BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00019527
         (1314 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610...   438   e-120
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa...   422   e-115
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...   416   e-114
gb|ABA97970.1| retrotransposon protein, putative, unclassified, ...   416   e-113
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        416   e-113
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   413   e-113
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   410   e-112
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]        409   e-111
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...   408   e-111
gb|ABF94845.1| retrotransposon protein, putative, unclassified [...   405   e-110
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   405   e-110
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]     404   e-110
gb|ABF93966.1| retrotransposon protein, putative, unclassified, ...   403   e-109
gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Ja...   403   e-109
gb|AAX95226.1| retrotransposon protein, putative, unclassified [...   402   e-109
gb|ABA91843.2| retrotransposon protein, putative, unclassified [...   402   e-109
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]                401   e-109
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...   400   e-109
emb|CAJ00274.1| hypothetical protein [Lotus japonicus]                399   e-108
emb|CAJ00278.1| hypothetical protein [Lotus japonicus]                399   e-108

>ref|XP_006475543.1| PREDICTED: uncharacterized protein LOC102610887 [Citrus sinensis]
          Length = 1274

 Score =  438 bits (1126), Expect = e-120
 Identities = 220/439 (50%), Positives = 292/439 (66%), Gaps = 2/439 (0%)
 Frame = +2

Query: 2    KGIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKGQFKW 181
            +G+ATDPAKI++M  WP P S+KALRGFLGLTGYYR+F+  YG I++PLTDL KK  F W
Sbjct: 628  QGVATDPAKIESMKCWPSPNSLKALRGFLGLTGYYRRFIKDYGKISRPLTDLLKKDNFLW 687

Query: 182  HEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLG 361
            +  A   FN LK+AM +APVL + DF KTFV+E DA   G+GAVL Q+  P++Y SK L 
Sbjct: 688  NHTAEEAFNNLKSAMCTAPVLAMPDFQKTFVLECDASGEGIGAVLSQEGRPISYLSKALS 747

Query: 362  LKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTK 541
             KNLGLS YEKE LA++ A++KWRPYL+   F + +D  SLKY+LEQ+ISTP+  K+LTK
Sbjct: 748  PKNLGLSAYEKEMLAVVFAVQKWRPYLLGKHFKVITDHFSLKYMLEQRISTPMQQKWLTK 807

Query: 542  LMGFDFRIEYKKGVDNRVADALSRMDVDEGSCLNITVLQP--VWMEELQSSYENDAVAQG 715
            L+G+DF I ++ G +N+ ADALSR+     + + + +  P  VW+E+L+  +++D   Q 
Sbjct: 808  LIGYDFEIIFRSGRENKAADALSRLQESTENAMVMAISLPIGVWVEQLKQEWQHDPEIQK 867

Query: 716  AITESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQ 895
             I E +      S  ++ N LL YKG+L+VG+ + L++ I+      + GGHSG   T+ 
Sbjct: 868  LIQEIVTNSARHSKFTWENHLLKYKGRLWVGKHSALKQLIMSEAHGGTEGGHSGVRKTLD 927

Query: 896  RV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQL 1075
            RV  +F W  ++  +   V+ CD CQ  KHEN                W  ++MDFIE L
Sbjct: 928  RVKRSFYWKRMQREICSFVAACDNCQRNKHENVLSPGLLQPLPIPEHNWTDISMDFIEGL 987

Query: 1076 PTSNGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIF 1255
            P S+GK  I+VVVDR +KYAHF  L HPYTA  +A  FLD VYKLHGLP+SIVSDRDK+F
Sbjct: 988  PKSSGKQIIFVVVDRLSKYAHFMPLSHPYTALDVAQLFLDNVYKLHGLPNSIVSDRDKVF 1047

Query: 1256 TSHFWQQLFKLLGVQQHLS 1312
            TS FWQ LF LL V   +S
Sbjct: 1048 TSTFWQSLFSLLNVNLLMS 1066


>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1608

 Score =  422 bits (1086), Expect = e-115
 Identities = 207/437 (47%), Positives = 280/437 (64%), Gaps = 1/437 (0%)
 Frame = +2

Query: 5    GIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKG-QFKW 181
            G+ATDPAKIQ +V WPQP ++K LRGFLGL GYYRKFV H+GLI+KPLT L KKG  FKW
Sbjct: 846  GVATDPAKIQDVVSWPQPTTIKKLRGFLGLAGYYRKFVRHFGLISKPLTQLLKKGIPFKW 905

Query: 182  HEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLG 361
                 + F  LK A+ +APVL L DF+K F +E+DA   G+GAVL Q+ HP+AY S+ LG
Sbjct: 906  TPEIESAFQQLKQALVAAPVLALPDFSKHFTIETDASDVGIGAVLSQEKHPIAYLSRALG 965

Query: 362  LKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTK 541
             K  GLS YEKE++AI+LA+E WRPYL QG+FII +D HSL +L EQ++ TP   K  TK
Sbjct: 966  PKTRGLSTYEKEYMAIILAVEHWRPYLQQGEFIILTDHHSLMHLTEQRLHTPWQQKAFTK 1025

Query: 542  LMGFDFRIEYKKGVDNRVADALSRMDVDEGSCLNITVLQPVWMEELQSSYENDAVAQGAI 721
            L+G  ++I Y+KGV N  ADALSR +        I+   P WM+EL   Y+ D  ++  +
Sbjct: 1026 LLGLQYKICYRKGVSNAAADALSRRESPISEVAAISECIPSWMQELMQGYQLDGQSKQLL 1085

Query: 722  TESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQRV 901
             E    P +        G+L YKG+++VG  T L+ +++  + ++ +GGHSG   T ++V
Sbjct: 1086 AELAISPNSRKDYQLCQGILKYKGKIWVGNNTALQHKLVNELHATPLGGHSGFPVTYRKV 1145

Query: 902  *TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQLPT 1081
             + F WPG++ L+ + + +C  C   K +                AW  +++DFIE LP 
Sbjct: 1146 KSLFAWPGMKKLIKEQLQSCQVCLQAKPDRARYPGLLQPLPVPAGAWQTISLDFIEGLPR 1205

Query: 1082 SNGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIFTS 1261
            S+  N I VVVD+F+KY+HF  L HP+ A  +A  F+  +YKLHGLP +I+SDRDKIFTS
Sbjct: 1206 SSHYNCILVVVDKFSKYSHFIPLSHPFNAGGVAQEFMKNIYKLHGLPRAIISDRDKIFTS 1265

Query: 1262 HFWQQLFKLLGVQQHLS 1312
             FW QLF   G   H+S
Sbjct: 1266 QFWDQLFSKFGTDLHMS 1282


>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score =  416 bits (1070), Expect = e-114
 Identities = 205/436 (47%), Positives = 287/436 (65%)
 Frame = +2

Query: 5    GIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKGQFKWH 184
            G+ATDP KI  +V+WP+PQ +  LR FLG+TGYYR+F+ HYG+I +PL D+ +KG F W 
Sbjct: 646  GVATDPDKISTIVEWPKPQDLTQLRSFLGMTGYYRRFIRHYGVICRPLYDMLRKGGFDWK 705

