BLASTX nr result
ID: Rehmannia25_contig00018359
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00018359
(911 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-... 368 1e-99
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-... 367 3e-99
gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobrom... 361 2e-97
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [... 359 7e-97
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ... 348 2e-93
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 348 2e-93
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-... 347 4e-93
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr... 347 4e-93
gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus pe... 346 8e-93
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-... 341 3e-91
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu... 340 4e-91
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp.... 334 2e-89
dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsi... 332 1e-88
ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis tha... 330 3e-88
gb|AAM91534.1| sigma factor SigC [Arabidopsis thaliana] 330 3e-88
ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Caps... 328 2e-87
ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutr... 324 2e-86
emb|CAD20832.1| sigma factor [Spinacia oleracea] 323 7e-86
emb|CAB83107.1| sigma factor 3 [Sinapis alba] 319 1e-84
gb|EPS65656.1| hypothetical protein M569_09119, partial [Genlise... 317 3e-84
>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
lycopersicum]
Length = 551
Score = 368 bits (945), Expect = 1e-99
Identities = 179/253 (70%), Positives = 215/253 (84%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AGI++KELQQHLH+GW+CRDELL+STRSLV+++A+NY GLGVAFEDL+QAGNMGVLQGA
Sbjct: 297 AGIEQKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAV 356
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKY 552
RFD TRGYKFSTYVQYWIRKS+S LVA+HARGVR+P T+ KVINQ+ KARKTLS S GK+
Sbjct: 357 RFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLSRSHGKF 416
Query: 551 PDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIR 372
P D EIAKFTGLS A+I ASKCLRVV SIDQK+G+ IN K +E+TPD S+ SPEE V+R
Sbjct: 417 PADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCINAKVLELTPDKSVTSPEEFVMR 476
Query: 371 QHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTK 192
Q ++ ++Y LL L+P+E+QVI RFGL +QRKSLEEIGR++ VSKEWIR+IER ALTK
Sbjct: 477 QDIVDNMYALLESLDPKEQQVIYFRFGLETHQRKSLEEIGRLYGVSKEWIRRIERRALTK 536
Query: 191 LRDEDCLKILGHY 153
LR D + + HY
Sbjct: 537 LRSADYFQHITHY 549
>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum tuberosum]
Length = 555
Score = 367 bits (942), Expect = 3e-99
Identities = 179/253 (70%), Positives = 217/253 (85%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AGI++KELQQ LH+GW+CRDELL+STRSLV+++A+NY GLGVAFEDL+QAGNMGVLQGA
Sbjct: 301 AGIEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAV 360
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKY 552
RFD TRGYKFSTYVQYWIRKS+S LVA+HARGVR+P T+ KVINQ+ KARKTLS S GK+
Sbjct: 361 RFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLSRSHGKF 420
Query: 551 PDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIR 372
P D EIAKFTGLS A+I ASKCLRVV SIDQK+G+ I+ K +E+TPD SI SPEETV+R
Sbjct: 421 PADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPDKSITSPEETVMR 480
Query: 371 QHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTK 192
