BLASTX nr result
ID: Rehmannia25_contig00019537
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00019537
(356 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006358700.1| PREDICTED: pumilio homolog 2-like [Solanum t... 105 5e-21
ref|XP_004240371.1| PREDICTED: pumilio homolog 2-like [Solanum l... 105 5e-21
ref|XP_004241216.1| PREDICTED: pumilio homolog 2-like [Solanum l... 100 3e-19
ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vin... 100 3e-19
ref|XP_006350784.1| PREDICTED: pumilio homolog 2-like isoform X2... 98 1e-18
ref|XP_006350783.1| PREDICTED: pumilio homolog 2-like isoform X1... 98 1e-18
ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max] 92 6e-17
gb|EXC10703.1| Pumilio-2-like protein [Morus notabilis] 92 7e-17
gb|EOY33975.1| Pumilio 2 isoform 3 [Theobroma cacao] 92 9e-17
gb|EOY33974.1| Pumilio 2 isoform 2 [Theobroma cacao] 92 9e-17
gb|EOY33973.1| Pumilio 2 isoform 1 [Theobroma cacao] 92 9e-17
emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera] 89 5e-16
ref|XP_004486985.1| PREDICTED: pumilio homolog 2-like [Cicer ari... 89 6e-16
ref|XP_004294652.1| PREDICTED: pumilio homolog 2-like [Fragaria ... 87 2e-15
ref|XP_002314164.2| hypothetical protein POPTR_0009s03980g [Popu... 86 4e-15
ref|XP_002299859.2| pumilio/Puf RNA-binding domain-containing fa... 86 5e-15
ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula] g... 86 5e-15
gb|ESW04039.1| hypothetical protein PHAVU_011G062300g [Phaseolus... 86 7e-15
gb|EMJ09319.1| hypothetical protein PRUPE_ppa000627mg [Prunus pe... 86 7e-15
ref|XP_006592185.1| PREDICTED: pumilio homolog 2-like isoform X2... 85 9e-15
>ref|XP_006358700.1| PREDICTED: pumilio homolog 2-like [Solanum tuberosum]
Length = 972
Score = 105 bits (263), Expect = 5e-21
Identities = 52/83 (62%), Positives = 61/83 (73%)
Frame = -2
Query: 253 SGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSSAIGDKRKV 74
+ +GF+SEEELRSDPA LS+EDWRF+QRLQGGSSAIGD+RKV
Sbjct: 69 NNSGFMSEEELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRFSQRLQGGSSAIGDRRKV 128
Query: 73 NRNESGNGGRSLFSMPPGFNSKK 5
N+N++GNGGRS F MPPGFNSKK
Sbjct: 129 NKNDNGNGGRSPFPMPPGFNSKK 151
>ref|XP_004240371.1| PREDICTED: pumilio homolog 2-like [Solanum lycopersicum]
Length = 1000
Score = 105 bits (263), Expect = 5e-21
Identities = 52/83 (62%), Positives = 61/83 (73%)
Frame = -2
Query: 253 SGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSSAIGDKRKV 74
+ +GF+SEEELRSDPA LS+EDWRF+QRLQGGSSAIGD+RKV
Sbjct: 69 NNSGFMSEEELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRFSQRLQGGSSAIGDRRKV 128
Query: 73 NRNESGNGGRSLFSMPPGFNSKK 5
N+N++GNGGRS F MPPGFNSKK
Sbjct: 129 NKNDNGNGGRSPFPMPPGFNSKK 151
>ref|XP_004241216.1| PREDICTED: pumilio homolog 2-like [Solanum lycopersicum]
Length = 993
Score = 99.8 bits (247), Expect = 3e-19
Identities = 51/84 (60%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Frame = -2
Query: 253 SGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSSAIGDKRKV 74
+ NGF+SEEELRSDPA LS+EDWRFAQR+QGGSSAIGD+RKV
Sbjct: 69 NNNGFMSEEELRSDPAYLSYYYANVNLNPRLPPPLLSKEDWRFAQRMQGGSSAIGDRRKV 128
Query: 73 NRNESG-NGGRSLFSMPPGFNSKK 5
