BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00018175
         (1069 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-...   271   3e-70
ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-...   270   9e-70
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   268   4e-69
ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-...   263   9e-68
gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]        257   5e-66
gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus pe...   256   8e-66
ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-...   250   6e-64
gb|EOY23169.1| DNA mismatch repair protein MSH3 isoform 1 [Theob...   248   2e-63
gb|ESW15390.1| hypothetical protein PHAVU_007G069100g [Phaseolus...   244   3e-62
gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis]     243   9e-62
ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis t...   241   4e-61
dbj|BAD94621.1| putative DNA mismatch repair protein [Arabidopsi...   241   4e-61
ref|XP_006283020.1| hypothetical protein CARUB_v10004012mg [Caps...   239   2e-60
ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-...   238   4e-60
ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-...   238   4e-60
ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-...   238   4e-60
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [...   235   3e-59
ref|XP_006413297.1| hypothetical protein EUTSA_v10024274mg [Eutr...   234   6e-59
ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arab...   233   1e-58
ref|XP_004960023.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch...   224   6e-56

>ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum tuberosum]
          Length = 1117

 Score =  271 bits (693), Expect = 3e-70
 Identities = 138/246 (56%), Positives = 176/246 (71%), Gaps = 2/246 (0%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQ G+STFLEELSEAS IL+ C+  SLVI+DELGRGTSTHDGVAIAYATL YLLEHK
Sbjct: 871  SDSIQQGRSTFLEELSEASDILKKCSANSLVILDELGRGTSTHDGVAIAYATLQYLLEHK 930

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLY 361
            +CMVLFVTHYPEI  I N+FPGSVG YHVSYLT  ++ N DF   ++MD +N +D+TYLY
Sbjct: 931  KCMVLFVTHYPEIVSITNKFPGSVGPYHVSYLTSQRDVNWDFKSNEKMDHINSEDITYLY 990

Query: 362  KLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMP--IDK 535
            KL  GVS RSFGFKVAQLAQLP +CI+RA+ +AA+LE  VC   + ++  +CS+    D 
Sbjct: 991  KLAPGVSGRSFGFKVAQLAQLPVACIQRAIEIAAKLEAAVCNYTEQQIRRSCSLSHRQDG 1050

Query: 536  SEDAEKDAYLPQNCLQTAPIETLEEVEKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSL 715
             ++   +  L  + L    +E L+++ + YR+LF  LN     E    +R   L  A+SL
Sbjct: 1051 CKNEPTEDVLESDSLSAGRVEGLDDISELYRELFLNLNFGFLEEHGDDRRLQFLMQARSL 1110

Query: 716  ANKLLN 733
            A +L++
Sbjct: 1111 AAQLIS 1116


>ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum
            lycopersicum]
          Length = 1117

 Score =  270 bits (689), Expect = 9e-70
 Identities = 138/246 (56%), Positives = 177/246 (71%), Gaps = 2/246 (0%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQ G+STFLEELSEAS IL+ C+  SLVI+DELGRGTSTHDGVAIAYATL YLLEHK
Sbjct: 871  SDSIQQGRSTFLEELSEASDILRKCSANSLVILDELGRGTSTHDGVAIAYATLQYLLEHK 930

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLY 361
            +CMVLFVTHYPEI  I+N+FPGSVG YHVSYLT  ++ N DF   ++MD +N +D+TYLY
Sbjct: 931  KCMVLFVTHYPEIVSIKNKFPGSVGPYHVSYLTSQRDVNGDFKSNEKMDHINGEDITYLY 990

Query: 362  KLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMP--IDK 535
            KL  GVS RSFGFKVAQLAQLP +CI++A+ +AA+LE  VC   + +   +CS+    D 
Sbjct: 991  KLAPGVSGRSFGFKVAQLAQLPVTCIQQAIVIAAKLEAAVCNYTEQQFRRSCSLSHRQDG 1050

Query: 536  SEDAEKDAYLPQNCLQTAPIETLEEVEKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSL 715
             ++   +  L  + L    +E L+++ + YR+LF  LN A   E    +R   L  A+SL
Sbjct: 1051 CKNEPTEDVLESDSLSAGIVEGLDDISELYRELFMNLNYAYLEEHGNDRRLQFLMQARSL 1110

