BLASTX nr result
ID: Rehmannia25_contig00019002
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00019002
(341 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001275266.1| bromodomain-containing RNA-binding protein 1... 141 8e-32
emb|CAD13175.1| viroid RNA-binding protein [Solanum lycopersicum] 139 5e-31
ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum ly... 139 5e-31
emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Ni... 137 1e-30
emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Ni... 136 3e-30
emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Ni... 136 3e-30
emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Ni... 135 6e-30
gb|EPS63386.1| hypothetical protein M569_11400, partial [Genlise... 118 7e-25
emb|CBI35445.3| unnamed protein product [Vitis vinifera] 113 3e-23
ref|XP_003631709.1| PREDICTED: transcription factor GTE2-like [V... 110 1e-22
ref|XP_004289817.1| PREDICTED: transcription factor GTE7-like is... 109 3e-22
gb|ABI14812.1| chloroplast bromodomain-containing protein [Pachy... 109 4e-22
gb|EOX98605.1| Global transcription factor group E2, putative is... 108 6e-22
gb|EOX98604.1| Global transcription factor group, putative isofo... 108 6e-22
gb|EOX98601.1| Global transcription factor group E2, putative is... 108 6e-22
gb|EXC33022.1| Transcription factor GTE4 [Morus notabilis] 107 1e-21
ref|XP_004504873.1| PREDICTED: transcription factor GTE7-like is... 107 2e-21
ref|XP_003608346.1| Bromodomain-containing protein [Medicago tru... 107 2e-21
gb|ACJ85698.1| unknown [Medicago truncatula] 107 2e-21
ref|XP_003608349.1| Bromodomain-containing protein [Medicago tru... 107 2e-21
>ref|NP_001275266.1| bromodomain-containing RNA-binding protein 1 [Solanum tuberosum]
gi|57282314|emb|CAD43283.1| bromodomain-containing
RNA-binding protein 1 [Solanum tuberosum]
Length = 602
Score = 141 bits (356), Expect = 8e-32
Identities = 73/99 (73%), Positives = 82/99 (82%), Gaps = 4/99 (4%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LPQEKMPQLVQIIRKRN+HLAQDGDEIELDIE LDTETLWELDRF+TNWKK +SKTKRQA
Sbjct: 424 LPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTKRQA 483
Query: 159 LMVNN----DPAAGVAAPSTPIAEADMGALSDKNGDSFK 55
LM+NN +A +A +T +AEAD S+KN DSFK
Sbjct: 484 LMINNLGPPSASAAASAATTSVAEADGPTTSEKN-DSFK 521
>emb|CAD13175.1| viroid RNA-binding protein [Solanum lycopersicum]
Length = 313
Score = 139 bits (349), Expect = 5e-31
Identities = 73/98 (74%), Positives = 81/98 (82%), Gaps = 3/98 (3%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LPQEKMPQLVQIIRKRN+HLAQDGDEIELDIE LDTETLWELDRF+TNWKK +SKTKRQA
Sbjct: 135 LPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTKRQA 194
Query: 159 LMVNNDP---AAGVAAPSTPIAEADMGALSDKNGDSFK 55
LM N P +A +A +T +AEAD S+KN DSFK
Sbjct: 195 LMNNLGPPSASAAASAATTSVAEADGPTTSEKN-DSFK 231
>ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
gi|10179602|gb|AAG13810.1|AF190891_1 PSTVd RNA-binding
protein Virp1a [Solanum lycopersicum]
gi|10179604|gb|AAG13811.1|AF190892_1 PSTVd RNA-binding
protein Virp1b [Solanum lycopersicum]
gi|10179606|gb|AAG13812.1|AF190893_1 PSTVd RNA-binding