Query: 185  EGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLGL 364
            +     F  LK AMT+APVL L DF++ F +E+DA  +G+G VLMQ   PLAYFS+ LG+
Sbjct: 706  DPQDEAFVKLKLAMTTAPVLALPDFSENFTLETDASGTGIGGVLMQRGRPLAYFSRTLGV 765

Query: 365  KNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTKL 544
            +   +S Y++E LAI+ ++++WR Y +  Q II++DQ SLK++ +QK++  + HK + +L
Sbjct: 766  RAAAMSTYDREALAIIESLKRWRHYFLGTQLIIRTDQQSLKFMTDQKVAEGIQHKLMLRL 825

Query: 545  MGFDFRIEYKKGVDNRVADALSRMDVDEGSCLNITVLQPVWMEELQSSYENDAVAQGAIT 724
            + FD+ IEYKKG +N+VADALSR      S + I++  P W+E + +SY+NDA  +  + 
Sbjct: 826  LEFDYTIEYKKGKENKVADALSRRG---NSVMAISIAVPSWIEAVTNSYQNDANCKELME 882

Query: 725  ESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQRV* 904
            +    P   S  +   G+L YKG++YVG+  ELR  II  +  S++GGHSG  AT QRV 
Sbjct: 883  QLTLAPNADSGYTLNAGVLRYKGRIYVGKDPELRLNIIHSLHMSAVGGHSGRVATYQRVK 942

Query: 905  TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQLPTS 1084
              F WPG++  +H +V  C  CQ  K E+               AW H++MDFIE LP+S
Sbjct: 943  HLFYWPGMKKEIHTMVRECAVCQRSKAEHCHYPGLLEPLPIPDMAWTHISMDFIEGLPSS 1002

Query: 1085 NGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIFTSH 1264
             GK  I+VVVDRFTKYAH   L HPY+   +A  F+D ++KLHG P +IVSDRD+IFTS 
Sbjct: 1003 KGKEVIFVVVDRFTKYAHSVPLSHPYSVQLVAQAFIDNIFKLHGFPIAIVSDRDRIFTSK 1062

Query: 1265 FWQQLFKLLGVQQHLS 1312
             WQ+LFK + VQ   S
Sbjct: 1063 LWQELFKSMKVQLRFS 1078


>gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1548

 Score =  416 bits (1068), Expect = e-113
 Identities = 212/437 (48%), Positives = 288/437 (65%), Gaps = 1/437 (0%)
 Frame = +2

Query: 5    GIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKG-QFKW 181
            G+ATD  K + M+ WP P ++  LRGFLGLTGYYRKFV +YG++AKPLT L KK  +F W
Sbjct: 829  GVATDAEKTKVMLQWPVPTNLTELRGFLGLTGYYRKFVKNYGILAKPLTVLLKKNVKFVW 888

Query: 182  HEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLG 361
             E     F++LK AM+S PVL L +F K F +E+DAC +G+GAVL Q+ HP+A++SK LG
Sbjct: 889  TEHTQKAFDSLKLAMSSTPVLVLPNFAKPFTIETDACSTGIGAVLSQEGHPVAFYSKALG 948

Query: 362  LKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTK 541
            + N  LSIYEKEFLAI++AI+KWRPYL++G F+I++D  SL +L +Q + + L  K +TK
Sbjct: 949  INNQKLSIYEKEFLAIMMAIDKWRPYLLRGPFVIRTDHQSLCHLDDQLLGSELQRKAMTK 1008

Query: 542  LMGFDFRIEYKKGVDNRVADALSRMDVDEGSCLNITVLQPVWMEELQSSYENDAVAQGAI 721
            L+G  ++ +YK+G +N+ ADALSR+     S   I++ QPVW++E+ +SY  D  AQ  +
Sbjct: 1009 LIGLQYKFQYKRGAENKSADALSRVG-HFFSLQAISIAQPVWVQEVVNSYVVDNQAQSLL 1067

Query: 722  TESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQRV 901
            TE      N S  S  +GL+  KG++++G  + L  +II     S++GGHSG  AT  RV
Sbjct: 1068 TELAIMSPNASGFSLVHGLIKKKGRIWLGANSALHTKIISSFHDSAIGGHSGVMATYHRV 1127

Query: 902  *TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQLPT 1081
               F+W GL+  V + +  C  CQ  KHE+               AW  ++MDFIE LP 
Sbjct: 1128 KKLFVWKGLKHSVEEFIQQCVVCQKAKHEHCSSPGLLQPLPIPTGAWQDISMDFIEGLPL 1187

Query: 1082 SNGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIFTS 1261
            S G + I VVVDRFTKYAHF  L HP+TA  +A  +L  V  L+G+P SIVSDRDKIFTS
Sbjct: 1188 SKGSDVILVVVDRFTKYAHFLPLKHPFTAVQVADNYLSKVASLYGMPKSIVSDRDKIFTS 1247

Query: 1262 HFWQQLFKLLGVQQHLS 1312
            HFWQ LFK   +  +L+
Sbjct: 1248 HFWQHLFKRFAIPLNLT 1264


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  416 bits (1068), Expect = e-113
 Identities = 205/436 (47%), Positives = 282/436 (64%)
 Frame = +2

Query: 5    GIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKGQFKWH 184
            G+ATDP K++ +  +P P+SV  LR FLG+TGYYR+F+ +YG++ +PL D+ KK  F+W 
Sbjct: 894  GVATDPKKVEKIATYPTPKSVTDLRKFLGMTGYYRRFIKNYGIVCRPLHDMLKKEGFQWE 953

Query: 185  EGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLGL 364
               T  F TLK  M ++PVL L DF K FV+E+DAC +G+GAVLMQ   PLAYFSK LG 
Sbjct: 954  REQTEAFETLKTHMCTSPVLSLPDFTKEFVIEADACGNGIGAVLMQSGRPLAYFSKTLGP 1013

Query: 365  KNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTKL 544
            K    SIYEKE +AIL A++KWR Y++  + IIK+DQ SLK+++ Q++   + HK L KL
Sbjct: 1014 KAAAQSIYEKEAMAILEALKKWRHYVLGSRLIIKTDQQSLKFMMNQRLVEGIQHKLLLKL 1073

Query: 545  MGFDFRIEYKKGVDNRVADALSRMDVDEGSCLNITVLQPVWMEELQSSYENDAVAQGAIT 724
            M +D+ IEYK G +N VADALSR+   E  C  IT + P W+ ++Q SYE D  A   ++
Sbjct: 1074 MEYDYSIEYKAGKENLVADALSRIPPAE-QCQAITTVIPEWVRDIQRSYEGDVQAHKILS 1132

Query: 725  ESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQRV* 904
                        S   GLL YKG++YVG+ TE+R  +I+   SS+ GGHSG  AT  R+ 
Sbjct: 1133 LIGTEGDTDGSYSQEAGLLRYKGRIYVGENTEIREELIRSYHSSAFGGHSGMRATYHRIK 1192

