BLASTX nr result
ID: Rehmannia25_contig00017621
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00017621
(947 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659... 248 2e-63
ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668... 207 5e-51
ref|XP_006595271.1| PREDICTED: uncharacterized protein LOC100781... 197 4e-48
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 184 3e-44
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 184 3e-44
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 183 1e-43
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 183 1e-43
ref|XP_004240779.1| PREDICTED: uncharacterized protein LOC101256... 180 8e-43
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 172 2e-40
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 169 1e-39
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 169 2e-39
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 169 2e-39
ref|XP_002331746.1| predicted protein [Populus trichocarpa] 168 3e-39
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 167 5e-39
ref|NP_175044.1| DNAse I-like superfamily protein [Arabidopsis t... 161 3e-37
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 159 1e-36
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 159 1e-36
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 159 1e-36
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 159 1e-36
gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thal... 154 5e-35
>ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659506 [Glycine max]
Length = 964
Score = 248 bits (633), Expect = 2e-63
Identities = 119/315 (37%), Positives = 195/315 (61%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQSHYRGTAQFILCQQLKGL 182
SDH+P VV+ G +P++F N++ +H +F ++V DGW+ + G + F +C++LK L
Sbjct: 593 SDHTPLVVTTELVVPRGNSPFKFNNLIVDHPNFLRIVADGWKQNIHGCSMFKVCKKLKAL 652
Query: 183 KDNLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKAE 362
K LK L ++ FS+IS+R + A+ + P D + + R ++ L KAE
Sbjct: 653 KAPLKNLFKQEFSNISNRVELAEAEYNSVLNSIKQNPQDPSLLALANRTRGQTIMLRKAE 712
Query: 363 KLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIEF 542
+ + Q K YL+Q+DKC++FFH+++KRN FIA+I +DG+ T SQD++AL F+
Sbjct: 713 SMKFAQLIKNKYLLQADKCSKFFHALIKRNKHSRFIAAIRLEDGHNTSSQDEIALAFVNH 772
Query: 543 YKQLLGTKQNTQPPDPEIIGNGPLLDETQGSDLIKPITNSEILDALRDIGDDRSPGSDGY 722
++ + TQ P I GP + + L+ P + ++ + + + ++++PG DG+
Sbjct: 773 FRNFFSAHELTQTPSISICNRGPKVPTDCFAALLCPTSKQKVWNIISVMANNKAPGPDGF 832
Query: 723 SSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRPIACCK 902
+ FFKK+W VG+ + AV EFF++G +LKQ NH I+ LIPK D +S+V FRPI+CC
Sbjct: 833 NVLFFKKAWNIVGDDIFAAVNEFFTTGKILKQLNHAIIVLIPKHDQASQVNHFRPISCCN 892
Query: 903 VIYKLISKILATRMA 947
++YK++SKILA R+A
Sbjct: 893 LLYKIVSKILANRIA 907
>ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668020 [Glycine max]
Length = 603
Score = 207 bits (527), Expect = 5e-51
Identities = 110/316 (34%), Positives = 175/316 (55%), Gaps = 1/316 (0%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQSHYRGTAQFILCQQLKGL 182
SDH+P VV+ G +P++F N + +H +F ++V DGW+ + G + F
Sbjct: 91 SDHTPLVVTTELVVPRGNSPFKFNNAIVDHPNFLRIVADGWKQNIHGCSMF--------- 141
Query: 183 KD-NLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKA 359
KD +L AL + R ++ L K
Sbjct: 142 KDPSLLALANR--------------------------------------TRGQTIMLRKT 163
