BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00018194
         (1515 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS58483.1| hypothetical protein M569_16331, partial [Genlise...   823   0.0  
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su...   822   0.0  
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su...   820   0.0  
ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su...   813   0.0  
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   813   0.0  
ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su...   805   0.0  
ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su...   805   0.0  
ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II su...   805   0.0  
ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II su...   805   0.0  
ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citr...   805   0.0  
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...   804   0.0  
gb|EOX90741.1| DNA-directed RNA polymerase II subunit RPB1 isofo...   803   0.0  
ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II su...   802   0.0  
ref|XP_006383037.1| DNA-directed RNA polymerase II largest subun...   802   0.0  
ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II su...   799   0.0  
gb|ESW29856.1| hypothetical protein PHAVU_002G104500g [Phaseolus...   798   0.0  
ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II su...   795   0.0  
ref|XP_006412058.1| hypothetical protein EUTSA_v10024193mg [Eutr...   787   0.0  
gb|EMJ04257.1| hypothetical protein PRUPE_ppa000093mg [Prunus pe...   787   0.0  
ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su...   786   0.0  

>gb|EPS58483.1| hypothetical protein M569_16331, partial [Genlisea aurea]
          Length = 652

 Score =  823 bits (2127), Expect = 0.0
 Identities = 405/439 (92%), Positives = 421/439 (95%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MDLRFP+SPAEV+K+RVVQFGILSPDEIRQMSVVHIEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVSKIRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILR VCFNCSKIL DEE+P 
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILVDEEEPA 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 779
            FKQ+MRIRNPKNRLRKILDACKNKSKCEGGDEIDVQG DSE P+K+SRGGCGAQ+PKISI
Sbjct: 121  FKQSMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGADSEEPVKRSRGGCGAQKPKISI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            DGMKMVAEYK QKK+ND+ EQMPEPVERKQ+LSAEKVLSILKRITDEDCQLLGLNPKYAR
Sbjct: 181  DGMKMVAEYKFQKKRNDEQEQMPEPVERKQILSAEKVLSILKRITDEDCQLLGLNPKYAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLK+QE NG+ AHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQEHNGSAAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            DDGQRLDLRYLKKSSDQHL
Sbjct: 421  DDGQRLDLRYLKKSSDQHL 439


>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum
            lycopersicum]
          Length = 1846

 Score =  822 bits (2124), Expect = 0.0
 Identities = 404/439 (92%), Positives = 421/439 (95%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MDLRFPFSPAEVAKVR VQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 779
            FKQAMRIRNPKNRLRK+LDACKNK+KCEGGDEIDVQGQD+E P+KKSRGGCGAQQPKISI
Sbjct: 121  FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKISI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            DGMKMVAEYK+QKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP++AR
Sbjct: 181  DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDWMILQ L        PSVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241  PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            DDGQRLDLRYLKKSSDQHL
Sbjct: 421  DDGQRLDLRYLKKSSDQHL 439


>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
            tuberosum]
          Length = 1839

 Score =  820 bits (2119), Expect = 0.0
 Identities = 403/439 (91%), Positives = 420/439 (95%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MDLRFPFSPAEVAKVR VQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61   DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 779
            FKQAMRIRNPKNRLRK+LDACKNK+KCEGGDEIDVQG D+E P+KKSRGGCGAQQPKISI
Sbjct: 121  FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGHDTEEPVKKSRGGCGAQQPKISI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            DGMKMVAEYK+QKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP++AR
Sbjct: 181  DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDWMILQ L        PSVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241  PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            DDGQRLDLRYLKKSSDQHL
Sbjct: 421  DDGQRLDLRYLKKSSDQHL 439


>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis
            sativus]
          Length = 1853

 Score =  813 bits (2100), Expect = 0.0
 Identities = 397/439 (90%), Positives = 418/439 (95%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MDLRFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK+ GLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+I+RSVCFNCSKIL DEEDPK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 779
            FKQA+RI+NPKNRLRKILDACKNK+KCEGGDEIDVQGQDS+ P+KKSRGGCGAQQPKISI
Sbjct: 121  FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            +GMKM AEYK Q+KKNDDPEQ+PEPVERKQ L+AE+VL ILKRITDEDC+LLGLNPKYAR
Sbjct: 181  EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            DDGQRLDLRYLKKSSD HL
Sbjct: 421  DDGQRLDLRYLKKSSDHHL 439


