BLASTX nr result
ID: Rehmannia25_contig00019290
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00019290
(1629 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ... 199 8e-54
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 201 4e-53
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 200 5e-53
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 196 5e-51
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 200 3e-50
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 193 3e-50
emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera] 194 4e-50
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera] 186 1e-49
emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera] 184 5e-49
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 183 8e-49
gb|AAB82754.1| retrofit [Oryza longistaminata] 169 9e-48
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 176 2e-47
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 166 2e-46
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 161 4e-45
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 158 1e-44
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 163 2e-44
emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera] 175 7e-44
ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266... 159 1e-40
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 163 8e-40
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc... 166 1e-39
>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
Length = 646
Score = 199 bits (505), Expect(3) = 8e-54
Identities = 123/389 (31%), Positives = 202/389 (51%), Gaps = 6/389 (1%)
Frame = +2
Query: 311 HFLTGKQDQLIASWLLSSLSKNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQ 490
+ L +Q++L+ SW+ SSL++ ++ + +N+A EI +L+ +AS S A+ M+L+L+LQ
Sbjct: 104 YVLWQRQNRLVMSWIYSSLTEQMMTQIMAYNSACEIWTALRESYASASRARIMELRLQLQ 163
Query: 491 TLKKGNMKIREYFNKMKTTCDMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEK 670
T +KG + + +Y +++ CD L +G +S +DQV+ +L GLG +YN +V S+TSR +
Sbjct: 164 TTRKGGLSVMDYMLRIQHICDHLRAIGESVSIDDQVMAVLAGLGSEYNPIVASITSRLDS 223
Query: 671 CNMVEAYCVLLSFEARMEAIEGNKSNNDGSQLGANLTTQTQXXXXXXXXXXXXXXX---- 838
++ L ++E R+E I+ + + Q A + +
Sbjct: 224 ISVQALQSYLETYEKRLE-IQNSVEQHIPLQANAAMYNSNRGKRKPYQQNFHHSQTPVTA 282
Query: 839 --QFQXXXXXXXXXXXXXXXK*GRFSYNNRARC*ICNYSNHTTEKCYYRFDMNFAPKTQN 1012
F K GR + +R +C IC H +C++RFD F PK +
Sbjct: 283 THNFNHRNSSQGGFRGGHSNK-GRANPGSRPQCQICCKIGHVATECWHRFDNQFQPKASH 341
Query: 1013 NNNFQQS*CTINSPSVSVARFGNQVTESPQDIYWYPYSGVTNHLTYDLGNLNLDADYQGN 1192
+N F S P +A G + E+P W+ +G T+H+T DL NL+L + G+
Sbjct: 342 SNQFSSS---AQDPQALMAAPG-LLGETP----WFLDTGATHHVTSDLANLSLHNPFSGD 393
Query: 1193 ERIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFF 1372
+++ +G + + H G+ I P S LL N+LHVP+I NL+SV + DNN +
Sbjct: 394 DKVIVGNGKGLYVLHTGHSSI---PTSQGALLLKNVLHVPKIAANLVSVQKLCHDNNAYV 450
Query: 1373 EFHPFLCAVKDLNSGTILLKGTLKDGQYN 1459
EF+P AVKD + ILLKG L G Y+
Sbjct: 451 EFYPSYFAVKDQKTQAILLKGGLDKGLYS 479
Score = 34.7 bits (78), Expect(3) = 8e-54
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 93 TTMTNHVIQLQSQLITTKLNESNYLIWEQQILTTIKGYGLLGYLTGEQAISY 248
TT N + Q +T KL+ +N+LIW Q+L + G L G ++ Y
Sbjct: 31 TTGINSNLPTFGQTLTIKLDRNNFLIWRNQLLNIVVANGYEDILEGTRSCPY 82
Score = 26.9 bits (58), Expect(3) = 8e-54
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 1572 VWHYRMGHPSYDIMKRAL 1625
+WH R+GHPS I+ + L
Sbjct: 510 LWHNRLGHPSLAIVNKVL 527
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 201 bits (512), Expect(3) = 4e-53
Identities = 128/395 (32%), Positives = 206/395 (52%), Gaps = 12/395 (3%)
Frame = +2
Query: 326 KQDQLIASWLLSSLSKNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKG 505
+QD+ I SW+ SSL+ I+ +G NT+ ++L++ F+S S A+ MQL+LELQ+ KKG
Sbjct: 90 RQDRTILSWIYSSLTPGIMAQIIGHNTSHSAWNALESIFSSSSRARIMQLRLELQSTKKG 149
Query: 506 NMKIREYFNKMKTTCDMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVE 685
+M + +Y K+K D LA +G +SE DQV+ LL GLG DYN++V ++ R +K ++
Sbjct: 150 SMSMIDYIMKIKGAADNLAAIGEPVSEQDQVMNLLGGLGSDYNAVVTAINIRDDKISLEA 209
Query: 686 AYCVLLSFEARMEAIEGNKSNNDGSQLGANLTTQTQXXXXXXXXXXXXXXXQFQXXXXXX 865
+ +LL+FE R+E + Q+ AN + + + Q
Sbjct: 210 IHSMLLAFEHRLE------QQSSIEQMSANYASSSN----NRGGGRKFNGGRGQGYSPNN 259
Query: 866 XXXXXXXXXK*GR--------FSYNNRARC*ICNYSNHTTEKCYYRFDMNF----APKTQ 1009
+ GR S + + +C +C HT + CY+RFD++F +
Sbjct: 260 NNYTYRGRGRGGRNGQGGRQNSSPSEKPQCQLCGKFGHTAQICYHRFDISFQGGQTTISH 319
Query: 1010 NNNNFQQS*CTINSPSVSVARFGNQVTESPQDIYWYPYSGVTNHLTYDLGNLNLDADYQG 1189
+ NN Q+ N P++ + N P D WY SG ++HLT +LGNL + Y G
Sbjct: 320 SLNNGNQN----NIPAMVASASNN-----PADESWYLDSGASHHLTQNLGNLTSTSPYTG 370
Query: 1190 NERIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVF 1369
+++ +G + IS+ G+ K TH F L + HVP I+ NL+SV++F +NN
Sbjct: 371 TDKVTIGNGKHLSISNIGS---KQLHSHTHSFRLKKVFHVPFISANLISVAKFCSENNAL 427
Query: 1370 FEFHPFLCAVKDLNSGTILLKGTLKDGQYNFSLIN 1474
EFH VKDL++ +L +G L++G Y F + +
Sbjct: 428 IEFHSNAFFVKDLHTKMVLAQGKLENGLYKFPVFS 462