protein Virp1c [Solanum lycopersicum]
gi|10179608|gb|AAG13813.1|AF190894_1 PSTVd RNA-binding
protein Virp1d [Solanum lycopersicum]
gi|13186132|emb|CAC33448.1| PSTVd RNA-biding protein,
Virp1 [Solanum lycopersicum] gi|13186134|emb|CAC33449.1|
PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186136|emb|CAC33450.1| PSTVd RNA-biding protein,
Virp1 [Solanum lycopersicum] gi|13186138|emb|CAC33451.1|
PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
Length = 602
Score = 139 bits (349), Expect = 5e-31
Identities = 73/98 (74%), Positives = 81/98 (82%), Gaps = 3/98 (3%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LPQEKMPQLVQIIRKRN+HLAQDGDEIELDIE LDTETLWELDRF+TNWKK +SKTKRQA
Sbjct: 424 LPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTKRQA 483
Query: 159 LMVNNDP---AAGVAAPSTPIAEADMGALSDKNGDSFK 55
LM N P +A +A +T +AEAD S+KN DSFK
Sbjct: 484 LMNNLGPPSASAAASAATTSVAEADGPTTSEKN-DSFK 520
>emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Nicotiana
benthamiana]
Length = 615
Score = 137 bits (345), Expect = 1e-30
Identities = 73/100 (73%), Positives = 82/100 (82%), Gaps = 5/100 (5%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LPQEKMPQLVQIIRKRN+HLAQDGDEIELDIE LDTETLWELDRF+TNWKK +SKTKRQA
Sbjct: 431 LPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTKRQA 490
Query: 159 LMVN-----NDPAAGVAAPSTPIAEADMGALSDKNGDSFK 55
L+ N + AA AA +T +AEAD + S+KN DSFK
Sbjct: 491 LINNLGQPPSASAAASAATTTSVAEADAPSTSEKN-DSFK 529
>emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Nicotiana tabacum]
Length = 616
Score = 136 bits (343), Expect = 3e-30
Identities = 73/100 (73%), Positives = 82/100 (82%), Gaps = 5/100 (5%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LPQEKMPQLVQIIRKRN+HLAQDGDEIELDIE LDTETLWELDRF+TNWKK +SKTKRQA
Sbjct: 433 LPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTKRQA 492
Query: 159 LMVN-----NDPAAGVAAPSTPIAEADMGALSDKNGDSFK 55
L+ N + AA AA +T +AEAD + S+KN DSFK
Sbjct: 493 LINNLGQPPSASAAASAATTTSVAEADGPSTSEKN-DSFK 531
>emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Nicotiana tabacum]
Length = 617
Score = 136 bits (343), Expect = 3e-30
Identities = 73/100 (73%), Positives = 82/100 (82%), Gaps = 5/100 (5%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LPQEKMPQLVQIIRKRN+HLAQDGDEIELDIE LDTETLWELDRF+TNWKK +SKTKRQA
Sbjct: 434 LPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTKRQA 493
Query: 159 LMVN-----NDPAAGVAAPSTPIAEADMGALSDKNGDSFK 55
L+ N + AA AA +T +AEAD + S+KN DSFK
Sbjct: 494 LINNLGQPPSASAAASAATTTSVAEADGPSTSEKN-DSFK 532
>emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Nicotiana
benthamiana]
Length = 613
Score = 135 bits (340), Expect = 6e-30
Identities = 73/99 (73%), Positives = 82/99 (82%), Gaps = 4/99 (4%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LPQEKMPQLVQIIRKRN+HLAQDGDEIELDIE LDTETLWELDRF+TNWKK +SKTKRQA
Sbjct: 433 LPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTKRQA 492
Query: 159 LMVN--NDPAAGVA--APSTPIAEADMGALSDKNGDSFK 55
L+ N P+A A A +T +AEAD + S+KN DSFK
Sbjct: 493 LINNLGQPPSASAAASAATTSVAEADGPSTSEKN-DSFK 530
