BLASTX nr result

ID: Rehmannia25_contig00018231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00018231
         (827 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301904.1| PREDICTED: uncharacterized protein LOC101292...    79   3e-12
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    68   3e-09
ref|XP_004292086.1| PREDICTED: uncharacterized protein LOC101295...    61   4e-07

>ref|XP_004301904.1| PREDICTED: uncharacterized protein LOC101292910 [Fragaria vesca
           subsp. vesca]
          Length = 851

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
 Frame = -3

Query: 294 MNCFYWNIRGIGNIASRNILKKLCNNHKPSLVAIAEPKVDLHSISDSYWASLGLQFVAQN 115
           M  FYWN+RGI N  ++N  K+   +H   ++ IAEP V L SI  S+W +LG+QF+  N
Sbjct: 1   MKIFYWNLRGIANDPTQNAFKEFVRSHSLEILCIAEPFVALESIPASFWRNLGMQFIGAN 60

Query: 114 FRVSGKSDIWIF-RRSDITILQQVFISDQCIILKVQFSN 1
            R S + ++W+F + S +  ++ ++ SDQ + L+V F +
Sbjct: 61  DRGSQQPNLWVFCKISLVPWVRVLYSSDQQVSLQVMFDS 99


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 33/94 (35%), Positives = 53/94 (56%)
 Frame = -3

Query: 294 MNCFYWNIRGIGNIASRNILKKLCNNHKPSLVAIAEPKVDLHSISDSYWASLGLQFVAQN 115
           M   YW +RGI N+ ++  LK   N HKP L+ +AEP +   S+   YW S+G+     N
Sbjct: 1   MIILYWTVRGIDNVDTKIALKNFFNCHKPLLIFVAEPMIAFESVPPWYWDSIGVSKYCVN 60

Query: 114 FRVSGKSDIWIFRRSDITILQQVFISDQCIILKV 13
            R   + ++W     +++ +  +FISDQCI L++
Sbjct: 61  GREILQPNLWALWGREVSAI-VMFISDQCIALEI 93


>ref|XP_004292086.1| PREDICTED: uncharacterized protein LOC101295596 [Fragaria vesca
           subsp. vesca]
          Length = 370

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
 Frame = -3

Query: 294 MNCFYWNIRGIGNIASRNILKKLCNNHKPSLVAIAEPKVDLHSISDSYWASLGLQFVAQN 115
           M  FYWN+R I N  ++++L+K   +H   ++ IAEP V L SI   +W S+ L  V+ N
Sbjct: 1   MKIFYWNLRRIANDPTQDLLRKFVQDHHLDVLCIAEPFVSLDSIPSQFWMSMNLVEVSTN 60

Query: 114 FRVSGKSDIWIF-RRSDITILQQVFISDQCIILKV 13
              +  S++W+F + S + ++  V  +DQ + + V
Sbjct: 61  DWGAALSNLWMFCKPSLLHVINVVSRTDQQVTITV 95


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