>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit RPB1-like [Cucumis sativus]
          Length = 1832

 Score =  813 bits (2100), Expect = 0.0
 Identities = 397/439 (90%), Positives = 418/439 (95%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MDLRFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK+ GLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+I+RSVCFNCSKIL DEEDPK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 779
            FKQA+RI+NPKNRLRKILDACKNK+KCEGGDEIDVQGQDS+ P+KKSRGGCGAQQPKISI
Sbjct: 121  FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            +GMKM AEYK Q+KKNDDPEQ+PEPVERKQ L+AE+VL ILKRITDEDC+LLGLNPKYAR
Sbjct: 181  EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            DDGQRLDLRYLKKSSD HL
Sbjct: 421  DDGQRLDLRYLKKSSDHHL 439


>ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5
            [Citrus sinensis]
          Length = 1963

 Score =  805 bits (2079), Expect = 0.0
 Identities = 393/439 (89%), Positives = 416/439 (94%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+RSVCFNCSKILADE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 779
            FKQA++IRNPKNRL+KILDACKNK+KCEGGDEIDV GQD E PLKK++GGCGAQQPK++I
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            +GMKM+AEYK Q+KKNDD EQ+PEPVERKQ L+AE+VL +LKRI+DEDCQLLGLNPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            DDGQRLDLRYLKKSSD HL
Sbjct: 421  DDGQRLDLRYLKKSSDHHL 439


>ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4
            [Citrus sinensis]
          Length = 1853

 Score =  805 bits (2079), Expect = 0.0
 Identities = 393/439 (89%), Positives = 416/439 (94%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+RSVCFNCSKILADE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 779
            FKQA++IRNPKNRL+KILDACKNK+KCEGGDEIDV GQD E PLKK++GGCGAQQPK++I
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            +GMKM+AEYK Q+KKNDD EQ+PEPVERKQ L+AE+VL +LKRI+DEDCQLLGLNPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            DDGQRLDLRYLKKSSD HL
Sbjct: 421  DDGQRLDLRYLKKSSDHHL 439


>ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X3
            [Citrus sinensis]
          Length = 1790

 Score =  805 bits (2079), Expect = 0.0
 Identities = 393/439 (89%), Positives = 416/439 (94%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+RSVCFNCSKILADE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 779
            FKQA++IRNPKNRL+KILDACKNK+KCEGGDEIDV GQD E PLKK++GGCGAQQPK++I
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            +GMKM+AEYK Q+KKNDD EQ+PEPVERKQ L+AE+VL +LKRI+DEDCQLLGLNPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            DDGQRLDLRYLKKSSD HL
Sbjct: 421  DDGQRLDLRYLKKSSDHHL 439


>ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
            [Citrus sinensis] gi|568825318|ref|XP_006467028.1|
            PREDICTED: DNA-directed RNA polymerase II subunit 1-like
            isoform X2 [Citrus sinensis]
          Length = 1860

 Score =  805 bits (2079), Expect = 0.0
 Identities = 393/439 (89%), Positives = 416/439 (94%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+RSVCFNCSKILADE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 779
            FKQA++IRNPKNRL+KILDACKNK+KCEGGDEIDV GQD E PLKK++GGCGAQQPK++I
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            +GMKM+AEYK Q+KKNDD EQ+PEPVERKQ L+AE+VL +LKRI+DEDCQLLGLNPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            DDGQRLDLRYLKKSSD HL
Sbjct: 421  DDGQRLDLRYLKKSSDHHL 439


>ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citrus clementina]
            gi|557527347|gb|ESR38597.1| hypothetical protein
            CICLE_v10024686mg [Citrus clementina]
          Length = 1860

 Score =  805 bits (2078), Expect = 0.0
 Identities = 393/439 (89%), Positives = 415/439 (94%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+RSVCFNCSKILADE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 779
            FKQA++IRNPKNRL+KILDACKNK+KCEGGDEIDV GQD E PLKK +GGCGAQQPK++I
Sbjct: 121  FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKKKGGCGAQQPKLTI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            +GMKM+AEYK Q+KKNDD EQ+PEPVERKQ L+AE+VL +LKRI+DEDCQLLGLNPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            DDGQRLDLRYLKKSSD HL
Sbjct: 421  DDGQRLDLRYLKKSSDHHL 439