Query: 905  TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQLPTS 1084
            + F WPGL+  V   +  C  CQ+ K E+               AW H+TMDF+E LP S
Sbjct: 1193 SLFYWPGLKKAVEGFIRECPICQVTKAEHIHIPGLLDPLEVPDMAWAHITMDFVEGLPKS 1252

Query: 1085 NGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIFTSH 1264
            NGK+ I VVVDR TKYAHF A+ HPYT   +   F++ +++LHG+P +I++DRD+IFTS 
Sbjct: 1253 NGKDVILVVVDRLTKYAHFIAMAHPYTVEQVVELFMNNIHRLHGMPMAIITDRDRIFTSQ 1312

Query: 1265 FWQQLFKLLGVQQHLS 1312
             +Q++FK + V+   S
Sbjct: 1313 LFQEIFKSMKVRLKFS 1328


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  413 bits (1061), Expect = e-113
 Identities = 214/432 (49%), Positives = 275/432 (63%), Gaps = 2/432 (0%)
 Frame = +2

Query: 5    GIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKGQFKWH 184
            G+  DP KI+AM++WP P S+K+LRGFLGLTGYYRKF+  YGLIA PLT L KK  FKW 
Sbjct: 771  GVQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFIKGYGLIAAPLTALLKKNSFKWT 830

Query: 185  EGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLGL 364
            E A   F  LK+ +TS PVL L DF+  F ++ DA   G+GAVLMQ   PLAY S+ +  
Sbjct: 831  ESAKRAFQDLKHDVTSPPVLALPDFSIPFTIQCDASGIGVGAVLMQQGRPLAYMSQAIHG 890

Query: 365  KNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTKL 544
            K L LS YEKE +A++LA++KWR YL+   F I++DQ SLKYLLEQK+ TPL  K++TKL
Sbjct: 891  KALQLSTYEKELMALVLAVKKWRSYLLGHNFKIQTDQXSLKYLLEQKMGTPLQQKWITKL 950

Query: 545  MGFDFRIEYKKGVDNRVADALSRM--DVDEGSCLNITVLQPVWMEELQSSYENDAVAQGA 718
            +G++F +EYK+G +N+VADALSR   D  EG    IT     W+E+L++ Y  D   Q  
Sbjct: 951  LGYEFVVEYKQGKENKVADALSRKMEDQKEGKLYAITAPANTWLEQLRTXYAIDPKLQQI 1010

Query: 719  ITESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQR 898
            I               R+GLL YKG+LY+    ELR +I+  + SS  GGHSG + T+ R
Sbjct: 1011 IKNLEQGSLASQNYKQRDGLLFYKGRLYIPASKELREQILYLLHSSPQGGHSGFHKTLHR 1070

Query: 899  V*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQLP 1078
              + F W G+R  V   +  CD CQ  K EN                W  +++DFIE LP
Sbjct: 1071 AKSEFYWEGMRKEVRRFIKECDICQQNKSENIHPAGLLQPLPIPTKVWTDISLDFIEGLP 1130

Query: 1079 TSNGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIFT 1258
             S   + I VVVDR +KYAHF  + HPYTAS +A  FL  ++KLHGLP+SIV+DRD  FT
Sbjct: 1131 NSESYSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLHGLPNSIVTDRDPTFT 1190

Query: 1259 SHFWQQLFKLLG 1294
            S FW++LFKL G
Sbjct: 1191 STFWKELFKLQG 1202


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  410 bits (1055), Expect = e-112
 Identities = 209/437 (47%), Positives = 283/437 (64%)
 Frame = +2

Query: 2    KGIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKGQFKW 181
            +GI TDPAKI+A+ +WPQP ++K LRGFLGL GYYR+FV  +G+IA PL  LTK   F+W
Sbjct: 807  QGIETDPAKIKAVKEWPQPTTLKQLRGFLGLAGYYRRFVRSFGVIAGPLHALTKTDAFEW 866

Query: 182  HEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLG 361
               A   F  LK A+  APVL L  F+K FVVE+DAC  G+GAVLMQ+ HPLAY S+ L 
Sbjct: 867  TAVAQQAFEDLKAALCQAPVLSLPLFDKQFVVETDACGQGIGAVLMQEGHPLAYISRQLK 926

Query: 362  LKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTK 541
             K L LSIYEKE LA++ A+ KWR YL+Q  FIIK+DQ SLKYLLEQ+++TP+  ++L K
Sbjct: 927  GKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPK 986

Query: 542  LMGFDFRIEYKKGVDNRVADALSRMDVDEGSCLNITVLQPVWMEELQSSYENDAVAQGAI 721
            L+ FD+ I+Y++G +N VADALSR++  E   + +TV++   ++++Q+ Y ND+  Q  I
Sbjct: 987  LLEFDYEIQYRQGKENVVADALSRVEGSEVLHMAMTVVECDLLKDIQAGYANDSQLQDII 1046

Query: 722  TESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQRV 901
            T     P +    S+   +L  K ++ V     ++  I+ ++  S +GGHSG + T QRV
Sbjct: 1047 TALQRDPDSKKYFSWSQNILRRKSKIVVPANDNIKNTILLWLHGSGVGGHSGRDVTHQRV 1106

Query: 902  *TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQLPT 1081
               F W G+   +   + +C TCQ CK +                 W  ++MDFIE LP 
Sbjct: 1107 KGLFYWKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPLPIPDTIWSEVSMDFIEGLPV 1166

Query: 1082 SNGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIFTS 1261
            S GK  I VVVDR +K AHF AL HPY+A  +AH +LD V+KLHG P+SIVSDRD +FTS
Sbjct: 1167 SGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNVFKLHGCPTSIVSDRDVVFTS 1226

Query: 1262 HFWQQLFKLLGVQQHLS 1312
             FW++ F L GV   L+
Sbjct: 1227 EFWREFFTLQGVALKLT 1243


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score =  409 bits (1050), Expect = e-111
 Identities = 202/436 (46%), Positives = 278/436 (63%)
 Frame = +2

Query: 5    GIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKGQFKWH 184
            G+A DP K+QA+ +WP P+SV  L GFLGL GYYRKF+  +GLI KPL    KK  F W 
Sbjct: 619  GVAIDPTKVQAVKNWPVPKSVTDLSGFLGLAGYYRKFIKDFGLICKPLFTALKKTGFTWQ 678

Query: 185  EGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLGL 364
            +     F T+K+ +  APVL + +F + F++E+DA  +GLGAVLMQ+N PLAYFSK +G 
Sbjct: 679  DEQQQAFATIKDKLAHAPVLAMPNFTQPFILEADASGTGLGAVLMQNNRPLAYFSKAIGP 738

Query: 365  KNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTKL 544
            K  GLS Y+KE LAIL A++KW+ Y +    II++DQ SLKY+ EQ+++  + HK L KL
Sbjct: 739  KAAGLSTYDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQRLTEGIQHKLLIKL 798

Query: 545  MGFDFRIEYKKGVDNRVADALSRMDVDEGSCLNITVLQPVWMEELQSSYENDAVAQGAIT 724
            + +D++IEYKKG +N+ ADALSR+        + T++ P W+ E+ +SY  D       +
Sbjct: 799  LSYDYKIEYKKGKENKAADALSRIP-SVAQLFSTTIIVPTWITEILASYATDPKCTALES 857

Query: 725  ESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQRV* 904
            +    P      +  +G+L YK +LYVG GT+LR ++ +    S++GGHSGE AT QR  
Sbjct: 858  QLRITPQGHPPYTLTSGILRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAK 917

Query: 905  TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQLPTS 1084
              F WPG++  +   V  C  CQ  K E+               AW H++MDFIE LP S
Sbjct: 918  LLFYWPGMKKDIASYVKLCPVCQKNKSEHNLQPGLLHPLPIPEMAWTHISMDFIEGLPKS 977

Query: 1085 NGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIFTSH 1264
            + K+ IWV+VDRFTKYAHF AL HP+TA  +   F++  YK HGLP+ IVSDRD+IFTS 
Sbjct: 978  DNKDVIWVIVDRFTKYAHFVALSHPFTADQIVTQFVENYYKHHGLPAVIVSDRDRIFTSQ 1037

Query: 1265 FWQQLFKLLGVQQHLS 1312
             W+ +F+  GV+ H S
Sbjct: 1038 TWKDVFEKAGVKLHFS 1053


>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
            gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
            Japonica Group]
          Length = 866

 Score =  408 bits (1048), Expect = e-111
 Identities = 201/436 (46%), Positives = 276/436 (63%)
 Frame = +2

Query: 5    GIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKGQFKWH 184
            G+ATDP K+QA+ +WP P S+  LRGFLGL GYYR+F+ ++G+I +P+ D  KK  F W 
Sbjct: 175  GVATDPVKVQAVQNWPTPTSITELRGFLGLAGYYRRFIKNFGIICRPMFDALKKNNFHWQ 234

Query: 185  EGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLGL 364
            E     F+ +K  +  APVL + DF+  F++E+DA   G+GAVLMQ+  PLAY SK +G 
Sbjct: 235  EVQQQAFDAIKLQLAQAPVLAMPDFSLPFILEADASGHGIGAVLMQNGRPLAYLSKAIGP 294

Query: 365  KNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTKL 544
            K   LS Y+KE LAIL A++KW+ Y +    II++DQ SLKY+ EQ+I+  + HK L KL
Sbjct: 295  KAAALSTYDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQRITEGVQHKLLIKL 354

Query: 545  MGFDFRIEYKKGVDNRVADALSRMDVDEGSCLNITVLQPVWMEELQSSYENDAVAQGAIT 724
            + +D++IEYKKG +N+ ADALSRM   + + L  TV+ P W+ E+ +SY  D       +
Sbjct: 355  LSYDYKIEYKKGQENKAADALSRM--QQLNALTTTVIVPQWITEVAASYSTDPKCHELES 412

Query: 725  ESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQRV* 904
                 P +    + + G+L YK  + VG G  LR +++     S++GGHSGE AT QR+ 
Sbjct: 413  HLHIAPQSHPPYTLKGGILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMK 472

Query: 905  TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQLPTS 1084
              F WPG++  V   V  C  CQ  K E+               AW H+TMDF+E LP S
Sbjct: 473  QLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKS 532

Query: 1085 NGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIFTSH 1264
             GK+ IWV+VDRFTKYAHF  L HP+TA  +   FL+  YKLHGLP+ IVSDRD+IFTS 
Sbjct: 533  EGKDVIWVIVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFTSS 592

Query: 1265 FWQQLFKLLGVQQHLS 1312
             W+++F+  GV+ H S
Sbjct: 593  TWKEVFEKAGVKLHFS 608


>gb|ABF94845.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 937

 Score =  405 bits (1042), Expect = e-110
 Identities = 211/437 (48%), Positives = 277/437 (63%)
 Frame = +2

Query: 2    KGIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKGQFKW 181
            KG++TDP K  AM+ WP P SV  LRGFLGLTGYYRKFV  Y +IA+PLT L KK  F W
Sbjct: 221  KGVSTDPEKTAAMLAWPVPTSVTELRGFLGLTGYYRKFVQGYSIIARPLTLLLKKKAFLW 280

Query: 182  HEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLG 361
             + A   F+ LK AM++ P+L L +F   F +E+DAC  GLGAVL Q  HP+AY+SK LG
Sbjct: 281  TDAAQLAFDQLKTAMSNTPMLALPNFQLPFTLETDACAYGLGAVLSQQGHPIAYYSKTLG 340

Query: 362  LKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTK 541
              N  LSIYEKEFLAI++A++KWR YL +G FIIK+    L +L +Q + T L  K +TK
Sbjct: 341  PVNQKLSIYEKEFLAIMMAVDKWRCYLQRGPFIIKTYHKILCHLDDQILGTELQQKAMTK 400

Query: 542  LMGFDFRIEYKKGVDNRVADALSRMDVDEGSCLNITVLQPVWMEELQSSYENDAVAQGAI 721
            LMG  +  +YK+GV+N VADALSRM      C   +V+QP+W++E+ +SY  D  AQ  +
Sbjct: 401  LMGLQYSFQYKRGVNNIVADALSRMPSSSQFCA-FSVVQPIWIQEMINSYTVDPQAQQLL 459

Query: 722  TESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQRV 901
             E      N    S   G++ ++ ++++G    L  ++I+   +S++GGHSG  AT  R+
Sbjct: 460  AELAVHSPNSQGYSLTQGIIRFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATYHRI 519

Query: 902  *TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQLPT 1081
               F WPGL+  V + V  C  CQ  KHE+               AW  ++MDFIE LP 
Sbjct: 520  KKLFAWPGLKLDVENFVKQCQVCQQAKHEHCRLPGLLAPLPIPKEAWQDISMDFIEGLPR 579

Query: 1082 SNGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIFTS 1261
            S+G NAI VVVDRFTKYA+F  L HP+TAS +AH    TV+K HG+P SIVSDRD++FTS
Sbjct: 580  SDGYNAILVVVDRFTKYANFIPLRHPFTASQVAHLVDKTVFKTHGIPRSIVSDRDRLFTS 639

Query: 1262 HFWQQLFKLLGVQQHLS 1312
             FW  LF     Q  +S
Sbjct: 640  KFWTTLFATWDTQLQMS 656


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  405 bits (1040), Expect = e-110
 Identities = 208/440 (47%), Positives = 284/440 (64%), Gaps = 3/440 (0%)
 Frame = +2

Query: 2    KGIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKGQFKW 181
            +G++TDP KI  + +   P++V  +R FLG+ GYYR+F+  YG+I +PL DL KK  FKW
Sbjct: 916  EGVSTDPKKISDIKNRKPPKNVTEVREFLGMAGYYRRFIKGYGVICRPLHDLLKKDGFKW 975

