BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00017903
         (2212 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...  1216   0.0  
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...  1215   0.0  
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...  1212   0.0  
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1209   0.0  
gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus pe...  1197   0.0  
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1192   0.0  
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1192   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1182   0.0  
emb|CBI27412.3| unnamed protein product [Vitis vinifera]             1174   0.0  
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr...  1170   0.0  
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1170   0.0  
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1168   0.0  
gb|EPS71577.1| hypothetical protein M569_03175, partial [Genlise...  1166   0.0  
ref|XP_002331270.1| predicted protein [Populus trichocarpa]          1165   0.0  
dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa...  1162   0.0  
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g...  1162   0.0  
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo...  1162   0.0  
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S...  1152   0.0  
ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1152   0.0  
gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobrom...  1148   0.0  

>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial; AltName:
            Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 2B; Flags: Precursor
            gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
            RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score = 1216 bits (3146), Expect = 0.0
 Identities = 600/738 (81%), Positives = 653/738 (88%), Gaps = 2/738 (0%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELL DMCEQKLAPNLPY+KSLFLGWFEPLR+KIAEEQE   +GKSKAAYAKY   LPADM
Sbjct: 207  ELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADM 266

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            MAVITMHKLM LLM GG+HG ARVVQAA VIGDAIEQEVRIH FL               
Sbjct: 267  MAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQK- 325

Query: 363  XXXSDGN--IQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIEL 536
                DG    QEQEKLR++VT LMKKQKLRAV QIV +Q + +PWGQDAKAKVGSRLIEL
Sbjct: 326  ---EDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIEL 382

Query: 537  ILQTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTA 716
            +LQTAYIQPP NQLA  PPDIRPAF+H+ RTV K+ K++SRRYG+IQCD LV KGLERTA
Sbjct: 383  LLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETKSASRRYGIIQCDELVFKGLERTA 442

Query: 717  RHMVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEAL 896
            RHMVIPYMPMLVPPVKWTGYDKG ++YLPSYVMRTHGARQQRE+VKRA R QL+PVFEAL
Sbjct: 443  RHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEAL 502

Query: 897  DTLGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXX 1076
            DTLGST+WR+NKRVLS+IDRIWA GG L DLVDR+D PLPE+PDTEDEAL          
Sbjct: 503  DTLGSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKS 562

Query: 1077 XXXENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRG 1256
               EN ERHSQRCD ELKLAVARKMK+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG
Sbjct: 563  VKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRG 622

Query: 1257 ILEFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGK 1436
            +L F+EGRPLG+SGL WLKIHLANLFA GV+KL  EGRIAFTENH+DDIFDSAD+PLEG+
Sbjct: 623  VLVFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAFTENHMDDIFDSADKPLEGR 682

Query: 1437 RWWLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAA 1616
            RWWLNAEDPFQCLA CINL+EA+RS SPET+ISHIPVHQDGSCNGLQHYAALGRD+LGAA
Sbjct: 683  RWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIPVHQDGSCNGLQHYAALGRDELGAA 742

Query: 1617 AVNLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMT 1796
            AVNLVAGEKPADVYSGIA RVLDIMK DAQ+DPA FPDA+RAR L+NQVDRKLVKQTVMT
Sbjct: 743  AVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARALVNQVDRKLVKQTVMT 802

Query: 1797 SVYGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLG 1976
            SVYGVTYIGARDQIKRRLKER AI DD+E+FGAACYAAKVTLTALG+MFEAARSIM+WLG
Sbjct: 803  SVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLG 862

Query: 1977 DCAKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAF 2156
            +CAK+IA ENEPVRWTTPLGLPVVQPYRK+GRHLIKTSLQ+LTLQ E++KVMVKRQRTAF
Sbjct: 863  ECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQQETEKVMVKRQRTAF 922

Query: 2157 PPNFVHSLDGSHMMMTAI 2210
            PPNF+HSLDGSHMMMTA+
Sbjct: 923  PPNFIHSLDGSHMMMTAV 940


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
            AltName: Full=T7 bacteriophage-type single subunit RNA
            polymerase 2; Flags: Precursor
            gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score = 1215 bits (3144), Expect = 0.0
 Identities = 596/738 (80%), Positives = 654/738 (88%), Gaps = 2/738 (0%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELL DMCEQKLAPNLPY+KSLFLGWFEPLR+KIAEEQE   +GKSKAAYAKYF  LPADM
Sbjct: 206  ELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADM 265

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            MAVITMHKLM LLM GG+HG ARVVQAA VIGDAIEQEVRIH FL               
Sbjct: 266  MAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQK- 324

Query: 363  XXXSDGN--IQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIEL 536
                DG    QEQEKLR++VT LMKKQKLRAV QIV +Q + +PWGQDA+AKVGSRLI+L
Sbjct: 325  ---EDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDL 381

Query: 537  ILQTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTA 716
            +LQTAYIQPP NQLA  PPDIRPAFVH+ RTV K+ K++SRRYG+IQCD LV KGLERTA
Sbjct: 382  LLQTAYIQPPANQLAVDPPDIRPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERTA 441

Query: 717  RHMVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEAL 896
            RHMVIPYMPMLVPPVKWTGYDKG ++YLPSYVMRTHGARQQRE+VKRA R QL+PVFEAL
Sbjct: 442  RHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEAL 501

Query: 897  DTLGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXX 1076
            DTLG+T+WR+NKRVLS++DRIWA GG L DLVDR+D PLPE+PDTEDEAL          
Sbjct: 502  DTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKS 561

Query: 1077 XXXENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRG 1256
               EN ERHSQRCD ELKLAVARKMK+EE FFYPHN+DFRGRAYPMHPHLNHLGSDICRG
Sbjct: 562  VKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRG 621

Query: 1257 ILEFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGK 1436
            +LEF+EGRPLG+SGL WLKIHLANLFA GV+KL  EGRI FTENH+DDIFDS+D+PLEG+
Sbjct: 622  VLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSSDKPLEGR 681

Query: 1437 RWWLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAA 1616
            RWWLNAEDPFQCLA CINL+EA+RS SPET++SHIPVHQDGSCNGLQHYAALGRDKLGAA
Sbjct: 682  RWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKLGAA 741

Query: 1617 AVNLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMT 1796
            AVNLVAGEKPADVYSGIA RVLDIMK DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMT
Sbjct: 742  AVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMT 801

Query: 1797 SVYGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLG 1976
            SVYGVTYIGARDQIKRRLKER AI DD+E+FGAACYAAKVTLTALG+MFEAARSIM+WLG
Sbjct: 802  SVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLG 861

Query: 1977 DCAKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAF 2156
            +CAK+IA ENEPVRWTTPLGLPVVQPYRK+GRHLIKTSLQ+LTLQ E++KVMVKRQRTAF
Sbjct: 862  ECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAF 921

Query: 2157 PPNFVHSLDGSHMMMTAI 2210
            PPNF+HSLDGSHMMMTA+
Sbjct: 922  PPNFIHSLDGSHMMMTAV 939


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris] gi|17221595|dbj|BAB78465.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score = 1212 bits (3135), Expect = 0.0
 Identities = 594/738 (80%), Positives = 653/738 (88%), Gaps = 2/738 (0%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELL DMCEQKLAPNLPY+KSLFLGWFEPLR+KIAEEQE   +GKSKAAYAKYF  LPADM
Sbjct: 206  ELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADM 265

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            MAVITMHKLM LLM GG+HG ARVVQAA VIGDAIEQEVRIH FL               
Sbjct: 266  MAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQK- 324

Query: 363  XXXSDGN--IQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIEL 536
                DG    QEQEKLR++VT LMKKQKLRAV QIV +Q + +PWGQDA+AKVGSRLI+L
Sbjct: 325  ---EDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDL 381

Query: 537  ILQTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTA 716
            +LQTAYIQPP NQLA  PPDI PAFVH+ RTV K+ K++SRRYG+IQCD LV KGLERTA
Sbjct: 382  LLQTAYIQPPANQLAVDPPDIPPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERTA 441

Query: 717  RHMVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEAL 896
            RHMVIPYMPMLVPPVKWTGYDKG ++YLPSYVMRTHGARQQRE+VKRA R QL+PVFEAL
Sbjct: 442  RHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEAL 501

Query: 897  DTLGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXX 1076
            DTLG+T+WR+NKRVLS++DRIWA GG L DLVDR+D PLPE+PDTEDEALL         
Sbjct: 502  DTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALLPKWRWKVKS 561

Query: 1077 XXXENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRG 1256
               EN ERHSQRCD ELKLAVARKMK+EE FFYPHN+DFRGRAYPMHPHLNHLGSDICRG
Sbjct: 562  VKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRG 621

Query: 1257 ILEFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGK 1436
            +LEF+EGRPLG+SGL WLKIHLANLFA GV+KL  EGRI FTENH+DDIFDS+D+PLEG+
Sbjct: 622  VLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFDSSDKPLEGR 681