Score = 28.5 bits (62), Expect(3) = 4e-53
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +3
Query: 1569 DVWHYRMGHPSYDIMKRAL 1625
++WH R+GH S+DI+ + +
Sbjct: 489 ELWHNRLGHASFDIVSKVM 507
Score = 28.1 bits (61), Expect(3) = 4e-53
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 117 QLQSQLITTKLNESNYLIWEQQILTTIKGYGLLGYLTG 230
Q+ + + KL+ +NY++W QI I G ++ G
Sbjct: 30 QMLNHTLPVKLDRTNYILWRSQIDNVIFANGFEDFIDG 67
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 200 bits (509), Expect(3) = 5e-53
Identities = 130/394 (32%), Positives = 196/394 (49%), Gaps = 15/394 (3%)
Frame = +2
Query: 326 KQDQLIASWLLSSLSKNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKG 505
+Q QLI S LL+S++ +L V +T+ ++ +L+ FA+ AK Q K +L KKG
Sbjct: 78 QQXQLIMSXLLASITDALLTRMVNCDTSAQVWKTLELYFATQVRAKVTQFKTQLHNTKKG 137
Query: 506 NMKIREYFNKMKTTCDMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVE 685
++ I +Y K++ D+LA+VGH IS D + + EGL DY + ++S+ SR + + E
Sbjct: 138 DLSISDYLLKIRNVVDLLALVGHKISVKDHIBAIFEGLPQDYETFIISVNSRLDPYTVEE 197
Query: 686 AYCVLLSFEARMEAIEGNKSNNDGSQLGANLTTQTQXXXXXXXXXXXXXXXQFQXXXXXX 865
+LL+ E+R+E + K + + A+L T + F+
Sbjct: 198 IEALLLAQESRIE--KNIKIADFSTPSLAHLITTNRNGSPHFNYRASTRNSNFRPPTHSG 255
Query: 866 XXXXXXXXX-------K*GRFSY--NNRARC*ICNYSNHTTEKCYYRFDMNFAPKTQNNN 1018
+ GR S+ NN+ +C +C H +CYYRFD +F +Q
Sbjct: 256 NGMQHFRGNFTQQGRGRHGRGSWKGNNKPQCQLCGRIGHVVMQCYYRFDQSFTGPSQLQG 315
Query: 1019 NFQQS*CTINSPSVSVARFGNQVTESP------QDIYWYPYSGVTNHLTYDLGNLNLDAD 1180
N Q +S F + P QD WYP SG T+HLT +L NL +
Sbjct: 316 NRPQGNMAHLHQQLSEXFFPGTPSVKPTTAEIIQDNNWYPDSGATHHLTPNLNNLLTKSQ 375
Query: 1181 YQGNERIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDN 1360
+ ++ + +G + I H G+ + L LLHVP+ITKNLLSVS+FA DN
Sbjct: 376 FPSSDEVFVGNGKGLPIHHIGHTSFSSSFIPSKTLALKQLLHVPEITKNLLSVSKFAADN 435
Query: 1361 NVFFEFHPFLCAVKDLNSGTILLKGTLKDGQYNF 1462
+VFFEFHP C VKD ++ T+L+ G LK G Y F
Sbjct: 436 HVFFEFHPTSCFVKDPSTRTVLMHGQLKGGLYVF 469
Score = 32.0 bits (71), Expect(3) = 5e-53
Identities = 12/31 (38%), Positives = 24/31 (77%)
Frame = +3
Query: 135 ITTKLNESNYLIWEQQILTTIKGYGLLGYLT 227
+++KL+ N+L+ +QILTT++G+ L +L+
Sbjct: 19 VSSKLDNHNFLVXRKQILTTLRGHKLQHFLS 49
Score = 25.4 bits (54), Expect(3) = 5e-53
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 1572 VWHYRMGHPSYDIMKRAL 1625
+WH R+GHPS I+ L
Sbjct: 506 LWHNRLGHPSSHIVSLVL 523
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 196 bits (498), Expect(3) = 5e-51
Identities = 131/397 (32%), Positives = 197/397 (49%), Gaps = 2/397 (0%)
Frame = +2
Query: 332 DQLIASWLLSSLSKNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKGNM 511
D++I SW+ SSL+ I+ VG+ ++ +L+ F + S A+ MQL+LE QT +KG++
Sbjct: 153 DRMILSWIYSSLTPEIMGQIVGYQSSHAXWFALEXXFXASSRARVMQLRLEFQTTRKGSL 212
Query: 512 KIREYFNKMKTTCDMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVEAY 691
+ EY K+K+ D LA +G +++ DQ+L LL GLG DYNS+V SLT+R ++ N V
Sbjct: 213 TMMEYILKLKSLADNLAAIGEPVTDRDQILQLLGGLGADYNSIVASLTAREDEDNSVAED 272
Query: 692 CVLLSFEA--RMEAIEGNKSNNDGSQLGANLTTQTQXXXXXXXXXXXXXXXQFQXXXXXX 865
V+ + A + + +S+ Q G N T
Sbjct: 273 NVISANLATPQYQHFNNKRSSGQNRQSGFNTRRGTNGGRSQ------------------- 313
Query: 866 XXXXXXXXXK*GRFSYNNRARC*ICNYSNHTTEKCYYRFDMNFAPKTQNNNNFQQS*CTI 1045
S +R +C +C HT +CY+RFD+NF N + Q +
Sbjct: 314 --------------SSQHRPQCQLCGKFGHTVVRCYHRFDINFQGYNPNMDTVQTN--KP 357
Query: 1046 NSPSVSVARFGNQVTESPQDIYWYPYSGVTNHLTYDLGNLNLDADYQGNERIQTASGASM 1225
N+ + A + T S D W+ +G T+HL+ + L+ Y GN+++ +G +
Sbjct: 358 NAKNQVQAMMASPSTIS--DEAWFFDTGATHHLSQSIDPLSDVQPYMGNDKVIVGNGKHL 415
Query: 1226 IISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFEFHPFLCAVKD 1405
I H G P S+ F L +LHVP I NL+SVSQF DNN FFEFHP VKD
Sbjct: 416 RILHTGTTFF---PSSSKTFQLRQVLHVPDIATNLISVSQFCADNNTFFEFHPRFFFVKD 472
Query: 1406 LNSGTILLKGTLKDGQYNFSLINVNNTTSITFVSTCY 1516
+ ILL+G+L+ G Y F V + + FVS+ Y
Sbjct: 473 QVTKKILLQGSLEHGLYRFPARFVPSPAA--FVSSSY 507
Score = 27.3 bits (59), Expect(3) = 5e-51
Identities = 10/46 (21%), Positives = 23/46 (50%)
Frame = +3
Query: 93 TTMTNHVIQLQSQLITTKLNESNYLIWEQQILTTIKGYGLLGYLTG 230
+T +Q+ + + KL+ +NY++W Q+ + G ++ G
Sbjct: 83 STGATQTMQMLNHALPIKLDRNNYILWRTQMENVVFANGFEDHIEG 128
Score = 27.3 bits (59), Expect(3) = 5e-51
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 1572 VWHYRMGHPSYDIMKRAL 1625
+WH R+GHP+ +I+K L
Sbjct: 521 LWHSRLGHPADNILKHIL 538
>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 200 bits (509), Expect(2) = 3e-50
Identities = 126/392 (32%), Positives = 198/392 (50%), Gaps = 2/392 (0%)
Frame = +2
Query: 326 KQDQLIASWLLSSLSKNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKG 505
+QD+ I SW+ SSL+ I+ +G N++ ++L+ F+S S A+ MQL+LE Q+ KKG
Sbjct: 87 RQDRTILSWIYSSLTPGIMAQIIGHNSSHSAWNALEKIFSSCSRARIMQLRLEFQSTKKG 146
Query: 506 NMKIREYFNKMKTTCDMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVE 685
+M + +Y K+K D LA +G +SE DQ++ LL GLG DYN++V ++ R +K ++
Sbjct: 147 SMSMIDYIMKVKGAADSLAAIGEPVSEQDQIMNLLGGLGSDYNAVVTAINIREDKISLEA 206