Query: 716  ANKLLN 733
            A +L++
Sbjct: 1111 AAQLIS 1116


>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  268 bits (684), Expect = 4e-69
 Identities = 148/261 (56%), Positives = 179/261 (68%), Gaps = 7/261 (2%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQ G+STFLEELSEASHI+ +CT RSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK
Sbjct: 870  SDSIQQGRSTFLEELSEASHIIHNCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 929

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKETNLDFNV-------EQEMDTVNH 340
            RCMVLFVTHYP+I D++NEFPGSVGAYHVSY+   +  ++D +        ++   T++H
Sbjct: 930  RCMVLFVTHYPKIVDVKNEFPGSVGAYHVSYMMSQRAMDMDTDTDKTDSKSDKNAQTMDH 989

Query: 341  DDVTYLYKLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCS 520
            +DVTYLYKLV GVSERSFGFKVAQLAQLPSSCIRRA  MAA LE  +  R KN  +    
Sbjct: 990  EDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRANVMAAELEAMIVSRVKNSSAQK-- 1047

Query: 521  MPIDKSEDAEKDAYLPQNCLQTAPIETLEEVEKAYRDLFFYLNLALHNEEDVAKRFNSLK 700
                  + +++   +   C +    E +   E A R+ F  L  AL N  D  +    LK
Sbjct: 1048 ----TLQGSQQSISIQSGCSRA---EQIGLEEDACREFFLDLKSALGN-ADPERSLQFLK 1099

Query: 701  HAKSLANKLLNSESV*RTWHL 763
            HA+S+A +L+ S     T HL
Sbjct: 1100 HARSIAKELIGSIGFLETLHL 1120


>ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-like [Citrus sinensis]
          Length = 1087

 Score =  263 bits (672), Expect = 9e-68
 Identities = 141/245 (57%), Positives = 179/245 (73%), Gaps = 2/245 (0%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQ G+STFLEEL+EAS+IL++CT +SLVI+DELGRGTSTHDGVAIAYATL YLLEHK
Sbjct: 849  SDSIQQGRSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHK 908

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLY 361
            +CMVLFVTHYP+IADI+ +F GSVG YHVSYLT HK       V   MD+ +  DVTYLY
Sbjct: 909  KCMVLFVTHYPKIADIKTKFTGSVGTYHVSYLTSHK-------VMGPMDSKSDQDVTYLY 961

Query: 362  KLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMP--IDK 535
            K+V GVSE SFGFKVAQLAQLP SCI RA  +AA+LE EV  R +N+ +    +    D+
Sbjct: 962  KVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQ 1021

Query: 536  SEDAEKDAYLPQNCLQTAPIETLEEVEKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSL 715
             ++A+++  +         +E  E++  +YRDLF  L  A H +++ AK F  LKHA+S+
Sbjct: 1022 EQEAQENMPVSPESFYLGRVEASEDLISSYRDLFLNLKFATH-DDNPAKSFQFLKHARSI 1080

Query: 716  ANKLL 730
            A +L+
Sbjct: 1081 AKELI 1085


>gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]
          Length = 846

 Score =  257 bits (657), Expect = 5e-66
 Identities = 137/249 (55%), Positives = 170/249 (68%), Gaps = 5/249 (2%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQ G+STFLEELSEAS IL+ C+  SLVI+DELGRGTSTHDGVAIA+ATL YLLEHK
Sbjct: 598  SDSIQQGRSTFLEELSEASDILKKCSASSLVILDELGRGTSTHDGVAIAFATLQYLLEHK 657

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLY 361
            +CMVLFVTHYPEI  ++NEFPGSVG YHVSYLT   +   D    ++M+ +N +D+TYLY
Sbjct: 658  KCMVLFVTHYPEIVSVKNEFPGSVGPYHVSYLTSQGDVTGDCRSNEKMNYINSEDITYLY 717

Query: 362  KLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVC-----KRDKNKLSMNCSMP 526
            KL  GV+ERSFGFKVAQLAQLP +CI+RA+ +A RLE  VC      R +   S+N    
Sbjct: 718  KLAPGVAERSFGFKVAQLAQLPVACIQRAIVIAGRLEAAVCNYTEQSRIRRSYSINYRQD 777