Query: 1437 RWWLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAA 1616
            RWWLNAEDPFQCLA CINL+EA+RS SPET++SHIPVHQDGSCNGLQHYAALGRDKLGAA
Sbjct: 682  RWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNGLQHYAALGRDKLGAA 741

Query: 1617 AVNLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMT 1796
            AVNLVAGEKPA+ YSGIA RVLDIMK DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMT
Sbjct: 742  AVNLVAGEKPAEAYSGIAARVLDIMKRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMT 801

Query: 1797 SVYGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLG 1976
            SVYGVTYIGARDQIKRRLKER AI DD+E+FGAACYAAKVTLTALG+MFEAARSIM+WLG
Sbjct: 802  SVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTALGEMFEAARSIMTWLG 861

Query: 1977 DCAKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAF 2156
            +CAK+IA ENEPVRWTTPLGLPVVQPYRK+GRHLIKTSLQ+LTLQ E++KVMVKRQRTAF
Sbjct: 862  ECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQRETEKVMVKRQRTAF 921

Query: 2157 PPNFVHSLDGSHMMMTAI 2210
            PPNF+HSLDGSHMMMTA+
Sbjct: 922  PPNFIHSLDGSHMMMTAV 939


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score = 1209 bits (3129), Expect = 0.0
 Identities = 592/737 (80%), Positives = 646/737 (87%), Gaps = 1/737 (0%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELL DMCEQKLAPNLPYMKSLFLGWFEPLR+ I +EQE  R GK+KAAYA YFD LPADM
Sbjct: 218  ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKNKAAYAPYFDQLPADM 277

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            M+VITMHKL+ LLM GGEHG  RVVQAACVIGDAIEQEVRIH FL               
Sbjct: 278  MSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVGKDKNVE 337

Query: 363  XXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELIL 542
                D  I EQEKLR++VT LMKKQKL A RQIV      +PWG +AKAKVGSRLIEL++
Sbjct: 338  GGGFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVKGHDNSKPWGPEAKAKVGSRLIELLM 397

Query: 543  QTAYIQPPT-NQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTAR 719
            QTAYIQPP  NQLAD PPDIRPAFVHTF+TV ++ K   RR+GVI+CD LV+KGLERTAR
Sbjct: 398  QTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKKIGRRFGVIECDPLVKKGLERTAR 457

Query: 720  HMVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALD 899
            HMVIPY+PMLVPP+KWTGYDKGA+++LPSYVMRTHGARQQRE+VKRAPR QL PVFEAL+
Sbjct: 458  HMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPRNQLEPVFEALN 517

Query: 900  TLGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXX 1079
            TLG+T+WR+NKR+  ++DRIWA GG L DLVDRND+PLPE+PDTEDEA L          
Sbjct: 518  TLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVPLPEKPDTEDEAQLRKWKWKVKSV 577

Query: 1080 XXENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGI 1259
               NSERHSQRCD ELKLAVARKMK+E+GFFYPHNLDFRGRAYPMHP+LNHLGSD+CRGI
Sbjct: 578  KKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 637

Query: 1260 LEFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKR 1439
            LEF+EGRPLG SGL WLKIHLANLFA GVDKL HEGRI FTENHLDDIFDSADRPLEGKR
Sbjct: 638  LEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGRITFTENHLDDIFDSADRPLEGKR 697

Query: 1440 WWLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAA 1619
            WWLNAEDPFQ LAACINL+EA+RS SPETTISHIPVHQDGSCNGLQHYAALGRD+LGA A
Sbjct: 698  WWLNAEDPFQFLAACINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDQLGATA 757

Query: 1620 VNLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTS 1799
            VNLVAGEKPADVYSGIA RVLDIMK DA+KDPA+FPDALRAR+LINQVDRKLVKQTVMTS
Sbjct: 758  VNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPDALRARILINQVDRKLVKQTVMTS 817

Query: 1800 VYGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGD 1979
            VYGVTYIGARDQIKRRLKER+AI DD E+FGAACYAAK+TLTALG+MF+AARSIMSWLGD
Sbjct: 818  VYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAAKITLTALGEMFQAARSIMSWLGD 877

Query: 1980 CAKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFP 2159
            CAK+IA EN+PVRWTTPLGLPVVQPYRK+GRHLIKTSLQVLTLQ E++ +MVKRQRTAFP
Sbjct: 878  CAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETETIMVKRQRTAFP 937

Query: 2160 PNFVHSLDGSHMMMTAI 2210
            PNFVHSLDGSHMMMTAI
Sbjct: 938  PNFVHSLDGSHMMMTAI 954


>gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score = 1197 bits (3097), Expect = 0.0
 Identities = 585/736 (79%), Positives = 638/736 (86%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            EL+ DMCEQKLAPNLPYMKSLFLGWFEPLRN I +EQ+  RKGK+K AYA Y D LPADM
Sbjct: 210  ELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQDLCRKGKNKTAYAPYIDQLPADM 269

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            M+VITMHKLM LLM GGEHG  RVV AAC IG+AIEQEVRIH FL               
Sbjct: 270  MSVITMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMTRKKKVDKDQENG 329

Query: 363  XXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELIL 542
               SD   +E+EKL ++VT LMKKQKL+AVR IV+K    + W  +A+AKVGSRLIEL+ 
Sbjct: 330  E--SDAAKKEREKLNKKVTNLMKKQKLKAVRGIVSKHDASKSWSLEARAKVGSRLIELLT 387

Query: 543  QTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARH 722
            QTA+IQPP +QLADGPPDIRPAFVHTFRTV KD K +SRRYGVI+CD LV KGLE+TARH
Sbjct: 388  QTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDAKNASRRYGVIECDPLVLKGLEKTARH 447

Query: 723  MVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDT 902
            MVIPYMPMLVPP+ WTGYDKG Y +LPSYVMR HGARQQRE++KR PR+QL PVF+ALD 
Sbjct: 448  MVIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAIKRTPREQLEPVFKALDA 507

Query: 903  LGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXX 1082
            LG+TRWRVNKRVLS++DRIWASGGHL DLVDRND+PLPE+PDTEDE LL           
Sbjct: 508  LGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPLPEEPDTEDETLLKKWKWKVKSVK 567

Query: 1083 XENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGIL 1262
             EN ERHSQRCDTELKLAVARKMK+EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGIL
Sbjct: 568  KENMERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGIL 627

Query: 1263 EFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRW 1442
            EF EGRPLGKSGL WLKIHLANL+A GVDKL  EGRIAFTENHLDDIFDS D+PLEG+RW
Sbjct: 628  EFQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEGRIAFTENHLDDIFDSVDKPLEGRRW 687

Query: 1443 WLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAV 1622
            WL AEDPFQCLA CINLAEA+RS SPET ISHIPVHQDGSCNGLQHYAALGRDKLGAA+V
Sbjct: 688  WLKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASV 747

Query: 1623 NLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSV 1802
            NLV GEKPADVYSGIA RVL+IM+ DAQKDP VFP+ALRA+LLINQVDRKLVKQTVMTSV
Sbjct: 748  NLVTGEKPADVYSGIAVRVLEIMRRDAQKDPVVFPEALRAKLLINQVDRKLVKQTVMTSV 807

Query: 1803 YGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDC 1982
            YGVTYIGARDQIKRRLKER +I DDAEIFG ACYAAK+TLTALG+MFEAAR IMSWLG+C
Sbjct: 808  YGVTYIGARDQIKRRLKERGSISDDAEIFGCACYAAKITLTALGEMFEAARGIMSWLGEC 867

Query: 1983 AKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPP 2162
            AK+IA EN+PVRWTTPLGLPVVQPYRK GRHLIKTSLQVLTLQ E++KVMVKRQRTAFPP
Sbjct: 868  AKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPP 927

Query: 2163 NFVHSLDGSHMMMTAI 2210
            NFVHSLD SHMMMTAI
Sbjct: 928  NFVHSLDSSHMMMTAI 943


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 1019

 Score = 1192 bits (3084), Expect = 0.0
 Identities = 588/738 (79%), Positives = 644/738 (87%), Gaps = 2/738 (0%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELL DMCEQKLAPNLPY+KSLFLGWFEPLR+KIA+EQE   +GKSKAAY+KYF  LPADM
Sbjct: 205  ELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAQEQELCIQGKSKAAYSKYFHLLPADM 264

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            MAVITMHKLM LLM GGEHG ARVVQAA  IGDAIEQEVRIH FL               
Sbjct: 265  MAVITMHKLMGLLMTGGEHGNARVVQAALTIGDAIEQEVRIHKFLEKTEKHKAEKDRKM- 323

Query: 363  XXXSDGN--IQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIEL 536
                DG     EQ+KL ++VT+LMKKQKLRAV QIV  Q + +PWGQDAKAKVGSRLIE 
Sbjct: 324  ---EDGEHATLEQKKLHKKVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEF 380

Query: 537  ILQTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTA 716
            +LQTAYIQ P +QLA  PPDIRPAF+H+ RTV K+ K++SRRYGVIQCD LV KGLERTA
Sbjct: 381  LLQTAYIQSPADQLAVDPPDIRPAFIHSTRTVAKETKSASRRYGVIQCDELVFKGLERTA 440