Query: 182  HEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLG 361
             +     F  LK  M ++PVL L DF++ FV+E+DAC  G+GAVLMQ   PLAYFSK LG
Sbjct: 976  GDTQQEAFELLKEKMCNSPVLALPDFSQPFVIETDACGIGIGAVLMQKGRPLAYFSKALG 1035

Query: 362  LKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTK 541
             K    S+YEKE +AIL A++KWR Y++ G  IIK+DQ SLK+++ Q++   + HK L K
Sbjct: 1036 PKAAAQSVYEKEAIAILEALKKWRHYILGGSLIIKTDQQSLKFMMSQRLVEGIQHKLLLK 1095

Query: 542  LMGFDFRIEYKKGVDNRVADALSRM-DVDEGSCLNITVLQPVWMEELQSSYENDAVAQG- 715
            LM FD+ IEYK G +N VADALSR  ++ E  CL ITV+ P W+++++ SYE D  A   
Sbjct: 1096 LMEFDYVIEYKSGKENLVADALSRSPNLKEEQCLPITVVVPEWVQDIKRSYEEDIFAHKI 1155

Query: 716  -AITESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATV 892
             ++ E+   P     L   +GLL YKG++YVG+ TE+R  +++   +S  GGHSG  AT 
Sbjct: 1156 LSLIETDGDPERHYKL--ESGLLKYKGRIYVGETTEIRMLLLEAYHASYFGGHSGIRATY 1213

Query: 893  QRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQ 1072
             R+   F WPGL+  V   +  C TCQ+ K E+               AW H+TMDFIE 
Sbjct: 1214 HRIKQLFYWPGLKKQVEHYIRECPTCQITKAEHIHIPGLLNPLEVPDMAWTHITMDFIEG 1273

Query: 1073 LPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKI 1252
            LP S GK+ I VVVDR TKYAHF AL HPYT   +   F+D ++KLHG+P  IV+DRD++
Sbjct: 1274 LPKSQGKDVILVVVDRLTKYAHFLALSHPYTVEQVVQIFMDNIHKLHGMPMVIVTDRDRV 1333

Query: 1253 FTSHFWQQLFKLLGVQQHLS 1312
            FTS+F+Q++FK   V+   S
Sbjct: 1334 FTSNFFQEIFKTQKVKLRFS 1353


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score =  404 bits (1039), Expect = e-110
 Identities = 206/441 (46%), Positives = 283/441 (64%), Gaps = 5/441 (1%)
 Frame = +2

Query: 5    GIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKGQFKWH 184
            G+ATDP K+  + +WP P+ V  +R FLG+TGYYR+F+  YG I +P+ D+ KK  F+W 
Sbjct: 779  GVATDPKKVGKIKNWPTPKDVTDVRKFLGMTGYYRRFIQGYGTICRPIHDMLKKNGFQWG 838

Query: 185  EGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLGL 364
               TT F TLK+ + ++PVL L DF++ F +E+DAC  G+GAVLMQ   P+A+FSK LG 
Sbjct: 839  ADQTTAFETLKHKLRTSPVLALPDFDQAFTIEADACGVGIGAVLMQGGRPIAFFSKALGP 898

Query: 365  KNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTKL 544
            K  G SIYEKE +AIL A++KWR Y++  + IIK+DQ SLK+++ Q++   + HK L KL
Sbjct: 899  KAAGQSIYEKEAMAILEALKKWRHYVLGSKLIIKTDQQSLKFMMGQRLVEGIQHKLLLKL 958

Query: 545  MGFDFRIEYKKGVDNRVADALSRMDVDEG---SCLNITVLQPVWMEELQSSYENDAVAQG 715
            M +D+ IEYK G +N VADALSR+   E     C  +TV+ P W+ ++Q SYEND  A  
Sbjct: 959  MEYDYTIEYKSGKENLVADALSRLPQKEAVADRCHPMTVVIPEWIVDIQRSYENDVQAHK 1018

Query: 716  --AITESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENAT 889
              ++  + A P     L    GLL YKG++YVG+ T++RR++I    SSS GGHSG  AT
Sbjct: 1019 ILSLIGTAADPDREYKL--EAGLLKYKGRIYVGEATDIRRQLITTYHSSSFGGHSGMRAT 1076

Query: 890  VQRV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIE 1069
              R+   F W G+R  V   +  C TCQ+ K E+               AW H+TMDFIE
Sbjct: 1077 HHRIKMLFYWHGMRGEVERFIRECPTCQITKSEHVHIPGLLNPLEIPDMAWTHITMDFIE 1136

Query: 1070 QLPTSNGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDK 1249
             LP S GK+ I VVVDR TKYAHF AL HPY    +   F++ ++KLHG+P  I++DRD+
Sbjct: 1137 GLPKSQGKDVILVVVDRLTKYAHFIALAHPYDVEQVVEAFMNNIHKLHGMPMVIITDRDR 1196

Query: 1250 IFTSHFWQQLFKLLGVQQHLS 1312
            IFTS  +Q++FK + V+   S
Sbjct: 1197 IFTSSLFQEIFKAMKVKLRFS 1217


>gb|ABF93966.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1920

 Score =  403 bits (1035), Expect = e-109
 Identities = 202/438 (46%), Positives = 275/438 (62%), Gaps = 2/438 (0%)
 Frame = +2

Query: 5    GIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKG-QFKW 181
            G+ TDP+KI  ++ W  PQSVK LRGFLGL GYYRKFV ++G I KPLT L KKG  FKW
Sbjct: 282  GVTTDPSKIADVLHWKIPQSVKQLRGFLGLAGYYRKFVRNFGTINKPLTQLLKKGVPFKW 341

Query: 182  HEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLG 361
                   FN LK A+ SAPVL L DF+KTF VE+DAC  G+GAVL QD HP+A+ SK LG
Sbjct: 342  TAQMDEAFNALKQALVSAPVLALPDFSKTFTVETDACDMGIGAVLSQDRHPIAFVSKALG 401

Query: 362  LKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTK 541
             K  GLS YEKE+LAILLA+++WR YL   +F+I +D H+L ++ +Q++ TPL HK  TK
Sbjct: 402  PKTRGLSTYEKEYLAILLAVDQWRSYLQHDEFVILTDHHNLMHITDQRLHTPLQHKAFTK 461

Query: 542  LMGFDFRIEYKKGVDNRVADALSRMDVDEGSCL-NITVLQPVWMEELQSSYENDAVAQGA 718
            LMG  +++ Y++G  N  ADALSR D +    L  ++  QP+W+  +   YE D  AQ  
Sbjct: 462  LMGLQYKVCYRRGTSNAAADALSRRDEETNDQLWAVSECQPLWLTAVVKGYETDEQAQQL 521

Query: 719  ITESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQR 898
            +TE    P          G+L YKG++++G    L+++++  + +S +GGHSG   T QR
Sbjct: 522  LTELALHPTAREHFHLVQGVLRYKGKIWIGHNLSLQQQLVTALHASPIGGHSGFPVTYQR 581

