BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00017856
         (851 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004232117.1| PREDICTED: pentatricopeptide repeat-containi...   207   4e-51
ref|XP_006338305.1| PREDICTED: pentatricopeptide repeat-containi...   200   6e-49
emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]   186   1e-44
emb|CBI16896.3| unnamed protein product [Vitis vinifera]              184   5e-44
ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containi...   184   5e-44
ref|XP_002532891.1| hypothetical protein RCOM_0447050 [Ricinus c...   182   1e-43
gb|EMJ16204.1| hypothetical protein PRUPE_ppa002414mg [Prunus pe...   181   3e-43
ref|XP_002882233.1| pentatricopeptide repeat-containing protein ...   171   4e-40
ref|XP_004306041.1| PREDICTED: pentatricopeptide repeat-containi...   169   9e-40
gb|EXB85825.1| hypothetical protein L484_009671 [Morus notabilis]     166   8e-39
gb|ABD96873.1| hypothetical protein [Cleome spinosa]                  164   4e-38
ref|XP_002305305.1| pentatricopeptide repeat-containing family p...   161   3e-37
ref|XP_002305302.1| predicted protein [Populus trichocarpa]           161   3e-37
ref|NP_186898.1| pentatricopeptide repeat-containing protein [Ar...   161   3e-37
gb|EOX92255.1| Pentatricopeptide repeat (PPR) superfamily protei...   160   4e-37
ref|XP_006297147.1| hypothetical protein CARUB_v10013150mg [Caps...   160   4e-37
ref|XP_006430875.1| hypothetical protein CICLE_v10011236mg [Citr...   160   7e-37
ref|XP_006482336.1| PREDICTED: pentatricopeptide repeat-containi...   159   9e-37
ref|XP_006373506.1| pentatricopeptide repeat-containing family p...   157   4e-36
ref|XP_002329308.1| predicted protein [Populus trichocarpa]           154   5e-35

>ref|XP_004232117.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Solanum lycopersicum]
          Length = 651

 Score =  207 bits (527), Expect = 4e-51
 Identities = 122/251 (48%), Positives = 164/251 (65%), Gaps = 12/251 (4%)
 Frame = -2

Query: 718 MRNQ--WLRLLLIRCNTPSQPYIS---------QVHH-LRSFTSSLLHSRASLVTPIPFV 575
           MRNQ  WL LLL+R ++ +QP+IS         QV+  + S  SS +HSRAS + P   +
Sbjct: 1   MRNQQQWL-LLLLRHHSLAQPHISRHLINQSPFQVNRSISSIASSTIHSRASHMLPYQSL 59

Query: 574 FGHHFTSSPELAVEPPKTPSDQATLLADIFATPGRSSDEIKLDLDLKSVVITHDMILSFL 395
             H F++S ELAVE     SDQ  +L  IF+ P RS++EIK+DL+  +V +THD+++  L
Sbjct: 60  TVHSFSTS-ELAVE--HKVSDQIAVLTGIFSKPNRSNEEIKIDLESNNVTVTHDLVIRAL 116

Query: 394 RNPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIGIMKKKGYGV 215
           R+ +T PD A++ F+WV E +SE+LSSK YN MLGIL   GFVKE W M+ IMK KGYGV
Sbjct: 117 RSFNTAPDAARKFFNWVKENESERLSSKVYNYMLGILGSNGFVKEFWSMVEIMKSKGYGV 176

Query: 214 VKGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCSRISNIIRRE 35
            +G F +  ERF+K+ L  DVEKLK+LY S             N+ + VCSR+ N+IR  
Sbjct: 177 SRGTFNRAIERFEKEKLSGDVEKLKKLYGSELAG---------NSSEEVCSRVCNLIRGN 227

Query: 34  VWGDDVEKELQ 2
           VWGDDVEK+L+
Sbjct: 228 VWGDDVEKQLR 238


>ref|XP_006338305.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Solanum tuberosum]
          Length = 651

 Score =  200 bits (508), Expect = 6e-49
 Identities = 119/252 (47%), Positives = 162/252 (64%), Gaps = 13/252 (5%)
 Frame = -2

Query: 718 MRNQ--WLRLLLIRCNTPSQPYISQVHHLR-----------SFTSSLLHSRASLVTPIPF 578
           MRNQ  WL LLL+R ++ +QP+IS+ HH+            +  SS +HSR S + P   
Sbjct: 1   MRNQQRWL-LLLLRHHSLAQPHISR-HHINQSPFQVNRSVSTIASSTIHSRTSHMLPYQS 58

Query: 577 VFGHHFTSSPELAVEPPKTPSDQATLLADIFATPGRSSDEIKLDLDLKSVVITHDMILSF 398
           +    F++S ELAVE     SDQ  +L  IF+ P RS++EIKLDL+  +V +THD+++  
Sbjct: 59  LTVRSFSTS-ELAVE--HKDSDQIAVLTGIFSKPNRSNEEIKLDLESNNVTVTHDLVIRA 115