>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
            vinifera]
          Length = 1848

 Score =  804 bits (2077), Expect = 0.0
 Identities = 394/439 (89%), Positives = 417/439 (94%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MD+RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEED K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 779
            FKQA +IRNPKNRL+KILDACKNKSKCEGGDEI+ Q  DS EP+KKSRGGCGAQQPK++I
Sbjct: 121  FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            +GMKM+AEYK+Q+KKNDDPEQ+PEPVERKQ LSAE+VL++LKRI+DEDC LLGLNPKYAR
Sbjct: 181  EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            +DGQRLDLRYLKKSSD HL
Sbjct: 421  EDGQRLDLRYLKKSSDHHL 439


>gb|EOX90741.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
            cacao] gi|508698846|gb|EOX90742.1| DNA-directed RNA
            polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
            gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
            II subunit RPB1 isoform 1 [Theobroma cacao]
          Length = 1861

 Score =  803 bits (2073), Expect = 0.0
 Identities = 392/439 (89%), Positives = 417/439 (94%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MDLRFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK+GGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEE+ K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 779
            FKQA++I+NPKNRL+KILDACKNKSKCEGGDEIDVQGQD+E P+KKSRGGCGAQQPK+SI
Sbjct: 121  FKQALKIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            DGMKM+AEYK Q+K+NDD EQ+PEPVERKQ L+AE+VLS+LKRI+DEDCQLLGLNPK+AR
Sbjct: 181  DGMKMIAEYKPQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKFAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDWMILQVL        PSVMMDTS+RSEDDLTH LAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFHVATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            DDGQRLDLRYLKKSSD HL
Sbjct: 421  DDGQRLDLRYLKKSSDHHL 439


>ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Glycine
            max]
          Length = 1827

 Score =  802 bits (2072), Expect = 0.0
 Identities = 391/439 (89%), Positives = 416/439 (94%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MD+RFPFSPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK+GGLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRK+KCETC A+MAECPGHFGHLELAKPMFHIGF+KTVL+I+R VCFNCSKILADE D K
Sbjct: 61   DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 779
            FKQA+RIRNPKNRL+KILDACKNKSKCEGGDEID+ GQD+ EP+KKSRGGCGAQQPKI+I
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            +GMKM+AEYK Q+KK+DD EQ+PEPVERKQ LSAE+VL +LKRI+DEDCQLLGLNPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            DDGQRLDLRYLKKSSD HL
Sbjct: 421  DDGQRLDLRYLKKSSDHHL 439


>ref|XP_006383037.1| DNA-directed RNA polymerase II largest subunit family protein
            [Populus trichocarpa] gi|550338614|gb|ERP60834.1|
            DNA-directed RNA polymerase II largest subunit family
            protein [Populus trichocarpa]
          Length = 1837

 Score =  802 bits (2071), Expect = 0.0
 Identities = 391/439 (89%), Positives = 420/439 (95%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSV+ IEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1    MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEED K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 779
            FKQA++I+NPK+RL+KILDACKNK+KCEGGDEIDVQGQD+E P+KKSRGGCGAQQPK++I
Sbjct: 121  FKQALKIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDNEEPVKKSRGGCGAQQPKLTI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            +GMKM+AEYK+Q+KK+DD EQ+PEPVERKQ L+AE+VLS+LKRI+DEDCQLLGL+PKYAR
Sbjct: 181  EGMKMIAEYKVQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENL+RQER+GAPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERSGAPAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            DDGQRLDLRYLKKSSD HL
Sbjct: 421  DDGQRLDLRYLKKSSDHHL 439


>ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
            [Glycine max] gi|571435633|ref|XP_006573537.1| PREDICTED:
            DNA-directed RNA polymerase II subunit 1-like isoform X2
            [Glycine max]
          Length = 1827

