BLASTX nr result

ID: Rehmannia25_contig00018078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00018078
         (741 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]...    77   2e-22
gb|AAA84681.1| unknown protein (chloroplast) [Nicotiana tabacum]...    69   1e-09
ref|XP_002335728.1| predicted protein [Populus trichocarpa]            69   2e-09

>gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]
           gi|224352|prf||1102209F ORF 6
          Length = 79

 Score = 77.0 bits (188), Expect(2) = 2e-22
 Identities = 36/42 (85%), Positives = 38/42 (90%)
 Frame = +1

Query: 22  MKVDYLSVYFQTSIIPSRTKHESFDSFGSHAQLLRVNSHSFF 147
           MKVDY S+ FQ SIIPSRTKHESFDSFGSHAQLL+VNSH FF
Sbjct: 1   MKVDYFSIPFQNSIIPSRTKHESFDSFGSHAQLLKVNSHIFF 42



 Score = 55.5 bits (132), Expect(2) = 2e-22
 Identities = 28/39 (71%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
 Frame = +2

Query: 143 FFYECNEPILSSFFKVQKN-ESNAKQKYLEDSSDKIKNM 256
           FFYECNEPI SS F  QK+ E+N   KY EDSSDKIKNM
Sbjct: 41  FFYECNEPIFSSLFIFQKDIETNVIPKYSEDSSDKIKNM 79


>gb|AAA84681.1| unknown protein (chloroplast) [Nicotiana tabacum]
           gi|224350|prf||1102209D ORF 4
          Length = 64

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
 Frame = -1

Query: 291 EEKKRNNFADNYIFLILSEESSKYFCFALDSF-FWTLKKEERIGSLHS 151
           ++KKRNNFADNYIF ILSEESS+YF   L S  FW + KEE+IGSLHS
Sbjct: 17  KKKKRNNFADNYIFFILSEESSEYFGITLVSISFWNMNKEEKIGSLHS 64


>ref|XP_002335728.1| predicted protein [Populus trichocarpa]
          Length = 79

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 33/45 (73%), Positives = 40/45 (88%), Gaps = 3/45 (6%)
 Frame = +1

Query: 22  MKVDYLSVYFQTSIIPSRTKHESFDSFGSHAQLLRV---NSHSFF 147
           MKVDYLS++ +TS+IPSRTKHESFDSFGSHAQL+++   NSH FF
Sbjct: 1   MKVDYLSIHCKTSMIPSRTKHESFDSFGSHAQLVQLLMGNSHLFF 45


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