N+N++G + GRSLF+MPPGFNS K
Sbjct: 129 NKNDNGSSSGRSLFAMPPGFNSIK 152
>ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1065
Score = 99.8 bits (247), Expect = 3e-19
Identities = 51/87 (58%), Positives = 62/87 (71%), Gaps = 3/87 (3%)
Frame = -2
Query: 253 SGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSSA---IGDK 83
+GNGF SEEELRSDPA LS+EDWRFAQRL+GGSS IGD+
Sbjct: 82 NGNGFASEEELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRFAQRLKGGSSGLGGIGDR 141
Query: 82 RKVNRNESGNGGRSLFSMPPGFNSKKQ 2
RK+NRN+SG+ GRS++SMPPGFNS+K+
Sbjct: 142 RKMNRNDSGSVGRSMYSMPPGFNSRKE 168
>ref|XP_006350784.1| PREDICTED: pumilio homolog 2-like isoform X2 [Solanum tuberosum]
Length = 942
Score = 98.2 bits (243), Expect = 1e-18
Identities = 51/84 (60%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Frame = -2
Query: 253 SGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSSAIGDKRKV 74
+ NGF SEEELRSDPA LS+EDWRFAQR+QGGSSAIGD+RKV
Sbjct: 69 NNNGFRSEEELRSDPAYLSYYYANVNLNPRLPPPLLSKEDWRFAQRMQGGSSAIGDRRKV 128
Query: 73 NRNESG-NGGRSLFSMPPGFNSKK 5
N+N++G + GRSLF+MPPGFNS K
Sbjct: 129 NKNDNGSSSGRSLFAMPPGFNSIK 152
>ref|XP_006350783.1| PREDICTED: pumilio homolog 2-like isoform X1 [Solanum tuberosum]
Length = 993
Score = 98.2 bits (243), Expect = 1e-18
Identities = 51/84 (60%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Frame = -2
Query: 253 SGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSSAIGDKRKV 74
+ NGF SEEELRSDPA LS+EDWRFAQR+QGGSSAIGD+RKV
Sbjct: 69 NNNGFRSEEELRSDPAYLSYYYANVNLNPRLPPPLLSKEDWRFAQRMQGGSSAIGDRRKV 128
Query: 73 NRNESG-NGGRSLFSMPPGFNSKK 5
N+N++G + GRSLF+MPPGFNS K
Sbjct: 129 NKNDNGSSSGRSLFAMPPGFNSIK 152
>ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1054
Score = 92.4 bits (228), Expect = 6e-17
Identities = 51/88 (57%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = -2
Query: 256 KSGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSS---AIGD 86
KSGNGF SEEELRSDPA LS+EDWRF QRL+GG+S IGD
Sbjct: 90 KSGNGFSSEEELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRFTQRLKGGASVLGGIGD 149
Query: 85 KRKVNRNESGNGGRSLFSMPPGFNSKKQ 2
+RKVNR + NGGRSLF+ PPGFN +KQ
Sbjct: 150 RRKVNRADD-NGGRSLFATPPGFNMRKQ 176
>gb|EXC10703.1| Pumilio-2-like protein [Morus notabilis]
Length = 1062
Score = 92.0 bits (227), Expect = 7e-17
Identities = 51/90 (56%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Frame = -2
Query: 253 SGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSSA----IGD 86
+GNGF SEEELRSDPA LS+EDWRFAQRL+GG S+ IGD
Sbjct: 87 NGNGFASEEELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRFAQRLKGGGSSGVGGIGD 146
Query: 85 KRKVNR--NESGNGGRSLFSMPPGFNSKKQ 2
+RK +R + G GGRSLFSMPPGFNS+KQ
Sbjct: 147 RRKGSRAAEDGGGGGRSLFSMPPGFNSRKQ 176
>gb|EOY33975.1| Pumilio 2 isoform 3 [Theobroma cacao]
Length = 945
Score = 91.7 bits (226), Expect = 9e-17
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Frame = -2
Query: 256 KSGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSS---AIGD 86
K+GNGF SEEELRSDPA LS+EDW+FAQRL+GG S IGD
Sbjct: 96 KNGNGFASEEELRSDPAYHSYYYSNVNLNPRLPPPLLSKEDWKFAQRLKGGGSVIGGIGD 155
Query: 85 KRKVNRNESGNGGRSLFSMPPGFNSKKQ 2