Query: 397 LRNPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIGIMKKKGYG 218
           LR+ +T PD A ++F+WV E +SE+LSSK YN MLGIL   GFVKE W M+ IMK KGYG
Sbjct: 116 LRSFNTAPDAAHKLFNWVKENESERLSSKVYNYMLGILGSNGFVKEFWIMVEIMKSKGYG 175

Query: 217 VVKGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCSRISNIIRR 38
           V +G F +  E+F+K+ L  D+EKLK+LY S     +  D S E     VCSR+  +IR 
Sbjct: 176 VSRGTFNRAIEKFEKEKLSGDLEKLKKLYGS-----ELADNSSEE----VCSRVCKLIRG 226

Query: 37  EVWGDDVEKELQ 2
            VWGDDVEK+L+
Sbjct: 227 NVWGDDVEKQLR 238


>emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]
          Length = 650

 Score =  186 bits (471), Expect = 1e-44
 Identities = 112/253 (44%), Positives = 154/253 (60%), Gaps = 15/253 (5%)
 Frame = -2

Query: 718 MRNQWLRLLLIRCNTPSQPYISQVHHLRSFTSSLLHSRASLVTPIPFVFGHHF---TSSP 548
           MRNQW RLLL+R ++ S   IS  H    F     HS  +L     F+ GH       S 
Sbjct: 1   MRNQW-RLLLLRTHSRSPLSIS--HIFSHFPVKSDHSSQTLRFFSSFLQGHSHHCVIDST 57

Query: 547 ELA-VEPPKTPSDQATL-----------LADIFATPGRSSDEIKLDLDLKSVVITHDMIL 404
           EL     P++ S  + L             DIF+ P +  DEIK +++   +V++H+++L
Sbjct: 58  ELRNFSGPRSRSFSSDLALEDKGLDHVVFTDIFSKP-KGFDEIKNEVESSDIVVSHELVL 116

Query: 403 SFLRNPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIGIMKKKG 224
             L N +++P+VA+ VFDWVL  +SE+LSSKSYNLMLGIL   GFV E WD++ +MKKKG
Sbjct: 117 KVLENLESNPEVARXVFDWVLRAESERLSSKSYNLMLGILGSNGFVSEFWDLVEVMKKKG 176

Query: 223 YGVVKGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCSRISNII 44
           YGV K A+VK  E F+K+ L  D+EKL+ L+ASGSV         +N++  +CSR+S II
Sbjct: 177 YGVSKAAYVKALENFEKEALGSDLEKLRGLFASGSV---------DNSIQKICSRVSKII 227

Query: 43  RREVWGDDVEKEL 5
           R EVWGD+VE +L
Sbjct: 228 RSEVWGDNVEGQL 240


>emb|CBI16896.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  184 bits (466), Expect = 5e-44
 Identities = 111/253 (43%), Positives = 154/253 (60%), Gaps = 15/253 (5%)
 Frame = -2

Query: 718 MRNQWLRLLLIRCNTPSQPYISQVHHLRSFTSSLLHSRASLVTPIPFVFGHHF---TSSP 548
           MRNQW RLLL+R ++ S   IS  H    F     HS  +L     F+ GH       S 
Sbjct: 1   MRNQW-RLLLLRTHSRSPLSIS--HIFSHFPVKSDHSSQTLRFFSSFLQGHSHHCVIDST 57

Query: 547 ELA-VEPPKTPSDQATL-----------LADIFATPGRSSDEIKLDLDLKSVVITHDMIL 404
           EL     P++ S  + L             DIF+ P +  DEIK +++   +V++H+++L
Sbjct: 58  ELRNFSGPRSRSFSSDLALEDKGLDHVVFTDIFSKP-KGFDEIKNEVESSDIVVSHELVL 116

Query: 403 SFLRNPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIGIMKKKG 224
             L N +++P+VA+ VFDWVL  +SE+LSSKSYNLMLGIL   GFV E WD++ +MKKKG
Sbjct: 117 KVLENLESNPEVARSVFDWVLRAESERLSSKSYNLMLGILGSNGFVSEFWDLVEVMKKKG 176

Query: 223 YGVVKGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCSRISNII 44
           YGV K A+VK  E F+K+ L  D+EKL+ L+ASGSV         ++++  +CSR+S II
Sbjct: 177 YGVSKAAYVKALENFEKEALGSDLEKLRGLFASGSV---------DDSIQKICSRVSKII 227

Query: 43  RREVWGDDVEKEL 5
           R EVWGD+VE +L
Sbjct: 228 RSEVWGDNVEGQL 240


>ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Vitis vinifera]
          Length = 650

 Score =  184 bits (466), Expect = 5e-44
 Identities = 111/253 (43%), Positives = 154/253 (60%), Gaps = 15/253 (5%)
 Frame = -2