Query: 717  RHMVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEAL 896
            RHMVIPYMPMLVPPVKWTGYDKG ++YLPSYVMRTHGARQQRE+VKRA R QLRPVFEAL
Sbjct: 441  RHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLRPVFEAL 500

Query: 897  DTLGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXX 1076
            DTLGST+WR+NKRVLS++DRIWA GG L DLVDR+D PLPE+PDTEDEA+          
Sbjct: 501  DTLGSTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEAVCTKWRWKVKS 560

Query: 1077 XXXENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRG 1256
               EN ERHSQRCD ELKLAVA +MK+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG
Sbjct: 561  VKKENRERHSQRCDIELKLAVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRG 620

Query: 1257 ILEFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGK 1436
            +LEF+ GRPLG+SGL WLKIHLANLFA GVDKL  +GRIAFTE+HLDDIFDSAD+PLEG+
Sbjct: 621  VLEFAAGRPLGESGLRWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGR 680

Query: 1437 RWWLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAA 1616
            RWWLNAEDPFQCLA CINL+EA+RS SPET ISHIPVHQDGSCNGLQHYAALGRDKLGAA
Sbjct: 681  RWWLNAEDPFQCLAVCINLSEAVRSSSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAA 740

Query: 1617 AVNLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMT 1796
            AVNLVAGEKPADVYSGIA RVLDIM  DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMT
Sbjct: 741  AVNLVAGEKPADVYSGIAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMT 800

Query: 1797 SVYGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLG 1976
            SVYGVTYIGARDQIKRRLKER AI DD+E+FGAA YAAKVTLTALG+MFEAARSIM+WL 
Sbjct: 801  SVYGVTYIGARDQIKRRLKERGAIADDSELFGAASYAAKVTLTALGEMFEAARSIMTWLA 860

Query: 1977 DCAKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAF 2156
            +CAK+IA ENEPVRWTTPLGLPVVQPYRK+GRH IKTSLQ+LTLQ E++KVMVKRQRTAF
Sbjct: 861  ECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAF 920

Query: 2157 PPNFVHSLDGSHMMMTAI 2210
            PPNF+HSLDGSHMMMTA+
Sbjct: 921  PPNFIHSLDGSHMMMTAV 938


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Solanum lycopersicum]
          Length = 1022

 Score = 1192 bits (3083), Expect = 0.0
 Identities = 585/738 (79%), Positives = 643/738 (87%), Gaps = 2/738 (0%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELL DMCEQKLAPNLPY+KSLFLGWFEPLR+KIA+EQE   +GKSKAAY+KYF  LPADM
Sbjct: 208  ELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAQEQELCIQGKSKAAYSKYFHLLPADM 267

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            MAVITMHKLM LLM GGEHG  RVVQAA  IGDAIEQEVRIH FL               
Sbjct: 268  MAVITMHKLMGLLMTGGEHGNVRVVQAALTIGDAIEQEVRIHKFLEKTEKHKAEKDRNM- 326

Query: 363  XXXSDGN--IQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIEL 536
                DG     EQ+KL ++VT+LMKKQKLRAV QIV  Q + +PWGQDAKAKVGSRLIE 
Sbjct: 327  ---EDGEHATLEQKKLHKKVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEF 383

Query: 537  ILQTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTA 716
            +LQTAYIQ P +QLA  PPDIRPAF+H+ RT+ K+ K++SRRYGVIQCD LV KGLERTA
Sbjct: 384  LLQTAYIQSPADQLAVDPPDIRPAFIHSTRTLAKETKSASRRYGVIQCDELVFKGLERTA 443

Query: 717  RHMVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEAL 896
            RHMVIPYMPMLVPPVKWTGYDKG ++YLPSYVMRTHGARQQRE+VKR  R QL+PVFEAL
Sbjct: 444  RHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRTSRNQLQPVFEAL 503

Query: 897  DTLGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXX 1076
            DTLGST+WR+NKRVLS++DRIWA GG L DLVDR+D+PLPE+PDTEDEA+          
Sbjct: 504  DTLGSTKWRINKRVLSVVDRIWAGGGRLADLVDRDDVPLPEEPDTEDEAVCTKWRWKVKS 563

Query: 1077 XXXENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRG 1256
               EN ERHSQRCD ELKLAVA +MK+EEGFFYPHN+DFRGRAYPMHPHLNHLGSDICRG
Sbjct: 564  VKKENRERHSQRCDIELKLAVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRG 623

Query: 1257 ILEFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGK 1436
            +LEF+ GRPLGKSGL WLKIHLANLFA GVDKL  +GRIAFTE+HLDDIFDSAD+PLEG+
Sbjct: 624  VLEFAAGRPLGKSGLRWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPLEGR 683

Query: 1437 RWWLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAA 1616
             WWLNAEDPFQCLA CINL+EA+RS SPET ISH+PVHQDGSCNGLQHYAALGRDKLGAA
Sbjct: 684  CWWLNAEDPFQCLAVCINLSEAVRSSSPETVISHVPVHQDGSCNGLQHYAALGRDKLGAA 743

Query: 1617 AVNLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMT 1796
            AVNLVAGEKPADVYSGIA RVLDIM  DAQ+DPA FPDA+RAR+L+NQVDRKLVKQTVMT
Sbjct: 744  AVNLVAGEKPADVYSGIAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMT 803

Query: 1797 SVYGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLG 1976
            SVYGVTYIGARDQIKRRLKER AI DD E+FGAACYAAKVTLTALG+MFEAARSIM+WLG
Sbjct: 804  SVYGVTYIGARDQIKRRLKERGAIADDTELFGAACYAAKVTLTALGEMFEAARSIMTWLG 863

Query: 1977 DCAKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAF 2156
            +CAK+IA ENEPVRWTTPLGLPVVQPYRK+GRH IKTSLQ+LTLQ E++KVMVKRQRTAF
Sbjct: 864  ECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAF 923

Query: 2157 PPNFVHSLDGSHMMMTAI 2210
            PPNF+HSLDGSHMMMTA+
Sbjct: 924  PPNFIHSLDGSHMMMTAV 941


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score = 1182 bits (3057), Expect = 0.0
 Identities = 575/736 (78%), Positives = 645/736 (87%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELL+DMCEQKLAPNLPY+KSLFLGWFEPLR+ IA EQ+  ++GK++AAYA YFDHLPADM
Sbjct: 164  ELLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADM 223

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            MAVITMHKLM LLM G  +G ARVVQAAC IG+AIE EVRI  F+               
Sbjct: 224  MAVITMHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDG 283

Query: 363  XXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELIL 542
               S+   +EQEKLR++V+ LMKKQKL+ VRQIV +Q + +PWGQDA  KVGSRLIEL++
Sbjct: 284  G--SNPVTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLI 341

Query: 543  QTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARH 722
            +TAYIQPP +QL DGPPDIRPAFVHT +TV K+ +  +RRYGVI+CD LVRKGLE+TARH
Sbjct: 342  ETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARH 401

Query: 723  MVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDT 902
            MVIPYMPMLVPP+ WTGYDKGAY++LPSYVMR HGARQQRE++KRAPRK L P FEAL+T
Sbjct: 402  MVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNT 461

Query: 903  LGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXX 1082
            LG+T+WR+NKRVL +IDRIWASGG L DLVDR D+PLPE+PDTEDEA +           
Sbjct: 462  LGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVK 521

Query: 1083 XENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGIL 1262
             ENSERHSQRCD ELKLAVARKMK+E+GFFYPHNLDFRGRAYPMHP+LNHLGSD+CRGIL
Sbjct: 522  KENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 581

Query: 1263 EFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRW 1442
            EF+EGRPLGKSGL WLKIHLAN++A GVDKL +EGR+AFTENHL+DIFDSADRPLEG+RW
Sbjct: 582  EFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRW 641

Query: 1443 WLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAV 1622
            WL+AEDPFQCLA CINL+EA+RS SPETTISH+PVHQDGSCNGLQHYAALGRDKLGAAAV
Sbjct: 642  WLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAV 701

Query: 1623 NLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSV 1802
            NLVAGEKPADVYSGIA RVLDIM+ DAQKDPA  P+ALRARLLI+QVDRKLVKQTVMTSV
Sbjct: 702  NLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSV 761

Query: 1803 YGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDC 1982
            YGVTYIGARDQIKRRLKER AI D+ E+F A+CYAAK TLTALG+MFEAARSIMSWLGDC
Sbjct: 762  YGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDC 821

Query: 1983 AKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPP 2162
            AK+IA EN PVRW TPLGLPVVQPYRK+GRHLIKTSLQVL+LQ E+DKVMVKRQRTAFPP
Sbjct: 822  AKVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPP 881

Query: 2163 NFVHSLDGSHMMMTAI 2210
            NFVHSLDGSHMMMTA+
Sbjct: 882  NFVHSLDGSHMMMTAV 897


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score = 1174 bits (3037), Expect = 0.0
 Identities = 571/731 (78%), Positives = 640/731 (87%)
 Frame = +3

