BLASTX nr result

ID: Rehmannia25_contig00018805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00018805
         (1703 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY99341.1| unknown [Silene latifolia]                              60   3e-06
dbj|BAJ91496.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   6e-06
emb|CAC33018.1| hypothetical protein [Antirrhinum hispanicum]          59   8e-06

>gb|AAY99341.1| unknown [Silene latifolia]
          Length = 555

 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
 Frame = +2

Query: 605 DHF-FLDDYEIVIPGPEDKMDKPPARCLAFHVASLEAGLRFPLSDHVENILMGLDVCPAQ 781
           DH+ F   Y+IVIP     +  PP  C+  ++  LE GLRFPL+ +V  I+  ++V  AQ
Sbjct: 111 DHYSFGRGYKIVIPKEGQAVCCPPKGCIGVYIRHLEYGLRFPLNAYVVAIIKAMNVAVAQ 170

Query: 782 LVPNSFRHIIGFIIIMRFFNMDPSLVHFWSLYSMSSS 892
           L P + R IIGF+ +  F    P++  F  L+ +  S
Sbjct: 171 LHPLAIRTIIGFVWLCLFKGEAPTVNLFRRLHHLRPS 207


>dbj|BAJ91496.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 573

 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 28/85 (32%), Positives = 46/85 (54%)
 Frame = +2

Query: 668 PPARCLAFHVASLEAGLRFPLSDHVENILMGLDVCPAQLVPNSFRHIIGFIIIMRFFNMD 847
           PP   +  +  SLEAG+R PL     ++L    + PAQL PN +R + GF+ +  +  + 
Sbjct: 73  PPPGAICVYARSLEAGMRLPLQGFFSDVLAHFGIAPAQLTPNGWRAMAGFLALCDYAGVP 132

Query: 848 PSLVHFWSLYSMSSSNKTVEVGFFV 922
           PSL  F   + M S ++  E G+++
Sbjct: 133 PSLAVFRRFFVMCSLSQEHEKGWYL 157


>emb|CAC33018.1| hypothetical protein [Antirrhinum hispanicum]
          Length = 1504

 Score = 58.5 bits (140), Expect = 8e-06
 Identities = 24/88 (27%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
 Frame = +2

Query: 602  IDHFFLDDYEIVIPGPEDKMDKPPARCLAFHVASLEAGLRFPLSDHVENILMGLDVCPAQ 781
            +D + +   ++++P P +    PPA  L  +   +  GLR      + ++L  + +CP+Q
Sbjct: 978  LDQYGIVGLDVLVPNPSEHAFNPPAGYLTVYSEQIHNGLRCFFHPFISHVLSFMQICPSQ 1037

Query: 782  LVPNSFRHIIGFIIIMRFFN--MDPSLV 859
            LVP+S+R ++G++++  + N  M P+L+
Sbjct: 1038 LVPHSYRCLVGYVLLYNYLNIPMSPALL 1065


Top