Query: 899  V*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQLP 1078
            V   F WP ++ ++   V  C  CQ  K +                AW  +++DFIE LP
Sbjct: 582  VKALFAWPQMKKMIQQWVKNCTICQQAKPDLAKYPGLLQPLPIPEGAWQVVSLDFIEGLP 641

Query: 1079 TSNGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIFT 1258
             S   N I VVVD+F++YAHF  L HP++A  +A +++  +YKLHG+P  ++SDRDKIFT
Sbjct: 642  KSERYNCILVVVDKFSRYAHFVPLSHPFSALDVAVSYMKNIYKLHGMPKVLISDRDKIFT 701

Query: 1259 SHFWQQLFKLLGVQQHLS 1312
            S  W+ LF   G+  HLS
Sbjct: 702  SKLWEFLFLKSGIALHLS 719


>gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1923

 Score =  403 bits (1035), Expect = e-109
 Identities = 202/438 (46%), Positives = 275/438 (62%), Gaps = 2/438 (0%)
 Frame = +2

Query: 5    GIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKG-QFKW 181
            G+ TDP+KI  ++ W  PQSVK LRGFLGL GYYRKFV ++G I KPLT L KKG  FKW
Sbjct: 282  GVTTDPSKIADVLHWKIPQSVKQLRGFLGLAGYYRKFVRNFGTINKPLTQLLKKGVPFKW 341

Query: 182  HEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLG 361
                   FN LK A+ SAPVL L DF+KTF VE+DAC  G+GAVL QD HP+A+ SK LG
Sbjct: 342  TAQMDEAFNALKQALVSAPVLALPDFSKTFTVETDACDMGIGAVLSQDRHPIAFVSKALG 401

Query: 362  LKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTK 541
             K  GLS YEKE+LAILLA+++WR YL   +F+I +D H+L ++ +Q++ TPL HK  TK
Sbjct: 402  PKTRGLSTYEKEYLAILLAVDQWRSYLQHDEFVILTDHHNLMHITDQRLHTPLQHKAFTK 461

Query: 542  LMGFDFRIEYKKGVDNRVADALSRMDVDEGSCL-NITVLQPVWMEELQSSYENDAVAQGA 718
            LMG  +++ Y++G  N  ADALSR D +    L  ++  QP+W+  +   YE D  AQ  
Sbjct: 462  LMGLQYKVCYRRGTSNAAADALSRRDEETNDQLWAVSECQPLWLTAVVKGYETDEQAQQL 521

Query: 719  ITESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQR 898
            +TE    P          G+L YKG++++G    L+++++  + +S +GGHSG   T QR
Sbjct: 522  LTELALHPTAREHFHLVQGVLRYKGKIWIGHNLSLQQQLVTALHASPIGGHSGFPVTYQR 581

Query: 899  V*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQLP 1078
            V   F WP ++ ++   V  C  CQ  K +                AW  +++DFIE LP
Sbjct: 582  VKALFAWPQMKKMIQQWVKNCTICQQAKPDLAKYPGLLQPLPIPEGAWQVVSLDFIEGLP 641

Query: 1079 TSNGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIFT 1258
             S   N I VVVD+F++YAHF  L HP++A  +A +++  +YKLHG+P  ++SDRDKIFT
Sbjct: 642  KSERYNCILVVVDKFSRYAHFVPLSHPFSALDVAVSYMKNIYKLHGMPKVLISDRDKIFT 701

Query: 1259 SHFWQQLFKLLGVQQHLS 1312
            S  W+ LF   G+  HLS
Sbjct: 702  SKLWEFLFLKSGIALHLS 719


>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1513

 Score =  402 bits (1034), Expect = e-109
 Identities = 203/439 (46%), Positives = 281/439 (64%), Gaps = 3/439 (0%)
 Frame = +2

Query: 5    GIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKGQFKWH 184
            G+ATDP K++ +V WP P++V  LR FLG+TGYYR+F+  Y LI +PL D+ KK  F+W 
Sbjct: 849  GVATDPGKVEKIVSWPIPKNVTDLRKFLGMTGYYRRFIQGYVLICRPLHDMLKKEGFQWG 908

Query: 185  EGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLGL 364
            E  T  F  LK  M S+PVL L DF+K F +E+DAC +G+GAVLMQ + P+A++SK LG 
Sbjct: 909  EKQTEAFKFLKQKMCSSPVLTLPDFSKEFTIEADACGTGIGAVLMQGDRPIAFYSKSLGP 968

Query: 365  KNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTKL 544
            K    SIYEKE +AIL A++KWR Y +  + +IK+DQ SLK+++ Q++   + HK L KL
Sbjct: 969  KAAAQSIYEKEAMAILEALKKWRHYFLGSKLVIKTDQQSLKHMMNQRLVEGIQHKLLLKL 1028

Query: 545  MGFDFRIEYKKGVDNRVADALSRMDVDE---GSCLNITVLQPVWMEELQSSYENDAVAQG 715
            M +D+ IEYK G DN VADALSR+  D+     C  ITV+ P W+ ++Q+SYE D  A  
Sbjct: 1029 MEYDYIIEYKAGKDNVVADALSRLPQDQLQTEICNAITVVIPKWIIDVQNSYEGDVQAHK 1088

Query: 716  AITESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQ 895
             ++            S+ NG+L +KG++YVG+ T +R  +I+    S+ GGHSG  AT  
Sbjct: 1089 ILSMIGTNSDPDQHYSFENGILRFKGRIYVGEETSIRTNLIRDYHCSAFGGHSGMRATHH 1148

Query: 896  RV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQL 1075
            R+   F WPGL+  V   +  C  CQ+ K E+               AW H+TMDFIE L
Sbjct: 1149 RIKALFYWPGLKKTVEMFIRECPVCQITKVEHIHIPGLLNPLEVLDMAWTHITMDFIEGL 1208

Query: 1076 PTSNGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIF 1255
            P S  K+AI VVVDR TKYAHF AL HPY+   +   F++ +++LHG+P +I+ DRD+IF
Sbjct: 1209 PKSKWKDAILVVVDRLTKYAHFLALSHPYSVEQVVEIFMNNIHRLHGMPMAIIIDRDRIF 1268

Query: 1256 TSHFWQQLFKLLGVQQHLS 1312
            TS  +Q++FK + VQ   S
Sbjct: 1269 TSQLFQEIFKSMKVQLRFS 1287


>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1411

 Score =  402 bits (1034), Expect = e-109
 Identities = 203/439 (46%), Positives = 281/439 (64%), Gaps = 3/439 (0%)
 Frame = +2

Query: 5    GIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKGQFKWH 184
            G+ATDP K++ +V WP P++V  LR FLG+TGYYR+F+  Y LI +PL D+ KK  F+W 
Sbjct: 747  GVATDPGKVEKIVSWPIPKNVTDLRKFLGMTGYYRRFIQGYVLICRPLHDMLKKEGFQWG 806