Query: 718 MRNQWLRLLLIRCNTPSQPYISQVHHLRSFTSSLLHSRASLVTPIPFVFGHHF---TSSP 548
           MRNQW RLLL+R ++ S   IS  H    F     HS  +L     F+ GH       S 
Sbjct: 1   MRNQW-RLLLLRTHSRSPLSIS--HIFSHFPVKSDHSSQTLRFFSSFLQGHSHHCVIDST 57

Query: 547 ELA-VEPPKTPSDQATL-----------LADIFATPGRSSDEIKLDLDLKSVVITHDMIL 404
           EL     P++ S  + L             DIF+ P +  DEIK +++   +V++H+++L
Sbjct: 58  ELRNFSGPRSRSFSSDLALEDKGLDHVVFTDIFSKP-KGFDEIKNEVESSDIVVSHELVL 116

Query: 403 SFLRNPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIGIMKKKG 224
             L N +++P+VA+ VFDWVL  +SE+LSSKSYNLMLGIL   GFV E WD++ +MKKKG
Sbjct: 117 KVLENLESNPEVARSVFDWVLRAESERLSSKSYNLMLGILGSNGFVSEFWDLVEVMKKKG 176

Query: 223 YGVVKGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCSRISNII 44
           YGV K A+VK  E F+K+ L  D+EKL+ L+ASGSV         ++++  +CSR+S II
Sbjct: 177 YGVSKAAYVKALENFEKEALGSDLEKLRGLFASGSV---------DDSIQKICSRVSKII 227

Query: 43  RREVWGDDVEKEL 5
           R EVWGD+VE +L
Sbjct: 228 RSEVWGDNVEGQL 240


>ref|XP_002532891.1| hypothetical protein RCOM_0447050 [Ricinus communis]
           gi|223527351|gb|EEF29496.1| hypothetical protein
           RCOM_0447050 [Ricinus communis]
          Length = 375

 Score =  182 bits (463), Expect = 1e-43
 Identities = 108/259 (41%), Positives = 156/259 (60%), Gaps = 20/259 (7%)
 Frame = -2

Query: 718 MRNQWLRLLLIRCNTPSQPYISQVHHLRSFTSSLLHSRASLVTPIPFVFGHH-------- 563
           MR+ W RLLL R N P     +  HH +  +SSL H R SL +   F    H        
Sbjct: 1   MRHSW-RLLLFR-NYPRSSLRTHQHHFQVHSSSLSHIR-SLYSLHTFSQQSHLLEFKNNK 57

Query: 562 ------------FTSSPELAVEPPKTPSDQATLLADIFATPGRSSDEIKLDLDLKSVVIT 419
                       F+S   +  E  K P  Q  L++DIF T     ++I  DL+L +VV+ 
Sbjct: 58  RINLNKGPTAYNFSSDALIESENKKEPDPQCLLISDIF-TKFSDVNDITKDLELNNVVVD 116

Query: 418 HDMILSFLRNPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIGI 239
           H+++L  L   + +PDVA++ FDWVLE  SE+LSSK+YNLML +L   GFV+E WD++ I
Sbjct: 117 HELVLKVLNFLECNPDVARKFFDWVLEKDSERLSSKAYNLMLKVLGFNGFVEEFWDLVEI 176

Query: 238 MKKKGYGVVKGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCSR 59
           MKKKGYGV +G   K++E+F+KDGL  D+EKLKE++ASGSV         +++++ +  R
Sbjct: 177 MKKKGYGVSRGTRDKVAEKFEKDGLKSDLEKLKEVFASGSV---------DHSLEKIALR 227

Query: 58  ISNIIRREVWGDDVEKELQ 2
           +S I+R +VWG+DVEK+++
Sbjct: 228 MSRIVRNQVWGEDVEKQIK 246


>gb|EMJ16204.1| hypothetical protein PRUPE_ppa002414mg [Prunus persica]
          Length = 675

 Score =  181 bits (459), Expect = 3e-43
 Identities = 112/260 (43%), Positives = 155/260 (59%), Gaps = 22/260 (8%)
 Frame = -2

Query: 718 MRNQWLRLLLIRCNTPSQPYI------SQVHH------LRSFTSSL-LHSRASLVTPIPF 578
           MR+QW RLLL+R +  S P++      SQVH       L S TS    H+    ++P   
Sbjct: 1   MRHQW-RLLLLRAHHRSSPHVFVKCCYSQVHSQPNLHSLSSLTSHFHTHTLDPKLSPSHP 59

Query: 577 VFGHHFTS--------SPELAVEPPKTPSDQAT-LLADIFATPGRSSDEIKLDLDLKSVV 425
           VF  H T+        S  L+ EP     D     +A+IFA   R  D+I+ DL+L +VV
Sbjct: 60  VFNSHLTTPINPRNPLSRSLSSEPALELKDSDHGAIAEIFAKH-RGVDDIRKDLELNNVV 118