Query: 360 EKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIE 539
E L + Q K YL+Q+DKC++FFH+++KRN FIA+I +DG+ T SQD++AL F+
Sbjct: 164 ESLKFSQLIKNKYLLQADKCSKFFHALIKRNIHSRFIAAIRLEDGHKTSSQDEIALAFVN 223
Query: 540 FYKQLLGTKQNTQPPDPEIIGNGPLLDETQGSDLIKPITNSEILDALRDIGDDRSPGSDG 719
++ L + TQ P I GP + + L+ P + E+ + + + ++++PG DG
Sbjct: 224 HFRNLFSAHELTQTPSISICNRGPKVPIDCFAALLCPTSKQEVWNVISVMDNNKAPGPDG 283
Query: 720 YSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRPIACC 899
++ FFKK+W +G+ + +AV EFF++G +LKQ NH I+ALIPK D +S+V FRPI+CC
Sbjct: 284 FNVLFFKKAWNIIGDDIFEAVNEFFTTGKILKQLNHAIIALIPKHDQASQVNHFRPISCC 343
Query: 900 KVIYKLISKILATRMA 947
++YK++SKILA R+A
Sbjct: 344 NLLYKIVSKILANRIA 359
>ref|XP_006595271.1| PREDICTED: uncharacterized protein LOC100781932 [Glycine max]
Length = 952
Score = 197 bits (502), Expect = 4e-48
Identities = 97/285 (34%), Positives = 168/285 (58%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQSHYRGTAQFILCQQLKGL 182
SDH+P VV+ G +P++F N + +H +F ++V DGW+ + G + F +C++LK L
Sbjct: 668 SDHTPLVVTTKLVVPRGNSPFKFNNAIVDHPNFSRIVADGWKQNIHGCSMFKVCKKLKVL 727
Query: 183 KDNLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKAE 362
K +LK L ++ FS+IS+R + A+ + P D + + R ++ K E
Sbjct: 728 KASLKNLFKQEFSNISNRVELAEVEYNSVLNSLKQNPQDHSLLALANRTRGQTIMFRKVE 787
Query: 363 KLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIEF 542
+ + Q K YL+Q D C++FFH+++KRN FIA+I +DG+ T SQD++AL F+
Sbjct: 788 SMKFAQLIKNRYLLQVDICSKFFHALIKRNRHSRFIAAIRLEDGHNTSSQDEIALAFVNH 847
Query: 543 YKQLLGTKQNTQPPDPEIIGNGPLLDETQGSDLIKPITNSEILDALRDIGDDRSPGSDGY 722
++ L + TQ P I G + + ++ P + E+ + + + ++++PG +G+
Sbjct: 848 FRNLFSAHELTQTPSISICNRGLKVPTDCFATILCPTSKQEVWNVIFVMDNNKAPGPNGF 907
Query: 723 SSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSD 857
++ FFKK+W +G+ + +AV EFF++ +LKQ NH I+ALIPK D
Sbjct: 908 NALFFKKAWNIIGDDIFEAVNEFFTTRKILKQINHAIIALIPKHD 952
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 184 bits (468), Expect = 3e-44
Identities = 102/315 (32%), Positives = 168/315 (53%), Gaps = 1/315 (0%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQSHYRGTAQFILCQQLKGL 182
SDHSP + +L H G P++F N LA+ + F +VV++ W S + +L+ +
Sbjct: 225 SDHSPLIFNLATQHDEGGRPFKFLNFLADQNGFVEVVKEAWGSANHRFKMKNIWVRLQAV 284
Query: 183 KDNLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKAE 362
K LK+ + K FS + + + KL Q L + E++ + +L S +
Sbjct: 285 KRALKSFHSKKFSKAHCQVEELRRKLAAVQAL-PEVSQVSELQEEEKDLIAQLRKWSTID 343
Query: 363 KLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIEF 542
+ +QK++ +L D ++FF + +K +N I + D G+ ++ E F
Sbjct: 344 ESILKQKSRIQWLSLGDSNSKFFFTAIKVRKARNKIVLLQNDRGDQLTENTEIQNEICNF 403
Query: 543 YKQLLGTKQNT-QPPDPEIIGNGPLLDETQGSDLIKPITNSEILDALRDIGDDRSPGSDG 719
Y++LLGT + + D ++ G L T + L++PIT EI AL DI D ++PG DG
Sbjct: 404 YRRLLGTSSSQLEAIDLHVVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTKAPGLDG 463
Query: 720 YSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRPIACC 899
++S FFKKSW + +++ + + +FF +G + K N T + LIPK D + D+RPIACC
Sbjct: 464 FNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRPIACC 523
Query: 900 KVIYKLISKILATRM 944
+YK+ISKIL R+
Sbjct: 524 STLYKIISKILTKRL 538
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 184 bits (468), Expect = 3e-44
Identities = 102/315 (32%), Positives = 172/315 (54%), Gaps = 1/315 (0%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQSHYRGTAQFILCQQLKGL 182
SDHSP + +L G P++F N++AE +F + V+ W S + LK +
Sbjct: 222 SDHSPLLFNLMTGRPQGGKPFKFMNVMAEQGEFLETVEKAWNSVNGRFKLQAIWLNLKAV 281
Query: 183 KDNLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKAE 362
K LK + + + K+ + +L++ Q DF H+ +++ + + S E
Sbjct: 282 KRELKQMKTQKIGLAHEKVKNLRHQLQDLQSQ-DDFDHNDIMQTDAKSIMNDLRHWSHIE 340
Query: 363 KLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIEF 542
QQK++ +L Q D ++ F + VK N I + +DG D+V E +EF
Sbjct: 341 DSILQQKSRITWLQQGDTNSKLFFTAVKARHAINRIDMLNTEDGRVIQDADEVQEEILEF 400
Query: 543 YKQLLGTKQNT-QPPDPEIIGNGPLLDETQGSDLIKPITNSEILDALRDIGDDRSPGSDG 719
YK+LLGT+ +T D + G L LI+ + ++EI +AL IG+D++PG DG
Sbjct: 401 YKKLLGTRASTLMGVDLNTVRGGKCLSAQAKESLIREVASTEIDEALAGIGNDKAPGLDG 460
Query: 720 YSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRPIACC 899
+++ FFKKSW ++ +++ ++EFF++ + + N ++ L+PK H+++V +FRPIACC
Sbjct: 461 FNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIACC 520
Query: 900 KVIYKLISKILATRM 944
VIYK+ISK+L RM
Sbjct: 521 TVIYKIISKMLTNRM 535
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 183 bits (464), Expect = 1e-43
Identities = 110/320 (34%), Positives = 178/320 (55%), Gaps = 6/320 (1%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQS-HYRGTAQFILCQQLKG 179
SDH C V L S K P++FFN L ++ DF VV D W S + G++ + + ++LK
Sbjct: 89 SDHVSCGVVLEANGISAKRPFKFFNFLLKNEDFLNVVMDNWFSTNVVGSSMYRVSKKLKA 148
Query: 180 LKDNLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKA 359
+K +K + ++S I R K A E L Q L P + + LE ++ + LS A
Sbjct: 149 MKKPIKDFSRLNYSGIELRTKEAHELLITCQNLTLANP-SVSNAALELEAQRKWVLLSCA 207
Query: 360 EKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIE 539
E+ F+ Q+++ ++ + D T +FH +V N I S+V +G SQ + +
Sbjct: 208 EESFFHQRSRVSWFAEGDSNTHYFHRMVDSRKSFNTINSLVDSNGLLIDSQQGILDHCVT 267
Query: 540 FYKQLLGTKQNTQPPDPEIIGNGPLL-----DETQGSDLIKPITNSEILDALRDIGDDRS 704
+Y++LLG+ ++ + E + LL + Q S+L K T+ EI A + + +++
Sbjct: 268 YYERLLGSIESPFSMEQEDMN---LLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKT 324
Query: 705 PGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFR 884
G DGYS FF+ +W+ +G +V A+ EFF SG LLKQWN T L LIPK+ ++ + +FR
Sbjct: 325 SGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFR 384
Query: 885 PIACCKVIYKLISKILATRM 944
PI+C +YK+ISK+L +R+
Sbjct: 385 PISCLNTLYKVISKLLTSRL 404
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 183 bits (464), Expect = 1e-43
Identities = 110/320 (34%), Positives = 178/320 (55%), Gaps = 6/320 (1%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQS-HYRGTAQFILCQQLKG 179
SDH C V L S K P++FFN L ++ DF VV D W S + G++ + + ++LK
Sbjct: 89 SDHVSCGVVLEANGISAKRPFKFFNFLLKNEDFLNVVMDNWFSTNVVGSSMYRVSKKLKA 148
Query: 180 LKDNLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKA 359
+K +K + ++S I R K A E L Q L P + + LE ++ + LS A
Sbjct: 149 MKKPIKDFSRLNYSGIELRTKEAHELLITCQNLTLANP-SVSNAALELEAQRKWVLLSCA 207
Query: 360 EKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIE 539
E+ F+ Q+++ ++ + D T +FH +V N I S+V +G SQ + +
Sbjct: 208 EESFFHQRSRVSWFAEGDSNTHYFHRMVDSRKSFNTINSLVDSNGLLIDSQQGILDHCVT 267
Query: 540 FYKQLLGTKQNTQPPDPEIIGNGPLL-----DETQGSDLIKPITNSEILDALRDIGDDRS 704
+Y++LLG+ ++ + E + LL + Q S+L K T+ EI A + + +++
Sbjct: 268 YYERLLGSIESPFSMEQEDMN---LLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKT 324