+RK NR ++G G RSLFSMPPGF+S+KQ
Sbjct: 156 RRKANRADNG-GSRSLFSMPPGFDSRKQ 182
>gb|EOY33974.1| Pumilio 2 isoform 2 [Theobroma cacao]
Length = 1067
Score = 91.7 bits (226), Expect = 9e-17
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Frame = -2
Query: 256 KSGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSS---AIGD 86
K+GNGF SEEELRSDPA LS+EDW+FAQRL+GG S IGD
Sbjct: 96 KNGNGFASEEELRSDPAYHSYYYSNVNLNPRLPPPLLSKEDWKFAQRLKGGGSVIGGIGD 155
Query: 85 KRKVNRNESGNGGRSLFSMPPGFNSKKQ 2
+RK NR ++G G RSLFSMPPGF+S+KQ
Sbjct: 156 RRKANRADNG-GSRSLFSMPPGFDSRKQ 182
>gb|EOY33973.1| Pumilio 2 isoform 1 [Theobroma cacao]
Length = 1067
Score = 91.7 bits (226), Expect = 9e-17
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Frame = -2
Query: 256 KSGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSS---AIGD 86
K+GNGF SEEELRSDPA LS+EDW+FAQRL+GG S IGD
Sbjct: 96 KNGNGFASEEELRSDPAYHSYYYSNVNLNPRLPPPLLSKEDWKFAQRLKGGGSVIGGIGD 155
Query: 85 KRKVNRNESGNGGRSLFSMPPGFNSKKQ 2
+RK NR ++G G RSLFSMPPGF+S+KQ
Sbjct: 156 RRKANRADNG-GSRSLFSMPPGFDSRKQ 182
>emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]
Length = 1039
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/84 (54%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Frame = -2
Query: 244 GFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSSA---IGDKRKV 74
G ++ EELRSDPA LS+EDWRFAQRL+GGSS IGD+RK+
Sbjct: 59 GSMNAEELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRFAQRLKGGSSGLGGIGDRRKM 118
Query: 73 NRNESGNGGRSLFSMPPGFNSKKQ 2
NRN+SG+ GRS++SMPPGFNS+K+
Sbjct: 119 NRNDSGSVGRSMYSMPPGFNSRKE 142
>ref|XP_004486985.1| PREDICTED: pumilio homolog 2-like [Cicer arietinum]
Length = 1050
Score = 89.0 bits (219), Expect = 6e-16
Identities = 47/87 (54%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = -2
Query: 253 SGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSSAIG---DK 83
SGNGF SEEELRSDPA LS+EDWRF QRL+GG+S IG D+
Sbjct: 82 SGNGFASEEELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRFTQRLKGGASVIGGIGDR 141
Query: 82 RKVNRNESGNGGRSLFSMPPGFNSKKQ 2
RKVN NGGRS+F+ PPGFN +K+
Sbjct: 142 RKVNGAADDNGGRSIFAAPPGFNMRKR 168
>ref|XP_004294652.1| PREDICTED: pumilio homolog 2-like [Fragaria vesca subsp. vesca]
Length = 1077
Score = 87.4 bits (215), Expect = 2e-15
Identities = 47/88 (53%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Frame = -2
Query: 256 KSGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSS---AIGD 86
K+GNGF SEEE+RSDPA LS+EDWR AQR++GGSS IGD
Sbjct: 94 KNGNGFSSEEEMRSDPAYLKYYYSNVNMNPRLPPPLLSKEDWRCAQRMKGGSSVLGGIGD 153
Query: 85 KRKVNRNESGNGGRSLFSMPPGFNSKKQ 2
+RKVNR + + GR+++SMPPGFNS+KQ
Sbjct: 154 RRKVNRADDAS-GRAMYSMPPGFNSRKQ 180
>ref|XP_002314164.2| hypothetical protein POPTR_0009s03980g [Populus trichocarpa]
gi|550330981|gb|EEE88119.2| hypothetical protein
POPTR_0009s03980g [Populus trichocarpa]
Length = 1009
Score = 86.3 bits (212), Expect = 4e-15
Identities = 47/88 (53%), Positives = 59/88 (67%), Gaps = 3/88 (3%)
Frame = -2
Query: 256 KSGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSS---AIGD 86
K+GNGF++E+ELRSDPA LS+EDWR AQRL+GGSS IGD