Query: 424 ITHDMILSFLRNPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMI 245
           I+HD++L  L++ +++PDVA+R FDWVL  + E+LSSKSYN MLGI    G V E WD++
Sbjct: 119 ISHDLVLRVLKSLESNPDVARRFFDWVLACEGERLSSKSYNFMLGIFGVNGCVSEFWDLV 178

Query: 244 GIMKKKGYGVVKGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVC 65
            +MKKKGYGV K    K  E+F+KDGL  DVEKL+ ++ASGS          +N+ D +C
Sbjct: 179 DVMKKKGYGVSKWVQDKALEKFEKDGLGGDVEKLRVVFASGST---------DNSPDKIC 229

Query: 64  SRISNIIRREVWGDDVEKEL 5
           SR+  I+R EVW  DVE+++
Sbjct: 230 SRVCKIVRNEVWSGDVERKI 249


>ref|XP_002882233.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328073|gb|EFH58492.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 667

 Score =  171 bits (432), Expect = 4e-40
 Identities = 106/260 (40%), Positives = 149/260 (57%), Gaps = 21/260 (8%)
 Frame = -2

Query: 718 MRNQWLRLLLIRC-NTPSQPYISQVHH---------LRSFTSSL--------LHSRASLV 593
           MR QW RLLL R   + S P++S  HH          RSF+S L        L  R  L+
Sbjct: 1   MRYQWRRLLLFRSYRSSSHPFLS--HHSQFQVISNSTRSFSSFLPERFEVGALQQRQCLL 58

Query: 592 ---TPIPFVFGHHFTSSPELAVEPPKTPSDQATLLADIFATPGRSSDEIKLDLDLKSVVI 422
              +P+       F+S P +  +PP       T++ DIF+    + D+I+ +LD   VVI
Sbjct: 59  ALRSPLTSSVSRSFSSDPAIEEKPPAE-----TVVIDIFSRLS-AKDDIRKELDSNDVVI 112

Query: 421 THDMILSFLRNPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIG 242
           +H++ L  LR  ++ PDVA   F WVLE    KLSSKSYN ML IL   G V E W+++ 
Sbjct: 113 SHELALRVLRELESSPDVAGSFFKWVLEAYPRKLSSKSYNTMLRILGVNGLVDEFWELVD 172

Query: 241 IMKKKGYGVVKGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCS 62
            MKKKG+GV      K+ ++FQKDGL+ D+E+LKE++ASGS+         +N+VD VC+
Sbjct: 173 AMKKKGHGVSANVRNKVGDKFQKDGLESDLERLKEIFASGSM---------DNSVDKVCN 223

Query: 61  RISNIIRREVWGDDVEKELQ 2
           R+  I+ +EVW  DVEK+L+
Sbjct: 224 RVCKIVMKEVWSADVEKQLR 243


>ref|XP_004306041.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 660

 Score =  169 bits (429), Expect = 9e-40
 Identities = 96/254 (37%), Positives = 148/254 (58%), Gaps = 15/254 (5%)
 Frame = -2

Query: 718 MRNQWLRLLLIRCNTPSQPYI-------------SQVHHLRSFTSSLLHSRASLVTPI-P 581
           MR+ W RLL +R +  S P++             S +H    F +  LH +   + PI  
Sbjct: 1   MRHPWQRLLRLRSHLRSSPHVRSQSSSHSQVISQSNLHSFSLFHTHTLHPKLPTLPPIFN 60

Query: 580 FVFGHHFTSSPELAVEPPKTPSDQAT-LLADIFATPGRSSDEIKLDLDLKSVVITHDMIL 404
           +        S  L+ EP     D    ++A++F+   R   +++ +L+L +V  THD++L
Sbjct: 61  YPLNPRNPISRRLSSEPEIESKDPGHGVIAEVFSK-ARDEIDVRKELELHNVEFTHDVVL 119

Query: 403 SFLRNPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIGIMKKKG 224
           S L++ ++ PDVA+RVFDWVL  + E+L SKSYN ML +L   G V+E W+M+ +MKKKG
Sbjct: 120 SVLKSLESSPDVARRVFDWVLVNEGERLGSKSYNQMLCVLGVNGAVEEFWEMVSVMKKKG 179

Query: 223 YGVVKGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCSRISNII 44
           YGV +  + ++ E+F +DGL+ D EKL+ ++ASGSV     DGS   A    C R+  I+
Sbjct: 180 YGVSRWVYDRVLEKFVEDGLESDAEKLRNVFASGSV-----DGSVAKA----CQRVCKIV 230

Query: 43  RREVWGDDVEKELQ 2
           R EVW DDVE++++
Sbjct: 231 REEVWSDDVERQIR 244


>gb|EXB85825.1| hypothetical protein L484_009671 [Morus notabilis]
          Length = 662