Query: 18   MCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADMMAVIT 197
            MCEQKLAPNLPY+KSLFLGWFEPLR+ IA EQ+  ++GK++AAYA YFDHLPADMMAVIT
Sbjct: 1    MCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVIT 60

Query: 198  MHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXXXXXSD 377
            MHKLM LLM G  +G ARVVQAAC IG+AIE EVRI  F+                  S+
Sbjct: 61   MHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGG--SN 118

Query: 378  GNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELILQTAYI 557
               +EQEKLR++V+ LMKKQKL+ VRQIV +Q + +PWGQDA  KVGSRLIEL+++TAYI
Sbjct: 119  PVTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYI 178

Query: 558  QPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARHMVIPY 737
            QPP +QL DGPPDIRPAFVHT +TV K+ +  +RRYGVI+CD LVRKGLE+TARHMVIPY
Sbjct: 179  QPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPY 238

Query: 738  MPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDTLGSTR 917
            MPMLVPP+ WTGYDKGAY++LPSYVMR HGARQQRE++KRAPRK L P FEAL+TLG+T+
Sbjct: 239  MPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTK 298

Query: 918  WRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXXXENSE 1097
            WR+NKRVL +IDRIWASGG L DLVDR D+PLPE+PDTEDEA +            ENSE
Sbjct: 299  WRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSE 358

Query: 1098 RHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEG 1277
            RHSQRCD ELKLAVARKMK+E+GFFYPHNLDFRGRAYPMHP+LNHLGSD+CRGILEF+EG
Sbjct: 359  RHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 418

Query: 1278 RPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRWWLNAE 1457
            RPLGKSGL WLKIHLAN++A GVDKL +EGR+AFTENHL+DIFDSADRPLEG+RWWL+AE
Sbjct: 419  RPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAE 478

Query: 1458 DPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 1637
            DPFQCLA CINL+EA+RS SPETTISH+PVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG
Sbjct: 479  DPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 538

Query: 1638 EKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTY 1817
            EKPADVYSGIA RVLDIM+ DAQKDPA  P+ALRARLLI+QVDRKLVKQTVMTSVYGVTY
Sbjct: 539  EKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTY 598

Query: 1818 IGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDCAKLIA 1997
            IGARDQIKRRLKER AI D+ E+F A+CYAAK TLTALG+MFEAARSIMSWLGDCAK+IA
Sbjct: 599  IGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIA 658

Query: 1998 MENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPPNFVHS 2177
             EN PVRW TPLGLPVVQPYRK+GRHLIKTSLQVL+LQ E+DKVMVKRQRTAFPPNFVHS
Sbjct: 659  SENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHS 718

Query: 2178 LDGSHMMMTAI 2210
            LDGSHMMMTA+
Sbjct: 719  LDGSHMMMTAV 729


>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
            gi|557533045|gb|ESR44228.1| hypothetical protein
            CICLE_v10010966mg [Citrus clementina]
          Length = 1030

 Score = 1170 bits (3028), Expect = 0.0
 Identities = 570/737 (77%), Positives = 638/737 (86%), Gaps = 1/737 (0%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELL DMCEQKLAPNLPYMKSLFLGWFEPLR+ IA+EQE  R  K K AYA YFD LPADM
Sbjct: 213  ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADM 272

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            MAVITMHKLM LLM GGEHG ARVVQAAC+IGDAIEQEVRIH FL               
Sbjct: 273  MAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDE 332

Query: 363  XXXSDGNIQ-EQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELI 539
                   +  EQEKLR++VT L+KKQKL AVR+IV  Q +++PWGQDA+AKVGSR+IEL+
Sbjct: 333  EGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKPWGQDARAKVGSRVIELL 392

Query: 540  LQTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTAR 719
             QTAYIQ P +QL D PPDI PAF HT RTV+K+ K  S++YGVI+C+ LV KGLERTAR
Sbjct: 393  TQTAYIQSPADQLVDAPPDIFPAFTHTLRTVSKETKGGSKKYGVIECNPLVLKGLERTAR 452

Query: 720  HMVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALD 899
            HMVIPYMPMLVPPVKWTGYDKGA+ +LPSYVMRTHGA+QQR++VKR P+KQL PVFEALD
Sbjct: 453  HMVIPYMPMLVPPVKWTGYDKGAHFFLPSYVMRTHGAKQQRDTVKRTPKKQLEPVFEALD 512

Query: 900  TLGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXX 1079
            TLG+T+WRVN RVLS++DRIW+ GG L DLVDRND+PLPE+P+TEDEA L          
Sbjct: 513  TLGNTKWRVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEKPETEDEAQLRKWQWKVRNV 572

Query: 1080 XXENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGI 1259
              EN ERHSQRCD ELKL+VARKMK+EEGF+YPHN+DFRGRAYPMHP+LNHLGSD+CRGI
Sbjct: 573  KKENRERHSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGI 632

Query: 1260 LEFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKR 1439
            LEF+EGR LGKSGL WLKIHLANL+A GVDKL HEGR+AFTENHLDDIFDSAD+PLEG+R
Sbjct: 633  LEFAEGRTLGKSGLHWLKIHLANLYAGGVDKLSHEGRLAFTENHLDDIFDSADKPLEGRR 692

Query: 1440 WWLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAA 1619
            WWL AEDPFQCLA CINL EA+RS SPET ISHIPVHQDGSCNGLQHYAALGRD LGAAA
Sbjct: 693  WWLKAEDPFQCLAVCINLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDTLGAAA 752

Query: 1620 VNLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTS 1799
            VNLVA EKPADVYSGIA RVL I++ DAQ+DPAVFPDALRA+LL++QVDRKLVKQTVMTS
Sbjct: 753  VNLVAREKPADVYSGIAARVLVIIRRDAQRDPAVFPDALRAKLLLSQVDRKLVKQTVMTS 812

Query: 1800 VYGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGD 1979
            VYGVTYIGARDQIKRRLKER A  ++AE+FGA+CYAAKVTLTALG+MF+AAR IMSWLG+
Sbjct: 813  VYGVTYIGARDQIKRRLKERGAPMEEAELFGASCYAAKVTLTALGEMFQAARGIMSWLGE 872

Query: 1980 CAKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFP 2159
            CAK+IA EN+PVRWTTPLGLPVVQPYRK+GRH +KTSLQ+LTLQ E++KVMVKRQRTAFP
Sbjct: 873  CAKIIASENQPVRWTTPLGLPVVQPYRKLGRHTVKTSLQILTLQRETEKVMVKRQRTAFP 932

Query: 2160 PNFVHSLDGSHMMMTAI 2210
            PNFVHSLDGSHMMMTA+
Sbjct: 933  PNFVHSLDGSHMMMTAV 949


>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Citrus sinensis]
          Length = 1026

 Score = 1170 bits (3026), Expect = 0.0
 Identities = 570/737 (77%), Positives = 638/737 (86%), Gaps = 1/737 (0%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELL DMCEQKLAPNLPYMKSLFLGWFEPLR+ IA+EQE  R  K K AYA YFD LPADM
Sbjct: 209  ELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHKVAYAPYFDQLPADM 268

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            MAVITMHKLM LLM GGEHG ARVVQAAC+IGDAIEQEVRIH FL               
Sbjct: 269  MAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKEDE 328

Query: 363  XXXSDGNIQ-EQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELI 539
                   +  EQEKLR++VT L+KKQKL AVR+IV  Q +++PWGQDA+AKVGSR+IEL+
Sbjct: 329  EGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKPWGQDARAKVGSRVIELL 388

Query: 540  LQTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTAR 719
             QTAYIQ P +QLAD PPDI PAF H  RTV+K+ K  S++YGVI+C+ LV KGLERTAR
Sbjct: 389  TQTAYIQSPADQLADAPPDIFPAFTHALRTVSKETKGGSKKYGVIECNPLVLKGLERTAR 448

Query: 720  HMVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALD 899
            HMVIPYMPMLVPPVKWTGYDKGA+ +LPSYVMRTHGA+QQR++VKR P+KQL PVFEALD
Sbjct: 449  HMVIPYMPMLVPPVKWTGYDKGAHFFLPSYVMRTHGAKQQRDTVKRTPKKQLEPVFEALD 508

Query: 900  TLGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXX 1079
            TLG+T+WRVN RVLS++DRIW+ GG L DLVDRND+PLPE+P+TEDEA L          
Sbjct: 509  TLGNTKWRVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEKPETEDEAQLRKWQWKVRNV 568

Query: 1080 XXENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGI 1259
              EN ERHSQRCD ELKL+VARKMK+EEGF+YPHN+DFRGRAYPMHP+LNHLGSD+CRGI
Sbjct: 569  KKENRERHSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDLCRGI 628

Query: 1260 LEFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKR 1439
            LEF+EGR LGKSGL WLKIHLANL+A GVDKL HEGR+AFTENHLDDIFDSAD+PLEG+R
Sbjct: 629  LEFAEGRTLGKSGLHWLKIHLANLYAGGVDKLSHEGRLAFTENHLDDIFDSADKPLEGRR 688

