BLASTX nr result
ID: Rehmannia25_contig00019408
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00019408
(515 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS71674.1| hypothetical protein M569_03083, partial [Genlise... 342 4e-92
ref|XP_004145565.1| PREDICTED: splicing factor U2af small subuni... 338 4e-91
ref|XP_006415744.1| hypothetical protein EUTSA_v10008280mg [Eutr... 335 3e-90
ref|XP_006305464.1| hypothetical protein CARUB_v10009885mg [Caps... 335 3e-90
ref|NP_174086.1| splicing factor U2af small subunit A [Arabidops... 335 3e-90
dbj|BAJ34257.1| unnamed protein product [Thellungiella halophila] 335 3e-90
ref|XP_002890741.1| hypothetical protein ARALYDRAFT_472969 [Arab... 335 3e-90
ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, pu... 335 4e-90
ref|XP_002276502.1| PREDICTED: splicing factor U2af small subuni... 335 4e-90
gb|EOX94588.1| Zinc finger C-x8-C-x5-C-x3-H type family protein ... 334 6e-90
ref|XP_004300085.1| PREDICTED: splicing factor U2af small subuni... 332 2e-89
gb|EXB56251.1| Splicing factor U2af small subunit A [Morus notab... 331 7e-89
ref|XP_002300614.1| hypothetical protein POPTR_0002s00480g [Popu... 330 1e-88
gb|AAL06331.1|AF409139_1 U2 auxiliary factor small subunit [Arab... 329 2e-88
ref|XP_002307825.1| U2 snRNP auxiliary factor small subunit fami... 328 6e-88
ref|XP_006495305.1| PREDICTED: splicing factor U2af small subuni... 327 8e-88
ref|XP_006435479.1| hypothetical protein CICLE_v10003384mg [Citr... 327 8e-88
ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arab... 327 1e-87
ref|NP_199096.1| Splicing factor U2af small subunit B [Arabidops... 327 1e-87
ref|XP_004969477.1| PREDICTED: splicing factor U2af small subuni... 325 4e-87
>gb|EPS71674.1| hypothetical protein M569_03083, partial [Genlisea aurea]
Length = 278
Score = 342 bits (876), Expect = 4e-92
Identities = 161/168 (95%), Positives = 167/168 (99%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DFFEDI+EEL KFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNAL+GRFYSGRPI
Sbjct: 80 DFFEDIFEELSKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALRGRFYSGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGK 12
IADFSPVTDFREATCRQYEE+SCNRGGYCNFMHVKMIGR+LR+KLFG+
Sbjct: 140 IADFSPVTDFREATCRQYEEDSCNRGGYCNFMHVKMIGRDLRKKLFGR 187
>ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
sativus] gi|449485076|ref|XP_004157064.1| PREDICTED:
splicing factor U2af small subunit B-like [Cucumis
sativus]
Length = 276
Score = 338 bits (867), Expect = 4e-91
Identities = 158/169 (93%), Positives = 166/169 (98%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPI+ RKIQEHFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DF+EDIYEEL KFGEIESLNVCDNLADHMIGNVYVQF+EEDQAAAAL ALQGRFYSGRPI
Sbjct: 80 DFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
IADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVKMIG++LRRKLFG++
Sbjct: 140 IADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY 188
>ref|XP_006415744.1| hypothetical protein EUTSA_v10008280mg [Eutrema salsugineum]
gi|557093515|gb|ESQ34097.1| hypothetical protein
EUTSA_v10008280mg [Eutrema salsugineum]
Length = 308
Score = 335 bits (860), Expect = 3e-90
Identities = 155/169 (91%), Positives = 165/169 (97%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP++ RKIQEHFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPLDPRKIQEHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DFFED++EEL KFGEIESLN+CDNLADHMIGNVYVQFKEEDQAAAAL ALQGRFYSGRPI
Sbjct: 80 DFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYSGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
IADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK++ RELRRKLFG++
Sbjct: 140 IADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRY 188
>ref|XP_006305464.1| hypothetical protein CARUB_v10009885mg [Capsella rubella]
gi|482574175|gb|EOA38362.1| hypothetical protein
CARUB_v10009885mg [Capsella rubella]
Length = 296
Score = 335 bits (860), Expect = 3e-90
Identities = 155/169 (91%), Positives = 165/169 (97%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP++ RKIQEHFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPLDPRKIQEHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DFFED++EEL KFGEIESLN+CDNLADHMIGNVYVQFKEEDQAAAAL ALQGRFYSGRPI
Sbjct: 80 DFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYSGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
IADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK++ RELRRKLFG++
Sbjct: 140 IADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRY 188
>ref|NP_174086.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
gi|75336807|sp|Q9S709.1|U2AFA_ARATH RecName:
Full=Splicing factor U2af small subunit A; AltName:
Full=U2 auxiliary factor 35 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit A; Short=U2 snRNP auxiliary factor small
subunit A; AltName: Full=Zinc finger CCCH
domain-containing protein 8; Short=AtC3H8
gi|5668775|gb|AAD46002.1|AC005916_14 Strong similarity
to gb|Y18349 U2 snRNP auxiliary factor, small subunit
from Oryza sativa. ESTs gb|AA586295 and gb|AA597332 come
from this gene [Arabidopsis thaliana]
gi|6693017|gb|AAF24943.1|AC012375_6 T22C5.10
[Arabidopsis thaliana]
gi|12744991|gb|AAK06875.1|AF344324_1 putative U2 snRNP
auxiliary factor [Arabidopsis thaliana]
gi|17528936|gb|AAL38678.1| putative U2 snRNP auxiliary
factor [Arabidopsis thaliana] gi|19699275|gb|AAL91249.1|
At1g27650/T22C5_2 [Arabidopsis thaliana]
gi|20465943|gb|AAM20157.1| putative U2 snRNP auxiliary
factor protein [Arabidopsis thaliana]
gi|21595106|gb|AAM66073.1| putative U2 snRNP auxiliary
factor [Arabidopsis thaliana] gi|21689611|gb|AAM67427.1|
At1g27650/T22C5_2 [Arabidopsis thaliana]
gi|332192737|gb|AEE30858.1| splicing factor U2af small
subunit A [Arabidopsis thaliana]
Length = 296
Score = 335 bits (860), Expect = 3e-90
Identities = 155/169 (91%), Positives = 165/169 (97%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP++ RKIQEHFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPLDPRKIQEHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DFFED++EEL KFGEIESLN+CDNLADHMIGNVYVQFKEEDQAAAAL ALQGRFYSGRPI
Sbjct: 80 DFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYSGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
IADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK++ RELRRKLFG++
Sbjct: 140 IADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRY 188
>dbj|BAJ34257.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 335 bits (860), Expect = 3e-90
Identities = 155/169 (91%), Positives = 165/169 (97%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP++ RKIQEHFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPLDPRKIQEHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DFFED++EEL KFGEIESLN+CDNLADHMIGNVYVQFKEEDQAAAAL ALQGRFYSGRPI
Sbjct: 80 DFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYSGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
IADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK++ RELRRKLFG++
Sbjct: 140 IADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRY 188
>ref|XP_002890741.1| hypothetical protein ARALYDRAFT_472969 [Arabidopsis lyrata subsp.