Query: 686 AYCVLLSFEARMEAIEGNKSNNDGSQLGANLTTQTQXXXXXXXXXXXXXXXQFQXXXXXX 865
+ +LL+FE R+E S + AN + +
Sbjct: 207 VHSMLLAFEQRLEQ---QGSIEQLPAMSANYASSSNNRGGGRKYNGGRGPNFMMTNSNFR 263
Query: 866 XXXXXXXXXK*GR--FSYNNRARC*ICNYSNHTTEKCYYRFDMNFAPKTQNNNNFQQS*C 1039
+ GR S + R +C +C HT + CY+RFD+ F TQNN +
Sbjct: 264 GRGRGGRYGQSGRQNSSSSERPQCQLCGKFGHTVQVCYHRFDITFQ-STQNNTTGVSNSG 322
Query: 1040 TINSPSVSVARFGNQVTESPQDIYWYPYSGVTNHLTYDLGNLNLDADYQGNERIQTASGA 1219
NS VA N ++ WY SG ++HLT ++ NL Y G +++ +G
Sbjct: 323 NSNSMPAMVASSNNLADDN-----WYLDSGASHHLTQNVANLTNATPYTGADKVTIGNGK 377
Query: 1220 SMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFEFHPFLCAV 1399
+ IS+ G + P H F L + HVP I+ NL+SV++F DNN EFH V
Sbjct: 378 HLTISNTGFTRLFSNP---HSFQLKKVFHVPFISANLISVAKFCSDNNALIEFHSNGFFV 434
Query: 1400 KDLNSGTILLKGTLKDGQYNFSLINVNNTTSI 1495
KDL++ +L +G L++G Y F +I+ T +
Sbjct: 435 KDLHTKRVLAQGKLENGLYKFPVISNRKTAYV 466
Score = 27.3 bits (59), Expect(2) = 3e-50
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 117 QLQSQLITTKLNESNYLIWEQQILTTIKGYGLLGYLTG 230
Q+ + + KL+ +NY++W QI I G ++ G
Sbjct: 27 QMLNYSLPVKLDRTNYILWRSQIDNVIFANGFEDFIDG 64
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 193 bits (491), Expect(3) = 3e-50
Identities = 124/392 (31%), Positives = 196/392 (50%), Gaps = 2/392 (0%)
Frame = +2
Query: 326 KQDQLIASWLLSSLSKNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKG 505
+QD+ I SW+ SSL+ I+ +G N++ ++L+ F+S S A+ MQL LE Q+ KKG
Sbjct: 87 RQDRTILSWIYSSLTPGIMAQIIGHNSSHSAWNALEKIFSSCSRARIMQLXLEFQSTKKG 146
Query: 506 NMKIREYFNKMKTTCDMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVE 685
+M + +Y K+K D LA +G +SE DQ++ LL GLG DYN++V ++ R +K ++
Sbjct: 147 SMSMIDYIMKVKGAADSLAAIGEPVSEQDQIMNLLGGLGSDYNAVVTAINIREDKISLEA 206
Query: 686 AYCVLLSFEARMEAIEGNKSNNDGSQLGANLTTQTQXXXXXXXXXXXXXXXQFQXXXXXX 865
+ +LL+FE R+E S + AN + +
Sbjct: 207 VHSMLLAFEQRLEQ---QGSIEQLPAMSANYASXSNNRGGGRKYNGGRGPNFMMTNSNFR 263
Query: 866 XXXXXXXXXK*GR--FSYNNRARC*ICNYSNHTTEKCYYRFDMNFAPKTQNNNNFQQS*C 1039
+ GR S + R +C +C HT + CY+RFD+ F TQNN +
Sbjct: 264 GRGRGXRYGQSGRQNSSSSERPQCQLCGKFGHTVQVCYHRFDITFQ-STQNNTTGVSNSG 322
Query: 1040 TINSPSVSVARFGNQVTESPQDIYWYPYSGVTNHLTYDLGNLNLDADYQGNERIQTASGA 1219
N VA N ++ WY SG ++HLT ++ NL Y G +++ +G
Sbjct: 323 NSNXMPAMVAXSNNXADDN-----WYLDSGASHHLTQNVANLTNATPYTGADKVTIGNGK 377
Query: 1220 SMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFEFHPFLCAV 1399
+ IS+ + P H F L + HVP I+ NL+SV++F DNN EFH +
Sbjct: 378 HLTISNTXFTRLFSNP---HSFQLKKVFHVPFISANLISVAKFCSDNNALIEFHSNGFFL 434
Query: 1400 KDLNSGTILLKGTLKDGQYNFSLINVNNTTSI 1495
KDL++ +L +G L++G Y F +I+ T +
Sbjct: 435 KDLHTKRVLAQGKLENGLYKFPVISNKKTAYV 466
Score = 27.3 bits (59), Expect(3) = 3e-50
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 117 QLQSQLITTKLNESNYLIWEQQILTTIKGYGLLGYLTG 230
Q+ + + KL+ +NY++W QI I G ++ G
Sbjct: 27 QMLNYSLPVKLDRTNYILWRSQIDNVIFANGFEDFIDG 64
Score = 27.3 bits (59), Expect(3) = 3e-50
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +3
Query: 1569 DVWHYRMGHPSYDIMKRAL 1625
++WH+R+GH + DI+ R +
Sbjct: 484 ELWHHRLGHAATDIVTRIM 502
>emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]
Length = 2220
Score = 194 bits (494), Expect(2) = 4e-50
Identities = 122/400 (30%), Positives = 206/400 (51%), Gaps = 8/400 (2%)
Frame = +2
Query: 326 KQDQLIASWLLSSLSKNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKG 505
+QD+ I SWL SSL+ I+ +G N++ ++L+ F+S S A+ MQL+LELQ+ KKG
Sbjct: 932 RQDRTILSWLYSSLTPAIMAQIIGHNSSHSAWNALEKTFSSSSRARIMQLRLELQSTKKG 991
Query: 506 NMKIREYFNKMKTTCDMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVE 685
++ + +Y K+K D LA +G +SE DQV+ LL GLG DYN++V ++ R +K ++
Sbjct: 992 SLSMIDYIMKVKGAADSLAAIGEPVSEQDQVMNLLGGLGSDYNAVVTAINIRDDKISIEA 1051
Query: 686 AYCVLLSFEARMEAIEGNKSNNDGSQLGANLTTQTQXXXXXXXXXXXXXXXQFQXXXXXX 865
+ +LL+FE R+E S S + AN + + + Q
Sbjct: 1052 VHSMLLAFEHRLEQ---QSSIKQFSPISANYASSSN----NRGGGRRYNGGRGQNHTPNI 1104
Query: 866 XXXXXXXXXK*GRFSYNNR--------ARC*ICNYSNHTTEKCYYRFDMNFAPKTQNNNN 1021
+ GR+ N R +C +C HT + CY+RFD+++ +Q++N
Sbjct: 1105 SNYTYRGCGRGGRYGQNGRHNSNSSEKPQCQLCGKFGHTVQICYHRFDISY-QSSQSSNT 1163
Query: 1022 FQQS*CTINSPSVSVARFGNQVTESPQDIYWYPYSGVTNHLTYDLGNLNLDADYQGNERI 1201
+ NS VA N ++ WY SG ++HLT +GNL + Y G +++
Sbjct: 1164 SPSNAGNPNSIPAMVASSNNLADDT-----WYLDSGASHHLTQSVGNLTSSSPYTGIDKV 1218
Query: 1202 QTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFEFH 1381
+G + IS+ G+ + + F + + HVP I+ NL+SV++F +NN EF
Sbjct: 1219 TIGNGKHLSISNTGSHCLL---SDSRYFHVKKVFHVPFISSNLISVAKFCSNNNALIEFR 1275
Query: 1382 PFLCAVKDLNSGTILLKGTLKDGQYNFSLINVNNTTSITF 1501
VKDL++ +L +G L++ Y F ++N + +++F
Sbjct: 1276 SNSFFVKDLHTKKVLAQGKLENRLYRFPVLNSKKSCNVSF 1315
Score = 32.3 bits (72), Expect(2) = 4e-50
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 72 SINKQVVTTMTNHV-IQLQSQLITTKLNESNYLIWEQQILTTIKGYGLLGYLTG 230
SI TTM +H Q+ + + KL+ +NY++W+ QI + G ++ G
Sbjct: 856 SIGSGQSTTMASHPSYQMLNHTLLVKLDRTNYILWKSQIDNVVFANGFEDFIDG 909
>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
Length = 1334