Query: 527  IDKSEDAEKDAYLPQNCLQTAPIETLEEVEKAYRDLFFYLNLALHNEEDVAKRFNSLKHA 706
              KS +   D   P        +  ++   + YR+LF  +N AL  E    +RF  L  A
Sbjct: 778  GCKSSEPVDDVLEPY-LSSAGSVNCIDNSSELYRELFLNINFALLEENGGDRRFQFLMQA 836

Query: 707  KSLANKLLN 733
            KSLA +L++
Sbjct: 837  KSLAAQLIS 845


>gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus persica]
          Length = 1096

 Score =  256 bits (655), Expect = 8e-66
 Identities = 146/252 (57%), Positives = 176/252 (69%), Gaps = 8/252 (3%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSI  G+STFLEELSEASHIL +CT RSLVIIDELGRGTSTHDGVAIAYATLH LL+ K
Sbjct: 854  SDSIHQGRSTFLEELSEASHILHNCTARSLVIIDELGRGTSTHDGVAIAYATLHNLLQQK 913

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTV----NHDDV 349
            +CMVLFVTHYP+IA IR EFPGSV AYHVSYLT ++          +MDTV     ++DV
Sbjct: 914  KCMVLFVTHYPKIAYIRTEFPGSVEAYHVSYLTSNR----------DMDTVGMQSENEDV 963

Query: 350  TYLYKLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNC---S 520
            TYLYKLV GVSERSFGFKVA+LAQLPSSCIR+A  MAARLE  V  R +N+   N    S
Sbjct: 964  TYLYKLVPGVSERSFGFKVAELAQLPSSCIRQATIMAARLEAVVNSRARNRHGKNWLLKS 1023

Query: 521  MPIDKSEDAEKDAYLPQNCLQTAPIETLEEVE-KAYRDLFFYLNLALHNEEDVAKRFNSL 697
            +  D+ ++A+ +      CL+      LEE    AY+  F  L  A+ + +D  K    L
Sbjct: 1024 LVTDQKKEAQDEMLESPECLREGWSPVLEETNGGAYQKFFINLKAAIIDVDDPVKSCQYL 1083

Query: 698  KHAKSLANKLLN 733
             HA+S+A +L++
Sbjct: 1084 NHARSIARELIS 1095


>ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-like [Fragaria vesca
            subsp. vesca]
          Length = 1106

 Score =  250 bits (639), Expect = 6e-64
 Identities = 142/249 (57%), Positives = 174/249 (69%), Gaps = 5/249 (2%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQ G+STFLEELSEASHIL +CT RSLVIIDELGRGTSTHDGVAIAYATLH+LL+ K
Sbjct: 863  SDSIQQGRSTFLEELSEASHILHNCTSRSLVIIDELGRGTSTHDGVAIAYATLHHLLQQK 922

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKET-NLDFNVEQEMDTVNHDDVTYL 358
            RCMVLFVTHYP+IA IR EFPGSVGAYHVSYLT  ++   +D   E E       DVTYL
Sbjct: 923  RCMVLFVTHYPKIASIRTEFPGSVGAYHVSYLTSDRDRGTVDMTSENE-------DVTYL 975

Query: 359  YKLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKL---SMNCSMPI 529
            YKLV GVSERSFGFKVA+LAQLPSSCIRRA  MA RLE  V +R+ ++    S+  S  +
Sbjct: 976  YKLVPGVSERSFGFKVAELAQLPSSCIRRATFMADRLEAVVRRRESDRYGNKSLLRSPTM 1035

Query: 530  DKSEDAEKDAYLPQNCLQTAPIETLEEV-EKAYRDLFFYLNLALHNEEDVAKRFNSLKHA 706
            D+ E+ E++             +  E++    Y   F  L  A+ + +D+ +    L HA
Sbjct: 1036 DQKEEVEEEMLGTTGNAYAGENQIKEDIYGSEYNKFFLNLKTAI-SSDDLTENIRYLNHA 1094

Query: 707  KSLANKLLN 733
            +S+A +L++
Sbjct: 1095 RSIAQELVS 1103


>gb|EOY23169.1| DNA mismatch repair protein MSH3 isoform 1 [Theobroma cacao]
          Length = 1115