>gb|EPS63386.1| hypothetical protein M569_11400, partial [Genlisea aurea]
Length = 390
Score = 118 bits (296), Expect = 7e-25
Identities = 54/66 (81%), Positives = 61/66 (92%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LPQEKMPQL+ II+KRN HLAQDGDEIELDIE +D ETLWELDRF+TNWKK +SKTKRQA
Sbjct: 316 LPQEKMPQLIHIIKKRNAHLAQDGDEIELDIEAIDVETLWELDRFVTNWKKMVSKTKRQA 375
Query: 159 LMVNND 142
LM+NN+
Sbjct: 376 LMMNNN 381
>emb|CBI35445.3| unnamed protein product [Vitis vinifera]
Length = 564
Score = 113 bits (282), Expect = 3e-23
Identities = 54/69 (78%), Positives = 60/69 (86%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LPQEKM Q+VQII K+N HL QDGDEIELDIE +DTETLWELDR +TNWKK +SK KRQA
Sbjct: 400 LPQEKMDQVVQIISKKNGHLTQDGDEIELDIEAVDTETLWELDRLVTNWKKMVSKIKRQA 459
Query: 159 LMVNNDPAA 133
LMVNN+ AA
Sbjct: 460 LMVNNNTAA 468
>ref|XP_003631709.1| PREDICTED: transcription factor GTE2-like [Vitis vinifera]
Length = 561
Score = 110 bits (276), Expect = 1e-22
Identities = 52/69 (75%), Positives = 60/69 (86%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LPQEKM Q+VQII K+N HL QDGDEIELDIE +DTETLWELDR +TNWKK +SK KRQA
Sbjct: 404 LPQEKMDQVVQIISKKNGHLTQDGDEIELDIEAVDTETLWELDRLVTNWKKMVSKIKRQA 463
Query: 159 LMVNNDPAA 133
LMVNN+ ++
Sbjct: 464 LMVNNNTSS 472
>ref|XP_004289817.1| PREDICTED: transcription factor GTE7-like isoform 1 [Fragaria vesca
subsp. vesca] gi|470106953|ref|XP_004289818.1|
PREDICTED: transcription factor GTE7-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 579
Score = 109 bits (273), Expect = 3e-22
Identities = 53/73 (72%), Positives = 62/73 (84%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LPQEKM Q+VQIIRKRN HL QDGDEIELDIE +DTETLWELDR +TN+KK +SK KRQA
Sbjct: 410 LPQEKMDQVVQIIRKRNGHLKQDGDEIELDIEAVDTETLWELDRLVTNYKKMVSKIKRQA 469
Query: 159 LMVNNDPAAGVAA 121
LM NN+ + +A+
Sbjct: 470 LMGNNNSNSNIAS 482
>gb|ABI14812.1| chloroplast bromodomain-containing protein [Pachysandra terminalis]
Length = 428
Score = 109 bits (272), Expect = 4e-22
Identities = 60/91 (65%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LPQEKM Q+VQIIRKRN HLAQDGDEIELDIE +DTETLWELDRF+ N KK MSK KRQA
Sbjct: 255 LPQEKMEQVVQIIRKRNGHLAQDGDEIELDIEVVDTETLWELDRFVYNCKKLMSKIKRQA 314
Query: 159 LMVNNDPAA--GVAAPSTPIAEADMGALSDK 73
L+ NN A G +P + EA A + K
Sbjct: 315 LVSNNQNTAEEGNKSPVSDSHEAAEAASAKK 345
>gb|EOX98605.1| Global transcription factor group E2, putative isoform 5, partial
[Theobroma cacao]
Length = 547
Score = 108 bits (271), Expect = 6e-22
Identities = 52/65 (80%), Positives = 57/65 (87%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LPQEKM +VQIIRKRN HL QDGDEIELDIE +DTETLWELDRF+TN+KK +SK KRQA
Sbjct: 407 LPQEKMDNVVQIIRKRNGHLRQDGDEIELDIEAMDTETLWELDRFVTNYKKMVSKIKRQA 466
Query: 159 LMVNN 145
LM NN
Sbjct: 467 LMANN 471
>gb|EOX98604.1| Global transcription factor group, putative isoform 4 [Theobroma
cacao]
Length = 483
Score = 108 bits (271), Expect = 6e-22
Identities = 52/65 (80%), Positives = 57/65 (87%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LPQEKM +VQIIRKRN HL QDGDEIELDIE +DTETLWELDRF+TN+KK +SK KRQA
Sbjct: 407 LPQEKMDNVVQIIRKRNGHLRQDGDEIELDIEAMDTETLWELDRFVTNYKKMVSKIKRQA 466