Query: 705 PGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFR 884
G DGYS FF+ +W+ +G +V A+ EFF SG LLKQWN T L LIPK+ ++ + +FR
Sbjct: 325 SGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFR 384
Query: 885 PIACCKVIYKLISKILATRM 944
PI+C +YK+ISK+L +R+
Sbjct: 385 PISCLNTLYKVISKLLTSRL 404
>ref|XP_004240779.1| PREDICTED: uncharacterized protein LOC101256493 [Solanum
lycopersicum]
Length = 441
Score = 180 bits (456), Expect = 8e-43
Identities = 106/313 (33%), Positives = 175/313 (55%), Gaps = 3/313 (0%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQSHYRGTAQFILCQQLKGL 182
SDHS + L ++ + ++FFN+ EH F +V+ W+ A + +LK L
Sbjct: 130 SDHSTMQLVLHQSNQHVRASFKFFNIWTEHDLFLDLVEKVWKQEKDRDAIKKVWYKLKAL 189
Query: 183 KDNLKALNEKHFSHISSRAKHAKEKLKETQ-KLFHDFPHDLEIRSQLLELRKNSLFLSKA 359
+ LK LN K F +IS++ + A+ +L + Q +L H +L + + L + L L K
Sbjct: 190 QPVLKQLNRKEFKYISNQIEEARNELIDIQNQLCHQAKDELVTKEKELLTKLEKLSLIKE 249
Query: 360 EKLFYQQKAKCNYLIQSDKCTRFFHSIVK-RNAKKNFIASIVRDDGNPTVSQDQVALEFI 536
L +QK + ++ D ++ S++K RN KKN I ++ DG ++ EF+
Sbjct: 250 SAL--RQKVRAKWIKLGDANNKYLSSVIKERNHKKN-IRILMSLDGRKLSEPQEIQDEFV 306
Query: 537 EFYKQLLGTKQNTQPP-DPEIIGNGPLLDETQGSDLIKPITNSEILDALRDIGDDRSPGS 713
F K L+GT N + +++ GP+L L IT+ EI++AL+ IG++++PG
Sbjct: 307 LFDKSLMGTAANNLSAINVQVMKRGPVLSRQHRIQLCATITDQEIVEALKSIGNEKAPGI 366
Query: 714 DGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRPIA 893
DGY++ FFK +W + V DAVK FF++G L K +N T++ +IPK V ++RPIA
Sbjct: 367 DGYNALFFKHTWKIIEHDVIDAVKSFFTTGKLFKPFNCTLVTVIPKVHSPKNVKEYRPIA 426
Query: 894 CCKVIYKLISKIL 932
CC+V+YK+ISK++
Sbjct: 427 CCRVLYKIISKVI 439
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 172 bits (436), Expect = 2e-40
Identities = 104/322 (32%), Positives = 173/322 (53%), Gaps = 8/322 (2%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQS-HYRGTAQFILCQQLKG 179
SDH C V L +T K P++FFN L ++ DF +V+D W + + G++ F + ++LK
Sbjct: 229 SDHVSCGVVLEETSIKAKRPFKFFNYLLKNLDFLNLVRDNWFTLNVVGSSMFRVSKKLKA 288
Query: 180 LKDNLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKA 359
LK +K + ++S + R K A + L Q P + +L RK + L+ A
Sbjct: 289 LKKPIKDFSRLNYSELEKRTKEAHDFLIGCQDRTLADPTPINASFELEAERKWHI-LTAA 347
Query: 360 EKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIE 539
E+ F++QK++ ++ + D T++FH + N I+++ +G SQ+ +
Sbjct: 348 EESFFRQKSRISWFAEGDGNTKYFHRMADARNSSNSISALYDGNGKLVDSQEGILDLCAS 407
Query: 540 FYKQLLGTKQNTQPPDPEIIGNGPL-------LDETQGSDLIKPITNSEILDALRDIGDD 698
++ LLG + DP ++ + Q +L +N +I AL + +
Sbjct: 408 YFGSLLGDEV-----DPYLMEQNDMNLLLSYRCSPAQVCELESTFSNEDIRAALFSLPRN 462
Query: 699 RSPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGD 878
+S G DG+++ FF SW+ VG +V DA+KEFFSSGCLLKQWN T + LIPK + + D
Sbjct: 463 KSCGPDGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSD 522
Query: 879 FRPIACCKVIYKLISKILATRM 944
FRPI+C +YK+I+++L R+
Sbjct: 523 FRPISCLNTLYKVIARLLTDRL 544
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 169 bits (428), Expect = 1e-39
Identities = 98/321 (30%), Positives = 162/321 (50%), Gaps = 7/321 (2%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQSHYRGTAQFILCQQLKGL 182
SDH + + S P+RF M D+ +V+ W + + G+ F Q+ K +
Sbjct: 227 SDHCQISLEYLANNKSKAPPFRFEKMWCTRKDYDSLVKRTWCTKFYGSHMFNFVQKCKLV 286
Query: 183 KDNLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKAE 362
K N K N+ F +I + + E+L+E Q+ ++ +++Q LFL+K
