BLASTX nr result
ID: Rehmannia25_contig00019034
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00019034
(456 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera] 134 2e-29
emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera] 132 4e-29
emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera] 131 1e-28
ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624... 117 1e-24
ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660... 115 6e-24
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 112 4e-23
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 112 4e-23
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 112 4e-23
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 112 4e-23
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 112 4e-23
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 112 5e-23
emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera] 112 7e-23
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 111 1e-22
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 110 3e-22
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 110 3e-22
gb|AAB82754.1| retrofit [Oryza longistaminata] 109 3e-22
ref|XP_006584318.1| PREDICTED: uncharacterized protein LOC102666... 109 4e-22
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 109 4e-22
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol... 108 6e-22
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 108 6e-22
>emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera]
Length = 722
Score = 134 bits (336), Expect = 2e-29
Identities = 58/83 (69%), Positives = 66/83 (79%)
Frame = +2
Query: 5 SPFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPS 184
SPF+ LFGS PDY F K FGC+CYPYLR YN K F+STKC+FLGYSPAH GYRC S S
Sbjct: 481 SPFETLFGSKPDYSFFKVFGCSCYPYLRSYNSHKFSFKSTKCLFLGYSPAHNGYRCFSSS 540
Query: 185 GRIYVARTVSFNELEFPYPTLFS 253
RIYVA+ V+FNE +FPY TLF+
Sbjct: 541 NRIYVAKLVTFNENDFPYSTLFT 563
>emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]
Length = 1099
Score = 132 bits (333), Expect = 4e-29
Identities = 62/101 (61%), Positives = 72/101 (71%), Gaps = 8/101 (7%)
Frame = +2
Query: 5 SPFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPS 184
SPF+ LFGS DY F K FGC+CY YLRPYN K FRSTKC+FLGYSP HKGYRCLS S
Sbjct: 455 SPFKTLFGSKLDYSFFKVFGCSCYSYLRPYNSHKFSFRSTKCLFLGYSPXHKGYRCLSXS 514
Query: 185 GRIYVARTVSFNELEFPYPTLF--------SVFDSFSTPSH 283
G+IYVA++++FNE +FPY TL S FS PS+
Sbjct: 515 GQIYVAKSITFNENDFPYSTLLTQPNIPHQSFIHKFSCPSY 555
>emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]
Length = 731
Score = 131 bits (329), Expect = 1e-28
Identities = 59/91 (64%), Positives = 68/91 (74%)
Frame = +2
Query: 5 SPFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPS 184
SPFQKLFG TPD FLK+FGC C+P+LRPYN KLQFRS+KC+FLGYS HKGY CL P
Sbjct: 77 SPFQKLFGCTPDSHFLKTFGCTCFPHLRPYNSHKLQFRSSKCLFLGYSSTHKGYLCLHPF 136
Query: 185 GRIYVARTVSFNELEFPYPTLFSVFDSFSTP 277
G+IY++R V FNE EFPY L + S P
Sbjct: 137 GKIYISRNVIFNEHEFPYSELLGLKYDVSHP 167
>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
Length = 1682
Score = 117 bits (294), Expect = 1e-24
Identities = 50/78 (64%), Positives = 61/78 (78%)
Frame = +2
Query: 5 SPFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPS 184
SP+QKLF PDY L+ FGCAC+PYLRPYN+ KL FRS +CVF+GYS +HKGY+CL S
Sbjct: 130 SPYQKLFQQVPDYVSLRVFGCACFPYLRPYNRHKLSFRSNRCVFIGYSSSHKGYQCLHSS 189
Query: 185 GRIYVARTVSFNELEFPY 238
GR+YV+ V F+E FPY
Sbjct: 190 GRVYVSNHVIFDEQSFPY 207
>ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660325 [Glycine max]
Length = 868
Score = 115 bits (288), Expect = 6e-24
Identities = 48/89 (53%), Positives = 64/89 (71%)
Frame = +2
Query: 5 SPFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPS 184
S + KL PDY L+ FGC+C+P+LRPYN KL +RS +C+FLGYS AHKGY+CL+P+