Query: 1440 WWLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAA 1619
            WWL AEDPFQCLA CINL EA+RS SPET ISHIPVHQDGSCNGLQHYAALGRD LGAAA
Sbjct: 689  WWLKAEDPFQCLAVCINLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDTLGAAA 748

Query: 1620 VNLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTS 1799
            VNLVA EKPADVYSGIA RVL I++ DAQ+DPAVFPDALRA+LL++QVDRKLVKQTVMTS
Sbjct: 749  VNLVAREKPADVYSGIAARVLVIIQRDAQRDPAVFPDALRAKLLLSQVDRKLVKQTVMTS 808

Query: 1800 VYGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGD 1979
            VYGVTYIGARDQIKRRLKER A  ++AE+FGA+CYAAKVTLTALG+MF+AAR IMSWLG+
Sbjct: 809  VYGVTYIGARDQIKRRLKERGAPMEEAELFGASCYAAKVTLTALGEMFQAARGIMSWLGE 868

Query: 1980 CAKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFP 2159
            CAK+IA EN+PVRWTTPLGLPVVQPYRK+GRH +KTSLQ+LTLQ E++KVMVKRQRTAFP
Sbjct: 869  CAKIIASENQPVRWTTPLGLPVVQPYRKLGRHTVKTSLQILTLQRETEKVMVKRQRTAFP 928

Query: 2160 PNFVHSLDGSHMMMTAI 2210
            PNFVHSLDGSHMMMTA+
Sbjct: 929  PNFVHSLDGSHMMMTAV 945


>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
            X2 [Oryza brachyantha]
          Length = 839

 Score = 1168 bits (3022), Expect = 0.0
 Identities = 564/736 (76%), Positives = 640/736 (86%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELL DMCE KLAPNLPY+KSLFLGWFEPLR++I  EQ+ + + +++A++A+YF+ LPADM
Sbjct: 23   ELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQDLVCERRARASHARYFNMLPADM 82

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            MAVITMHKLM LLM G   G  RV+QAAC IG+AIE EVR+H FL               
Sbjct: 83   MAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRLHKFLEKPKKKRSKEMDNEE 142

Query: 363  XXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELIL 542
                    +EQE+LR++VT LMKK KLR VR IV KQ   +PWGQD  AKVGSRLIEL++
Sbjct: 143  EVGCSDIAKEQERLRKKVTDLMKKHKLRQVRYIVKKQDNSKPWGQDVHAKVGSRLIELMI 202

Query: 543  QTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARH 722
            +TAYIQPP +Q ADGPPDIRPAF H  RTV K+ + SSRRYGVI+CD LVR+GL+RTA+H
Sbjct: 203  ETAYIQPPASQSADGPPDIRPAFTHEMRTVAKEQQKSSRRYGVIKCDPLVRQGLDRTAKH 262

Query: 723  MVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDT 902
            MVIPYMPML+PP+ WTGYDKGA+++LPSYVMRTHGARQQRE+VKRAPR+Q++ VFEALDT
Sbjct: 263  MVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQMQSVFEALDT 322

Query: 903  LGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXX 1082
            LGST+WRVNKRVLSI+DRIW+SGG L DLVDR+D+ LPE+PDTEDEA L           
Sbjct: 323  LGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRSDVALPEKPDTEDEAKLKKWRWNLKAAK 382

Query: 1083 XENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGIL 1262
             ENSERHSQRCD ELKLAVARKMK+EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+CRG+L
Sbjct: 383  KENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVL 442

Query: 1263 EFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRW 1442
            EF+EGRPLGKSGL WLKIHLANL+A GVDKL ++GRIAFTENHL+DIFDSADRPLEGKRW
Sbjct: 443  EFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRW 502

Query: 1443 WLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAV 1622
            WL AEDPFQCLA CINL EA+RSPSPET ISHIPVHQDGSCNGLQHYAALGRDKLGA AV
Sbjct: 503  WLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAV 562

Query: 1623 NLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSV 1802
            NLVAGEKPADVY+GIATRVL+IM+ DA KDPA  PDA RAR+L++QVDRKLVKQTVMTSV
Sbjct: 563  NLVAGEKPADVYTGIATRVLEIMRNDALKDPATDPDAARARMLVDQVDRKLVKQTVMTSV 622

Query: 1803 YGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDC 1982
            YGVTY+GAR+QIKRRLKERD IGDD+E+F A+CYAAKVTLTALG+MF+AARSIM+WLGDC
Sbjct: 623  YGVTYVGAREQIKRRLKERDMIGDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDC 682

Query: 1983 AKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPP 2162
            AK+IA ENEPV+WTTPLGLPVVQPYRK+GRHLIKTSLQVLTLQ E+DKVMVKRQRTAFPP
Sbjct: 683  AKIIACENEPVKWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPP 742

Query: 2163 NFVHSLDGSHMMMTAI 2210
            NFVHSLDGSHMMMTA+
Sbjct: 743  NFVHSLDGSHMMMTAV 758


>gb|EPS71577.1| hypothetical protein M569_03175, partial [Genlisea aurea]
          Length = 966

 Score = 1166 bits (3017), Expect = 0.0
 Identities = 568/736 (77%), Positives = 628/736 (85%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELLN+MCE+KLAPNLPYMKSLFLGWFEPLR KIAEEQE IR GK+K+ YAKYFD LPADM
Sbjct: 151  ELLNEMCERKLAPNLPYMKSLFLGWFEPLRKKIAEEQEAIRNGKNKSTYAKYFDRLPADM 210

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            MAVI MHKLM LLM GGEHG  RVV AAC IGDAIEQE RIHYFL               
Sbjct: 211  MAVIAMHKLMGLLMTGGEHGVVRVVLAACTIGDAIEQEARIHYFLEKTKKKKTGNDAVEE 270

Query: 363  XXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELIL 542
                  +  E++KL +RVTTLMKKQK RA+ QIV   +  QPW  + +AKVGSRLIELI+
Sbjct: 271  PEKLKADRDEEQKLHRRVTTLMKKQKPRAMIQIVKTHVASQPWSVEGRAKVGSRLIELII 330

Query: 543  QTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARH 722
            QTAYIQ P +  +D PP++RPAF+HT RTV ++ K  +RRYGV+QCD LV KGLE+ ARH
Sbjct: 331  QTAYIQSPADPDSDSPPEVRPAFIHTSRTVCRE-KRQTRRYGVVQCDPLVHKGLEKAARH 389

Query: 723  MVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDT 902
            MVIPYMPMLVPPV WTGYDKG Y++LPS VMRTHGA+QQRE+VKR PR+QL PV+EALDT
Sbjct: 390  MVIPYMPMLVPPVNWTGYDKGGYLFLPSQVMRTHGAKQQREAVKRVPREQLYPVYEALDT 449

Query: 903  LGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXX 1082
            LG+T WRVNKRV SI++RIW SGG+L  +VDRNDI  PEQP+TEDE LL           
Sbjct: 450  LGTTGWRVNKRVFSIVERIWGSGGNLAGMVDRNDIAFPEQPETEDETLLKKWKWKVRVVK 509

Query: 1083 XENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGIL 1262
             ENSE+HS RCDTELKLAVARK+K+E+GFFYPHNLDFRGRAYPMHPHLNHLGSDICRGIL
Sbjct: 510  KENSEKHSLRCDTELKLAVARKLKDEDGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGIL 569

Query: 1263 EFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRW 1442
            EFSEGRPLGKSGL WLKIHLANL+ANG+DKL HEGR+AFT+NHLDDI DSADRPLEGKRW
Sbjct: 570  EFSEGRPLGKSGLHWLKIHLANLYANGIDKLSHEGRLAFTDNHLDDICDSADRPLEGKRW 629

Query: 1443 WLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAV 1622
            WL+AEDPFQCLAACI+LAEA+R PSPE +ISHIPVHQDGSCNGLQHYAALGRD LGAAAV
Sbjct: 630  WLSAEDPFQCLAACIDLAEALRCPSPEMSISHIPVHQDGSCNGLQHYAALGRDTLGAAAV 689

Query: 1623 NLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSV 1802
            NLVAGEKPADVY+GIA RVLDIMKEDA+KDPA+FPDALRAR LINQVDRKLVKQTVMTSV
Sbjct: 690  NLVAGEKPADVYTGIANRVLDIMKEDAKKDPAIFPDALRARTLINQVDRKLVKQTVMTSV 749

Query: 1803 YGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDC 1982
            YGVTY+GARDQI +RLKERDAI DD E+FGAACYAAKV L A+GQ+FEAA SIMSWLGDC
Sbjct: 750  YGVTYVGARDQITKRLKERDAIADDVELFGAACYAAKVILKAIGQIFEAAHSIMSWLGDC 809