 Score =  799 bits (2064), Expect = 0.0
 Identities = 390/439 (88%), Positives = 415/439 (94%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MD+RFPFSPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK+GGLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRK+KCETC A+MAECPGHFGHLELAKPMFHIGF+KTVL+I+R VCFNCSKILADE D K
Sbjct: 61   DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSEP-LKKSRGGCGAQQPKISI 779
            FKQA+RIRNPKNRL+KILDACKNKSKCEGGDEID+ GQD+E  +KKSRGGCGAQQPKI+I
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTEESVKKSRGGCGAQQPKITI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            +GMKM+AEYK Q+KK+DD EQ+PEPVERKQ LSAE+VL +LKRI+DEDCQLLGLNPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            DDGQRLDLRYLKKSSD HL
Sbjct: 421  DDGQRLDLRYLKKSSDHHL 439


>gb|ESW29856.1| hypothetical protein PHAVU_002G104500g [Phaseolus vulgaris]
          Length = 1834

 Score =  798 bits (2062), Expect = 0.0
 Identities = 389/439 (88%), Positives = 415/439 (94%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MD+RFPFSPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK+ GLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRK+KCETC A+MAECPGHFGHLELAKPMFHIGF+KTVL+I+R VCFNCSKILADE D K
Sbjct: 61   DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 779
            FKQA+RIRNPKNRL+KILDACKNKSKCEGGDEID+ GQD+ EP+KKSRGGCGAQQPKI+I
Sbjct: 121  FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            +GMK++AEYK Q+KK+DD EQ+PEPVERKQ LSAE+VL +LKRI+DEDCQLLGLNPKYAR
Sbjct: 181  EGMKIIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            DDGQRLDLRYLKKSSD HL
Sbjct: 421  DDGQRLDLRYLKKSSDHHL 439


>ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cicer
            arietinum]
          Length = 1834

 Score =  795 bits (2054), Expect = 0.0
 Identities = 388/439 (88%), Positives = 416/439 (94%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MD+RFPFSPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPKIGGLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKIGGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRKMKCETC A+MAECPGHFG+LELAKPMFHIGF+KTVLSI+R VCFNCSKILADE+D K
Sbjct: 61   DRKMKCETCTASMAECPGHFGYLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEQDHK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 779
            FKQA+RI++PKNRLRKILDACKNK+KCEGGD+ID+ G D+E P+KKSRGGCGAQQPKI+I
Sbjct: 121  FKQALRIKSPKNRLRKILDACKNKTKCEGGDDIDMPGHDTEEPVKKSRGGCGAQQPKITI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            +GMKM+AEYK Q+KK+DD EQ+PEPVERKQ LSAE+VL +LKRI+DEDCQLLGLNPKYAR
Sbjct: 181  EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDW+ILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNG+PAHIIS
Sbjct: 241  PDWLILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            DDGQRLDLRYLKKSSD HL
Sbjct: 421  DDGQRLDLRYLKKSSDHHL 439


>ref|XP_006412058.1| hypothetical protein EUTSA_v10024193mg [Eutrema salsugineum]
            gi|557113228|gb|ESQ53511.1| hypothetical protein
            EUTSA_v10024193mg [Eutrema salsugineum]
          Length = 1837

 Score =  787 bits (2033), Expect = 0.0
 Identities = 380/440 (86%), Positives = 414/440 (94%), Gaps = 2/440 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MD RFPFSPAEV+KVRVVQFGILSPDEIRQMSV+H+EHSETTE+GKPK+GGLSD RLGTI
Sbjct: 1    MDTRFPFSPAEVSKVRVVQFGILSPDEIRQMSVIHVEHSETTEKGKPKVGGLSDIRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRK+KCETCMANMAECPGHFGHLELAKPMFH+GFMKTVLSI+R VCFNCSKILADEED K
Sbjct: 61   DRKVKCETCMANMAECPGHFGHLELAKPMFHVGFMKTVLSIMRCVCFNCSKILADEEDHK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEID-VQGQDS-EPLKKSRGGCGAQQPKIS 782
            FKQAM+I+NPKNRL+KILDACKNK+KCEGGDEID VQ QD+ EP+KKSRGGCGAQQPK++
Sbjct: 121  FKQAMKIKNPKNRLKKILDACKNKTKCEGGDEIDDVQNQDTDEPVKKSRGGCGAQQPKLT 180