Q ++ ++Y+LL L+P+E+QVI RFGL +QRKSLEEIGR++ VSKEWIR+IER ALTK
Sbjct: 481 QDIVDNMYSLLESLDPKEQQVIYFRFGLETHQRKSLEEIGRLYGVSKEWIRRIERRALTK 540
Query: 191 LRDEDCLKILGHY 153
LR+ D + + HY
Sbjct: 541 LRNADYFQHITHY 553
>gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
Length = 848
Score = 361 bits (926), Expect = 2e-97
Identities = 171/254 (67%), Positives = 215/254 (84%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AG+ +K LQQHL +GW+CRDELLRSTRSLV++ A+NY GLG+A EDL+QAG++GVLQGAE
Sbjct: 593 AGVSEKVLQQHLRFGWYCRDELLRSTRSLVLYFARNYRGLGIAHEDLIQAGSLGVLQGAE 652
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKY 552
RFD TRGY+FSTYVQ+WIRKS+S +VARHARG++VPCTLS+ I Q+QKARK LS S GKY
Sbjct: 653 RFDHTRGYRFSTYVQFWIRKSVSRIVARHARGIQVPCTLSRAIVQIQKARKALSKSHGKY 712
Query: 551 PDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIR 372
PD+ IAKFTGLS+AKI SA+KC+RVV SIDQKIG+ +N KY+E PD S+ SPE+TV+R
Sbjct: 713 PDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKIGDCMNAKYLEFIPDLSVRSPEKTVMR 772
Query: 371 QHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTK 192
QHM D++ LLNGL+ RE+QV++LR+GL + KSLEEIGR+F VSKEWIR+IE A+ K
Sbjct: 773 QHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKSLEEIGRLFHVSKEWIRRIEMKAMKK 832
Query: 191 LRDEDCLKILGHYV 150
LRD++ + L HY+
Sbjct: 833 LRDKETCRNLSHYL 846
>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 560
Score = 359 bits (922), Expect = 7e-97
Identities = 169/254 (66%), Positives = 213/254 (83%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AG+ K LQQ L +GW+CRDEL++STRSLV++ A+NY G G+A EDL+QAGN+GVL+GAE
Sbjct: 305 AGLDVKVLQQQLSFGWYCRDELIKSTRSLVLYFARNYRGTGIALEDLLQAGNLGVLEGAE 364
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKY 552
RFD TRGY+FSTYVQYWIRKSMS +V+R ARG+++PCTLS+ I Q+QKARK L+TS GKY
Sbjct: 365 RFDHTRGYRFSTYVQYWIRKSMSKIVSRLARGIQIPCTLSRAIYQIQKARKALTTSNGKY 424
Query: 551 PDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIR 372
PDD EIAK+TGLS+AKI SAS+CLRVV SIDQKIGE +N KY+E PDTS+ SPEE V+R
Sbjct: 425 PDDDEIAKYTGLSLAKIESASRCLRVVGSIDQKIGESLNAKYLEFLPDTSVQSPEEVVMR 484
Query: 371 QHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTK 192
QHMI D++ LL L+ RE+QV+ILRFGL + Q KSLEEIGR F VSKEW+R++E+ +T+
Sbjct: 485 QHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPKSLEEIGRHFHVSKEWVRRLEKRVMTR 544
Query: 191 LRDEDCLKILGHYV 150
LR+E+ + L HY+
Sbjct: 545 LRNEETCRNLRHYI 558
>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|296081598|emb|CBI20603.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 348 bits (892), Expect = 2e-93
Identities = 169/254 (66%), Positives = 205/254 (80%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AG+ KK LQQ L +GW+CRDELLRST SLV++IA+NY G+GVAFED++QAGN+GVLQGAE
Sbjct: 306 AGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAE 365
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKY 552
RFD T+GY+FSTYVQYWIRKSMSTLVARHARGV++P TL++ I Q+QKARK L S G+Y
Sbjct: 366 RFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRY 425
Query: 551 PDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIR 372
PDD+EIAKFTGLS+AKI SA CLRVV S DQ + +E TPDTSI SPEE ++
Sbjct: 426 PDDNEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQDCWGATILEFTPDTSIKSPEEGFMQ 485
Query: 371 QHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTK 192
Q D++ LL GL+PRE+Q+++LR+G G QRKSLEEIGR F VSKEWIRK+E+TAL
Sbjct: 486 QCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALAN 545
Query: 191 LRDEDCLKILGHYV 150
LRDE+ + L HYV
Sbjct: 546 LRDEEICQNLRHYV 559