 Score =  166 bits (421), Expect = 8e-39
 Identities = 103/237 (43%), Positives = 142/237 (59%), Gaps = 13/237 (5%)
 Frame = -2

Query: 673 PSQPYISQVHHLRSFTSSLLHSRASLVTPIP----FVFGH---------HFTSSPELAVE 533
           PSQP ++    LRS TS LLHSR+ L T  P    F   H          F+S PEL   
Sbjct: 32  PSQPNLNS---LRSLTS-LLHSRSPLGTLSPSQSIFAIDHINPGIQRFQKFSSEPELE-- 85

Query: 532 PPKTPSDQATLLADIFATPGRSSDEIKLDLDLKSVVITHDMILSFLRNPDTDPDVAKRVF 353
                SDQA +++DI +    +S+EIK DL+   +VI+HD+IL  L   ++ PDVA+R F
Sbjct: 86  --SRDSDQAVIVSDILSK-SNNSEEIKKDLESNGIVISHDLILGVLGKLESSPDVARRFF 142

Query: 352 DWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIGIMKKKGYGVVKGAFVKISERFQK 173
            WVLE + ++LSSKSYNLML IL   GF  E W ++  MKKKGY + KG    + E+F++
Sbjct: 143 SWVLENEEKRLSSKSYNLMLRILGVNGFANEFWVLLEGMKKKGYLISKGVRDNVLEKFEE 202

Query: 172 DGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCSRISNIIRREVWGDDVEKELQ 2
           +GLD DVE+L  ++ SGS++         N+   + S +  IIR EVWGD+VEK+L+
Sbjct: 203 EGLDGDVERLNAVFDSGSIN---------NSEKKISSMVCRIIRNEVWGDNVEKQLR 250


>gb|ABD96873.1| hypothetical protein [Cleome spinosa]
          Length = 666

 Score =  164 bits (415), Expect = 4e-38
 Identities = 111/264 (42%), Positives = 144/264 (54%), Gaps = 25/264 (9%)
 Frame = -2

Query: 718 MRNQWLRLLLIRCNTPSQ-PYISQVHH-------LRSFTS---------SLLHSRASLVT 590
           MR+QW RLLL R    S  PY S   H       LRS +S         +L  ++  LV 
Sbjct: 1   MRHQW-RLLLHRSYRRSHLPYPSASSHFQVTSISLRSLSSFLRPRPGDGALEQTKQPLVL 59

Query: 589 PIPFV--------FGHHFTSSPELAVEPPKTPSDQATLLADIFATPGRSSDEIKLDLDLK 434
             P             +F+S P + V+P    SD  T++ D+F+      DEIK  LDL 
Sbjct: 60  QSPLACSVSLVKSVSRNFSSEPAIDVKP----SDDVTVI-DVFSRLS-DKDEIKKLLDLS 113

Query: 433 SVVITHDMILSFLRNPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETW 254
            +VI HD+ L  LR   + PD AKR F WV E  + KLSSKSYN+ML IL   GFV E W
Sbjct: 114 GIVINHDLGLKVLRGLQSRPDAAKRFFQWVTEADAAKLSSKSYNMMLRILGVNGFVDEFW 173

Query: 253 DMIGIMKKKGYGVVKGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVD 74
            ++  MKKKGYGV      K+ E+FQKDGL  D+E+LKEL+ASGS+         +N+ +
Sbjct: 174 GLVVDMKKKGYGVSANVRDKVGEKFQKDGLQGDLERLKELFASGSM---------DNSAE 224

Query: 73  LVCSRISNIIRREVWGDDVEKELQ 2
            VC R+  I+ +E W DDVEK L+
Sbjct: 225 KVCHRVCKIVLKEEWSDDVEKRLR 248


>ref|XP_002305305.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222848269|gb|EEE85816.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 646

 Score =  161 bits (407), Expect = 3e-37
 Identities = 89/192 (46%), Positives = 127/192 (66%)
 Frame = -2

Query: 577 VFGHHFTSSPELAVEPPKTPSDQATLLADIFATPGRSSDEIKLDLDLKSVVITHDMILSF 398
           +F  +F+S   L VEP K P D   L+ D F T     D+I  +L+L SVVI+HD++L  
Sbjct: 67  LFARNFSSEASL-VEPTKDP-DHVLLVCDAF-TKFDEFDDISKELELNSVVISHDLVLKV 123

Query: 397 LRNPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIGIMKKKGYG 218
           L++ ++ P+VAKR FDWVLE  S +LSSKSYN MLGIL   G V E WD++  MK KG+G
Sbjct: 124 LKSLESKPEVAKRFFDWVLEKDSGRLSSKSYNWMLGILGVNGLVVEFWDLVDKMKIKGHG 183

Query: 217 VVKGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCSRISNIIRR 38
           V      ++ E+F+K+GL+DD+EKLK ++A GSV         +N+V+ +  R+S I+R 
Sbjct: 184 VSGVTRDRVQEKFEKEGLNDDLEKLKGVFAKGSV---------DNSVEKIGLRVSRIVRN 234