Sbjct: 287 KINSKEWNKTQFGNIFRQLRQVDERLEEIQRNLLIDHNNTSLKTQ------QELFLAKRN 340
Query: 363 KL------FYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVA 524
KL +++QK K ++++ D ++F+H+ +N I + D+ P D +
Sbjct: 341 KLLEYNTTYWKQKCKSDFMVLGDTNSKFYHTHASIRKYRNQIKEFIPDNAQPITQPDLIE 400
Query: 525 LEF-IEFYKQLLGTKQNTQPPDPEIIGNGPLLDETQGSDLIKPITNSEILDALRDIGDDR 701
E + F K+ + + + P++ E + L ++ EI +A+ D+ D+
Sbjct: 401 KEITLAFKKRFISNPACKFNQNVDFNLLSPIVSEADNAYLTSAVSPEEIKNAVFDLAPDK 460
Query: 702 SPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDF 881
SPG DG+ FF+K WT +G+ VC AV+ FF SG +LK+ NHT LALIPK D F
Sbjct: 461 SPGPDGFPPYFFQKYWTLIGKSVCRAVQAFFHSGYMLKEVNHTFLALIPKVDKPVNANHF 520
Query: 882 RPIACCKVIYKLISKILATRM 944
RPI+ C IYK+ISKI+ R+
Sbjct: 521 RPISLCSTIYKVISKIITNRL 541
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 893
Score = 169 bits (427), Expect = 2e-39
Identities = 108/323 (33%), Positives = 172/323 (53%), Gaps = 9/323 (2%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQS-HYRGTAQFILCQQLKG 179
SDHS C V L K P+RFFN + DF Q++++ W S + G+A + + ++LK
Sbjct: 226 SDHSSCEVVLDPAVLKAKRPFRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVSKKLKH 285
Query: 180 LKDNLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKA 359
LK + + +++S I R A + Q++ P + +L RK + L+KA
Sbjct: 286 LKLPICCFSRENYSDIEKRVSEAHAIVLHRQRITLTNPSVVHATLELEATRKWQI-LAKA 344
Query: 360 EKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIE 539
E+ F+ QK+ ++L + D T +FH + N I ++ D G +Q + E
Sbjct: 345 EESFFCQKSSISWLYEGDNNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIKEGIKE 404
Query: 540 ----FYKQLL----GTKQNTQPPDPEIIGNGPLLDETQGSDLIKPITNSEILDALRDIGD 695
F++ LL G Q ++ +D+ +DL + ++ +I +A +
Sbjct: 405 HSCNFFESLLCGVEGENSLAQSDMNLLLSFRCSVDQI--NDLERSFSDLDIQEAFFSLPR 462
Query: 696 DRSPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVG 875
+++ G DGYSS FFK W VG +V +AV+EFF SG LLKQWN T L LIPK +SSK+
Sbjct: 463 NKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMT 522
Query: 876 DFRPIACCKVIYKLISKILATRM 944
DFRPI+C +YK+I+K+L +R+
Sbjct: 523 DFRPISCLNTLYKVIAKLLTSRL 545
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 169 bits (427), Expect = 2e-39
Identities = 108/323 (33%), Positives = 172/323 (53%), Gaps = 9/323 (2%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQS-HYRGTAQFILCQQLKG 179
SDHS C V L K P+RFFN + DF Q++++ W S + G+A + + ++LK
Sbjct: 226 SDHSSCEVVLDPAVLKAKRPFRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVSKKLKH 285
Query: 180 LKDNLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKA 359
LK + + +++S I R A + Q++ P + +L RK + L+KA
Sbjct: 286 LKLPICCFSRENYSDIEKRVSEAHAIVLHRQRITLTNPSVVHATLELEATRKWQI-LAKA 344
Query: 360 EKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIE 539
E+ F+ QK+ ++L + D T +FH + N I ++ D G +Q + E
Sbjct: 345 EESFFCQKSSISWLYEGDNNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIKEGIKE 404
Query: 540 ----FYKQLL----GTKQNTQPPDPEIIGNGPLLDETQGSDLIKPITNSEILDALRDIGD 695
F++ LL G Q ++ +D+ +DL + ++ +I +A +
Sbjct: 405 HSCNFFESLLCGVEGENSLAQSDMNLLLSFRCSVDQI--NDLERSFSDLDIQEAFFSLPR 462
Query: 696 DRSPGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVG 875
+++ G DGYSS FFK W VG +V +AV+EFF SG LLKQWN T L LIPK +SSK+
Sbjct: 463 NKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMT 522
Query: 876 DFRPIACCKVIYKLISKILATRM 944
DFRPI+C +YK+I+K+L +R+
Sbjct: 523 DFRPISCLNTLYKVIAKLLTSRL 545