Query: 159 LMVNN 145
LM NN
Sbjct: 467 LMANN 471
>gb|EOX98601.1| Global transcription factor group E2, putative isoform 1 [Theobroma
cacao] gi|508706706|gb|EOX98602.1| Global transcription
factor group E2, putative isoform 1 [Theobroma cacao]
gi|508706707|gb|EOX98603.1| Global transcription factor
group E2, putative isoform 1 [Theobroma cacao]
Length = 566
Score = 108 bits (271), Expect = 6e-22
Identities = 52/65 (80%), Positives = 57/65 (87%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LPQEKM +VQIIRKRN HL QDGDEIELDIE +DTETLWELDRF+TN+KK +SK KRQA
Sbjct: 407 LPQEKMDNVVQIIRKRNGHLRQDGDEIELDIEAMDTETLWELDRFVTNYKKMVSKIKRQA 466
Query: 159 LMVNN 145
LM NN
Sbjct: 467 LMANN 471
>gb|EXC33022.1| Transcription factor GTE4 [Morus notabilis]
Length = 559
Score = 107 bits (268), Expect = 1e-21
Identities = 55/80 (68%), Positives = 61/80 (76%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LPQEKM Q+VQIIRKRN HL QDGDEIELDIE +D ETLWELDR +TNWKK +SK KRQA
Sbjct: 390 LPQEKMDQVVQIIRKRNGHLKQDGDEIELDIEAVDIETLWELDRLVTNWKKMVSKIKRQA 449
Query: 159 LMVNNDPAAGVAAPSTPIAE 100
LM N + AP+ AE
Sbjct: 450 LMNNANNNNSNVAPNKGNAE 469
>ref|XP_004504873.1| PREDICTED: transcription factor GTE7-like isoform X1 [Cicer
arietinum]
Length = 534
Score = 107 bits (267), Expect = 2e-21
Identities = 51/66 (77%), Positives = 57/66 (86%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LP EKM Q+VQIIRKRN HL QDGDEIELD+E +DTETLWELDR +TNWKK +SK KRQA
Sbjct: 363 LPAEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTETLWELDRLVTNWKKMVSKIKRQA 422
Query: 159 LMVNND 142
LM NN+
Sbjct: 423 LMDNNN 428
>ref|XP_003608346.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509401|gb|AES90543.1| Bromodomain-containing
protein [Medicago truncatula]
Length = 518
Score = 107 bits (267), Expect = 2e-21
Identities = 51/66 (77%), Positives = 57/66 (86%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LP EKM Q+VQIIRKRN HL QDGDEIELD+E +DTETLWELDR +TNWKK +SK KRQA
Sbjct: 350 LPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTETLWELDRLVTNWKKMVSKIKRQA 409
Query: 159 LMVNND 142
LM NN+
Sbjct: 410 LMDNNN 415
>gb|ACJ85698.1| unknown [Medicago truncatula]
Length = 471
Score = 107 bits (267), Expect = 2e-21
Identities = 51/66 (77%), Positives = 57/66 (86%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LP EKM Q+VQIIRKRN HL QDGDEIELD+E +DTETLWELDR +TNWKK +SK KRQA
Sbjct: 366 LPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTETLWELDRLVTNWKKMVSKIKRQA 425
Query: 159 LMVNND 142
LM NN+
Sbjct: 426 LMDNNN 431
>ref|XP_003608349.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509404|gb|AES90546.1| Bromodomain-containing
protein [Medicago truncatula]
Length = 533
Score = 107 bits (267), Expect = 2e-21
Identities = 51/66 (77%), Positives = 57/66 (86%)
Frame = -3
Query: 339 LPQEKMPQLVQIIRKRNQHLAQDGDEIELDIETLDTETLWELDRFLTNWKKFMSKTKRQA 160
LP EKM Q+VQIIRKRN HL QDGDEIELD+E +DTETLWELDR +TNWKK +SK KRQA
Sbjct: 366 LPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTETLWELDRLVTNWKKMVSKIKRQA 425
Query: 159 LMVNND 142
LM NN+
Sbjct: 426 LMDNNN 431