BLASTX nr result

ID: Rehmannia25_contig00018742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00018742
         (439 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty...    57   3e-06
gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymera...    57   3e-06
emb|CCI61386.1| putative reverse transcriptase (RNA-dependent DN...    55   1e-05

>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
            aspartic, catalytic [Medicago truncatula]
          Length = 1715

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/49 (55%), Positives = 36/49 (73%)
 Frame = -3

Query: 437  NEVLYKIFSKLLQGKFKMIMMGELNFFIEIQVQQCQKGGYIPYSKYTKE 291
            N  L K FSKL+Q +F+M MMGEL FF+ IQ+ Q ++G Y+  +KYTKE
Sbjct: 1411 NASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKE 1459


>gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
            [Medicago truncatula]
          Length = 1654

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/49 (55%), Positives = 36/49 (73%)
 Frame = -3

Query: 437  NEVLYKIFSKLLQGKFKMIMMGELNFFIEIQVQQCQKGGYIPYSKYTKE 291
            N  L K FSKL+Q +F+M MMGEL FF+ IQ+ Q ++G Y+  +KYTKE
Sbjct: 1350 NASLCKEFSKLMQDEFEMSMMGELKFFLVIQINQSKEGVYVHQTKYTKE 1398


>emb|CCI61386.1| putative reverse transcriptase (RNA-dependent DNA polymerase),
           partial [Lens orientalis]
          Length = 225

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/49 (51%), Positives = 34/49 (69%)
 Frame = -3

Query: 437 NEVLYKIFSKLLQGKFKMIMMGELNFFIEIQVQQCQKGGYIPYSKYTKE 291
           N +L K FSK +Q +FKM MMGEL +F+ IQ+ Q  +G Y+  +KY KE
Sbjct: 153 NAMLGKEFSKSMQAEFKMSMMGELKYFLRIQINQTSEGTYVHQTKYVKE 201


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