 Score =  248 bits (634), Expect = 2e-63
 Identities = 143/250 (57%), Positives = 169/250 (67%), Gaps = 6/250 (2%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQ G+STFLEELSEAS IL +CT RSLV+IDELGRGTSTHDGV+IAYATLH+LLE +
Sbjct: 877  SDSIQQGRSTFLEELSEASQILHNCTARSLVVIDELGRGTSTHDGVSIAYATLHHLLEQR 936

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLY 361
            +CMVLFVTHYP IADI+ EFPGSV  YHVSYLT H       N E  MD  +  +VTYLY
Sbjct: 937  KCMVLFVTHYPRIADIKVEFPGSVEVYHVSYLTAH-------NDEVTMDAKSDHEVTYLY 989

Query: 362  KLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSE 541
            KLV GVS RSFGFKVAQLAQLPSSCI +A+ MA RLE     R + K       P   S 
Sbjct: 990  KLVPGVSARSFGFKVAQLAQLPSSCISQAIIMATRLEAIESSRVRKKSEER--QPETSSS 1047

Query: 542  DAEKDAYLPQNCLQ------TAPIETLEEVEKAYRDLFFYLNLALHNEEDVAKRFNSLKH 703
            D E +    +N L+      +  +E LEE   A+ DL   L  A   ++D+ K F  LK 
Sbjct: 1048 DQELET--QENILKSIGSFSSERLENLEEFASAFSDLLLNLKSA-RTDDDLGKSFQLLKE 1104

Query: 704  AKSLANKLLN 733
            A+S+A +L+N
Sbjct: 1105 ARSIAKELIN 1114


>gb|ESW15390.1| hypothetical protein PHAVU_007G069100g [Phaseolus vulgaris]
          Length = 1075

 Score =  244 bits (624), Expect = 3e-62
 Identities = 139/246 (56%), Positives = 169/246 (68%), Gaps = 1/246 (0%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQ G+STFLEELSE SHILQ CT  SLVIIDELGRGTSTHDG+AIA+ATLHYLL+ K
Sbjct: 847  SDSIQEGRSTFLEELSETSHILQCCTEHSLVIIDELGRGTSTHDGMAIAHATLHYLLKQK 906

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLY 361
            R MVLFVTHYP+IA++  EFPGSV AYHVS+LTPH         +   ++++  DVTYLY
Sbjct: 907  RSMVLFVTHYPKIANLATEFPGSVAAYHVSHLTPH---------DARKNSISDHDVTYLY 957

Query: 362  KLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSE 541
            KL  GVS+RSFGFKVAQLAQLPS CI RA+ MA++LE  V  R  ++      +      
Sbjct: 958  KLAPGVSDRSFGFKVAQLAQLPSHCISRALVMASKLEALVNSRIHSRSGKELLL------ 1011

Query: 542  DAEKDAYLPQNCLQTAPIETLEEVEKAYRDLFFYLNL-ALHNEEDVAKRFNSLKHAKSLA 718
            D        + C+       L+E   AY+D  FYLNL A   ++D AK F+ LKHA+S+A
Sbjct: 1012 DTLVIGQEQEQCMAQPHDRPLQEFGIAYKD--FYLNLKAAIQDDDCAKSFHLLKHARSIA 1069

Query: 719  NKLLNS 736
             KL+ S
Sbjct: 1070 KKLIGS 1075


>gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis]
          Length = 1080

 Score =  243 bits (620), Expect = 9e-62
 Identities = 142/248 (57%), Positives = 173/248 (69%), Gaps = 3/248 (1%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQ G+STFLEELSE S+IL+ C  RSLVIIDELGRGTSTHDGVAIAYATLH+LLE K
Sbjct: 851  SDSIQQGRSTFLEELSETSNILKSCKERSLVIIDELGRGTSTHDGVAIAYATLHHLLEQK 910

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHD---DVT 352
            RCMVLFVTHYP+IA+I  EFPGSVGAYHVS+LT H+         +E  T+N +   DVT
Sbjct: 911  RCMVLFVTHYPKIAEIIAEFPGSVGAYHVSHLTSHR--------NEETGTMNSESDHDVT 962

Query: 353  YLYKLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPID 532
            YLYKLV GVSE+SFGFKVA+LAQLPSSCI RAV MA+RLE+ V  R  NK          
Sbjct: 963  YLYKLVPGVSEKSFGFKVAELAQLPSSCINRAVTMASRLEMVVSNRSANKCG-------- 1014