Query: 37  EVWGDDVEKELQ 2
           +VWG+DVE E++
Sbjct: 235 KVWGEDVEGEIK 246


>ref|XP_002305302.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  161 bits (407), Expect = 3e-37
 Identities = 89/192 (46%), Positives = 127/192 (66%)
 Frame = -2

Query: 577 VFGHHFTSSPELAVEPPKTPSDQATLLADIFATPGRSSDEIKLDLDLKSVVITHDMILSF 398
           +F  +F+S   L VEP K P D   L+ D F T     D+I  +L+L SVVI+HD++L  
Sbjct: 36  LFARNFSSEASL-VEPTKDP-DHVLLVCDAF-TKFDEFDDISKELELNSVVISHDLVLKV 92

Query: 397 LRNPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIGIMKKKGYG 218
           L++ ++ P+VAKR FDWVLE  S +LSSKSYN MLGIL   G V E WD++  MK KG+G
Sbjct: 93  LKSLESKPEVAKRFFDWVLEKDSGRLSSKSYNWMLGILGVNGLVVEFWDLVDKMKIKGHG 152

Query: 217 VVKGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCSRISNIIRR 38
           V      ++ E+F+K+GL+DD+EKLK ++A GSV         +N+V+ +  R+S I+R 
Sbjct: 153 VSGVTRDRVQEKFEKEGLNDDLEKLKGVFAKGSV---------DNSVEKIGLRVSRIVRN 203

Query: 37  EVWGDDVEKELQ 2
           +VWG+DVE E++
Sbjct: 204 KVWGEDVEGEIK 215


>ref|NP_186898.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75264846|sp|Q9M891.1|PP208_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g02490, mitochondrial; Flags: Precursor
           gi|6957712|gb|AAF32456.1| unknown protein [Arabidopsis
           thaliana] gi|51536500|gb|AAU05488.1| At3g02490
           [Arabidopsis thaliana] gi|56381951|gb|AAV85694.1|
           At3g02490 [Arabidopsis thaliana]
           gi|332640296|gb|AEE73817.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  161 bits (407), Expect = 3e-37
 Identities = 104/257 (40%), Positives = 148/257 (57%), Gaps = 18/257 (7%)
 Frame = -2

Query: 718 MRNQWLRLLLIRCNTPSQPYISQVHH---------LRSFTSSLLHSRA---------SLV 593
           MR QW  LL     +  +P++S  HH          RSF SS LH R          +L 
Sbjct: 1   MRYQWRSLLFRSYRSSPRPFLS--HHSRFQVISNSTRSF-SSFLHERFGVQQRQCLFALR 57

Query: 592 TPIPFVFGHHFTSSPELAVEPPKTPSDQATLLADIFATPGRSSDEIKLDLDLKSVVITHD 413
           +P+       F+S  E A+E  K P++  T++ D+F+      DEI  +LD   VVI+H+
Sbjct: 58  SPLASSVSRRFSS--ESAIEE-KLPAE--TVVIDVFSRLN-GKDEITKELDSNDVVISHE 111

Query: 412 MILSFLRNPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIGIMK 233
           + L  LR  ++ PDVA R F W LE   +KLSSKSYN ML I    G V E W ++  MK
Sbjct: 112 LALRVLRELESSPDVAGRFFKWGLEAYPQKLSSKSYNTMLRIFGVNGLVDEFWRLVDDMK 171

Query: 232 KKGYGVVKGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCSRIS 53
           KKG+GV      ++ ++F+KDGL++D+E+LKEL+ASGS+         +N+VD VC+R+ 
Sbjct: 172 KKGHGVSANVRDRVGDKFKKDGLENDLERLKELFASGSM---------DNSVDKVCNRVC 222

Query: 52  NIIRREVWGDDVEKELQ 2
            I+ +EVWG DVEK+L+
Sbjct: 223 KIVMKEVWGADVEKQLR 239


>gb|EOX92255.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao]
          Length = 660

 Score =  160 bits (406), Expect = 4e-37
 Identities = 86/189 (45%), Positives = 124/189 (65%)
 Frame = -2

Query: 568 HHFTSSPELAVEPPKTPSDQATLLADIFATPGRSSDEIKLDLDLKSVVITHDMILSFLRN 389
           +H + S E AVE  K P      +  IF T     ++IK +L+L  VV +HDMIL  LRN
Sbjct: 70  NHCSFSSEAAVEE-KEPDHVLVTVTGIF-TRLNDRNDIKRELELNDVVFSHDMILKVLRN 127

Query: 388 PDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIGIMKKKGYGVVK 209
            ++ PDVA+R FD +LE+  EKLSSKSYNLMLGIL   G V+E W ++ +MK+KGYG+  
Sbjct: 128 VESSPDVARRFFDCILESNLEKLSSKSYNLMLGILGVNGLVEEFWSLVDVMKQKGYGISG 187