Query: 185  EGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLGL 364
            E  T  F  LK  M S+PVL L DF+K F +E+DAC +G+GAVLMQ + P+A++SK LG 
Sbjct: 807  EKQTEAFKFLKQKMCSSPVLTLPDFSKEFTIEADACGTGIGAVLMQGDRPIAFYSKSLGP 866

Query: 365  KNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTKL 544
            K    SIYEKE +AIL A++KWR Y +  + +IK+DQ SLK+++ Q++   + HK L KL
Sbjct: 867  KAAAQSIYEKEAMAILEALKKWRHYFLGSKLVIKTDQQSLKHMMNQRLVEGIQHKLLLKL 926

Query: 545  MGFDFRIEYKKGVDNRVADALSRMDVDE---GSCLNITVLQPVWMEELQSSYENDAVAQG 715
            M +D+ IEYK G DN VADALSR+  D+     C  ITV+ P W+ ++Q+SYE D  A  
Sbjct: 927  MEYDYIIEYKAGKDNVVADALSRLPQDQLQTEICNAITVVIPKWIIDVQNSYEGDVQAHK 986

Query: 716  AITESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQ 895
             ++            S+ NG+L +KG++YVG+ T +R  +I+    S+ GGHSG  AT  
Sbjct: 987  ILSMIGTNSDPDQHYSFENGILRFKGRIYVGEETSIRTNLIRDYHCSAFGGHSGMRATHH 1046

Query: 896  RV*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQL 1075
            R+   F WPGL+  V   +  C  CQ+ K E+               AW H+TMDFIE L
Sbjct: 1047 RIKALFYWPGLKKTVEMFIRECPVCQITKVEHIHIPGLLNPLEVLDMAWTHITMDFIEGL 1106

Query: 1076 PTSNGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIF 1255
            P S  K+AI VVVDR TKYAHF AL HPY+   +   F++ +++LHG+P +I+ DRD+IF
Sbjct: 1107 PKSKWKDAILVVVDRLTKYAHFLALSHPYSVEQVVEIFMNNIHRLHGMPMAIIIDRDRIF 1166

Query: 1256 TSHFWQQLFKLLGVQQHLS 1312
            TS  +Q++FK + VQ   S
Sbjct: 1167 TSQLFQEIFKSMKVQLRFS 1185


>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
          Length = 1602

 Score =  401 bits (1030), Expect = e-109
 Identities = 205/438 (46%), Positives = 274/438 (62%), Gaps = 2/438 (0%)
 Frame = +2

Query: 5    GIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKG-QFKW 181
            G+ATDP+K+Q ++DW  P S K LRGFLGL GYYRKFV ++G+I+KPLT L +KG  + W
Sbjct: 829  GVATDPSKVQDVLDWAVPVSTKKLRGFLGLAGYYRKFVKNFGIISKPLTQLLRKGVPYVW 888

Query: 182  HEGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLG 361
                   F+TLK A+ SAPVL L DF KTF VE+DA   G+GAVL QD HP+AY SK LG
Sbjct: 889  TTETDNAFHTLKQALASAPVLSLPDFQKTFTVETDASDCGIGAVLSQDKHPIAYVSKALG 948

Query: 362  LKNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTK 541
             +  GLS YEKE +AILLA++ WR YL  G+FII +D HSL +L +Q++ TP  HK  TK
Sbjct: 949  PRTRGLSTYEKECMAILLAVDHWRSYLQHGEFIILTDHHSLMHLSDQRLHTPWQHKAFTK 1008

Query: 542  LMGFDFRIEYKKGVDNRVADALSRMDVDEGS-CLNITVLQPVWMEELQSSYENDAVAQGA 718
            L+G  ++I Y+KG  N  ADALSR   D  S    I+   P W+ E+   YE DA A   
Sbjct: 1009 LLGLQYKICYRKGSSNAAADALSRKFQDSNSEIFAISSSVPQWLMEVTQGYEKDAQAAKL 1068

Query: 719  ITESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQR 898
            ++     P         NG++ YK +++VG   EL+ ++I+ + +S +GGHSG   T ++
Sbjct: 1069 LSTLAIHPEKHIHYFLDNGIIRYKNRIWVGNNPELQLKLIRELHASPVGGHSGFPVTYRK 1128

Query: 899  V*TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQLP 1078
            +   F WP ++ ++ + V  C  C   K +                +W  +++DFIE LP
Sbjct: 1129 IKQLFAWPNMKKMIKESVQRCQVCLQAKPDRLKYPGLLQPLPVPEGSWQAVSLDFIEGLP 1188

Query: 1079 TSNGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIFT 1258
             S G N I VVVDRF+KYAHF AL HP+TA  +A  ++  +YKLHGLP +IVSDRDKIFT
Sbjct: 1189 KSAGYNCILVVVDRFSKYAHFVALKHPFTAIDVAQAYMFHIYKLHGLPQTIVSDRDKIFT 1248

Query: 1259 SHFWQQLFKLLGVQQHLS 1312
            S  W+QLF   G + H S
Sbjct: 1249 SQLWEQLFLRAGTKLHYS 1266


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score =  400 bits (1028), Expect = e-109
 Identities = 204/435 (46%), Positives = 284/435 (65%)
 Frame = +2

Query: 8    IATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKGQFKWHE 187
            I TDPAKIQA+ +WP P +VK +RGFLG  GYYR+FV ++G+IA PL  LTK   F W  
Sbjct: 780  IETDPAKIQAVKEWPTPTTVKQVRGFLGFAGYYRRFVRNFGVIAGPLHALTKTDGFCWSL 839

Query: 188  GATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLGLK 367
             A + F+TLK  + +APVL L  F+K F+VE+DAC  G+ AVLMQ  HPLAY S+ L  K
Sbjct: 840  EAQSAFDTLKAVLCNAPVLALPVFDKQFMVETDACGQGIRAVLMQKGHPLAYISRQLKGK 899

Query: 368  NLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTKLM 547
             L LSIYEKE LA + A+ KWR YL+   FIIK+DQ SLKYLLEQ+++TP+  ++L KL+
Sbjct: 900  QLHLSIYEKELLAFIFAVRKWRHYLLPSHFIIKTDQRSLKYLLEQRLNTPVQQQWLPKLL 959

Query: 548  GFDFRIEYKKGVDNRVADALSRMDVDEGSCLNITVLQPVWMEELQSSYENDAVAQGAITE 727
             FD+ I+Y++G +N VADALSR++  E   + +++++  +++E+Q +YE+D V +  I+ 
Sbjct: 960  EFDYEIQYRQGKENLVADALSRVEGSEVLHMALSIVECDFLKEIQVAYESDGVLKDIISA 1019

Query: 728  SIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQRV*T 907
                P      S+   +L  K ++ V    E+  ++++++  S MGG SG +A+ QRV +
Sbjct: 1020 LQQHPDAKKHYSWSQDILRRKSKIVVPNDVEITNKLLQWLHCSGMGGRSGRDASHQRVKS 1079