lyrata] gi|297336583|gb|EFH67000.1| hypothetical protein
ARALYDRAFT_472969 [Arabidopsis lyrata subsp. lyrata]
Length = 296
Score = 335 bits (860), Expect = 3e-90
Identities = 155/169 (91%), Positives = 165/169 (97%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP++ RKIQEHFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPLDPRKIQEHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DFFED++EEL KFGEIESLN+CDNLADHMIGNVYVQFKEEDQAAAAL ALQGRFYSGRPI
Sbjct: 80 DFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYSGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
IADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK++ RELRRKLFG++
Sbjct: 140 IADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRY 188
>ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis] gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary
factor, small subunit, putative [Ricinus communis]
Length = 272
Score = 335 bits (859), Expect = 4e-90
Identities = 156/169 (92%), Positives = 166/169 (98%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPI+ RKIQEHFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DF+EDI+EEL KFGEIESLNVCDNLADHMIGNVYVQF+EEDQAAAAL ALQGRFYSGRPI
Sbjct: 80 DFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
IADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK+IGR+LRRKLFG++
Sbjct: 140 IADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLFGRY 188
>ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
vinifera] gi|359491881|ref|XP_003634337.1| PREDICTED:
splicing factor U2af small subunit B isoform 2 [Vitis
vinifera]
Length = 272
Score = 335 bits (859), Expect = 4e-90
Identities = 156/170 (91%), Positives = 167/170 (98%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPI+ RKIQEHFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DF+EDI+EEL KFGEIESLNVCDNLADHMIGNVYVQFKEE+QAAAAL ALQGRFYSGRPI
Sbjct: 80 DFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEEQAAAALQALQGRFYSGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKHN 6
IADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK+IGR+LRRKLFG+++
Sbjct: 140 IADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLFGRYS 189
>gb|EOX94588.1| Zinc finger C-x8-C-x5-C-x3-H type family protein isoform 1
[Theobroma cacao] gi|508702693|gb|EOX94589.1| Zinc
finger C-x8-C-x5-C-x3-H type family protein isoform 1
[Theobroma cacao]
Length = 279
Score = 334 bits (857), Expect = 6e-90
Identities = 156/169 (92%), Positives = 165/169 (97%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPI+ KIQEHFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPHKIQEHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DF+EDI+EEL KFGEIESLNVCDNLADHMIGNVYVQF+EEDQAAAAL ALQGRFYSGRPI
Sbjct: 80 DFYEDIFEELSKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
IADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK+IGRELRRKLFG++
Sbjct: 140 IADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKVIGRELRRKLFGRY 188
>ref|XP_004300085.1| PREDICTED: splicing factor U2af small subunit B-like [Fragaria
vesca subsp. vesca]
Length = 280
Score = 332 bits (852), Expect = 2e-89
Identities = 154/169 (91%), Positives = 165/169 (97%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVD QGQP++ RKIQ+HFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDPQGQPLDPRKIQDHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DF+EDI+EEL KFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAAL ALQGRFY+GRPI
Sbjct: 80 DFYEDIFEELDKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYNGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
IADFSPVTDFREATCRQ+EENSCNRGGYCNFMHVK+IGRELRRKL+G++
Sbjct: 140 IADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRELRRKLYGRY 188
>gb|EXB56251.1| Splicing factor U2af small subunit A [Morus notabilis]
Length = 348
Score = 331 bits (848), Expect = 7e-89
Identities = 154/169 (91%), Positives = 164/169 (97%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPI+ KIQEHFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPHKIQEHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DF+EDI+EEL KFGEIESLNVCDNLADHMIGNVYVQFKEED AAAAL ALQGRFY+GRPI