Query: 533  KSEDAEKDAYLPQNCLQTAPIETLEEVEKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKS 712
            K    E  +   ++   T  +E+ + ++  Y++ F  L  AL + +D AK    L  A+ 
Sbjct: 1015 KMHLLETSSLCQKDEKMTLEMESSKCLD-GYKEFFLILKNAL-SVDDHAKSLQLLNQARG 1072

Query: 713  LANKLLNS 736
            LAN+L++S
Sbjct: 1073 LANELISS 1080


>ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis thaliana]
            gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA
            mismatch repair protein MSH3; Short=AtMSH3; AltName:
            Full=MutS protein homolog 3 gi|3319876|emb|CAA07684.1|
            Msh3 protein [Arabidopsis thaliana]
            gi|332659675|gb|AEE85075.1| DNA mismatch repair protein
            MSH3 [Arabidopsis thaliana]
          Length = 1081

 Score =  241 bits (615), Expect = 4e-61
 Identities = 138/242 (57%), Positives = 165/242 (68%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQ G+STFLEELSEASHI++ C+ RSLVI+DELGRGTSTHDGVAIAYATL +LL  K
Sbjct: 863  SDSIQHGRSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLAEK 922

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLY 361
            RC+VLFVTHYPEIA+I N FPGSVG YHVSYLT          ++++  + +HDDVTYLY
Sbjct: 923  RCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLT----------LQKDKGSYDHDDVTYLY 972

Query: 362  KLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSE 541
            KLV G+  RSFGFKVAQLAQ+P SCIRRA++MAA+LE EV  R++     N  M   +  
Sbjct: 973  KLVRGLCSRSFGFKVAQLAQIPPSCIRRAISMAAKLEAEVRARER-----NTRMGEPEGH 1027

Query: 542  DAEKDAYLPQNCLQTAPIETLEEVEKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLAN 721
            +  + A               EE   A  DLF  L  AL +EED  K F  LKHA  +A 
Sbjct: 1028 EEPRGA---------------EESISALGDLFADLKFAL-SEEDPWKAFEFLKHAWKIAG 1071

Query: 722  KL 727
            K+
Sbjct: 1072 KI 1073


>dbj|BAD94621.1| putative DNA mismatch repair protein [Arabidopsis thaliana]
          Length = 386

 Score =  241 bits (615), Expect = 4e-61
 Identities = 138/242 (57%), Positives = 165/242 (68%)
 Frame = +2

Query: 2   SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
           SDSIQ G+STFLEELSEASHI++ C+ RSLVI+DELGRGTSTHDGVAIAYATL +LL  K
Sbjct: 168 SDSIQHGRSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLAEK 227

Query: 182 RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLY 361
           RC+VLFVTHYPEIA+I N FPGSVG YHVSYLT          ++++  + +HDDVTYLY
Sbjct: 228 RCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLT----------LQKDKGSYDHDDVTYLY 277

Query: 362 KLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSE 541
           KLV G+  RSFGFKVAQLAQ+P SCIRRA++MAA+LE EV  R++     N  M   +  
Sbjct: 278 KLVRGLCSRSFGFKVAQLAQIPPSCIRRAISMAAKLEAEVRARER-----NTRMGEPEGH 332

Query: 542 DAEKDAYLPQNCLQTAPIETLEEVEKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLAN 721
           +  + A               EE   A  DLF  L  AL +EED  K F  LKHA  +A 
Sbjct: 333 EEPRGA---------------EESISALGDLFADLKFAL-SEEDPWKAFEFLKHAWKIAG 376

Query: 722 KL 727
           K+
Sbjct: 377 KI 378


>ref|XP_006283020.1| hypothetical protein CARUB_v10004012mg [Capsella rubella]
            gi|482551725|gb|EOA15918.1| hypothetical protein
            CARUB_v10004012mg [Capsella rubella]
          Length = 1182

 Score =  239 bits (609), Expect = 2e-60
 Identities = 136/245 (55%), Positives = 164/245 (66%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQ G+STFLEELSEASHI++ C+ RSLVI+DELGRGTSTHDGVAIAYATL +LL  K
Sbjct: 951  SDSIQHGRSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLTEK 1010