>ref|XP_002331746.1| predicted protein [Populus trichocarpa]
Length = 503
Score = 168 bits (425), Expect = 3e-39
Identities = 96/304 (31%), Positives = 160/304 (52%), Gaps = 2/304 (0%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQSHYRGTAQFILCQQLKGL 182
SDHSP VV + + K P+RFF+M + + G + LC LK L
Sbjct: 209 SDHSPMVVKVIGNDQNIKKPFRFFDMWMDQNS-------------GGCPMYQLCCNLKKL 255
Query: 183 KDNLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKAE 362
K LK N HFS+IS R K AK ++ + Q+ H + + + ++ +AE
Sbjct: 256 KQELKLFNMAHFSNISDRVKDAKNEMDKAQQALHTAHENPILCMRERDVVHKYASTVRAE 315
Query: 363 KLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIEF 542
+ F++QKA+ +L D+ T +FH V +N + S+ R+DG + V E I +
Sbjct: 316 ESFFKQKARIQWLSLGDQNTSYFHKSVNGRHNRNKLLSLTREDGEVVEGHEAVKSEVIAY 375
Query: 543 YKQLLGTKQNTQPPDPEIIGNGP--LLDETQGSDLIKPITNSEILDALRDIGDDRSPGSD 716
+ ++LG Q + + E++ + L TQ L + +T EI A+ + ++++PG D
Sbjct: 376 FHRVLGVDQMPRVLNEEVMESAINLKLSSTQQHVLAQVVTRKEIKHAMFSLKNNKAPGLD 435
Query: 717 GYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRPIAC 896
G+++ FFK+ W VGE V +AV+ F + +LK+ N T ++LIPK + +++ DFRPI+C
Sbjct: 436 GFNAGFFKRMWHIVGEDVINAVRSLFQTRRMLKEMNATSISLIPKVANPTRLTDFRPISC 495
Query: 897 CKVI 908
C +
Sbjct: 496 CNTV 499
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 167 bits (423), Expect = 5e-39
Identities = 98/318 (30%), Positives = 163/318 (51%), Gaps = 4/318 (1%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQS-HYRGTAQFILCQQLKG 179
SDH P V++ + P++ N L H +F + ++ W Y+G+A F L ++ K
Sbjct: 227 SDHCPSCVNISNQSGGRNKPFKLSNFLMHHPEFIEKIRVTWDRLAYQGSAMFTLSKKSKF 286
Query: 180 LKDNLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKA 359
LK ++ N +H+S + R A + LK Q P + E ++ L+ A
Sbjct: 287 LKGTIRTFNREHYSGLEKRVVQAAQNLKTCQNNLLAAPSSY-LAGLEKEAHRSWAELALA 345
Query: 360 EKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIE 539
E+ F QK++ +L D T FFH ++ N I ++ G + D++ ++
Sbjct: 346 EERFLCQKSRVLWLKCGDSNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQTHCVD 405
Query: 540 FYKQLLGTKQNTQPPDPEIIGNGPL---LDETQGSDLIKPITNSEILDALRDIGDDRSPG 710
F+K+L G+ + + N DE L ++ ++I + ++SPG
Sbjct: 406 FFKELFGSSSHLISAEGISQINSLTRFKCDENTRQLLEAEVSEADIKSEFFALPSNKSPG 465
Query: 711 SDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRPI 890
DGY+S FFKK+W+ VG + AV+EFF SG LL QWN T + ++PK ++ ++ +FRPI
Sbjct: 466 PDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPI 525
Query: 891 ACCKVIYKLISKILATRM 944
+CC IYK+ISK+LA R+
Sbjct: 526 SCCNAIYKVISKLLARRL 543
>ref|NP_175044.1| DNAse I-like superfamily protein [Arabidopsis thaliana]
gi|332193872|gb|AEE31993.1| DNAse I-like superfamily
protein [Arabidopsis thaliana]
Length = 626
Score = 161 bits (408), Expect = 3e-37
Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 4/311 (1%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQSHYR-GTAQFILCQQLKG 179
SDHSPC++ L + K +R+F+ L+ H F + W+ G+ F L + LK
Sbjct: 312 SDHSPCIIILENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKA 371
Query: 180 LKDNLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKA 359
K K LN + F +I + K A + L+ Q P D R + + +K + F +
Sbjct: 372 AKKCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRVEHVARKKWNFFAAAL 431
Query: 360 EKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIE 539
E FY+QK++ +L D TRFFH ++ N KN I + DD + QV +