Query: 1983 AKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPP 2162
            AK IA EN+PV WTTPLGLPVVQPYR   RHLIKTSLQVLTLQ ES+KV+ +RQRTAFPP
Sbjct: 810  AKKIAEENKPVEWTTPLGLPVVQPYRSFSRHLIKTSLQVLTLQRESEKVLARRQRTAFPP 869

Query: 2163 NFVHSLDGSHMMMTAI 2210
            NFVHSLDGSHMMMTA+
Sbjct: 870  NFVHSLDGSHMMMTAV 885


>ref|XP_002331270.1| predicted protein [Populus trichocarpa]
          Length = 847

 Score = 1165 bits (3013), Expect = 0.0
 Identities = 569/738 (77%), Positives = 644/738 (87%), Gaps = 2/738 (0%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELL DMCE KLAPNLPYMK LFLGWFEPLR+ IA+EQE IR+GK++  Y+ YFD LPADM
Sbjct: 30   ELLKDMCEHKLAPNLPYMKGLFLGWFEPLRDAIAKEQESIRRGKTRPDYSPYFDLLPADM 89

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            M+VITMHKL A++MIGGEHG ARVV AAC+IGDAIEQE+RIH FL               
Sbjct: 90   MSVITMHKLTAMVMIGGEHGCARVVAAACMIGDAIEQEIRIHNFLEKTRKKKENADNSKN 149

Query: 363  XXXSDGN--IQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIEL 536
                +    + E+EKLR++VT L+KKQKL AVR+IV    + + W  DAKAKVGSRLIEL
Sbjct: 150  SVEGESPAVMNEEEKLRKKVTDLIKKQKLPAVRKIVKGHDDSKSWSTDAKAKVGSRLIEL 209

Query: 537  ILQTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTA 716
            +LQTAYIQPP +QLAD PPD+RPAFVHTFRTV+ + K +SR+YGVIQCDSLV KGLE+T 
Sbjct: 210  LLQTAYIQPPPDQLADSPPDLRPAFVHTFRTVSYENKKTSRKYGVIQCDSLVLKGLEQTD 269

Query: 717  RHMVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEAL 896
            RH+VIPYMPMLVPP++W GYDKGA+++LPSYVMR HGA+QQRE+VKR P+KQL+ VFEAL
Sbjct: 270  RHIVIPYMPMLVPPLRWRGYDKGAHLFLPSYVMRIHGAKQQREAVKRTPKKQLQLVFEAL 329

Query: 897  DTLGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXX 1076
            DTLG+T+WRVNKRVLS++DRIW +GG L DLVDR+D+PLPE+P+TEDEALL         
Sbjct: 330  DTLGNTKWRVNKRVLSVVDRIWNNGGRLADLVDRSDVPLPEKPETEDEALLKKWKWKVKS 389

Query: 1077 XXXENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRG 1256
               EN ERHS+RCDTELK+AVARKMK EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+CRG
Sbjct: 390  VKKENRERHSRRCDTELKIAVARKMKNEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG 449

Query: 1257 ILEFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGK 1436
            ILEF+EGRPLGKSGL WLKIHLANLFA GVDKL HEGRIAFTENHLDDIFDSAD+PLEGK
Sbjct: 450  ILEFAEGRPLGKSGLRWLKIHLANLFACGVDKLSHEGRIAFTENHLDDIFDSADKPLEGK 509

Query: 1437 RWWLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAA 1616
            RWWL+AEDPFQCLA CINL EA+RS SPET +SHIP+HQDGSCNGLQHYAALGRDKLGAA
Sbjct: 510  RWWLHAEDPFQCLAVCINLTEALRSSSPETCLSHIPIHQDGSCNGLQHYAALGRDKLGAA 569

Query: 1617 AVNLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMT 1796
            AVNLVAGEKP DVYSGIA RVLDIM+ DAQ+DP VFPDALRAR LI+QVDRKLVKQTVMT
Sbjct: 570  AVNLVAGEKPTDVYSGIAARVLDIMRSDAQEDPEVFPDALRARRLISQVDRKLVKQTVMT 629

Query: 1797 SVYGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLG 1976
            SVYGVTYIGARDQI+RRLKER  + D++EIFG +CYAAKVTLTALG+MFEAARSIM+WLG
Sbjct: 630  SVYGVTYIGARDQIERRLKER-GLTDNSEIFGCSCYAAKVTLTALGEMFEAARSIMNWLG 688

Query: 1977 DCAKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAF 2156
            +CAK+IA ENEPVRWTTPLGLPVVQPYRK+G+H+IKTSLQ LTLQ E+DKVMVKRQRTAF
Sbjct: 689  ECAKIIASENEPVRWTTPLGLPVVQPYRKLGKHVIKTSLQFLTLQKETDKVMVKRQRTAF 748

Query: 2157 PPNFVHSLDGSHMMMTAI 2210
            PPNFVHSLDGSHMMMTA+
Sbjct: 749  PPNFVHSLDGSHMMMTAV 766


>dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa Japonica Group]
            gi|48716846|dbj|BAD23544.1| putative phage-type RNA
            polymerase [Oryza sativa Japonica Group]
            gi|215694941|dbj|BAG90132.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 951

 Score = 1162 bits (3005), Expect = 0.0
 Identities = 562/736 (76%), Positives = 639/736 (86%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELL DMC+QKLAPNLPY+KSLFLGWFEPLR++I  EQE + +  ++A++A+YF+ LPADM
Sbjct: 201  ELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGARASHARYFNMLPADM 260

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            MAVITMHKLM LLM G   G  RV+QAAC IG+AIE EVRIH FL               
Sbjct: 261  MAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEE 320

Query: 363  XXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELIL 542
                    +EQE+LR++VT LMKKQK+R VR IV KQ   +PWGQDA AKVGSRLIEL++
Sbjct: 321  EGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMI 380

Query: 543  QTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARH 722
            +TAYIQPP +Q ADGPPDIRPAF H  RTV ++ + SSRRYGVI+CD LVR+GL+RTA+H
Sbjct: 381  ETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKH 440

Query: 723  MVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDT 902
            MVIPYMPML+PP+ WTGYDKGA+++LPSYVMRTHGARQQR++V+RAPR+Q++ VFEAL+T
Sbjct: 441  MVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNT 500

Query: 903  LGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXX 1082
            LGST+WRVNKRVLSI+DRIW+SGG L DLVDR D+ LPE+PDTEDE  L           
Sbjct: 501  LGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAK 560

Query: 1083 XENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGIL 1262
             ENSERHSQRCD ELKLAVARKMK+E+GF+YPHNLDFRGRAYPMHP+LNHLGSD+CRG+L
Sbjct: 561  KENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVL 620

Query: 1263 EFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRW 1442
            EF+EGRPLGKSGL WLKIHLANL+A GVDKL ++GRIAFTENHL+DIFDSADRPLEGKRW
Sbjct: 621  EFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRW 680

Query: 1443 WLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAV 1622
            WL AEDPFQCLA CINL EA+RSPSPET ISHIPVHQDGSCNGLQHYAALGRDKLGA AV
Sbjct: 681  WLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAV 740

Query: 1623 NLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSV 1802
            NLVAGEKPADVY+GIATRV++IMK DA KDPA  PDA RARLL++QVDRKLVKQTVMTSV
Sbjct: 741  NLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSV 800

Query: 1803 YGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDC 1982
            YGVTY+GAR+QIKRRLKERD I DD+E+F A+CYAAKVTLTALG+MF+AARSIM+WLGDC
Sbjct: 801  YGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDC 860

Query: 1983 AKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPP 2162
            AK+IA ENEPVRWTTPLGLPVVQPYRK+GRHLIKTSLQVLTLQ E+DKVMVKRQRTAFPP
Sbjct: 861  AKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPP 920

Query: 2163 NFVHSLDGSHMMMTAI 2210
            NFVHSLDGSHMMMTA+
Sbjct: 921  NFVHSLDGSHMMMTAV 936


>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
            gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
            Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
            single subunit RNA polymerase [Oryza sativa Japonica
            Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
            sativa Japonica Group]
          Length = 1017

 Score = 1162 bits (3005), Expect = 0.0
 Identities = 562/736 (76%), Positives = 639/736 (86%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELL DMC+QKLAPNLPY+KSLFLGWFEPLR++I  EQE + +  ++A++A+YF+ LPADM
Sbjct: 201  ELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGARASHARYFNMLPADM 260

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            MAVITMHKLM LLM G   G  RV+QAAC IG+AIE EVRIH FL               
Sbjct: 261  MAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEE 320

Query: 363  XXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELIL 542
                    +EQE+LR++VT LMKKQK+R VR IV KQ   +PWGQDA AKVGSRLIEL++
Sbjct: 321  EGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMI 380

Query: 543  QTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARH 722
            +TAYIQPP +Q ADGPPDIRPAF H  RTV ++ + SSRRYGVI+CD LVR+GL+RTA+H
Sbjct: 381  ETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKH 440

Query: 723  MVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDT 902
            MVIPYMPML+PP+ WTGYDKGA+++LPSYVMRTHGARQQR++V+RAPR+Q++ VFEAL+T
Sbjct: 441  MVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNT 500