Query: 208 GAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCSRISNIIRREVW 29
           G   +++ +F+KD L+ D+E+LK ++ASGSV         +++++  CSR+  I+R  VW
Sbjct: 188 GVRDRVAAKFEKDVLESDLERLKGVFASGSV---------DSSMEKFCSRVCKIVRSNVW 238

Query: 28  GDDVEKELQ 2
           GDDVE+ L+
Sbjct: 239 GDDVEERLR 247


>ref|XP_006297147.1| hypothetical protein CARUB_v10013150mg [Capsella rubella]
           gi|482565856|gb|EOA30045.1| hypothetical protein
           CARUB_v10013150mg [Capsella rubella]
          Length = 666

 Score =  160 bits (406), Expect = 4e-37
 Identities = 98/258 (37%), Positives = 140/258 (54%), Gaps = 19/258 (7%)
 Frame = -2

Query: 718 MRNQWLRLLLIRCNTPSQPYISQVHHL-------RSFTSSLLHSRA------------SL 596
           MR QW  LL   C + ++P++S            RSF SSLLH R+            + 
Sbjct: 1   MRYQWRFLLFRSCRSSNRPFLSHQTQFQVISSSTRSF-SSLLHERSVVGALQQRQCLFNF 59

Query: 595 VTPIPFVFGHHFTSSPELAVEPPKTPSDQATLLADIFATPGRSSDEIKLDLDLKSVVITH 416
            +P+       F+S P +  +PP         + D+F+       EI+ +LD   +VI+H
Sbjct: 60  QSPLASSVSRSFSSEPAIKAKPPAE-----AFVIDVFSRLN-GKYEIRKELDSNDIVISH 113

Query: 415 DMILSFLRNPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIGIM 236
           D+ L  LR  ++ PDVA R F WV +    KLSSKSYN ML IL   G V E W +   M
Sbjct: 114 DLALRVLRELESRPDVAGRFFQWVSDAYPRKLSSKSYNAMLRILGVNGLVDEFWKLADAM 173

Query: 235 KKKGYGVVKGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCSRI 56
           KK G+GV      ++ E+FQKDG++ D+E+LKEL+ASGS+         +N+VD VC+R+
Sbjct: 174 KKIGHGVSASVRDRVGEKFQKDGMEGDLERLKELFASGSM---------DNSVDKVCNRV 224

Query: 55  SNIIRREVWGDDVEKELQ 2
             I+ +EVW  DVEK+L+
Sbjct: 225 CKIVMKEVWSADVEKQLR 242


>ref|XP_006430875.1| hypothetical protein CICLE_v10011236mg [Citrus clementina]
           gi|557532932|gb|ESR44115.1| hypothetical protein
           CICLE_v10011236mg [Citrus clementina]
          Length = 671

 Score =  160 bits (404), Expect = 7e-37
 Identities = 95/250 (38%), Positives = 151/250 (60%), Gaps = 3/250 (1%)
 Frame = -2

Query: 742 QIPFESDTMRNQWLRLLLIRCNTPSQPYISQVHHLRSFTSSLLHSRA-SLVTPIPFVFGH 566
           Q+PF  +   ++ L  L     T S  + S+   L      + HSR  +L+ P    F +
Sbjct: 28  QVPFNPNLTLHESLHTLSSLLPTSSHTFYSRFSRL-----PICHSRLINLIDPKNPNFRN 82

Query: 565 HF--TSSPELAVEPPKTPSDQATLLADIFATPGRSSDEIKLDLDLKSVVITHDMILSFLR 392
               + S E A+E  ++     T+++DIF      +D I   L+L  VV TH+M+L  L+
Sbjct: 83  PMICSYSSEPAIEQKES---DFTVVSDIFYKFSDVND-ISKQLELSGVVFTHEMVLKVLK 138

Query: 391 NPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIGIMKKKGYGVV 212
           N ++ PD A+R F+WVLE +SE+LSSK+YNLML I+   G V+E W ++ +MKKKGYGV 
Sbjct: 139 NLESSPDEARRFFNWVLEKESERLSSKTYNLMLRIVGVHGLVQEFWGLVDVMKKKGYGVA 198

Query: 211 KGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCSRISNIIRREV 32
                K++E+F+K+GL+ D+EKLK ++A+GS+         +N+++ V SRI  ++R ++
Sbjct: 199 SHVRNKMTEKFEKEGLESDLEKLKGIFATGSI---------DNSIEKVASRICKVVRSDI 249

Query: 31  WGDDVEKELQ 2
           WGDDVE++L+
Sbjct: 250 WGDDVERQLR 259


>ref|XP_006482336.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Citrus sinensis]
          Length = 671

 Score =  159 bits (403), Expect = 9e-37
 Identities = 95/250 (38%), Positives = 150/250 (60%), Gaps = 3/250 (1%)
 Frame = -2