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLY 361
            RC+VLFVTHYPEIA+I N FPG+VG YHVSY+T  K+ +            +HDDVTYLY
Sbjct: 1011 RCLVLFVTHYPEIAEISNGFPGAVGTYHVSYMTSQKDKS----------GFDHDDVTYLY 1060

Query: 362  KLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSE 541
            KLV G+  RSFGFKVAQLAQ+PSSCIRRA+ MAA+LE EV  R+K+    +   P +  E
Sbjct: 1061 KLVRGLCSRSFGFKVAQLAQIPSSCIRRAITMAAKLEAEVRAREKSTRMESLKEPKNHEE 1120

Query: 542  DAEKDAYLPQNCLQTAPIETLEEVEKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLAN 721
            D       P++        +LE         F  L LAL  EED ++ F  L  A  +A 
Sbjct: 1121 DTVHGD--PEDS------TSLEGSISGLDGFFADLKLALSGEEDPSRSFEYLNLAWKIAE 1172

Query: 722  KLLNS 736
            + L S
Sbjct: 1173 ESLAS 1177


>ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X2 [Glycine
            max]
          Length = 991

 Score =  238 bits (606), Expect = 4e-60
 Identities = 141/247 (57%), Positives = 168/247 (68%), Gaps = 4/247 (1%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQLG+STFLEELSE SHIL  CT  SLVIIDELGRGTSTHDG+AIA+ATLHYLL+ K
Sbjct: 758  SDSIQLGRSTFLEELSETSHILNSCTEHSLVIIDELGRGTSTHDGMAIAHATLHYLLKQK 817

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPH---KETNLDFNVEQEMDTVNHDDVT 352
            R MVLFVTHYP+IA +  EFPGSV AYHVS+L  H   K +NLD             DVT
Sbjct: 818  RSMVLFVTHYPKIASLATEFPGSVAAYHVSHLISHDASKNSNLD------------HDVT 865

Query: 353  YLYKLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPID 532
            YLYKLV GVSERSFGFKVAQLAQLPS CI RA+ MA++LE  V  R   + +    + +D
Sbjct: 866  YLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNSRIHGRSTK--ELLLD 923

Query: 533  KSEDAEKDAYLPQNCLQTAPIETLEEVEKAYRDLFFYLNL-ALHNEEDVAKRFNSLKHAK 709
                 ++   L    L        +E + AY+D  FYLNL A   ++D AK F+ L+HA+
Sbjct: 924  TLVIGQEKEQLMAQSLD----RPHKEFDMAYKD--FYLNLKAATEDDDWAKSFHLLEHAR 977

Query: 710  SLANKLL 730
            S+A KL+
Sbjct: 978  SIAKKLI 984


>ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Glycine
            max]
          Length = 1070

 Score =  238 bits (606), Expect = 4e-60
 Identities = 141/247 (57%), Positives = 168/247 (68%), Gaps = 4/247 (1%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQLG+STFLEELSE SHIL  CT  SLVIIDELGRGTSTHDG+AIA+ATLHYLL+ K
Sbjct: 837  SDSIQLGRSTFLEELSETSHILNSCTEHSLVIIDELGRGTSTHDGMAIAHATLHYLLKQK 896

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPH---KETNLDFNVEQEMDTVNHDDVT 352
            R MVLFVTHYP+IA +  EFPGSV AYHVS+L  H   K +NLD             DVT
Sbjct: 897  RSMVLFVTHYPKIASLATEFPGSVAAYHVSHLISHDASKNSNLD------------HDVT 944

Query: 353  YLYKLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPID 532
            YLYKLV GVSERSFGFKVAQLAQLPS CI RA+ MA++LE  V  R   + +    + +D
Sbjct: 945  YLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNSRIHGRSTK--ELLLD 1002

Query: 533  KSEDAEKDAYLPQNCLQTAPIETLEEVEKAYRDLFFYLNL-ALHNEEDVAKRFNSLKHAK 709
                 ++   L    L        +E + AY+D  FYLNL A   ++D AK F+ L+HA+
Sbjct: 1003 TLVIGQEKEQLMAQSLD----RPHKEFDMAYKD--FYLNLKAATEDDDWAKSFHLLEHAR 1056