Query: 903  LGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXX 1082
            LGST+WRVNKRVLSI+DRIW+SGG L DLVDR D+ LPE+PDTEDE  L           
Sbjct: 501  LGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAK 560

Query: 1083 XENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGIL 1262
             ENSERHSQRCD ELKLAVARKMK+E+GF+YPHNLDFRGRAYPMHP+LNHLGSD+CRG+L
Sbjct: 561  KENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVL 620

Query: 1263 EFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRW 1442
            EF+EGRPLGKSGL WLKIHLANL+A GVDKL ++GRIAFTENHL+DIFDSADRPLEGKRW
Sbjct: 621  EFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRW 680

Query: 1443 WLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAV 1622
            WL AEDPFQCLA CINL EA+RSPSPET ISHIPVHQDGSCNGLQHYAALGRDKLGA AV
Sbjct: 681  WLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAV 740

Query: 1623 NLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSV 1802
            NLVAGEKPADVY+GIATRV++IMK DA KDPA  PDA RARLL++QVDRKLVKQTVMTSV
Sbjct: 741  NLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSV 800

Query: 1803 YGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDC 1982
            YGVTY+GAR+QIKRRLKERD I DD+E+F A+CYAAKVTLTALG+MF+AARSIM+WLGDC
Sbjct: 801  YGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDC 860

Query: 1983 AKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPP 2162
            AK+IA ENEPVRWTTPLGLPVVQPYRK+GRHLIKTSLQVLTLQ E+DKVMVKRQRTAFPP
Sbjct: 861  AKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPP 920

Query: 2163 NFVHSLDGSHMMMTAI 2210
            NFVHSLDGSHMMMTA+
Sbjct: 921  NFVHSLDGSHMMMTAV 936


>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
          Length = 983

 Score = 1162 bits (3005), Expect = 0.0
 Identities = 562/736 (76%), Positives = 639/736 (86%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELL DMC+QKLAPNLPY+KSLFLGWFEPLR++I  EQE + +  ++A++A+YF+ LPADM
Sbjct: 167  ELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGARASHARYFNMLPADM 226

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            MAVITMHKLM LLM G   G  RV+QAAC IG+AIE EVRIH FL               
Sbjct: 227  MAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEE 286

Query: 363  XXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELIL 542
                    +EQE+LR++VT LMKKQK+R VR IV KQ   +PWGQDA AKVGSRLIEL++
Sbjct: 287  EGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMI 346

Query: 543  QTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARH 722
            +TAYIQPP +Q ADGPPDIRPAF H  RTV ++ + SSRRYGVI+CD LVR+GL+RTA+H
Sbjct: 347  ETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKH 406

Query: 723  MVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDT 902
            MVIPYMPML+PP+ WTGYDKGA+++LPSYVMRTHGARQQR++V+RAPR+Q++ VFEAL+T
Sbjct: 407  MVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNT 466

Query: 903  LGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXX 1082
            LGST+WRVNKRVLSI+DRIW+SGG L DLVDR D+ LPE+PDTEDE  L           
Sbjct: 467  LGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAK 526

Query: 1083 XENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGIL 1262
             ENSERHSQRCD ELKLAVARKMK+E+GF+YPHNLDFRGRAYPMHP+LNHLGSD+CRG+L
Sbjct: 527  KENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVL 586

Query: 1263 EFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRW 1442
            EF+EGRPLGKSGL WLKIHLANL+A GVDKL ++GRIAFTENHL+DIFDSADRPLEGKRW
Sbjct: 587  EFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRW 646

Query: 1443 WLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAV 1622
            WL AEDPFQCLA CINL EA+RSPSPET ISHIPVHQDGSCNGLQHYAALGRDKLGA AV
Sbjct: 647  WLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAV 706

Query: 1623 NLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSV 1802
            NLVAGEKPADVY+GIATRV++IMK DA KDPA  PDA RARLL++QVDRKLVKQTVMTSV
Sbjct: 707  NLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSV 766

Query: 1803 YGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDC 1982
            YGVTY+GAR+QIKRRLKERD I DD+E+F A+CYAAKVTLTALG+MF+AARSIM+WLGDC
Sbjct: 767  YGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDC 826

Query: 1983 AKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPP 2162
            AK+IA ENEPVRWTTPLGLPVVQPYRK+GRHLIKTSLQVLTLQ E+DKVMVKRQRTAFPP
Sbjct: 827  AKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPP 886

Query: 2163 NFVHSLDGSHMMMTAI 2210
            NFVHSLDGSHMMMTA+
Sbjct: 887  NFVHSLDGSHMMMTAV 902


>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
            gi|241924412|gb|EER97556.1| hypothetical protein
            SORBIDRAFT_02g039520 [Sorghum bicolor]
          Length = 976

 Score = 1152 bits (2981), Expect = 0.0
 Identities = 560/737 (75%), Positives = 637/737 (86%), Gaps = 1/737 (0%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELL DMCEQKLAPNLPY+KSLFLGWFEPLR++I  EQE +    S+A++  YF+ LPADM
Sbjct: 159  ELLADMCEQKLAPNLPYIKSLFLGWFEPLRDQIVTEQELVADPGSRASHGPYFNMLPADM 218

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            MAVITMHKLM LLM G   G  RV+QAAC IG+AIE EVRI+ FL               
Sbjct: 219  MAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRINRFLEKTRKKSNKEMEKEE 278

Query: 363  XXXSDGNI-QEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELI 539
                D +I +EQ++LR++VT LMKKQKLR VR IV  Q   +PWGQD +AKVGSRLIEL 
Sbjct: 279  EAAGDTDIAKEQQRLRKKVTDLMKKQKLRQVRNIVKNQDNSRPWGQDVQAKVGSRLIELF 338

Query: 540  LQTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTAR 719
            + TA+IQPP +Q +DG PDIRPAF H  RTV K+ + SSRRYGVI+CD LVR+GL+RTA+
Sbjct: 339  MDTAHIQPPASQSSDGLPDIRPAFRHEMRTVAKEQQKSSRRYGVIKCDPLVRQGLDRTAK 398

Query: 720  HMVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALD 899
            HMVIPYMPML+PP+ WTGYDKGA+++LPSYVMRTHGARQQRE+VKRAPR+Q++ VFEAL+
Sbjct: 399  HMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQMQSVFEALN 458

Query: 900  TLGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXX 1079
            TLGST+WRVNKRVLSI+DRIW+SGG L DLVDR D+PLPE+PDTEDE L+          
Sbjct: 459  TLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVPLPEKPDTEDETLIKNWKWHLRSV 518

Query: 1080 XXENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGI 1259
              ENSERHSQRCD ELKLAVARKMK+EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+CRGI
Sbjct: 519  KKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGI 578

Query: 1260 LEFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKR 1439
            LEF+EGRPLGKSGL WLKIHLANL+A GVDKL ++GR+AFTENHL++IFDSADRPLEGKR
Sbjct: 579  LEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRVAFTENHLEEIFDSADRPLEGKR 638

Query: 1440 WWLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAA 1619
            WWL AEDPFQCLA C+NL EA+RS SPETTISHIPVHQDGSCNGLQHYAALGRDKLGA A
Sbjct: 639  WWLGAEDPFQCLAVCMNLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAIA 698

Query: 1620 VNLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTS 1799
            VNLVAGEKPADVY+GIATRVL+IM+ DAQKDP++ PD  RARL+++QVDRKLVKQTVMTS
Sbjct: 699  VNLVAGEKPADVYTGIATRVLEIMRMDAQKDPSIDPDVARARLIVDQVDRKLVKQTVMTS 758

Query: 1800 VYGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGD 1979
            VYGVTY+GARDQIKRRLKER  I D+AE+FGA+CYAAKVTLTALG+MF+AAR IM+WLGD
Sbjct: 759  VYGVTYVGARDQIKRRLKERGVIPDEAELFGASCYAAKVTLTALGEMFQAARGIMNWLGD 818

Query: 1980 CAKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFP 2159
            CAK+IA ENEPVRWTTPLGLPVVQPYRK+GRHLIKTSLQVLTLQ E+DKVMVKRQRTAFP
Sbjct: 819  CAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFP 878

Query: 2160 PNFVHSLDGSHMMMTAI 2210
            PNFVHSLDGSHMMMTA+
Sbjct: 879  PNFVHSLDGSHMMMTAV 895


>ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Setaria italica]
          Length = 1005

 Score = 1152 bits (2980), Expect = 0.0
 Identities = 558/736 (75%), Positives = 635/736 (86%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELL DMCEQKLAPNLPY+KSLFLGWFEPLR++IA EQE +    S+A++  YF+ LPADM
Sbjct: 189  ELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDQIAAEQELVANRGSRASHGPYFNMLPADM 248

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
            MAVITMHKLM LLM G   G  RV+QAAC IG+AIE EVRIH FL               
Sbjct: 249  MAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHRFLEKTRKKSNKEKENEE 308

Query: 363  XXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELIL 542
                    +EQ++LR++VT LMKKQKLR VR+IV  Q + +PWGQDA AKVGSRLIEL +
Sbjct: 309  EIFDSDIAKEQQRLRKKVTDLMKKQKLRQVRKIVKNQDDSRPWGQDAHAKVGSRLIELFI 368

Query: 543  QTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARH 722
            +TA+IQPP +Q +DG PDIRPAF H  RTV K+ +  SRRYGVI+CD LVR+GL+RTA+H
Sbjct: 369  ETAHIQPPASQSSDGLPDIRPAFRHEMRTVPKEQQKHSRRYGVIKCDPLVRQGLDRTAKH 428

Query: 723  MVIPYMPMLVPPVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFEALDT 902
            MVIPYMPML+PP+ WTGYDKGA+++LPSYVMRTHGARQQRE+VKRAPR+Q++ VFEAL+T
Sbjct: 429  MVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPREQMQSVFEALNT 488

Query: 903  LGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXXXXXX 1082
            LGST+WRVNKRVLSIIDRIW+SGG L DLVDR D+PLPE+PDTEDE +L           
Sbjct: 489  LGSTKWRVNKRVLSIIDRIWSSGGRLADLVDRTDVPLPEKPDTEDETVLKKWRWHTRSVK 548

Query: 1083 XENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGIL 1262
              NSERHSQRCD ELKLAVARKMK+EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+CRG+L
Sbjct: 549  KGNSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVL 608

Query: 1263 EFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLEGKRW 1442
            EF+EGRPLG+SGL WLKIHLANL+A GVDKL + GRIAF ENHL++IFDSADRPLEGKRW
Sbjct: 609  EFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYAGRIAFAENHLEEIFDSADRPLEGKRW 668

Query: 1443 WLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAV 1622
            WL AEDPFQCLA C+NL EA+RSPSPE TISHIPVHQDGSCNGLQHYAALGRDKLGA AV
Sbjct: 669  WLGAEDPFQCLAVCMNLTEALRSPSPEATISHIPVHQDGSCNGLQHYAALGRDKLGAIAV 728

Query: 1623 NLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSV 1802
            NLVAGEKPADVYSGIATRV++IM+ D+QKDP+  PDA RARL+++QVDRKLVKQTVMTSV
Sbjct: 729  NLVAGEKPADVYSGIATRVVEIMRRDSQKDPSTDPDAARARLILDQVDRKLVKQTVMTSV 788

Query: 1803 YGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSWLGDC 1982
            YGVTY+GAR+QIKRRLKER  I DDAE+FGA+CYAAKVTLTALG+MF+AARSIM+WLGDC
Sbjct: 789  YGVTYVGAREQIKRRLKERGVIADDAELFGASCYAAKVTLTALGEMFQAARSIMNWLGDC 848

Query: 1983 AKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRTAFPP 2162
            AK+IA ENEPV+WTTPLGLPVVQPYRK+GRHLIKTSLQVLTLQ E+DKVMVKRQRTAFPP
Sbjct: 849  AKVIACENEPVKWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPP 908

Query: 2163 NFVHSLDGSHMMMTAI 2210
            NFVHSLDGSHMMMTA+
Sbjct: 909  NFVHSLDGSHMMMTAV 924


>gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1100

 Score = 1148 bits (2970), Expect = 0.0
 Identities = 563/740 (76%), Positives = 627/740 (84%), Gaps = 4/740 (0%)
 Frame = +3

Query: 3    ELLNDMCEQKLAPNLPYMKSLFLGWFEPLRNKIAEEQEFIRKGKSKAAYAKYFDHLPADM 182
            ELL DMCE KLAPNLPY+KSLFLGWFEPLR+ I +EQE  R GK +A YA Y D LPADM
Sbjct: 216  ELLMDMCEHKLAPNLPYIKSLFLGWFEPLRDAIIKEQELYRLGKLRAGYAGYLDQLPADM 275

Query: 183  MAVITMHKLMALLMIGGEHGYARVVQAACVIGDAIEQEVRIHYFLXXXXXXXXXXXXXXX 362
             AVITMHKLM LLM GGEHG ARVVQAAC+IGDAIEQEVRIH FL               
Sbjct: 276  TAVITMHKLMGLLMTGGEHGCARVVQAACLIGDAIEQEVRIHKFLEKTKKKRVDKKNEDE 335

Query: 363  XXXSDGNIQEQEKLRQRVTTLMKKQKLRAVRQIVNKQIEYQPWGQDAKAKVGSRLIELIL 542
                +  I+EQEKLR++VT L+KKQKL AVRQIV  Q + +PWGQDAKAKVGS LIEL++
Sbjct: 336  GDKPNAEIKEQEKLRKKVTDLIKKQKLPAVRQIVKGQDDTKPWGQDAKAKVGSHLIELLM 395

Query: 543  QTAYIQPPTNQLADGPPDIRPAFVHTFRTVTKDIKTSSRRYGVIQCDSLVRKGLERTARH 722
            QTAYIQPP +QLAD PPD+RPAFVH+ RTV K+ K + RRYGVI+C+ LVRKGLERT+  
Sbjct: 396  QTAYIQPPADQLADCPPDVRPAFVHSLRTVVKENKKTGRRYGVIECNPLVRKGLERTSMD 455

Query: 723  MVIPYMPMLVP----PVKWTGYDKGAYIYLPSYVMRTHGARQQRESVKRAPRKQLRPVFE 890
                +   L       VKWTGYD+GAY+++PSY+MRTHG +QQRE+VKR PRKQL PVFE
Sbjct: 456  PCKAHGDSLYANVGVKVKWTGYDRGAYLFIPSYIMRTHGVKQQREAVKRTPRKQLEPVFE 515

Query: 891  ALDTLGSTRWRVNKRVLSIIDRIWASGGHLGDLVDRNDIPLPEQPDTEDEALLXXXXXXX 1070
            ALDTLG T+WRVNKRVL+++DRIW SGG L DLVDR D+PLPE+PD+EDEA+L       
Sbjct: 516  ALDTLGCTKWRVNKRVLNVVDRIWTSGGRLADLVDRKDVPLPEKPDSEDEAVLRKWKWKV 575

Query: 1071 XXXXXENSERHSQRCDTELKLAVARKMKEEEGFFYPHNLDFRGRAYPMHPHLNHLGSDIC 1250
                 EN ERHS RCD ELKLAVARKMK+EEGF+YPHNLDFRGRAYPMHP+LNHLGSD+C
Sbjct: 576  RSVKKENRERHSLRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLC 635

Query: 1251 RGILEFSEGRPLGKSGLCWLKIHLANLFANGVDKLPHEGRIAFTENHLDDIFDSADRPLE 1430
            RGILEF EGRPLGKSGL WLKIHLANL+A GVDKL H GR+AF ENHLDDIFDSADRPLE
Sbjct: 636  RGILEFGEGRPLGKSGLRWLKIHLANLYAGGVDKLSHGGRLAFAENHLDDIFDSADRPLE 695

Query: 1431 GKRWWLNAEDPFQCLAACINLAEAMRSPSPETTISHIPVHQDGSCNGLQHYAALGRDKLG 1610
            GKRWWL AEDPFQCLA CINLAEA+RS SPET +SHIPVHQDGSCNGLQHYAALGRDKLG
Sbjct: 696  GKRWWLKAEDPFQCLAVCINLAEALRSSSPETFVSHIPVHQDGSCNGLQHYAALGRDKLG 755

Query: 1611 AAAVNLVAGEKPADVYSGIATRVLDIMKEDAQKDPAVFPDALRARLLINQVDRKLVKQTV 1790
            AA+VNLVAGEKPADVYSGIA RVLDI++ DAQKDPAVFPDAL A++L+NQVDRKLVKQTV
Sbjct: 756  AASVNLVAGEKPADVYSGIAARVLDIIRRDAQKDPAVFPDALHAKVLVNQVDRKLVKQTV 815

Query: 1791 MTSVYGVTYIGARDQIKRRLKERDAIGDDAEIFGAACYAAKVTLTALGQMFEAARSIMSW 1970
            MTSVYGVTYIGARDQIKRRLKER  I DD EIFGA+CYAAK TLTALG+MF+AAR+IM+W
Sbjct: 816  MTSVYGVTYIGARDQIKRRLKERGVITDDKEIFGASCYAAKTTLTALGEMFQAARAIMNW 875

Query: 1971 LGDCAKLIAMENEPVRWTTPLGLPVVQPYRKVGRHLIKTSLQVLTLQHESDKVMVKRQRT 2150
            LG+CAK+IA EN+PVRWTTPLGLPVVQPYR +GRHLIKTSLQVLTLQ E++KVMVKRQRT
Sbjct: 876  LGECAKIIASENQPVRWTTPLGLPVVQPYRVLGRHLIKTSLQVLTLQRETEKVMVKRQRT 935

Query: 2151 AFPPNFVHSLDGSHMMMTAI 2210
            AFPPNFVHSLDGSHMMMTA+
Sbjct: 936  AFPPNFVHSLDGSHMMMTAV 955