Query: 781  IDGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYA 602
            I+GMKM AEYK+ +KK D+P+Q+PEP ERKQ L A++VLS+LKRI+DEDCQLLG NPKYA
Sbjct: 181  IEGMKMTAEYKITRKKTDEPDQLPEPAERKQTLGADRVLSVLKRISDEDCQLLGFNPKYA 240

Query: 601  RPDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHII 422
            RPDWMIL+VL        PSVMMD ++RSEDDLTHQLAMIIRHNENLKRQE+NGAPAHII
Sbjct: 241  RPDWMILEVLPIPPPPVRPSVMMDATSRSEDDLTHQLAMIIRHNENLKRQEKNGAPAHII 300

Query: 421  SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 242
            SEF QLLQFH+ATYFDNELPGQPRATQ+SGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  SEFTQLLQFHIATYFDNELPGQPRATQKSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 241  RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYII 62
            RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELV+ GPHPPPGKTGAKYII
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKTGAKYII 420

Query: 61   RDDGQRLDLRYLKKSSDQHL 2
            RDDGQRLDLRYLKKSSD HL
Sbjct: 421  RDDGQRLDLRYLKKSSDHHL 440


>gb|EMJ04257.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica]
          Length = 1844

 Score =  787 bits (2033), Expect = 0.0
 Identities = 387/439 (88%), Positives = 411/439 (93%), Gaps = 1/439 (0%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MD+RFPFSPAEVAKVR VQFGILSPDEIRQMSVV IEHSET   GKPK  GLSDPRLGTI
Sbjct: 1    MDIRFPFSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKIL DE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 779
            FKQA+RI++PKNRL+KILDACKNK+KC+GGDEIDVQGQ+SE P+KKSRGGCGAQQPK+SI
Sbjct: 121  FKQALRIKSPKNRLKKILDACKNKTKCDGGDEIDVQGQESEEPVKKSRGGCGAQQPKLSI 180

Query: 778  DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 599
            +GMKM AEYK Q+KK+DD EQ+PEPVERKQ L+AE+VLS+LKRI+DED QLLGLNPKYAR
Sbjct: 181  EGMKMNAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQLLGLNPKYAR 240

Query: 598  PDWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 419
            PDWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNG+PAHIIS
Sbjct: 241  PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 418  EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 239
            EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 238  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 59
            TVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420

Query: 58   DDGQRLDLRYLKKSSDQHL 2
            DDGQRLDLRYLKKSSD HL
Sbjct: 421  DDGQRLDLRYLKKSSDHHL 439


>ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Fragaria
            vesca subsp. vesca]
          Length = 1842

 Score =  786 bits (2029), Expect = 0.0
 Identities = 387/438 (88%), Positives = 407/438 (92%)
 Frame = -3

Query: 1315 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 1136
            MD+RFPFSP EVAKVR VQFGILSPDEIRQMSVV IEHSET   GKPK  GLSDPRLGTI
Sbjct: 1    MDIRFPFSPCEVAKVRRVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60

Query: 1135 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 956
            DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKIL DE+D K
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120

Query: 955  FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSEPLKKSRGGCGAQQPKISID 776
            FK A+RI+NPKNRL+KILDACKNK+KCEGGDEIDVQ  D EPLKKSRGGCGAQQPK++ID
Sbjct: 121  FKTALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQDTD-EPLKKSRGGCGAQQPKLTID 179

Query: 775  GMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYARP 596
            GMKMVAEYK Q+KK+DD EQ+PEPVERKQ L+AE+VLS+LKRI+DEDCQLLGLNPKYARP
Sbjct: 180  GMKMVAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYARP 239

Query: 595  DWMILQVLXXXXXXXXPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISE 416
            DWMILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNG+PAHIISE
Sbjct: 240  DWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISE 299

Query: 415  FAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSART 236
            FAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSART
Sbjct: 300  FAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSART 359

Query: 235  VITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRD 56
            VITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIRD
Sbjct: 360  VITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRD 419

Query: 55   DGQRLDLRYLKKSSDQHL 2
            DGQRLDLRYLKKSSD HL
Sbjct: 420  DGQRLDLRYLKKSSDHHL 437