Query: 710  SLANKLL 730
            S+A KL+
Sbjct: 1057 SIAKKLI 1063


>ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Cicer
            arietinum]
          Length = 1076

 Score =  238 bits (606), Expect = 4e-60
 Identities = 134/245 (54%), Positives = 170/245 (69%), Gaps = 1/245 (0%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQ G+STFLEELSE SHIL  CT RSLVI+DELGRGTSTHDG+AIAYATLHYLL+ K
Sbjct: 850  SDSIQQGRSTFLEELSETSHILHRCTGRSLVILDELGRGTSTHDGMAIAYATLHYLLKQK 909

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLY 361
            + +VLFVTHYP+IA +  EFPGSV AYHVS+LT H + + + N        NH+DVTYLY
Sbjct: 910  KSLVLFVTHYPKIACLETEFPGSVAAYHVSHLTSHDDASKNSN--------NHEDVTYLY 961

Query: 362  KLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSE 541
            KLV GVSERSFGFKVAQLAQLPS CI RA+ MA++LE  V  R   +      +     +
Sbjct: 962  KLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNNRIHGRSGKELLLDAPVID 1021

Query: 542  DAEKDAYLPQNCLQTAPIETLEEVEKAYRDLFFYLNL-ALHNEEDVAKRFNSLKHAKSLA 718
            + ++    P +C +       +E  +AY++  FY NL A   ++D AK F  L++A+S+A
Sbjct: 1022 EDQE----PHDCPR-------QEFGRAYKE--FYSNLKAAILDDDHAKSFQLLENARSIA 1068

Query: 719  NKLLN 733
              L++
Sbjct: 1069 KSLIS 1073


>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
            gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
            MSH3, putative [Ricinus communis]
          Length = 1100

 Score =  235 bits (599), Expect = 3e-59
 Identities = 136/246 (55%), Positives = 165/246 (67%), Gaps = 3/246 (1%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQ G+STFLEELSE SHIL+ CT  SLVIIDELGRGTSTHDG AIAYATL +LLE K
Sbjct: 861  SDSIQQGRSTFLEELSETSHILRKCTGYSLVIIDELGRGTSTHDGEAIAYATLCHLLEQK 920

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLY 361
            RCMVLFVTHYP+IA+IR  F  SVGAYHVSYL   K      N +      +++DVTYLY
Sbjct: 921  RCMVLFVTHYPKIANIRTGFLNSVGAYHVSYLMAEK------NNDATDSKFDNEDVTYLY 974

Query: 362  KLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMN---CSMPID 532
            KLV GVSERSFGFKVAQLAQLP+SCI RA  MAARLE  +  R +N+L  +    ++ ID
Sbjct: 975  KLVPGVSERSFGFKVAQLAQLPTSCIERATVMAARLEEAISCRIRNRLDKSQLLKALQID 1034

Query: 533  KSEDAEKDAYLPQNCLQTAPIETLEEVEKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKS 712
            + ++ ++             IE  EE+   Y   F     AL  ++  AK F  L++A+S
Sbjct: 1035 QLQEIQEKIPESPGNFHDKRIENYEELNNTYEKFFLNFKSALLGDD--AKSFQYLENARS 1092

Query: 713  LANKLL 730
            +A  L+
Sbjct: 1093 IARALI 1098


>ref|XP_006413297.1| hypothetical protein EUTSA_v10024274mg [Eutrema salsugineum]
            gi|557114467|gb|ESQ54750.1| hypothetical protein
            EUTSA_v10024274mg [Eutrema salsugineum]
          Length = 1088

 Score =  234 bits (596), Expect = 6e-59
 Identities = 133/241 (55%), Positives = 162/241 (67%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQ G+STFLEELSEASHI++ C+ RSLVIIDELGRGTSTHDGVAIAYATL +L+  K
Sbjct: 855  SDSIQHGRSTFLEELSEASHIIRTCSSRSLVIIDELGRGTSTHDGVAIAYATLQHLIAEK 914

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLY 361
            RC+VLFVTHYPEIA+I N FPGS G YHVSYLT  K+              +HDDVTYLY
Sbjct: 915  RCLVLFVTHYPEIAEISNRFPGSAGTYHVSYLTSQKDDG----------GCDHDDVTYLY 964