Score = 186 bits (473), Expect(3) = 1e-49
Identities = 129/396 (32%), Positives = 191/396 (48%), Gaps = 18/396 (4%)
Frame = +2
Query: 332 DQLIASWLLSSLSKNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKGNM 511
D+++ SW+ S+L+ +I+ VGF T+ E +L F++ S A+ MQL+LE QT KKG
Sbjct: 86 DRMVLSWMYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKKGGD 145
Query: 512 KIREYFNKMKTTCDMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVEAY 691
+ +Y KMKT D LA VG + E D +L LL GLG DYNS+V SLT+R + ++ +
Sbjct: 146 AMLDYILKMKTISDNLAAVGEPVKERDHILQLLGGLGPDYNSIVASLTAREDDLSLHSVH 205
Query: 692 CVLLSFEARMEAIEGNKSNNDGSQLGANLTT----------------QTQXXXXXXXXXX 823
+LL+ E R+ + S D S A++ +
Sbjct: 206 SILLTHEQRLHL--QHSSPTDPSFASAHMASXPSRQPNRPHQPRHYHHPSRPQHQASSSS 263
Query: 824 XXXXXQFQXXXXXXXXXXXXXXXK*GRFSYNNRARC*ICNYSNHTTEKCYYRFDMNFAPK 1003
+F K S R +C +C HT KCY+RFD+N+
Sbjct: 264 NRPPTRFHPQQPRNNHPIPSAHNKPHHLS--TRPQCQLCGKFGHTAIKCYHRFDINY--- 318
Query: 1004 TQNNNNFQQS*CTINSPSVSVARFGNQVTESPQDIY--WYPYSGVTNHLTYDLGNLNLDA 1177
Q NN ++ A F + + + D W+ +G T+HL++ L+
Sbjct: 319 -QGNNGVP----------LAQAPFSHAMXAAAPDHQDSWFFDTGATHHLSHSAQTLSCVQ 367
Query: 1178 DYQGNERIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKD 1357
Y G +++ G S+ I + G +P + F LN +LHVP ++ NL+SVS+F D
Sbjct: 368 PYSGTDQVTIGDGNSLPILNTGTKSFFFPSKT---FSLNQVLHVPHLSTNLISVSKFCTD 424
Query: 1358 NNVFFEFHPFLCAVKDLNSGTILLKGTLKDGQYNFS 1465
N VFFEFH VKD + ILLKG L+DG Y FS
Sbjct: 425 NAVFFEFHSSCFFVKDQVTKKILLKGWLRDGLYEFS 460
Score = 31.6 bits (70), Expect(3) = 1e-49
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 1542 VELGSKLDLDVWHYRMGHPSYDIMKRAL 1625
V GS D +WH R+GHP+ I+ +AL
Sbjct: 469 VTTGSFSDGAIWHSRLGHPAVPILSKAL 496
Score = 28.5 bits (62), Expect(3) = 1e-49
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 72 SINKQVVTTMTNHVIQLQS--QLITTKLNESNYLIWEQQILTTIKGYGLLGYLTGEQA 239
S Q+ ++ ++ + L S + KL+ SNY++W+ Q+ + G Y+ G ++
Sbjct: 7 SSEHQLPSSSNHNSVSLLSLNHALPIKLDRSNYILWKTQMENVVYANGFEDYIEGTKS 64
>emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]
Length = 1272
Score = 184 bits (467), Expect(3) = 5e-49
Identities = 127/394 (32%), Positives = 190/394 (48%), Gaps = 16/394 (4%)
Frame = +2
Query: 332 DQLIASWLLSSLSKNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKGNM 511
D+++ SW+ S+L+ +I+ VGF T+ E +L F++ S A+ MQL+LE QT KKG
Sbjct: 86 DRMVLSWMYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKKGGD 145
Query: 512 KIREYFNKMKTTCDMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVEAY 691
+ +Y KMKT D LA G + + D +L LL GLG DYNS+V SLT+R + ++ +
Sbjct: 146 SMLDYILKMKTISDNLAAXGEPVKDRDHILQLLGGLGPDYNSIVASLTAREDDLSLHSVH 205
Query: 692 CVLLSFEARMEAIEGNKSNNDGSQLGANLTT----------------QTQXXXXXXXXXX 823
+LL+ E R+ + S D S A++ + +
Sbjct: 206 SILLTHEQRLHL--QHSSPTDPSFASAHMASVPSRQPNRPHQPRHYNHSSRPQHQVSSSS 263
Query: 824 XXXXXQFQXXXXXXXXXXXXXXXK*GRFSYNNRARC*ICNYSNHTTEKCYYRFDMNFAPK 1003
+F K S R +C +C HT KCY+RFD+N+
Sbjct: 264 NRPPTRFHPQQPRNNHPIHSAHNKPHHLS--TRPQCQLCGKFGHTAIKCYHRFDINY--- 318
Query: 1004 TQNNNNFQQS*CTINSPSVSVARFGNQVTESPQDIYWYPYSGVTNHLTYDLGNLNLDADY 1183
Q NN + + ++ A QD W+ +G T+HL++ L+ Y
Sbjct: 319 -QGNNGVPLAQAPFSHAMLAAA-------PDHQDS-WFFDTGATHHLSHXAQTLSCVQPY 369
Query: 1184 QGNERIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNN 1363
G +++ G S+ I + G +P + F LN +LHVP ++ NL+SVS+F DN
Sbjct: 370 SGTDQVTIGDGNSLPILNTGTKSFFFPSKT---FSLNQVLHVPHLSTNLISVSKFCTDNA 426
Query: 1364 VFFEFHPFLCAVKDLNSGTILLKGTLKDGQYNFS 1465
VFFEFH VKD + ILLKG L+DG Y FS
Sbjct: 427 VFFEFHSSYFFVKDQVTKKILLKGWLRDGLYEFS 460
Score = 31.6 bits (70), Expect(3) = 5e-49
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 1542 VELGSKLDLDVWHYRMGHPSYDIMKRAL 1625
V GS D +WH R+GHP+ I+ +AL
Sbjct: 469 VTTGSFSDGAIWHSRLGHPAVPILSKAL 496
Score = 28.5 bits (62), Expect(3) = 5e-49
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 72 SINKQVVTTMTNHVIQLQS--QLITTKLNESNYLIWEQQILTTIKGYGLLGYLTGEQA 239
S Q+ ++ ++ + L S + KL+ SNY++W+ Q+ + G Y+ G ++
Sbjct: 7 SSEHQLSSSSNHNSVSLLSLNHALPIKLDRSNYILWKTQMENVVYANGFEDYIEGTKS 64
>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
Length = 1434
Score = 183 bits (465), Expect(3) = 8e-49
Identities = 128/394 (32%), Positives = 189/394 (47%), Gaps = 16/394 (4%)
Frame = +2
Query: 332 DQLIASWLLSSLSKNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKGNM 511
D+++ SW+ S+L+ +I+ VGF T+ E +L F++ S A+ MQL+LE QT KKG
Sbjct: 86 DRMVLSWMYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKKGGD 145
Query: 512 KIREYFNKMKTTCDMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVEAY 691
+ +Y KMKT D LA VG + E D +L LL GLG DYNS+V SLT+R + ++ +
Sbjct: 146 AMLDYILKMKTISDNLAAVGEPVKERDHILQLLGGLGPDYNSIVASLTAREDDLSLHSVH 205
Query: 692 CVLLSFEARMEAIEGNKSNNDGSQLGANLTT----------------QTQXXXXXXXXXX 823
+LL+ E R+ + S D S A++ +
Sbjct: 206 SILLTHEQRLHL--QHSSPTDPSFASAHMASVPSRQPNRPHQPRHYHHPSRPQHQASSSS 263
Query: 824 XXXXXQFQXXXXXXXXXXXXXXXK*GRFSYNNRARC*ICNYSNHTTEKCYYRFDMNFAPK 1003
+F K S R +C +C HT KCY+RFD+N+