>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
Length = 611
Score = 348 bits (892), Expect = 2e-93
Identities = 169/254 (66%), Positives = 205/254 (80%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AG+ KK LQQ L +GW+CRDELLRST SLV++IA+NY G+GVAFED++QAGN+GVLQGAE
Sbjct: 356 AGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAE 415
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKY 552
RFD T+GY+FSTYVQYWIRKSMSTLVARHARGV++P TL++ I Q+QKARK L S G+Y
Sbjct: 416 RFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRY 475
Query: 551 PDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIR 372
PDD+EIAKFTGLS+AKI SA CLRVV S DQ + +E TPDTSI SPEE ++
Sbjct: 476 PDDNEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQDCWGATILEFTPDTSIKSPEEGFMQ 535
Query: 371 QHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTK 192
Q D++ LL GL+PRE+Q+++LR+G G QRKSLEEIGR F VSKEWIRK+E+TAL
Sbjct: 536 QCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALAN 595
Query: 191 LRDEDCLKILGHYV 150
LRDE+ + L HYV
Sbjct: 596 LRDEEICQNLRHYV 609
>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
Length = 534
Score = 347 bits (890), Expect = 4e-93
Identities = 158/256 (61%), Positives = 216/256 (84%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AG+ ++ L+QHL +GW+CR+EL++STR LV+F+A+NY GLG+ F DL+QAGN+GVLQGAE
Sbjct: 279 AGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAE 338
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKY 552
RFD TRGYKFSTYVQYWIRKS+S +VARHARG+++PC L++ I+++QKARK L+ S GKY
Sbjct: 339 RFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKY 398
Query: 551 PDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIR 372
P+D EIAK+TGLS+A+I SAS+CLR+V SIDQKIG+ +N KY+E PD S+ SP+E V+R
Sbjct: 399 PEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIGDCLNAKYLEFAPDRSVKSPKEIVMR 458
Query: 371 QHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTK 192
QHM DV+ +L L+ RE+QV++LR+GL +++ KSLEEIG++F VSKEWIRK+E+ A+TK
Sbjct: 459 QHMKKDVFRILESLDSRERQVLVLRYGLNDHRPKSLEEIGKLFHVSKEWIRKLEKKAMTK 518
Query: 191 LRDEDCLKILGHYVYM 144
LRD + + L H++ +
Sbjct: 519 LRDSETCRDLSHFLVL 534
>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553989|gb|ESR64003.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 534
Score = 347 bits (890), Expect = 4e-93
Identities = 158/256 (61%), Positives = 216/256 (84%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AG+ ++ L+QHL +GW+CR+EL++STR LV+F+A+NY GLG+ F DL+QAGN+GVLQGAE
Sbjct: 279 AGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNVGVLQGAE 338
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKY 552
RFD TRGYKFSTYVQYWIRKS+S +VARHARG+++PC L++ I+++QKARK L+ S GKY
Sbjct: 339 RFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKIQKARKALTNSHGKY 398
Query: 551 PDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIR 372
P+D EIAK+TGLS+A+I SAS+CLR+V SIDQKIG+ +N KY+E PD S+ SP+E V+R
Sbjct: 399 PEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIGDCLNAKYLEFAPDRSVKSPKEIVMR 458
Query: 371 QHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTK 192
QHM DV+ +L L+ RE+QV++LR+GL +++ KSLEEIG++F VSKEWIRK+E+ A+TK
Sbjct: 459 QHMKKDVFRILESLDSRERQVLVLRYGLNDHRPKSLEEIGKLFHVSKEWIRKLEKKAMTK 518
Query: 191 LRDEDCLKILGHYVYM 144
LRD + + L H++ +
Sbjct: 519 LRDSETCRDLSHFLVL 534
>gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
Length = 555
Score = 346 bits (887), Expect = 8e-93