Query: 908  TFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQLPTSN 1087
             F W G+   +   + +C TCQ CK +N                W  ++MDFIE LP S 
Sbjct: 1080 LFYWKGMVKDIQAFIRSCGTCQQCKSDNAAYPGLLQPLPIPDKIWCDVSMDFIEGLPNSG 1139

Query: 1088 GKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIFTSHF 1267
            GK+ I VVVDR +K AHF AL HPY+A  +A  FLD VYK HG P+SIVSDRD +FTS F
Sbjct: 1140 GKSVIMVVVDRLSKAAHFVALAHPYSALTVAQAFLDNVYKHHGCPTSIVSDRDVLFTSDF 1199

Query: 1268 WQQLFKLLGVQQHLS 1312
            W++ FKL GV+  +S
Sbjct: 1200 WKEFFKLQGVELRMS 1214


>emb|CAJ00274.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score =  399 bits (1025), Expect = e-108
 Identities = 201/436 (46%), Positives = 279/436 (63%)
 Frame = +2

Query: 5    GIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKGQFKWH 184
            G++TD  KI+A+ DWP+P ++K LRGFLGLTGYYR+F+  Y ++A PLTDL +K  F W 
Sbjct: 804  GVSTDSTKIKAIQDWPEPVTIKQLRGFLGLTGYYRRFIKGYSILASPLTDLLRKDGFHWS 863

Query: 185  EGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLGL 364
              A+  F  LKNA+  APVL + D  K F VE+DA  +G+GAVL+QD HP+A+ SK L  
Sbjct: 864  AAASAAFLQLKNALVQAPVLAIPDLQKPFTVETDASSTGIGAVLLQDKHPVAFISKVLSP 923

Query: 365  KNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTKL 544
            +N  LS+Y++E LA++ A+ KW  YL   QF I +DQ SLK+LLEQ++STP  ++++TKL
Sbjct: 924  RNRLLSVYDRELLALVHAVTKWHQYLAIQQFTILTDQQSLKFLLEQRLSTPAQYRWVTKL 983

Query: 545  MGFDFRIEYKKGVDNRVADALSRMDVDEGSCLNITVLQPVWMEELQSSYENDAVAQGAIT 724
            MG  + I+YK+G +N VADALSR    E   L+++ +       L  +Y  D   Q  I+
Sbjct: 984  MGLSYVIQYKRGKENVVADALSRASHGELFQLSVSSISSELWGLLTQAYAADEALQQLIS 1043

Query: 725  ESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQRV* 904
            + +A P   +  S  +G L  K +L +   +++R  I++++ SS  GGHSG  ATV R+ 
Sbjct: 1044 QVLAQPQLHAHYSVVDGFLFRKHRLMIPNNSQVRTLILEWLHSSHQGGHSGIRATVVRIK 1103

Query: 905  TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQLPTS 1084
            + F W GL   V D +  C+TC  CK+E                 W  + MDFI++LP S
Sbjct: 1104 SLFFWKGLSKDVADFIQKCETCLRCKYERVASPGLLQPLPIPAGVWQSIAMDFIDKLPKS 1163

Query: 1085 NGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIFTSH 1264
            +GK+AIWVV+DR +KYAHF  L HPYTAS LA  F+  VY+LHG PS+IVSDRD +FTS 
Sbjct: 1164 HGKDAIWVVIDRLSKYAHFIPLTHPYTASTLAEIFIKEVYRLHGAPSNIVSDRDPLFTST 1223

Query: 1265 FWQQLFKLLGVQQHLS 1312
            FW    + LG+ Q L+
Sbjct: 1224 FWTAFLQQLGISQSLT 1239


>emb|CAJ00278.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score =  399 bits (1024), Expect = e-108
 Identities = 201/436 (46%), Positives = 279/436 (63%)
 Frame = +2

Query: 5    GIATDPAKIQAMVDWPQPQSVKALRGFLGLTGYYRKFVLHYGLIAKPLTDLTKKGQFKWH 184
            G++TD  KI+A+ DWP+P ++K LRGFLGLTGYYR+F+  Y ++A PLTDL +K  F W 
Sbjct: 804  GVSTDSTKIKAIQDWPEPVTIKQLRGFLGLTGYYRRFIKGYSILASPLTDLLRKDGFHWS 863

Query: 185  EGATTTFNTLKNAMTSAPVLQLQDFNKTFVVESDACYSGLGAVLMQDNHPLAYFSKPLGL 364
              A+  F  LKNA+  APVL + D  K F VE+DA  +G+GAVL+QD HP+A+ SK L  
Sbjct: 864  AAASAAFLQLKNALVQAPVLAIPDLQKPFTVETDASSTGIGAVLLQDKHPVAFISKVLSP 923

Query: 365  KNLGLSIYEKEFLAILLAIEKWRPYLIQGQFIIKSDQHSLKYLLEQKISTPLHHKYLTKL 544
            +N  LS+Y++E LA++ A+ KW  YL   QF I +DQ SLK+LLEQ++STP  ++++TKL
Sbjct: 924  RNRLLSVYDRELLALVHAVTKWHQYLAIQQFTILTDQQSLKFLLEQRLSTPAQYRWVTKL 983

Query: 545  MGFDFRIEYKKGVDNRVADALSRMDVDEGSCLNITVLQPVWMEELQSSYENDAVAQGAIT 724
            MG  + I+YK+G +N VADALSR    E   L+++ +       L  +Y  D   Q  I+
Sbjct: 984  MGLSYVIQYKRGKENVVADALSRASHGELFQLSVSSVSSELWGLLTQAYAADEALQQLIS 1043

Query: 725  ESIAFPFNLSLLSYRNGLLCYKGQLYVGQGTELRRRIIKYMLSSSMGGHSGENATVQRV* 904
            + +A P   +  S  +G L  K +L +   +++R  I++++ SS  GGHSG  ATV R+ 
Sbjct: 1044 QVLAQPQLHAHYSVVDGFLFRKHRLMIPNNSQVRTLILEWLHSSHQGGHSGIRATVVRIK 1103

Query: 905  TTFMWPGLRSLVHDVVSTCDTCQLCKHENRXXXXXXXXXXXXXXAWLHLTMDFIEQLPTS 1084
            + F W GL   V D +  C+TC  CK+E                 W  + MDFI++LP S
Sbjct: 1104 SLFFWKGLSKDVADFIQKCETCLRCKYERVASPGLLQPLPIPAGVWQSIAMDFIDKLPKS 1163

Query: 1085 NGKNAIWVVVDRFTKYAHFFALHHPYTASHLAHTFLDTVYKLHGLPSSIVSDRDKIFTSH 1264
            +GK+AIWVV+DR +KYAHF  L HPYTAS LA  F+  VY+LHG PS+IVSDRD +FTS 
Sbjct: 1164 HGKDAIWVVIDRLSKYAHFIPLTHPYTASTLAEIFIKEVYRLHGAPSNIVSDRDPLFTST 1223

Query: 1265 FWQQLFKLLGVQQHLS 1312
            FW    + LG+ Q L+
Sbjct: 1224 FWTAFLQQLGISQSLT 1239