Sbjct: 432 ES-FYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVA 490
Query: 540 FYKQLLGTKQNTQPPDP--EIIGNGPL-LDETQGSDLIKPITNSEILDALRDIGDDRSPG 710
+Y LLG+ + PD I P ++T S L ++ EI A+ + +++PG
Sbjct: 491 YYTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPG 550
Query: 711 SDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRPI 890
D +++ FF +SW V + AVKEFF +G LLK++N T + LIPK ++ FRP+
Sbjct: 551 PDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPV 610
Query: 891 ACCKVIYKLIS 923
+CC V+YK+I+
Sbjct: 611 SCCTVVYKIIT 621
>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
thaliana]
Length = 1253
Score = 159 bits (403), Expect = 1e-36
Identities = 101/324 (31%), Positives = 170/324 (52%), Gaps = 10/324 (3%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQS-HYRGTAQFILCQQLKG 179
SDH+ C V + K P+RF+N L ++ DF +V + W S + G++ F + ++LK
Sbjct: 178 SDHASCGVIINPLMHREKRPFRFYNFLLQNPDFISLVGELWYSINVVGSSMFKMSKKLKA 237
Query: 180 LKDNLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKA 359
LK+ ++ + ++FS++ R K A + Q P + + +E ++ L L KA
Sbjct: 238 LKNPIRTFSMENFSNLEKRVKEAHNLVLYRQNKTLSDP-TIPNAALEMEAQRKWLILVKA 296
Query: 360 EKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIE 539
E+ F+ Q+++ ++ + D T +FH + N I I+ D+G +Q + IE
Sbjct: 297 EESFFCQRSRVTWMGEGDSNTSYFHRMADSRKAVNTIHIIIDDNGVKIDTQLGIKEHCIE 356
Query: 540 FYKQLLGTKQNTQPPDPEIIGNGPLL-----DETQGSDLIKPITNSEILDALRDIGDDRS 704
++ LLG + P I + LL Q +L + +I A +++
Sbjct: 357 YFSNLLGGEVG---PPMLIQEDFDLLLPFRCSHDQKKELAMSFSRQDIKSAFFSFPSNKT 413
Query: 705 PGSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFR 884
G DG+ FFK++W+ +G +V DAV EFF+S LLKQWN T L LIPK ++SK+ DFR
Sbjct: 414 SGPDGFPVEFFKETWSVIGTEVTDAVSEFFTSSVLLKQWNATTLVLIPKITNASKMNDFR 473
Query: 885 PIACCK----VIYKLISKILATRM 944
PI+C +YK+I+++L R+
Sbjct: 474 PISCNDFGPITLYKVIARLLTNRL 497
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 159 bits (403), Expect = 1e-36
Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 4/318 (1%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQSHYR-GTAQFILCQQLKG 179
SDH+PC++ + + K +++F+ L+ H + + W+++ G+ F L Q LK
Sbjct: 228 SDHAPCIILIDNQPPPSKKSFKYFSFLSSHPSYLAALSTAWEANTLVGSHMFSLRQHLKV 287
Query: 180 LKDNLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKA 359
K + LN FS+I R + +L++ Q P D R + + RK +F + A
Sbjct: 288 AKLCCRTLNRLRFSNIQQRTAQSLTRLEDIQVELLTSPSDTLFRREHVA-RKQWIFFAAA 346
Query: 360 EKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIE 539
+ F++QK++ +L + D TRFFH V + N I + DDG + DQ+ I
Sbjct: 347 LESFFRQKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIA 406
Query: 540 FYKQLLGT-KQNTQPPDPEII-GNGPL-LDETQGSDLIKPITNSEILDALRDIGDDRSPG 710
+Y LLG +N P E I G P D S L + EI L + +++PG
Sbjct: 407 YYSHLLGIPSENVTPFSVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVLFSMPRNKAPG 466
Query: 711 SDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRPI 890
DG+ FF ++W V V A++EFF SG L + +N T + LIPK + ++ FRP+
Sbjct: 467 PDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRPV 526
Query: 891 ACCKVIYKLISKILATRM 944
ACC IYK+I++I++ R+
Sbjct: 527 ACCTTIYKVITRIISRRL 544
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 159 bits (402), Expect = 1e-36
Identities = 99/319 (31%), Positives = 162/319 (50%), Gaps = 5/319 (1%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQS-HYRGTAQFILCQQLKG 179
SDHS C +SL K P+RF N L + +F ++ W S G+A + + +LK