Identities = 170/254 (66%), Positives = 207/254 (81%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AG+ +K L QHL +GW+C+DEL+RSTRSLV+++A+NY GLGVA +DL+QAGN+G+LQGAE
Sbjct: 300 AGVHEKVLLQHLRFGWYCQDELIRSTRSLVLYLARNYRGLGVALDDLMQAGNLGLLQGAE 359
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKY 552
RFD +RGY+FSTYVQYWIRKSMS LVA+HARGV++P TLSK INQ+QKARK S KY
Sbjct: 360 RFDHSRGYRFSTYVQYWIRKSMSRLVAQHARGVQIPFTLSKAINQIQKARKANYNSHMKY 419
Query: 551 PDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIR 372
PDD EIAK TGLS+A+I SAS CLRVV S+D K+ E + YME TPDTS+ SPEETV+R
Sbjct: 420 PDDEEIAKITGLSLARIRSASTCLRVVGSVDHKMWESSDGTYMEFTPDTSLKSPEETVMR 479
Query: 371 QHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTK 192
QHM D++ LL GL RE+QV++LR+GL N KSLEEIGR+F VSKEWIRKIE+ AL K
Sbjct: 480 QHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLFHVSKEWIRKIEKKALMK 539
Query: 191 LRDEDCLKILGHYV 150
LR E+ K L HY+
Sbjct: 540 LRVEESHKYLSHYL 553
>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
subsp. vesca]
Length = 545
Score = 341 bits (874), Expect = 3e-91
Identities = 167/254 (65%), Positives = 208/254 (81%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AG+ +K LQQ LH+GW+C+DEL+RSTRSLV+++A+NY GLGVA +DL+QAGN+G+LQGAE
Sbjct: 289 AGVDEKVLQQQLHFGWYCQDELVRSTRSLVLYLARNYRGLGVALDDLLQAGNLGLLQGAE 348
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKY 552
RFD +RGY+FSTYVQYWIRKSMS LVA+HARG+++P TLSK IN++QKARK S KY
Sbjct: 349 RFDPSRGYRFSTYVQYWIRKSMSRLVAQHARGIKIPNTLSKAINRIQKARKANYNSHMKY 408
Query: 551 PDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIR 372
PDD EIAK TGLS+AKI SAS+CLRVV S+D KI E YME TPD ++ +PEE+V+R
Sbjct: 409 PDDEEIAKITGLSLAKISSASRCLRVVGSVDHKIWECSAGTYMEFTPDIAVETPEESVMR 468
Query: 371 QHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTK 192
QHM +D++ LL GL REK+V+ LR+GL KSLEEIGR+F VSKEWIRKIE+ ALTK
Sbjct: 469 QHMKNDIHVLLEGLNSREKKVLALRYGLNYCNPKSLEEIGRLFHVSKEWIRKIEKNALTK 528
Query: 191 LRDEDCLKILGHYV 150
LR+E+ K L HY+
Sbjct: 529 LRNEESNKNLSHYL 542
>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
gi|222854562|gb|EEE92109.1| hypothetical protein
POPTR_0006s25090g [Populus trichocarpa]
Length = 559
Score = 340 bits (872), Expect = 4e-91
Identities = 163/255 (63%), Positives = 205/255 (80%)
Frame = -1
Query: 908 GIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAER 729
G+ KK LQQ L +GW+CRDEL+++T SLV++IA+NY G+G+A EDL+QAGN+G+LQGAER
Sbjct: 305 GLDKKVLQQQLQFGWYCRDELIKNTHSLVLYIARNYRGMGIAMEDLIQAGNLGLLQGAER 364
Query: 728 FDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYP 549
FD TRGY+FSTYVQYWIRKSM +V RHARG+++P LS+ IN++QKARK LS S G+YP
Sbjct: 365 FDPTRGYRFSTYVQYWIRKSMLKIVERHARGIQIPYALSRSINKIQKARKALSNSHGRYP 424
Query: 548 DDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIRQ 369
DD E+AKFTGLS+AKI SA KCLRVV S+DQKIGEG KY E PD SI +PEE V+RQ
Sbjct: 425 DDWEVAKFTGLSLAKIESAQKCLRVVASLDQKIGEGHYAKYSEFIPDMSIQNPEEAVMRQ 484
Query: 368 HMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTKL 189
HM ++Y LL GL+ REKQV++LR+G +NQ KSL EIGR+FRVSKE +RKIE+ + KL
Sbjct: 485 HMREEIYDLLRGLDSREKQVMVLRYGFKDNQPKSLAEIGRLFRVSKERVRKIEKKIMIKL 544
Query: 188 RDEDCLKILGHYVYM 144
RDE + L Y+ +
Sbjct: 545 RDEGIRRNLSRYMIL 559
>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323785|gb|EFH54206.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 568
Score = 334 bits (857), Expect = 2e-89
Identities = 162/255 (63%), Positives = 210/255 (82%), Gaps = 1/255 (0%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AG+ +K L ++LHYGW+CRDELL+STRSLV+F+A+NY GLG+A EDL+QAG +GVLQGAE
