BLASTX nr result

ID: Rehmannia25_contig00018926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00018926
         (314 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343731.1| PREDICTED: reticulon-like protein B21-like [...    64   2e-08
ref|XP_006350096.1| PREDICTED: reticulon-like protein B21-like [...    57   2e-06
ref|XP_004251753.1| PREDICTED: reticulon-like protein B21-like [...    57   3e-06

>ref|XP_006343731.1| PREDICTED: reticulon-like protein B21-like [Solanum tuberosum]
          Length = 746

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 9/82 (10%)
 Frame = +3

Query: 96  KPKKIVIEEKKLLH---RNEISVPISPAVKKQPQIPAVNHARF---HPNPTKTKPI--SD 251
           K KKIVI E+K +H     +  V ISP +KKQ  +     +R    HP+PT+TKP+  SD
Sbjct: 422 KTKKIVIVEEKKVHISNNEKKQVSISPIIKKQSNLSFSGQSRILHHHPSPTRTKPVPASD 481

Query: 252 NFH-GIPRTNSRLQSFVDLVMW 314
            F   IPR +S L+S VDLVMW
Sbjct: 482 EFQRNIPRQHSNLESLVDLVMW 503


>ref|XP_006350096.1| PREDICTED: reticulon-like protein B21-like [Solanum tuberosum]
          Length = 644

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/76 (46%), Positives = 47/76 (61%)
 Frame = +3

Query: 87  QEHKPKKIVIEEKKLLHRNEISVPISPAVKKQPQIPAVNHARFHPNPTKTKPISDNFHGI 266
           +++K KKIVIEEK+  + N+  +PIS    KQ  +P   +A  H + T+TK  SD F   
Sbjct: 329 EQNKLKKIVIEEKRFQYNNKRQMPISSINMKQ-SLPTFVNANIHQSATRTK--SDEFQS- 384

Query: 267 PRTNSRLQSFVDLVMW 314
            R  S+LQS VDLVMW
Sbjct: 385 -RQYSKLQSLVDLVMW 399


>ref|XP_004251753.1| PREDICTED: reticulon-like protein B21-like [Solanum lycopersicum]
          Length = 653

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/76 (43%), Positives = 48/76 (63%)
 Frame = +3

Query: 87  QEHKPKKIVIEEKKLLHRNEISVPISPAVKKQPQIPAVNHARFHPNPTKTKPISDNFHGI 266
           +++K KKIVIEEK+  + N+  +PI+    KQ   P + +A  H + T+TK  SD F   
Sbjct: 341 EQNKLKKIVIEEKRFQYNNKRQMPITSINMKQSP-PTLGNANIHQSATRTK--SDEFQS- 396

Query: 267 PRTNSRLQSFVDLVMW 314
            + +S+LQS VDLVMW
Sbjct: 397 -KQHSKLQSLVDLVMW 411


Top