Sbjct: 85 KNGNGFITEKELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRSAQRLKGGSSVLGGIGD 144
Query: 85 KRKVNRNESGNGGRSLFSMPPGFNSKKQ 2
+RK + ++GN GRS+FSMPPGF S+KQ
Sbjct: 145 RRKASGADNGN-GRSMFSMPPGFESRKQ 171
>ref|XP_002299859.2| pumilio/Puf RNA-binding domain-containing family protein [Populus
trichocarpa] gi|550348126|gb|EEE84664.2| pumilio/Puf
RNA-binding domain-containing family protein [Populus
trichocarpa]
Length = 1065
Score = 85.9 bits (211), Expect = 5e-15
Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = -2
Query: 256 KSGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSS---AIGD 86
K+GNGF SE+ELRSDPA LS+EDWR AQRL+GGSS IGD
Sbjct: 85 KNGNGFTSEKELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRSAQRLKGGSSVLGGIGD 144
Query: 85 KRKVNRNESGNGGRSLFSMPPGFNSKKQ 2
+RK +R ++GN GRS+FSMPPGF S+ Q
Sbjct: 145 RRKGSRADNGN-GRSMFSMPPGFESRNQ 171
>ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula]
gi|87241276|gb|ABD33134.1| Nucleic acid binding NABP
[Medicago truncatula] gi|355486444|gb|AES67647.1|
Pumilio-like protein [Medicago truncatula]
Length = 1047
Score = 85.9 bits (211), Expect = 5e-15
Identities = 47/87 (54%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Frame = -2
Query: 253 SGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSSA---IGDK 83
SGNGF SEEELRSDPA LS+EDWRF+QRL+GG+SA IGD+
Sbjct: 83 SGNGFGSEEELRSDPAYLQYYYSNVNLNPRLPPPLLSKEDWRFSQRLKGGASAIGGIGDR 142
Query: 82 RKVNRNESGNGGRSLFSMPPGFNSKKQ 2
RKVN + NGGR++F+ PPGFN++K+
Sbjct: 143 RKVNGADE-NGGRAVFATPPGFNNRKR 168
>gb|ESW04039.1| hypothetical protein PHAVU_011G062300g [Phaseolus vulgaris]
Length = 1047
Score = 85.5 bits (210), Expect = 7e-15
Identities = 47/88 (53%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = -2
Query: 256 KSGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSS---AIGD 86
K NG SEEELRSDPA +S+EDWRF QRL+GG+S IGD
Sbjct: 88 KDVNGIASEEELRSDPAYLSYYYSNVNLNPRLPPPLMSKEDWRFQQRLKGGASVLGGIGD 147
Query: 85 KRKVNRNESGNGGRSLFSMPPGFNSKKQ 2
+RKVNR E NGGRS+FS PPGFN + Q
Sbjct: 148 RRKVNRTEE-NGGRSMFSTPPGFNMRNQ 174
>gb|EMJ09319.1| hypothetical protein PRUPE_ppa000627mg [Prunus persica]
Length = 1062
Score = 85.5 bits (210), Expect = 7e-15
Identities = 48/86 (55%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
Frame = -2
Query: 247 NGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSSA----IGDKR 80
NGF SEEELRSDPA LS+EDWRFAQR++GG S+ IGD+R
Sbjct: 90 NGFASEEELRSDPAYLQYYYSNVNLNPRLPPPLLSKEDWRFAQRMKGGGSSVLGGIGDRR 149
Query: 79 KVNRNESGNGGRSLFSMPPGFNSKKQ 2
KVNR + + RSLFSMPPGFNS+KQ
Sbjct: 150 KVNRADDAS-QRSLFSMPPGFNSRKQ 174
>ref|XP_006592185.1| PREDICTED: pumilio homolog 2-like isoform X2 [Glycine max]
Length = 902
Score = 85.1 bits (209), Expect = 9e-15
Identities = 48/88 (54%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Frame = -2
Query: 256 KSGNGFLSEEELRSDPAXXXXXXXXXXXXXXXXXXXLSREDWRFAQRLQGGSSA---IGD 86
K NG SEEELRSDPA LS+EDWRF QRL+GG+SA IGD
Sbjct: 87 KDVNGIASEEELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRFQQRLKGGASALGGIGD 146
Query: 85 KRKVNRNESGNGGRSLFSMPPGFNSKKQ 2
+RKVNR + N GRSLF+ PPGFN +KQ
Sbjct: 147 RRKVNRTDD-NAGRSLFATPPGFNMRKQ 173