Sbjct: 80 DFYEDIFEELCKFGEIESLNVCDNLADHMIGNVYVQFKEEDHAAAALQALQGRFYNGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
IADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK+IGR+LRRKLFG++
Sbjct: 140 IADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLFGRY 188
>ref|XP_002300614.1| hypothetical protein POPTR_0002s00480g [Populus trichocarpa]
gi|566155509|ref|XP_006386121.1| hypothetical protein
POPTR_0002s00480g [Populus trichocarpa]
gi|566155511|ref|XP_006386122.1| U2 snRNP auxiliary
factor small subunit family protein [Populus
trichocarpa] gi|222842340|gb|EEE79887.1| hypothetical
protein POPTR_0002s00480g [Populus trichocarpa]
gi|550343978|gb|ERP63918.1| hypothetical protein
POPTR_0002s00480g [Populus trichocarpa]
gi|550343979|gb|ERP63919.1| U2 snRNP auxiliary factor
small subunit family protein [Populus trichocarpa]
Length = 273
Score = 330 bits (846), Expect = 1e-88
Identities = 153/169 (90%), Positives = 164/169 (97%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP++ KIQEHFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPLDPHKIQEHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
+F+EDI+EEL KFGEIESLNVCDNLADHMIGNVYV FKEEDQAAAAL ALQGRFYSGRPI
Sbjct: 80 EFYEDIFEELNKFGEIESLNVCDNLADHMIGNVYVLFKEEDQAAAALQALQGRFYSGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
IADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK+IGR+LRRKLFG++
Sbjct: 140 IADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLFGRY 188
>gb|AAL06331.1|AF409139_1 U2 auxiliary factor small subunit [Arabidopsis thaliana]
Length = 296
Score = 329 bits (844), Expect = 2e-88
Identities = 153/169 (90%), Positives = 163/169 (96%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP++ RKIQEHFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPLDPRKIQEHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DFFED++EEL KFGEIESLN+CDNLADHMIGNVYVQFKEEDQAAAAL ALQGRFYSGRPI
Sbjct: 80 DFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYSGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
IADFSPVTDFREATCRQYEEN+C RGGYCNFMHVK++ RELRRKL G++
Sbjct: 140 IADFSPVTDFREATCRQYEENNCYRGGYCNFMHVKLVSRELRRKLSGRY 188
>ref|XP_002307825.1| U2 snRNP auxiliary factor small subunit family protein [Populus
trichocarpa] gi|222857274|gb|EEE94821.1| U2 snRNP
auxiliary factor small subunit family protein [Populus
trichocarpa]
Length = 272
Score = 328 bits (840), Expect = 6e-88
Identities = 151/169 (89%), Positives = 163/169 (96%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSN Y RPDMITPGVDAQGQP++ KIQEHFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNTYHRPDMITPGVDAQGQPLDPHKIQEHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DF+EDI+EEL KFGEIE+LNVCDNLADHMIGNVYVQFKEEDQAAAAL +LQGRFYSGRPI
Sbjct: 80 DFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFKEEDQAAAALQSLQGRFYSGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
IADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK+IG++LRRKLFG++
Sbjct: 140 IADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLIGKDLRRKLFGRY 188
>ref|XP_006495305.1| PREDICTED: splicing factor U2af small subunit A-like [Citrus
sinensis]
Length = 266
Score = 327 bits (839), Expect = 8e-88
Identities = 151/169 (89%), Positives = 164/169 (97%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPI+ RKIQEHFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DF+EDI+EEL KFGEIE LNVCDNLADHMIGNVYVQF+EE+QAAAAL+ALQGRFYSGRPI
Sbjct: 80 DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
I +FSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK+IGR+LR KLFG++
Sbjct: 140 IVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRY 188
>ref|XP_006435479.1| hypothetical protein CICLE_v10003384mg [Citrus clementina]
gi|557537601|gb|ESR48719.1| hypothetical protein
CICLE_v10003384mg [Citrus clementina]
Length = 324
Score = 327 bits (839), Expect = 8e-88
Identities = 151/169 (89%), Positives = 164/169 (97%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPI+ RKIQEHFE