Query: 362  KLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSE 541
            KLV G+  RSFGFKVAQLAQ+P SCI RA++MA +LE EV  R++  LS+   M      
Sbjct: 965  KLVRGLCSRSFGFKVAQLAQIPPSCIHRAISMAGKLEDEVRARERYTLSIKYLMESPGEP 1024

Query: 542  DAEKDAYLPQNCLQTAPIETLEEVEKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLAN 721
             A ++    ++   +A     EE   A  D F  L +AL +EED ++ F  L  A  +A 
Sbjct: 1025 KAREEHAESRDSEDSA---NSEENMSALGDFFADLRVAL-SEEDPSRSFEFLNRAWKIAE 1080

Query: 722  K 724
            +
Sbjct: 1081 E 1081


>ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
            lyrata] gi|297313441|gb|EFH43864.1| hypothetical protein
            ARALYDRAFT_492273 [Arabidopsis lyrata subsp. lyrata]
          Length = 1078

 Score =  233 bits (594), Expect = 1e-58
 Identities = 139/243 (57%), Positives = 164/243 (67%), Gaps = 2/243 (0%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQ G+STFLEELSEASHI++ C+ RSLVI+DELGRGTSTHDGVAIAYATL +LL  K
Sbjct: 861  SDSIQHGRSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLLEK 920

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLY 361
            RC+VLFVTHYPEIA+I N F GSVG YHVSYLT  K+ +            +HDDVTYLY
Sbjct: 921  RCLVLFVTHYPEIAEISNGFRGSVGTYHVSYLTSQKKKS----------GFDHDDVTYLY 970

Query: 362  KLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSE 541
            KLV G+  RSFGFKVAQLAQ+PSSCIRRA++M A+LE EV  R++N         + ++E
Sbjct: 971  KLVRGLCSRSFGFKVAQLAQIPSSCIRRAISMGAKLEAEVGARERN-------TRMGEAE 1023

Query: 542  DAEKDAYLPQNCLQTAPIE--TLEEVEKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSL 715
              E+           AP +    EE   A  DLF  L  AL +EED  K F  L HA  +
Sbjct: 1024 GHEEHG---------APGDWTGAEESISALGDLFADLKFAL-SEEDPWKAFEFLNHAWKI 1073

Query: 716  ANK 724
            A K
Sbjct: 1074 AAK 1076


>ref|XP_004960023.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH3-like
            [Setaria italica]
          Length = 1104

 Score =  224 bits (570), Expect = 6e-56
 Identities = 131/246 (53%), Positives = 167/246 (67%), Gaps = 3/246 (1%)
 Frame = +2

Query: 2    SDSIQLGKSTFLEELSEASHILQHCTFRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHK 181
            SDSIQ G STF EE++EAS+IL +C+ RSLVIIDELGRGTSTHDGVAIAYATLHYLL+ K
Sbjct: 863  SDSIQQGTSTFHEEMNEASNILHNCSSRSLVIIDELGRGTSTHDGVAIAYATLHYLLKEK 922

Query: 182  RCMVLFVTHYPEIADIRNEFPGSVGAYHVSYLTPHKETNL-DFNVEQEMDTVNHDDVTYL 358
            +C+V+FVTHYP+I DI+ EF GSVGAYHVSYL   K   + D  +E   ++ +  ++T+L
Sbjct: 923  KCIVIFVTHYPKILDIQREFEGSVGAYHVSYLATRKLVEVTDKPLESSPESKDLGEITFL 982

Query: 359  YKLVLGVSERSFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKL--SMNCSMPID 532
            YKLV G S+RSFG  VA LAQLPS CI RA  MAA+L+ E+  R++NKL  +M+ +    
Sbjct: 983  YKLVAGASDRSFGLNVALLAQLPSRCIERASIMAAKLQEELSMREENKLRRTMDAATVDG 1042

Query: 533  KSEDAEKDAYLPQNCLQTAPIETLEEVEKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKS 712
             SE + +   L   C Q  P + L E   A R +   + LA  N  DV     SLKHA+ 
Sbjct: 1043 PSESSTEVGLL---CAQ--PYQALAE---ACRRVLLTMTLAQSN-NDVTNSLCSLKHARE 1093

Query: 713  LANKLL 730
            +A K +
Sbjct: 1094 VAQKTI 1099