Sbjct: 312 AGMNEKLLMRNLHYGWYCRDELLKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAE 371
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTG-K 555
RFD TRGYKFSTYVQYWIRKSMS +V+RHARGV +P ++ + INQ+QKARKTL TS G K
Sbjct: 372 RFDHTRGYKFSTYVQYWIRKSMSMMVSRHARGVHIPSSIIRTINQIQKARKTLKTSHGIK 431
Query: 554 YPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVI 375
YP D +I+K T LSV KI +A++CL+VV SI++K+G+ + K++E TPDT++ SPEE V+
Sbjct: 432 YPADEDISKLTSLSVKKIRAANQCLKVVGSIEKKVGDCFSTKFLEFTPDTTMESPEEAVM 491
Query: 374 RQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALT 195
RQ D++ LL GLEPREKQV++LR+GL N + KSLEEIG++ RVSKEWIRKIER A+
Sbjct: 492 RQSARRDIHDLLEGLEPREKQVMVLRYGLQNYRPKSLEEIGKLLRVSKEWIRKIERRAMA 551
Query: 194 KLRDEDCLKILGHYV 150
KLRD+ + L +Y+
Sbjct: 552 KLRDQPNAEDLRYYL 566
>dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
Length = 571
Score = 332 bits (851), Expect = 1e-88
Identities = 161/255 (63%), Positives = 209/255 (81%), Gaps = 1/255 (0%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AG+ +K L ++LHYGW+CRDEL++STRSLV+F+A+NY G+G+A EDL+QAG +GVLQGAE
Sbjct: 315 AGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGMGIAHEDLIQAGYVGVLQGAE 374
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTG-K 555
RFD TRGYKFSTYVQYWIRKSMST+V+RHARGV +P ++ + IN +QKARKTL TS G K
Sbjct: 375 RFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKTLKTSHGIK 434
Query: 554 YPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVI 375
Y D EIAK TG SV KI +A++CL+VV SID+K+G+ K++E TPDT++ SPEE V+
Sbjct: 435 YAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTMESPEEAVM 494
Query: 374 RQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALT 195
RQ D++ LL GLEPREKQV++LR+GL + + KSLEEIG++F+VSKEWIRKIER A+
Sbjct: 495 RQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLFKVSKEWIRKIERRAMA 554
Query: 194 KLRDEDCLKILGHYV 150
KLRD+ + L +Y+
Sbjct: 555 KLRDQPNAEDLRYYL 569
>ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis thaliana]
gi|75098239|sp|O24621.1|SIGC_ARATH RecName: Full=RNA
polymerase sigma factor sigC; Short=Sigma factor C;
Short=Sigma-C; AltName: Full=RNA polymerase sigma factor
sig3; Short=Atsig3; Short=Sigma factor 3; Flags:
Precursor gi|2353175|gb|AAB69386.1| sigma factor 3
[Arabidopsis thaliana] gi|2463554|dbj|BAA22530.1| SigC
[Arabidopsis thaliana] gi|5478585|dbj|BAA82450.1| sigma
factor SigC [Arabidopsis thaliana]
gi|7630012|emb|CAB88354.1| sigma factor SigC [Arabidopsis
thaliana] gi|133778870|gb|ABO38775.1| At3g53920
[Arabidopsis thaliana] gi|332645638|gb|AEE79159.1|
RNApolymerase sigma-subunit C [Arabidopsis thaliana]
Length = 571
Score = 330 bits (847), Expect = 3e-88
Identities = 161/255 (63%), Positives = 208/255 (81%), Gaps = 1/255 (0%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AG+ +K L ++LHYGW+CRDEL++STRSLV+F+A+NY GLG+A EDL+QAG +GVLQGAE
Sbjct: 315 AGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAE 374
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTG-K 555
RFD TRGYKFSTYVQYWIRKSMST+V+RHARGV +P ++ + IN +QKARKTL TS G K
Sbjct: 375 RFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKTLKTSHGIK 434
Query: 554 YPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVI 375
Y D EIAK TG SV KI +A++CL+VV SID+K+G+ K++E TPDT++ SPEE V+
Sbjct: 435 YAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTMESPEEAVM 494
Query: 374 RQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALT 195
RQ D++ LL GLEPREKQV++LR+GL + + KSLEEIG++ +VSKEWIRKIER A+