Sbjct: 264 NRPPTRFHPQQPRNNHPIPSAHNKPHHLS--TRPQCQLCGKFGHTAIKCYHRFDINY--- 318
Query: 1004 TQNNNNFQQS*CTINSPSVSVARFGNQVTESPQDIYWYPYSGVTNHLTYDLGNLNLDADY 1183
Q NN + + ++ A QD W+ +G T+HL++ L+ Y
Sbjct: 319 -QGNNGVPLAQAPFSHAMLAAA-------PDHQD-SWFFDTGATHHLSHSAQTLSCVQPY 369
Query: 1184 QGNERIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNN 1363
G +++ G S+ I + G +P + F LN +LHVP ++ NL+SVS+F DN
Sbjct: 370 SGTDQVTIGDGNSLPILNTGTKSFFFP---SKTFSLNQVLHVPHLSTNLISVSKFXTDNA 426
Query: 1364 VFFEFHPFLCAVKDLNSGTILLKGTLKDGQYNFS 1465
VFFE H VKD + ILLKG L+DG Y FS
Sbjct: 427 VFFEXHSSCFFVKDQVTKKILLKGWLRDGLYEFS 460
Score = 31.6 bits (70), Expect(3) = 8e-49
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 1542 VELGSKLDLDVWHYRMGHPSYDIMKRAL 1625
V GS D +WH R+GHP+ I+ +AL
Sbjct: 469 VTTGSFSDGAIWHSRLGHPAVPILSKAL 496
Score = 28.5 bits (62), Expect(3) = 8e-49
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 72 SINKQVVTTMTNHVIQLQS--QLITTKLNESNYLIWEQQILTTIKGYGLLGYLTGEQA 239
S Q+ ++ ++ + L S + KL+ SNY++W+ Q+ + G Y+ G ++
Sbjct: 7 SSEHQLPSSSNHNSVSLLSLNHALPIKLDRSNYILWKTQMENVVYANGFEDYIEGTKS 64
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 169 bits (428), Expect(3) = 9e-48
Identities = 112/375 (29%), Positives = 176/375 (46%)
Frame = +2
Query: 332 DQLIASWLLSSLSKNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKGNM 511
DQL+ +LLSSLS+++L+ TA E S++ +++ + A+ + +L L KKG M
Sbjct: 84 DQLVLGYLLSSLSRDVLIQVATCKTAAEAWRSIEALYSTGTRARAVNTRLALTNTKKGTM 143
Query: 512 KIREYFNKMKTTCDMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVEAY 691
KI EY KM+ D +A GH + E D V Y++ GL D++ +V +L ++++ + E Y
Sbjct: 144 KIAEYVAKMRALGDEMAAGGHPLDEEDLVQYIIAGLNEDFSPIVSNLCNKSDPITVGELY 203
Query: 692 CVLLSFEARMEAIEGNKSNNDGSQLGANLTTQTQXXXXXXXXXXXXXXXQFQXXXXXXXX 871
L++FE ++ + G+ AN +
Sbjct: 204 SQLVNFETLLDLYRS--TGQGGAAFVANRGRGGGGGGRGNNNNSGGGGGRSAPGGRGSGS 261
Query: 872 XXXXXXXK*GRFSYNNRARC*ICNYSNHTTEKCYYRFDMNFAPKTQNNNNFQQS*CTINS 1051
+ G + R C +C HT C+YRFD ++ +
Sbjct: 262 QGRGGRGR-GTGGQDRRPTCQVCFKRGHTAADCWYRFDEDYVA---------------DE 305
Query: 1052 PSVSVARFGNQVTESPQDIYWYPYSGVTNHLTYDLGNLNLDADYQGNERIQTASGASMII 1231
V+ A + D WY +G T+H+T +L L Y G E+I TASGA M I
Sbjct: 306 KLVAAATNSYGI-----DTNWYIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDI 360
Query: 1232 SHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFEFHPFLCAVKDLN 1411
SH G+ ++ P + H LNN+L+VPQ KNL+S SQ A DN+ F E H ++KD
Sbjct: 361 SHIGHTIVHTPSRNIH---LNNVLYVPQAKKNLISASQLAADNSAFLELHSKFFSIKDQV 417
Query: 1412 SGTILLKGTLKDGQY 1456
+ +LL+G + G Y
Sbjct: 418 TRDVLLEGKCRHGLY 432
Score = 38.1 bits (87), Expect(3) = 9e-48
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 120 LQSQLITTKLNESNYLIWEQQILTTIKGYGLLGYLTGE 233
LQ ++ KL ++N+ +W+ Q+ ++G LLGYL G+
Sbjct: 16 LQGHSVSEKLGKANHALWKAQVSAAVRGARLLGYLNGD 53
Score = 32.7 bits (73), Expect(3) = 9e-48
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 1521 FQSNCNVVELGS-KLDLDVWHYRMGHPSYDIMKRAL 1625
F + N LG+ KL L WH R+GHPS I+K+ +
Sbjct: 438 FGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVI 473
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 176 bits (446), Expect(3) = 2e-47
Identities = 114/385 (29%), Positives = 182/385 (47%), Gaps = 9/385 (2%)
Frame = +2
Query: 329 QDQLIASWLLSSLSKNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKGN 508
+DQ + +LLSSLS+ +L + V +T+ + +L ++SHS A+++ ++ L T KKG
Sbjct: 81 RDQAVLGYLLSSLSREVLSSVVNCSTSASVWTTLSEMYSSHSRARKVNTRIALATTKKGA 140
Query: 509 MKIREYFNKMKTTCDMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVEA 688
+ EYF KM+ D L G + + + V +LL GL D+N LV ++ +R++ +
Sbjct: 141 SSVAEYFAKMRGFADELGAAGKPLDDEEFVSFLLTGLDEDFNPLVTAVVARSDPITPGDL 200
Query: 689 YCVLLSFEARMEAIEGNKSNNDGSQLGANLTTQTQXXXXXXXXXXXXXXXQFQXXXXXXX 868
Y LLS+E RM G+ S S AN + + F
Sbjct: 201 YTQLLSYENRMHLQTGSSSLMQSS---ANARSPGRGMSWGRSGGRG-----FSRGRGRGR 252
Query: 869 XXXXXXXXK*GRFSY---------NNRARC*ICNYSNHTTEKCYYRFDMNFAPKTQNNNN 1021
GR + ++R RC +C+ HT C+YRFD N+ P ++ N+
Sbjct: 253 GPSRGGFQSFGRGNNYSGATDADTSSRPRCQVCSRVGHTALNCWYRFDENYVPDQRSANS 312
Query: 1022 FQQS*CTINSPSVSVARFGNQVTESPQDIYWYPYSGVTNHLTYDLGNLNLDADYQGNERI 1201
++ ++ WY +G T+H+T DL L + Y G ++I
Sbjct: 313 AAH--------------------QNGSNVPWYTDTGATDHITGDLDRLTMHDKYTGTDQI 352
Query: 1202 QTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFEFH 1381
A+G M IS+ GN ++ P S+ L ++LHVP KNL+SV + DN+VF EFH
Sbjct: 353 IAANGTGMTISNIGNAIV---PTSSRSLHLRSVLHVPSTHKNLISVHRLTNDNDVFIEFH 409
Query: 1382 PFLCAVKDLNSGTILLKGTLKDGQY 1456
+KD + +LL G +DG Y
Sbjct: 410 SSHFLIKDRQTKAVLLHGKCRDGLY 434
Score = 31.6 bits (70), Expect(3) = 2e-47
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 1554 SKLDLDVWHYRMGHPSYDIMKRAL 1625
+++ L+ WH R+GHPS DI+ R +
Sbjct: 451 TRVPLEHWHKRLGHPSRDIVHRVI 474
Score = 31.2 bits (69), Expect(3) = 2e-47
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 135 ITTKLNESNYLIWEQQILTTIKGYGLLGYLTG 230
++ KL + NYL+W+ Q+L I+ L LTG
Sbjct: 20 VSEKLTKGNYLLWKAQVLPAIRAAQLDDILTG 51
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 166 bits (419), Expect(3) = 2e-46