Sbjct: 775 SLYFKLLNKQPDYSCLRVFGCSCFPFLRPYNSHKLDYRSQECIFLGYSTAHKGYKCLAPN 834
Query: 185 GRIYVARTVSFNELEFPYPTLFSVFDSFS 271
G IY+++ V F E +FPY TLF +S
Sbjct: 835 GHIYISKDVLFQESKFPYSTLFHTIPHYS 863
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 112 bits (281), Expect = 4e-23
Identities = 52/82 (63%), Positives = 64/82 (78%), Gaps = 1/82 (1%)
Frame = +2
Query: 5 SPFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPS 184
+P KL G+TPDY L+ FGCAC+P LRPYNQ KLQFRST+CVFLGYS HKG++CL S
Sbjct: 664 TPLHKLTGATPDYSSLRIFGCACWPNLRPYNQHKLQFRSTRCVFLGYSNMHKGFKCLDIS 723
Query: 185 -GRIYVARTVSFNELEFPYPTL 247
GRIY++R V F+E FP+ +L
Sbjct: 724 TGRIYISRDVVFDEHVFPFASL 745
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 112 bits (281), Expect = 4e-23
Identities = 48/83 (57%), Positives = 59/83 (71%)
Frame = +2
Query: 8 PFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSG 187
P + LF S PDY FLK FGC+C+P LRPYN KLQ+RS +C FLGYS HKGY+C+S +G
Sbjct: 731 PIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKHKGYKCMSSNG 790
Query: 188 RIYVARTVSFNELEFPYPTLFSV 256
R+Y++ V FNE FPY V
Sbjct: 791 RVYISHDVIFNETSFPYSKTIQV 813
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 112 bits (281), Expect = 4e-23
Identities = 49/79 (62%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = +2
Query: 5 SPFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSP- 181
SPFQ LFG +P+Y K FGC CYPY+RPYN++KL +RS++CVFLGYS HKGY CL+P
Sbjct: 727 SPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSSNHKGYMCLNPL 786
Query: 182 SGRIYVARTVSFNELEFPY 238
+GR+YV R V F+E FP+
Sbjct: 787 TGRLYVTRHVVFHETVFPF 805
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 112 bits (281), Expect = 4e-23
Identities = 49/79 (62%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = +2
Query: 5 SPFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSP- 181
SPFQ LFG +P+Y K FGC CYPY+RPYN++KL +RS++CVFLGYS HKGY CL+P
Sbjct: 536 SPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSSNHKGYMCLNPL 595
Query: 182 SGRIYVARTVSFNELEFPY 238
+GR+YV R V F+E FP+
Sbjct: 596 TGRLYVTRHVVFHETVFPF 614
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 112 bits (281), Expect = 4e-23
Identities = 48/82 (58%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Frame = +2
Query: 5 SPFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPS 184
+P ++LF TPDY L+ FGCAC+P+LRPYN KLQFRS +C FLGYSP HKG++CL PS
Sbjct: 462 TPLERLFKQTPDYNLLRVFGCACWPHLRPYNARKLQFRSKQCTFLGYSPLHKGFKCLDPS 521
Query: 185 -GRIYVARTVSFNELEFPYPTL 247
GR+Y++ V F+E FP+ +L
Sbjct: 522 TGRVYISHDVIFDENVFPFASL 543
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 112 bits (280), Expect = 5e-23
Identities = 49/82 (59%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Frame = +2
Query: 5 SPFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPS 184
SP ++L G PDY L+ FGCAC+P LRPYN+ KLQFRST C FLGYS HKG++CL PS
Sbjct: 662 SPLERLLGHKPDYNALRVFGCACWPNLRPYNKHKLQFRSTTCTFLGYSTLHKGFKCLDPS 721
Query: 185 -GRIYVARTVSFNELEFPYPTL 247
GR+Y++R V F+E +FP+ L
Sbjct: 722 TGRVYISRDVVFDETQFPFTKL 743
>emb|CAN64002.1| hypothetical protein VITISV_023116 [Vitis vinifera]
Length = 1211
Score = 112 bits (279), Expect = 7e-23
Identities = 52/101 (51%), Positives = 65/101 (64%), Gaps = 10/101 (9%)
Frame = +2
Query: 8 PFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPSG 187
P + LF S P+Y FLK FGC+C+P LRPYN KLQ+ S +C FLGYS HKGY C+S +G
Sbjct: 552 PIEVLFKSIPBYSFLKVFGCSCFPNLRPYNTHKLQYXSEECTFLGYSLKHKGYXCMSSNG 611
Query: 188 RIYVARTVSFNELEFPY----------PTLFSVFDSFSTPS 280
R+Y++R V FNE FPY P+ S F S +PS
Sbjct: 612 RVYISRDVIFNETSFPYSKTIQASSCLPSTVSPFTSHLSPS 652
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 111 bits (277), Expect = 1e-22
Identities = 48/82 (58%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Frame = +2