Sbjct: 495 RQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLKVSKEWIRKIERRAMA 554
Query: 194 KLRDEDCLKILGHYV 150
KLRD+ + L +Y+
Sbjct: 555 KLRDQPNAEDLRYYL 569
>gb|AAM91534.1| sigma factor SigC [Arabidopsis thaliana]
Length = 291
Score = 330 bits (847), Expect = 3e-88
Identities = 161/255 (63%), Positives = 208/255 (81%), Gaps = 1/255 (0%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AG+ +K L ++LHYGW+CRDEL++STRSLV+F+A+NY GLG+A EDL+QAG +GVLQGAE
Sbjct: 35 AGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAE 94
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTG-K 555
RFD TRGYKFSTYVQYWIRKSMST+V+RHARGV +P ++ + IN +QKARKTL TS G K
Sbjct: 95 RFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKTLKTSHGIK 154
Query: 554 YPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVI 375
Y D EIAK TG SV KI +A++CL+VV SID+K+G+ K++E TPDT++ SPEE V+
Sbjct: 155 YAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTMESPEEAVM 214
Query: 374 RQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALT 195
RQ D++ LL GLEPREKQV++LR+GL + + KSLEEIG++ +VSKEWIRKIER A+
Sbjct: 215 RQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLKVSKEWIRKIERRAMA 274
Query: 194 KLRDEDCLKILGHYV 150
KLRD+ + L +Y+
Sbjct: 275 KLRDQPNAEDLRYYL 289
>ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Capsella rubella]
gi|482559522|gb|EOA23713.1| hypothetical protein
CARUB_v10016920mg [Capsella rubella]
Length = 581
Score = 328 bits (841), Expect = 2e-87
Identities = 160/255 (62%), Positives = 207/255 (81%), Gaps = 1/255 (0%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AG+ +K L ++LHYGW+CRDELL+STRSLV+F+A+NY GLG+A EDL+QAG +GVLQGAE
Sbjct: 325 AGMNEKLLMRNLHYGWYCRDELLKSTRSLVLFLARNYRGLGIAHEDLIQAGFVGVLQGAE 384
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTG-K 555
RFD RGYKFSTYVQYWIRKSMS +V+RHARGV +P ++ + INQ+QKARKTL TS G K
Sbjct: 385 RFDHARGYKFSTYVQYWIRKSMSMMVSRHARGVHIPSSIIRTINQIQKARKTLKTSHGIK 444
Query: 554 YPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVI 375
YP D EI+K T LSV KI +A++CL+VV SI+ K+G+ + K++E TPDT + SPEE V+
Sbjct: 445 YPADEEISKLTSLSVKKIRAANQCLKVVGSIENKVGDCFSTKFLEFTPDTMMESPEEAVM 504
Query: 374 RQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALT 195
RQ D++ LL GLEPREKQV++LR+GL + + KSLEEIG++ RVSKEWIR+IER A+
Sbjct: 505 RQSARRDLHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLRVSKEWIRRIERRAMA 564
Query: 194 KLRDEDCLKILGHYV 150
KLRD+ + L +Y+
Sbjct: 565 KLRDQPNAEDLRYYL 579
>ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutrema salsugineum]
gi|312281919|dbj|BAJ33825.1| unnamed protein product
[Thellungiella halophila] gi|557104759|gb|ESQ45093.1|
hypothetical protein EUTSA_v10010251mg [Eutrema
salsugineum]
Length = 562
Score = 324 bits (831), Expect = 2e-86
Identities = 159/255 (62%), Positives = 207/255 (81%), Gaps = 1/255 (0%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AG+ + L ++LHYGW+CRDELL+STRSLV+F+++NY GLG+A EDL+QAGN+GVLQGAE
Sbjct: 306 AGMNEILLMRNLHYGWYCRDELLKSTRSLVLFLSRNYRGLGIAHEDLIQAGNVGVLQGAE 365
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTG-K 555
RFD TRGYKFSTYVQYWIRKSMS +V+RHARGV +P ++ + ++Q+QKARKTL TS G K
Sbjct: 366 RFDHTRGYKFSTYVQYWIRKSMSMMVSRHARGVYIPSSVIRTMSQIQKARKTLKTSHGIK 425
Query: 554 YPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVI 375
YP D EI+K TG S+ KI +A++CL+VV SID+K+G+ K++E TPDT++ SPEE V+
Sbjct: 426 YPADEEISKETGYSLKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTMESPEEAVM 485