Identities = 113/398 (28%), Positives = 176/398 (44%), Gaps = 23/398 (5%)
Frame = +2
Query: 332 DQLIASWLLSSLSKNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKGNM 511
DQL+ +LLSSLS+++L+ TA E +++ +++ + A+ + +L L KKG M
Sbjct: 84 DQLVLGYLLSSLSRDVLIQVATCKTAAEAWRNIEALYSTGTRARAVNTRLALTNTKKGTM 143
Query: 512 KIREYFNKMKTTCDMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVEAY 691
KI EY KM+ CD +A G + E V Y++ GL D++ +V +L ++++ + E Y
Sbjct: 144 KIAEYVAKMRALCDEMAAGGRPLDEEGLVQYIIAGLNEDFSPIVSNLCNKSDPITVGELY 203
Query: 692 CVLLSFEARMEAIE-----------------------GNKSNNDGSQLGANLTTQTQXXX 802
L++FE ++ GN +N+DG G
Sbjct: 204 SQLVNFETLLDLYRSTGQGGAAFVANRGRGGGGGGGRGNNNNSDGGGGGGGRGAPRGRGG 263
Query: 803 XXXXXXXXXXXXQFQXXXXXXXXXXXXXXXK*GRFSYNNRARC*ICNYSNHTTEKCYYRF 982
G + R C +C HT C+YRF
Sbjct: 264 GGQGRGGHGR----------------------GTGGQDRRPTCQVCFKRGHTAADCWYRF 301
Query: 983 DMNFAPKTQNNNNFQQS*CTINSPSVSVARFGNQVTESPQDIYWYPYSGVTNHLTYDLGN 1162
D ++ + V+ A + D WY +G T+H+T +L
Sbjct: 302 DEDYVA---------------DEKLVAAATNSYGI-----DTNWYIDTGATDHITGELEK 341
Query: 1163 LNLDADYQGNERIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVS 1342
L Y G E+I TASGA M ISH G+ ++ P + H LNN+L+VPQ KNL+S S
Sbjct: 342 LTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIH---LNNVLYVPQAKKNLISAS 398
Query: 1343 QFAKDNNVFFEFHPFLCAVKDLNSGTILLKGTLKDGQY 1456
Q A DN+ F E H ++KD + +LL+G + G Y
Sbjct: 399 QLAADNSAFLELHSKFFSIKDQVTRDVLLEGKCRHGLY 436
Score = 37.0 bits (84), Expect(3) = 2e-46
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 120 LQSQLITTKLNESNYLIWEQQILTTIKGYGLLGYLTGE 233
LQ ++ KL ++N+ +W+ Q+ + G LLGYL G+
Sbjct: 16 LQGHSVSEKLGKANHALWKAQVSAAVHGARLLGYLNGD 53
Score = 32.7 bits (73), Expect(3) = 2e-46
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 1521 FQSNCNVVELGS-KLDLDVWHYRMGHPSYDIMKRAL 1625
F + N LG+ KL L WH R+GHPS I+K+ +
Sbjct: 442 FGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVI 477
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 161 bits (408), Expect(3) = 4e-45
Identities = 112/398 (28%), Positives = 174/398 (43%), Gaps = 23/398 (5%)
Frame = +2
Query: 332 DQLIASWLLSSLSKNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKGNM 511
DQL+ +LLSSLS+++L+ TA E +++ +++ + A+ + +L L KKG M
Sbjct: 84 DQLVLGYLLSSLSRDVLIQVATCKTAAEAWRNIEALYSTGTRARAVNTRLALTNTKKGTM 143
Query: 512 KIREYFNKMKTTCDMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVEAY 691
KI EY KM+ CD +A G + E V Y++ GL D++ +V + +++ + E Y
Sbjct: 144 KIAEYVAKMRALCDEMAAGGRPLDEEGLVQYIIAGLTEDFSPIVSNPCNKSNPITVGELY 203
Query: 692 CVLLSFEARMEAIE-----------------------GNKSNNDGSQLGANLTTQTQXXX 802
L++FE ++ GN +N+DG G
Sbjct: 204 SQLVNFETLLDLYRSTGQGGAAFVANRGRGGGGGGGRGNNNNSDGGGGGGGRGAPRGRGG 263
Query: 803 XXXXXXXXXXXXQFQXXXXXXXXXXXXXXXK*GRFSYNNRARC*ICNYSNHTTEKCYYRF 982
G + R C +C HT C+YRF
Sbjct: 264 GGQGRGGHGR----------------------GTGGQDRRPTCQVCFKRGHTAADCWYRF 301
Query: 983 DMNFAPKTQNNNNFQQS*CTINSPSVSVARFGNQVTESPQDIYWYPYSGVTNHLTYDLGN 1162
D ++ + V+ A + D WY +G T+H+T +L
Sbjct: 302 DEDYVA---------------DEKLVAAATNSYGI-----DTNWYIDTGATDHITGELEK 341
Query: 1163 LNLDADYQGNERIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVS 1342
L Y G E+I TASGA M ISH G+ ++ P + H LNN+L+VPQ KNL+S S
Sbjct: 342 LTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIH---LNNVLYVPQAKKNLISAS 398
Query: 1343 QFAKDNNVFFEFHPFLCAVKDLNSGTILLKGTLKDGQY 1456
Q A DN+ F E H ++KD + +LL+G + G Y
Sbjct: 399 QLAADNSAFLELHSKFFSIKDQVTRDVLLEGKCRHGLY 436
Score = 37.0 bits (84), Expect(3) = 4e-45
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 120 LQSQLITTKLNESNYLIWEQQILTTIKGYGLLGYLTGE 233
LQ ++ KL ++N+ +W+ Q+ + G LLGYL G+
Sbjct: 16 LQGHSVSEKLGKANHALWKAQVSAAVHGARLLGYLNGD 53
Score = 32.7 bits (73), Expect(3) = 4e-45
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 1521 FQSNCNVVELGS-KLDLDVWHYRMGHPSYDIMKRAL 1625
F + N LG+ KL L WH R+GHPS I+K+ +
Sbjct: 442 FGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVI 477
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 158 bits (400), Expect(3) = 1e-44
Identities = 105/380 (27%), Positives = 169/380 (44%), Gaps = 5/380 (1%)
Frame = +2
Query: 332 DQLIASWLLSSLSKNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKGNM 511
DQ + ++LLSS++K++LV TA ++ F S + A+ + +L L TL+KG+M
Sbjct: 81 DQQVLAYLLSSMTKDLLVQVATCRTAASAWSMIQGMFGSMTRARTINTRLSLSTLQKGDM 140
Query: 512 KIREYFNKMKTTCDMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVEAY 691
I Y KM+ D L VG + +++ + Y+ GL ++ ++ ++ R + + E Y
Sbjct: 141 NITTYVGKMRALADDLMAVGKPVDDDELIGYIFAGLDDEFEPVISTIVGRPDPVTIGETY 200
Query: 692 CVLLSFEARMEAIEGNKSNNDGSQLGANLTTQTQXXXXXXXXXXXXXXXQFQXXXXXXXX 871
L+SFE R+ G Q N ++++ + +
Sbjct: 201 AQLISFEQRLA------HRRSGDQSSVNSASRSRGQPQRGGSRSGGDSNRGRGAPSNGAN 254
Query: 872 XXXXXXXK*GRFSY-----NNRARC*ICNYSNHTTEKCYYRFDMNFAPKTQNNNNFQQS* 1036
G + +NR +C +C HT C+YR+D NF P
Sbjct: 255 RGRGRGNPSGGRANVGGGTDNRPKCQLCYKRGHTVCDCWYRYDENFVPDE---------- 304
Query: 1037 CTINSPSVSVARFGNQVTESPQDIYWYPYSGVTNHLTYDLGNLNLDADYQGNERIQTASG 1216
RF D WY +G T+H+T +L L + Y GN+++ TASG
Sbjct: 305 -----------RFAGTAVSYGVDTNWYLDTGATDHVTGELDKLTVRDKYHGNDQVHTASG 353
Query: 1217 ASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFEFHPFLCA 1396
A M ISH GN ++K P + H L ++L+VP+ KNL+S + DN F E +
Sbjct: 354 AGMEISHIGNSVVKTPSRNLH---LKDVLYVPKANKNLVSAYKLTSDNLAFIELYRKFFF 410
Query: 1397 VKDLNSGTILLKGTLKDGQY 1456
+KDL LL+G G Y
Sbjct: 411 IKDLAMRRTLLRGRCHKGLY 430
Score = 40.8 bits (94), Expect(3) = 1e-44
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +3
Query: 120 LQSQLITTKLNESNYLIWEQQILTTIKGYGLLGYLTGE 233
L Q ++ KL +SN+ +W+ QIL TI+G L G+LTG+
Sbjct: 13 LVGQPVSEKLGKSNHAVWKAQILATIRGARLEGHLTGD 50
Score = 30.4 bits (67), Expect(3) = 1e-44
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +3
Query: 1554 SKLDLDVWHYRMGHPSYDIMKRALQ 1628
+K + WH R+GHPSY ++++ ++
Sbjct: 449 TKPSFERWHSRLGHPSYTVVEKVIK 473
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 163 bits (413), Expect(3) = 2e-44
Identities = 112/387 (28%), Positives = 176/387 (45%), Gaps = 12/387 (3%)
Frame = +2
Query: 332 DQLIASWLLSSLSKNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKGNM 511
DQL+ +LLSSLS+++L+ TA E +++ +++ + A+ + +L L KKG M
Sbjct: 83 DQLVLGYLLSSLSRDVLIQVATCKTAAEAWRAIEGLYSTGTRARAVNTRLALTNTKKGTM 142
Query: 512 KIREYFNKMKTTCDMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVEAY 691
KI EY KM+ D +A G + E D V Y++ GL D++ +V +L ++++ + E Y
Sbjct: 143 KIAEYVAKMRALGDEMAAGGRPLDEEDLVQYIIAGLNEDFSPIVSNLCNKSDPITVGELY 202
Query: 692 CVLLSFEARMEAIEGN------------KSNNDGSQLGANLTTQTQXXXXXXXXXXXXXX 835
L++FE ++ + G + G N +
Sbjct: 203 SQLVNFETLLDLYRSTSQGGAAFVANRGRGGGGGGRGGNNNGGHSSNGSGGRGAPRGRSG 262
Query: 836 XQFQXXXXXXXXXXXXXXXK*GRFSYNNRARC*ICNYSNHTTEKCYYRFDMNFAPKTQNN 1015
Q + G + R C +C HT C+YRFD ++ +
Sbjct: 263 GQARGRGR-------------GLGGQDRRPTCQVCFKRGHTAADCWYRFDEDYVADEK-- 307
Query: 1016 NNFQQS*CTINSPSVSVARFGNQVTESPQDIYWYPYSGVTNHLTYDLGNLNLDADYQGNE 1195
+ NS + D WY +G T+H+T +L L Y GNE
Sbjct: 308 ----LAAAATNSYGI--------------DTNWYIDTGATDHITGELEKLTTKEKYNGNE 349
Query: 1196 RIQTASGASMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFE 1375
+I TASGA M ISH G+ + P + H LNN+L+VPQ K+L+S SQ A DN+ F E
Sbjct: 350 QIHTASGAGMDISHIGHTTVHTPSRNIH---LNNVLYVPQAKKSLISASQLATDNSAFLE 406
Query: 1376 FHPFLCAVKDLNSGTILLKGTLKDGQY 1456
H ++KD + ILL+G + G Y
Sbjct: 407 LHSKFFSIKDQVTKDILLEGRCRHGLY 433
Score = 33.1 bits (74), Expect(3) = 2e-44
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 123 QSQLITTKLNESNYLIWEQQILTTIKGYGLLGYLTG 230
Q ++ KL + N+ +W+ Q+ ++G L G+LTG
Sbjct: 16 QGHSVSEKLGKGNHALWKAQVSAAVRGARLQGHLTG 51
Score = 32.0 bits (71), Expect(3) = 2e-44
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 1554 SKLDLDVWHYRMGHPSYDIMKRAL 1625
+KL L WH R+GHPS I+K+ +
Sbjct: 451 TKLSLSRWHSRLGHPSLPIVKQVI 474
>emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera]
Length = 1083
Score = 175 bits (443), Expect(2) = 7e-44
Identities = 121/386 (31%), Positives = 189/386 (48%), Gaps = 14/386 (3%)
Frame = +2
Query: 392 VGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKGNMKIREYFNKMKTTCDMLAMVG 571
+G N++ ++L+ F+S S A+ MQL+LELQ+ KKG++ + +Y K+K D LA +G
Sbjct: 5 IGHNSSHSTWNALEKTFSSSSRARIMQLRLELQSTKKGSLSMIDYIMKVKGAADSLAAIG 64
Query: 572 HHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVEAYCVLLSFEARMEAIEGNKSNN 751
+SE DQV+ LL GLG DYN +V + R +K ++ + +LL+FE R+E S
Sbjct: 65 EPVSEQDQVMNLLXGLGSDYNXVVTXINIRDDKISIEAVHSMLLAFEHRLEQ---QSSIE 121
Query: 752 DGSQLGANLTTQTQXXXXXXXXXXXXXXXQFQXXXXXXXXXXXXXXXK*GRFSYNNR--- 922
S + AN + + + Q + GR+ N R
Sbjct: 122 QFSPISANYXSSSNSRGGGRXYNGG----RXQNHTPNISNYTYRGXGRXGRYGQNRRHNS 177
Query: 923 -----ARC*ICNYSNHTTEKCYYRFDMNFAPKTQNNNNFQQS*CTINSPSVSVARFGNQV 1087
+C +C H + CY RFD+++ +Q +N + N VA N
Sbjct: 178 NSSEKPQCQLCGKFGHIVQICYXRFDISYQ-SSQXSNTSPSNAGNPNXIPAMVASSNNLA 236
Query: 1088 TESPQDIYWYPYSGVTNHLTYDLGNLNLDADYQGNERIQTASGASMIISHCGNVLIKYPP 1267
++ WY SG +HLT +GNL + Y G +++ +G + IS+ G+ +
Sbjct: 237 DDT-----WYLDSGANHHLTQSVGNLTSSSPYTGTDKVTIGNGKHLSISNTGSHRLL--- 288
Query: 1268 PSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFEFHPFLCAVKDLNSGTILLKGTLKD 1447
+H F L + HVP I+ NL+SV +F DNN EF VKDL++ +L +G L++
Sbjct: 289 SDSHSFHLKKVFHVPFISANLISVVKFCSDNNSLIEFRSNSFFVKDLHTKKVLAQGKLEN 348
Query: 1448 GQYNFSLIN------VNNTTSITFVS 1507
G Y F ++N V T S TF S
Sbjct: 349 GLYRFPVLNNKKVAFVGATNSSTFYS 374
Score = 31.2 bits (69), Expect(2) = 7e-44
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 1515 TIFQSNCNVVELGSKLDLDVWHYRMGHPSYDIMKRALQ 1628
T + N ++ + KL WHYR+GH S DI+ + +Q
Sbjct: 371 TFYSHNSSIFDNKVKL----WHYRLGHASTDIVTQIMQ 404
>ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266915 [Solanum
lycopersicum]
Length = 544
Score = 159 bits (401), Expect(3) = 1e-40
Identities = 121/398 (30%), Positives = 185/398 (46%), Gaps = 5/398 (1%)
Frame = +2
Query: 326 KQDQLIASWLLSSLSKNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKG 505
K+D++ WL ++ + +I+ + T +E L + S S A+ MQL+ +LQT KG
Sbjct: 97 KRDKIPLLWLKTTTNHSIIPYIMHIRTTREAWSYLSNLYQSQSRARVMQLRHQLQTTTKG 156
Query: 506 NMKIREYFNKMKTTCDMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVE 685
+ I +Y +K +T LA+ I++ + + +L L Y S+ +
Sbjct: 157 SSTIMDYVDKKRTISHSLALAARPITDEELMSAILFTLDSSYGPFRSSINPHLDNLTTDS 216
Query: 686 AYCVLLSFEARMEAIEGNKSNNDGSQLGANLTTQTQXXXXXXXXXXXXXXXQFQXXXXXX 865
+LL E ++ E KS QL AN ++ Q
Sbjct: 217 LLGLLLQEEEKLA--EETKS----FQLQANAISRQYSNRSPITGYPNQ-----QSVTTSQ 265
Query: 866 XXXXXXXXXK*GRFSYNNRAR--C*ICNYSNHTTEKCYYRFDMNFAPKTQNNNNFQQS*C 1039
R S + R C IC NH CY R +M+ P T+++N Q +
Sbjct: 266 KSSTRPTNTNPPRSSNRSSPRIICQICEKPNHHARNCYNRNNMDTYPPTRSSNRPQANMV 325
Query: 1040 TINSPSVSVARFGNQVTESPQDIYWYPYSGVTNHLTYDLGNLNLDADYQGNERIQTASGA 1219
T PS + + + ++ W+ SG TNH+T DL L++ DY G +++ +G
Sbjct: 326 T---PSTNSMMSPSAIIDNS----WFADSGATNHVTSDLSQLSIHMDYNGEDQLALGNGQ 378
Query: 1220 SMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFEFHPFLCAV 1399
+ I+H G+ + H LN +LHVP ITK+LLSVSQF KDNNVF EFHP C V
Sbjct: 379 KLSINHIGSSKLSCATRPLH---LNKILHVPSITKSLLSVSQFTKDNNVFMEFHPSCCFV 435
Query: 1400 KDLNSGTILLKGTLKDGQYNF---SLINVNNTTSITFV 1504
KD G ILL+G++ DG Y F L ++++T FV
Sbjct: 436 KD-PQGKILLRGSIDDGLYRFDGGGLPVISSSTPRAFV 472
Score = 28.9 bits (63), Expect(3) = 1e-40
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +3
Query: 90 VTTMTNHVIQLQSQLITTKLNESNYLIWEQQILTTIKGYGLLGYLTGEQAISYT 251
+T + +I L + KL+ NY +W+ + + + + L G+L G + S T
Sbjct: 24 ITDSNSQIIALPG--LPIKLDCGNYYLWQSTVYSAFEAFDLEGHLDGTNSPSAT 75
Score = 28.5 bits (62), Expect(3) = 1e-40
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 1554 SKLDLDVWHYRMGHPSYDIMKR 1619
S+ L WH R+GHP +++R
Sbjct: 474 SRASLQAWHERLGHPHEQLLRR 495
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 163 bits (413), Expect(2) = 8e-40
Identities = 125/381 (32%), Positives = 171/381 (44%), Gaps = 36/381 (9%)
Frame = +2
Query: 428 LKTGFASHSLAKQMQLKLELQTLKKGNMKIREYFNKMKTTCDMLAMVGHHISENDQVLYL 607
L+ FAS + AK Q K +LQ KKG I EY K+K D LA VG +S D V +
Sbjct: 109 LEQYFASQTRAKAKQFKTQLQHTKKGGSTIDEYLAKIKVCVDSLASVGVSLSTKDHVESI 168
Query: 608 LEGLGLDYNSLVVSLTSRTEKCNMVEAYCVLLSFE------------------ARMEAIE 733
L+GL DY S V S+ R + ++ E +L++ E A A+E
Sbjct: 169 LDGLPNDYESFVTSVILRNDDFSVEEIEALLMAHESRVEKNNNSLDSSPSAHVASSNAVE 228
Query: 734 -GNK-------SNNDGSQLGANLTTQTQXXXXXXXXXXXXXXXQFQXXXXXXXXXXXXXX 889
GN+ +N+ GS G N +
Sbjct: 229 KGNRFKQDYYAANSQGSHSGYNGGFGRGGDFGRRGGFYGGRGFNWNYNGRSNRGGFRGRG 288
Query: 890 XK*GRF---------SYNNRARC*ICNYSNHTTEKCYYRFDMNF-APKTQNNNNFQQS*C 1039
K G F + N + C +C H +CYYRFD F P+ ++ N
Sbjct: 289 NK-GSFQARPPWNSDNQNEKPACQLCGKIGHVVAQCYYRFDHTFQVPQNLSSRNSSPRAY 347
Query: 1040 TINSPSVSVARFGNQVTESPQDIYWYPYSGVTNHLTYDLGNLNLDADYQGNERIQTASGA 1219
SP V+ ++V D WYP SG +NH+T + NL A++ G ++ +G
Sbjct: 348 YSFSPQVNGVIPTSEVFS---DDNWYPDSGASNHVTPNPENLMKSAEFAGQNQVHVGNGT 404
Query: 1220 SMIISHCGNVLIKYPPPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFEFHPFLCAV 1399
+ I H G P S+ LLN+LLHVP ITKNLLSVS+FAKDN VFFEFH C V
Sbjct: 405 GLSIKHIGQSEF-LSPFSSKPLLLNHLLHVPSITKNLLSVSKFAKDNKVFFEFHSDSCFV 463
Query: 1400 KDLNSGTILLKGTLKDGQYNF 1462
KD + +L+ G ++DG Y F
Sbjct: 464 KDQVTQAVLMVGKVRDGLYAF 484
Score = 29.3 bits (64), Expect(2) = 8e-40
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 1521 FQSNCNVVELGSKLDLDVWHYRMGHPSYDIMKRAL 1625
F S L S DL WH R+GHPS +K L
Sbjct: 508 FSSKVCTTSLSSTFDL--WHKRLGHPSAATIKNVL 540
>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2074
Score = 166 bits (420), Expect(2) = 1e-39
Identities = 110/364 (30%), Positives = 165/364 (45%), Gaps = 2/364 (0%)
Frame = +2
Query: 371 KNILVTTVGFNTAKEI*DSLKTGFASHSLAKQMQLKLELQTLKKGNMKIREYFNKMKTTC 550
K+IL V TA + T +S S A+ + +L L T +KG++ + EY KMKT
Sbjct: 1058 KDILTQVVNLETAAATWRVITTMLSSQSRARALNTRLALSTTRKGDLSVTEYIGKMKTLA 1117
Query: 551 DMLAMVGHHISENDQVLYLLEGLGLDYNSLVVSLTSRTEKCNMVEAYCVLLSFEARMEAI 730
D ++ G + + + + Y+L GL DY +V +L + E + E Y LLSFE+R +
Sbjct: 1118 DEMSSAGKPLDDEEMMSYILPGLDDDYEPVVSTLVGKAEAVPVAEIYTQLLSFESRAKL- 1176
Query: 731 EGNKSNNDGSQLGANLTTQTQXXXXXXXXXXXXXXXQFQXXXXXXXXXXXXXXXK*G--R 904
+ +GS + + F+ G R
Sbjct: 1177 ---RQQANGSSVNSARRGGKGGGGGFSNNVNTGNTGAFRGRGGGRGDRGGRGRGNGGGAR 1233
Query: 905 FSYNNRARC*ICNYSNHTTEKCYYRFDMNFAPKTQNNNNFQQS*CTINSPSVSVARFGNQ 1084
FS R+ C +C H C+YR+D NF P +S + + A +G
Sbjct: 1234 FSNKPRSTCQLCGKIGHVVADCWYRYDENFIP---------------DSKTAAAASYG-- 1276
Query: 1085 VTESPQDIYWYPYSGVTNHLTYDLGNLNLDADYQGNERIQTASGASMIISHCGNVLIKYP 1264
D WY +G T+H+T +L L Y G E+I TASGA M I H G+ +I P
Sbjct: 1277 -----VDTNWYMDTGATDHITGELDKLTTHEKYNGKEQIHTASGAGMDIKHVGHSIIHTP 1331
Query: 1265 PPSTHIFLLNNLLHVPQITKNLLSVSQFAKDNNVFFEFHPFLCAVKDLNSGTILLKGTLK 1444
+ L N+LHVP+ KNL+S + A DN+ F E HP A+KD + +LL+G +
Sbjct: 1332 ICNIQ---LKNILHVPKAEKNLISAHRLAVDNHAFVEVHPRFFAIKDQVTKNLLLRGPCR 1388
Query: 1445 DGQY 1456
+G Y
Sbjct: 1389 NGLY 1392
Score = 25.8 bits (55), Expect(2) = 1e-39
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3
Query: 1575 WHYRMGHPSYDIMKRAL 1625
WH R+GHPS I+++ +
Sbjct: 1416 WHSRLGHPSLAIVQKVV 1432