Query: 5 SPFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPS 184
+P + LF TPDY L+ FGCAC+P+LRPYN KLQFRS +C FLGYS HKG++CL PS
Sbjct: 664 TPLEHLFNQTPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTFLGYSTLHKGFKCLDPS 723
Query: 185 -GRIYVARTVSFNELEFPYPTL 247
GR+Y++R V F+E FP+ L
Sbjct: 724 TGRVYISRDVIFDETNFPFAKL 745
>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1384
Score = 110 bits (274), Expect = 3e-22
Identities = 49/79 (62%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = +2
Query: 5 SPFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSP- 181
SP+++LF P Y LK FGCAC+PYLRPYN SKLQ RS +CVFLGYS H+GYRC P
Sbjct: 608 SPYEQLFHRVPQYHSLKVFGCACFPYLRPYNSSKLQLRSKRCVFLGYSLNHQGYRCFDPS 667
Query: 182 SGRIYVARTVSFNELEFPY 238
SGR+Y++R V F+E FP+
Sbjct: 668 SGRVYLSRHVLFDESSFPF 686
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 110 bits (274), Expect = 3e-22
Identities = 49/82 (59%), Positives = 64/82 (78%), Gaps = 1/82 (1%)
Frame = +2
Query: 5 SPFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPS 184
+P ++LF TPDYK L++FGCAC+P LRPYN KLQFRS +CVFLG+S HKG++CL S
Sbjct: 651 TPLERLFKQTPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVFLGFSNIHKGFKCLDVS 710
Query: 185 -GRIYVARTVSFNELEFPYPTL 247
GR+YV+R V+F+E FP+ L
Sbjct: 711 TGRVYVSRDVTFDEQVFPFANL 732
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 109 bits (273), Expect = 3e-22
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Frame = +2
Query: 5 SPFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLS-P 181
+P +KLF PDY L+ FGCAC+P+LRPYN KLQFRS +CVFLG+S HKG++CL
Sbjct: 664 TPLEKLFNQKPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVS 723
Query: 182 SGRIYVARTVSFNELEFPYPTLFS 253
SGR+Y++R V F+E FP+ TL S
Sbjct: 724 SGRVYISRDVVFDENVFPFSTLHS 747
>ref|XP_006584318.1| PREDICTED: uncharacterized protein LOC102666325 [Glycine max]
Length = 651
Score = 109 bits (272), Expect = 4e-22
Identities = 45/78 (57%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Frame = +2
Query: 8 PFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCL-SPS 184
P + LF + PDY FL++FGCACYP L PYN K Q+RS +C+F+GYS +H+GY+CL + S
Sbjct: 551 PLKVLFNNVPDYNFLRAFGCACYPLLTPYNNPKFQYRSKECIFMGYSTSHRGYKCLDNKS 610
Query: 185 GRIYVARTVSFNELEFPY 238
GRIY+++ V FNE FPY
Sbjct: 611 GRIYISKDVLFNEKHFPY 628
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 109 bits (272), Expect = 4e-22
Identities = 49/82 (59%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Frame = +2
Query: 5 SPFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCL-SP 181
SP + LF TPDY+ L++FGCAC+P LRPYN K+ FRS +C FLGYSP HKG+RCL S
Sbjct: 493 SPLECLFKQTPDYQALRTFGCACWPDLRPYNSHKMHFRSKRCTFLGYSPLHKGFRCLDSS 552
Query: 182 SGRIYVARTVSFNELEFPYPTL 247
+GRIY++R V F+E FP+ L
Sbjct: 553 TGRIYISRDVVFDESVFPFAEL 574
>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 969
Score = 108 bits (271), Expect = 6e-22
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Frame = +2
Query: 5 SPFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPS 184
+PF++LF PDY L+ FGC C+P LRPYN KLQFRS +CVFLGYS HKG++CL S
Sbjct: 511 TPFERLFHKQPDYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVS 570
Query: 185 -GRIYVARTVSFNELEFPYPTLFS 253
GR+YV+R V+F+E FP+ +L S
Sbjct: 571 TGRVYVSRDVTFDENFFPFASLHS 594
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 1313
Score = 108 bits (271), Expect = 6e-22
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Frame = +2
Query: 5 SPFQKLFGSTPDYKFLKSFGCACYPYLRPYNQSKLQFRSTKCVFLGYSPAHKGYRCLSPS 184
+PF++LF PDY L+ FGC C+P LRPYN KLQFRS +CVFLGYS HKG++CL S
Sbjct: 511 TPFERLFHKQPDYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLHKGFKCLDVS 570
Query: 185 -GRIYVARTVSFNELEFPYPTLFS 253
GR+YV+R V+F+E FP+ +L S
Sbjct: 571 TGRVYVSRDVTFDENFFPFASLHS 594