Query: 742 QIPFESDTMRNQWLRLLLIRCNTPSQPYISQVHHLRSFTSSLLHSR-ASLVTPIPFVFGH 566
           Q+PF  +   ++ L  L     T S  + S+   L      + HSR  +L+ P    F +
Sbjct: 28  QVPFNPNLTLHESLHTLSSLLPTSSHAFYSRFSRL-----PICHSRFINLIDPKNPNFRN 82

Query: 565 HF--TSSPELAVEPPKTPSDQATLLADIFATPGRSSDEIKLDLDLKSVVITHDMILSFLR 392
               + S E A+E  ++     T++ DIF      +D I   L+L  VV TH+M+L  L+
Sbjct: 83  PMICSYSSEPAIEQKES---DFTVVGDIFYKFSDVTD-ISKQLELSGVVFTHEMVLKVLK 138

Query: 391 NPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIGIMKKKGYGVV 212
           N ++ PD A+R F+WVLE +SE+LSSK+YNLML I+   G V+E W ++ +MKKKGYGV 
Sbjct: 139 NLESSPDEARRFFNWVLEKESERLSSKTYNLMLRIVGVHGLVQEFWGLVDVMKKKGYGVA 198

Query: 211 KGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCSRISNIIRREV 32
                K++E+F+K+GL+ D+EKLK ++A+GS+         +N+++ V SRI  ++R ++
Sbjct: 199 SHVRNKMTEKFEKEGLESDLEKLKGIFATGSI---------DNSIEKVASRICKVVRSDI 249

Query: 31  WGDDVEKELQ 2
           WGDDVE++L+
Sbjct: 250 WGDDVERQLR 259


>ref|XP_006373506.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550320328|gb|ERP51303.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 658

 Score =  157 bits (398), Expect = 4e-36
 Identities = 86/192 (44%), Positives = 125/192 (65%)
 Frame = -2

Query: 577 VFGHHFTSSPELAVEPPKTPSDQATLLADIFATPGRSSDEIKLDLDLKSVVITHDMILSF 398
           +F  + +S P L VEP K P D   L+ D+F T    SD+I  +L+L SVVI+HD++L  
Sbjct: 66  LFARNLSSEPSL-VEPTKDP-DLVLLVCDVF-TKFEDSDDINKELELSSVVISHDLVLKV 122

Query: 397 LRNPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIGIMKKKGYG 218
           L++  + P VAKR FDWVL+  SE+LSSKSYN MLGIL   G V E W+++  MK KGYG
Sbjct: 123 LKSLGSKPGVAKRFFDWVLKKDSERLSSKSYNWMLGILGVNGLVAEFWELVDKMKTKGYG 182

Query: 217 VVKGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCSRISNIIRR 38
           V      ++ E+F+ +GL  D+EKLK ++A+GS+         +N+V+ +  R+S I+R 
Sbjct: 183 VSGVTRDRVLEKFENEGLKGDIEKLKGVFATGSI---------DNSVEKIGLRMSRIVRS 233

Query: 37  EVWGDDVEKELQ 2
           + WG+DVE E++
Sbjct: 234 KFWGEDVEGEIK 245


>ref|XP_002329308.1| predicted protein [Populus trichocarpa]
          Length = 658

 Score =  154 bits (388), Expect = 5e-35
 Identities = 85/192 (44%), Positives = 124/192 (64%)
 Frame = -2

Query: 577 VFGHHFTSSPELAVEPPKTPSDQATLLADIFATPGRSSDEIKLDLDLKSVVITHDMILSF 398
           +F  + +S   L VEP K P D   L+ D+F T    SD+I  +L+L SVVI+HD++L  
Sbjct: 66  LFARNLSSEASL-VEPTKDP-DLVLLVCDVF-TKFDDSDDINKELELSSVVISHDLVLKV 122

Query: 397 LRNPDTDPDVAKRVFDWVLETQSEKLSSKSYNLMLGILVRGGFVKETWDMIGIMKKKGYG 218
           L++  + P VAKR FDWVL+  SE+LSSKSYN MLGIL   G V E W+++  MK KGYG
Sbjct: 123 LKSLGSKPGVAKRFFDWVLKKDSERLSSKSYNWMLGILGVNGLVAEFWELVDKMKTKGYG 182

Query: 217 VVKGAFVKISERFQKDGLDDDVEKLKELYASGSVSCKKTDGSKENAVDLVCSRISNIIRR 38
           V      ++ E+F+ +GL  D+EKLK ++A+GS+         +N+V+ +  R+S I+R 
Sbjct: 183 VSGVTRDRVLEKFENEGLKGDIEKLKGVFATGSI---------DNSVEKIGLRMSRIVRS 233

Query: 37  EVWGDDVEKELQ 2
           + WG+DVE E++
Sbjct: 234 KFWGEDVEGEIK 245