Sbjct: 78 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFE 137
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DF+EDI+EEL KFGEIE LNVCDNLADHMIGNVYVQF+EE+QAAAAL+ALQGRFYSGRPI
Sbjct: 138 DFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEEQAAAALHALQGRFYSGRPI 197
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
I +FSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK+IGR+LR KLFG++
Sbjct: 198 IVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRNKLFGRY 246
>ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
lyrata] gi|297309568|gb|EFH39992.1| hypothetical protein
ARALYDRAFT_494737 [Arabidopsis lyrata subsp. lyrata]
Length = 280
Score = 327 bits (837), Expect = 1e-87
Identities = 152/169 (89%), Positives = 160/169 (94%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVD QGQP++ KIQ+HFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDPQGQPLDPSKIQDHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DF+EDI+EEL KFGE+ESLNVCDNLADHMIGNVYV FKEED AAAAL ALQGRFYSGRPI
Sbjct: 80 DFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEEDHAAAALQALQGRFYSGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVK I RELRRKLFG++
Sbjct: 140 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISRELRRKLFGRY 188
>ref|NP_199096.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|42573547|ref|NP_974870.1| Splicing factor U2af small
subunit B [Arabidopsis thaliana]
gi|75334092|sp|Q9FMY5.1|U2AFB_ARATH RecName:
Full=Splicing factor U2af small subunit B; AltName:
Full=U2 auxiliary factor 35 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit B; Short=U2 snRNP auxiliary factor small
subunit B; AltName: Full=Zinc finger CCCH
domain-containing protein 60; Short=AtC3H60
gi|10177285|dbj|BAB10638.1| U2 snRNP auxiliary factor,
small subunit [Arabidopsis thaliana]
gi|22531195|gb|AAM97101.1| U2 snRNP auxiliary factor
small subunit [Arabidopsis thaliana]
gi|23198022|gb|AAN15538.1| U2 snRNP auxiliary factor
small subunit [Arabidopsis thaliana]
gi|332007485|gb|AED94868.1| Splicing factor U2af small
subunit B [Arabidopsis thaliana]
gi|332007486|gb|AED94869.1| Splicing factor U2af small
subunit B [Arabidopsis thaliana]
Length = 283
Score = 327 bits (837), Expect = 1e-87
Identities = 152/169 (89%), Positives = 160/169 (94%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVD QGQP++ KIQ+HFE
Sbjct: 20 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDPQGQPLDPSKIQDHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DF+EDI+EEL KFGE+ESLNVCDNLADHMIGNVYV FKEED AAAAL ALQGRFYSGRPI
Sbjct: 80 DFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEEDHAAAALQALQGRFYSGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVK I RELRRKLFG++
Sbjct: 140 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISRELRRKLFGRY 188
>ref|XP_004969477.1| PREDICTED: splicing factor U2af small subunit B-like isoform X1
[Setaria italica] gi|514779946|ref|XP_004969478.1|
PREDICTED: splicing factor U2af small subunit B-like
isoform X2 [Setaria italica]
gi|514779950|ref|XP_004969479.1| PREDICTED: splicing
factor U2af small subunit B-like isoform X3 [Setaria
italica] gi|514779954|ref|XP_004969480.1| PREDICTED:
splicing factor U2af small subunit B-like isoform X4
[Setaria italica]
Length = 293
Score = 325 bits (833), Expect = 4e-87
Identities = 149/169 (88%), Positives = 162/169 (95%)
Frame = -1
Query: 515 FYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIEARKIQEHFE 336
FYFKIGACRHGDRCSR+HNRPTISPTL+L NMYQRPDMITPGVDAQGQPI+ RK+QEHFE
Sbjct: 20 FYFKIGACRHGDRCSRIHNRPTISPTLVLVNMYQRPDMITPGVDAQGQPIDPRKMQEHFE 79
Query: 335 DFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNALQGRFYSGRPI 156
DF+EDI+EEL KFGEIE+LNVCDNLADHMIGNVYVQF+EEDQAAAA ALQGRFYSGRPI
Sbjct: 80 DFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGRFYSGRPI 139
Query: 155 IADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 9
+ DFSPVTDFREATCRQYEENSCNRGGYCNFMHVK IGR+LR+KLFG++
Sbjct: 140 VVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQIGRDLRKKLFGRY 188