+L  D 
Sbjct: 3   MGFRLNLKWD-FPISCPTLTNSPSRLCTSSVQGKEASFDSTRFSFPSVTSEDCESLYKDP 61

Query: 342 SRAHVCSSSP-QLLENYYLGTRESKMALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQ 518
            +   CSS   Q  EN Y      KM +GK S   L+ ++ N  Q    +D  A +  LQ
Sbjct: 62  FKPFACSSGALQTFENDYSAMEAMKMKIGKCSHGDLFKIV-NASQAPIGEDISASVAGLQ 120

Query: 519 ATQASQFKLLMKNL 560
           A++ASQF LL++NL
Sbjct: 121 ASKASQFSLLLENL 134