Query: 374 RQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALT 195
RQ DV+ LL GLEPREKQV++LR+GL + KSLEEIG++ +VSKEWIRKIER A+
Sbjct: 486 RQSAWRDVHDLLQGLEPREKQVMVLRYGLQGFRPKSLEEIGKLLKVSKEWIRKIERRAMA 545
Query: 194 KLRDEDCLKILGHYV 150
KLRD+ + L Y+
Sbjct: 546 KLRDQANAENLRFYL 560
>emb|CAD20832.1| sigma factor [Spinacia oleracea]
Length = 548
Score = 323 bits (827), Expect = 7e-86
Identities = 158/254 (62%), Positives = 203/254 (79%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AGI +K LQ LH+GW+CRDELL+S RSLV+++++ Y GLGVA EDL+QAGN+G+LQGAE
Sbjct: 294 AGIDEKVLQHDLHFGWYCRDELLKSGRSLVLYLSRYYRGLGVAHEDLMQAGNIGILQGAE 353
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKY 552
RFD TRGY+FSTYVQYWIRK+MS LV+RH RG++VP TLS IN+VQKARK L S GK+
Sbjct: 354 RFDHTRGYQFSTYVQYWIRKAMSQLVSRHGRGIKVPTTLSTTINRVQKARKILKRSQGKH 413
Query: 551 PDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIR 372
PDD E++K TGLS+ KI SA CLR+V S+DQK+G IN+KY+E TPDT++ PE+TV++
Sbjct: 414 PDDVEVSKSTGLSLDKIKSADNCLRIVGSLDQKVGHFINMKYLECTPDTALEMPEKTVMK 473
Query: 371 QHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTK 192
QHM +DV+ LL L+P+E++V+I R+GL SL E+G+VF VSKEWIRK+E+ ALTK
Sbjct: 474 QHMRNDVHKLLQELDPKERRVLIHRYGL-EGHCMSLHEVGKVFDVSKEWIRKMEKRALTK 532
Query: 191 LRDEDCLKILGHYV 150
LR E L HY+
Sbjct: 533 LRTEQNQTNLKHYL 546
>emb|CAB83107.1| sigma factor 3 [Sinapis alba]
Length = 567
Score = 319 bits (817), Expect = 1e-84
Identities = 155/255 (60%), Positives = 205/255 (80%), Gaps = 1/255 (0%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
AG+ +K L +LH+GW+CRDEL++STRSLV+F+A+NY GLG+A EDL+QAG +GVLQGAE
Sbjct: 311 AGMNQKLLMHNLHFGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAE 370
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTG-K 555
RFD TRGYKFSTYV+YWIRKSMST+V+RHARGV +P ++ + ++Q+QKARKTL TS G K
Sbjct: 371 RFDHTRGYKFSTYVRYWIRKSMSTMVSRHARGVHIPASIIRTMSQIQKARKTLKTSQGIK 430
Query: 554 YPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVI 375
YP D EI+K TG S+ KI +A++CL+VV SID+K+G+ +++E TPD ++ SPEE V+
Sbjct: 431 YPADEEISKLTGYSLKKIRAANQCLKVVGSIDKKVGDCFTTRFLEFTPDPTMESPEEAVM 490
Query: 374 RQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALT 195
RQ +V+ LL GLEPREKQV++LR+GL + KSLEEIG++ RVSKE IRKIER A+
Sbjct: 491 RQSARGEVHNLLEGLEPREKQVMVLRYGLQDYSPKSLEEIGKILRVSKEGIRKIERRAMA 550
Query: 194 KLRDEDCLKILGHYV 150
KLRD+ L +Y+
Sbjct: 551 KLRDQPKADNLRYYL 565
>gb|EPS65656.1| hypothetical protein M569_09119, partial [Genlisea aurea]
Length = 463
Score = 317 bits (813), Expect = 3e-84
Identities = 151/244 (61%), Positives = 197/244 (80%), Gaps = 2/244 (0%)
Frame = -1
Query: 911 AGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAE 732
A I+ KEL++ L+YGWHCRD+LL+S+RSLV+FIA+NYWGLG+AFEDL+QAGNM VL+GAE
Sbjct: 216 ARIESKELKRRLNYGWHCRDQLLKSSRSLVVFIARNYWGLGIAFEDLIQAGNMAVLRGAE 275
Query: 731 RFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKY 552
RFDQ+RGYKFSTYVQYWIRKSMS LVA H+RG+R+P T++KVINQVQ ARK L +TG+
Sbjct: 276 RFDQSRGYKFSTYVQYWIRKSMSMLVANHSRGIRIPGTMNKVINQVQNARKQLCAATGRT 335
Query: 551 PDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIR 372
P D E+AK TG+S+ +I SA +C RVV S+D+++G ME+T D SI SPEE +R
Sbjct: 336 PSDLEVAKLTGISLERIRSAGRCPRVVGSVDRRVGNPPGTLLMEVTADESICSPEEAAVR 395
Query: 371 QHMIHDVYTLLNGLEPREKQVIILRFGLG--NNQRKSLEEIGRVFRVSKEWIRKIERTAL 198
+ DV ++ GLE RE++V++LRFGLG + ++KSL+EIG++ VSKEW+R+IE TAL
Sbjct: 396 EERARDVERMVRGLEWREREVLVLRFGLGRRDGEKKSLQEIGKILCVSKEWVRRIETTAL 455
Query: 197 TKLR 186
KLR
Sbjct: 456 AKLR 459