Sbjct: 126 SDHSSCELSLMSASPRSKKPFRFNNFLLKDENFLSLICLKWFSTSVTGSAMYRVSVKLKA 185
Query: 180 LKDNLKALNEKHFSHISSRAKHAKEKLKETQK--LFHDFPHDLEIRSQLLELRKNSLFLS 353
LK ++ + ++S I R K A + L Q L P + I + E ++ L+
Sbjct: 186 LKKVIRDFSRDNYSDIEKRTKEAHDALLLAQSVLLASPCPSNAAIEA---ETQRKWRILA 242
Query: 354 KAEKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEF 533
+AE F+ Q+++ N+L + D + +FH + N I + G+ Q +
Sbjct: 243 EAEASFFYQRSRVNWLREGDMNSSYFHKMASARQSLNHIHFLSDPVGDRIEGQQNLENHC 302
Query: 534 IEFYKQLLGTKQNTQPPDPEIIGN--GPLLDETQGSDLIKPITNSEILDALRDIGDDRSP 707
+E+++ LG++Q + I N Q L P ++ +I +A + +++
Sbjct: 303 VEYFQSNLGSEQGLPLFEQADISNLLSYRCSPAQQVSLDTPFSSEQIKNAFFSLPRNKAS 362
Query: 708 GSDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRP 887
G DG+S FF W +G +V +A+ EFF+SG LLKQWN T L LIPK ++S + DFRP
Sbjct: 363 GPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLVLIPKITNASSMSDFRP 422
Query: 888 IACCKVIYKLISKILATRM 944
I+C +YK+ISK+L R+
Sbjct: 423 ISCLNTVYKVISKLLTDRL 441
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 159 bits (402), Expect = 1e-36
Identities = 101/318 (31%), Positives = 162/318 (50%), Gaps = 4/318 (1%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQSHYR-GTAQFILCQQLKG 179
SDH+PC++ + + K +++F+ L+ H + + W+ + G+ F L Q LK
Sbjct: 271 SDHAPCIILIDNQPPPSKKSFKYFSFLSSHPSYLAALSTAWEENTLVGSHMFSLRQHLKV 330
Query: 180 LKDNLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKA 359
K + LN FS+I R + +L++ Q P D R + + RK +F + A
Sbjct: 331 AKLCCRTLNRLRFSNIQQRTAQSLTRLEDIQVELLTSPSDTLFRREHVA-RKQWIFFAAA 389
Query: 360 EKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIE 539
+ F++QK++ +L + D TRFFH V + N I + DDG + DQ+ I
Sbjct: 390 LESFFRQKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIA 449
Query: 540 FYKQLLGT-KQNTQPPDPEII-GNGPL-LDETQGSDLIKPITNSEILDALRDIGDDRSPG 710
+Y LLG +N P E I G P D S L + EI L + +++PG
Sbjct: 450 YYSHLLGIPSENVTPFSVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVLFSMPRNKAPG 509
Query: 711 SDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRPI 890
DG+ FF ++W V V A++EFF SG L + +N T + LIPK + ++ FRP+
Sbjct: 510 PDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRPV 569
Query: 891 ACCKVIYKLISKILATRM 944
ACC IYK+I++I++ R+
Sbjct: 570 ACCTTIYKVITRIISRRL 587
>gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thaliana]
Length = 668
Score = 154 bits (389), Expect = 5e-35
Identities = 98/306 (32%), Positives = 154/306 (50%), Gaps = 4/306 (1%)
Frame = +3
Query: 3 SDHSPCVVSLFDTHSSGKTPWRFFNMLAEHHDFHQVVQDGWQSHYR-GTAQFILCQQLKG 179
SDHSPC++ L + K +R+F+ L+ H F + W+ G+ F L + LK
Sbjct: 248 SDHSPCIIILENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKA 307
Query: 180 LKDNLKALNEKHFSHISSRAKHAKEKLKETQKLFHDFPHDLEIRSQLLELRKNSLFLSKA 359
K K LN + F +I + K A + L+ Q P D R + + +K + F +
Sbjct: 308 AKKCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRVEHVARKKWNFFAAAL 367
Query: 360 EKLFYQQKAKCNYLIQSDKCTRFFHSIVKRNAKKNFIASIVRDDGNPTVSQDQVALEFIE 539
E FY+QK++ +L D TRFFH ++ N KN I + DD + QV +
Sbjct: 368 ES-FYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVA 426
Query: 540 FYKQLLGTKQNTQPPDP--EIIGNGPL-LDETQGSDLIKPITNSEILDALRDIGDDRSPG 710
+Y LLG+ + PD I P ++T S L ++ EI A+ + +++PG
Sbjct: 427 YYTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPG 486
Query: 711 SDGYSSAFFKKSWTTVGEQVCDAVKEFFSSGCLLKQWNHTILALIPKSDHSSKVGDFRPI 890
D +++ FF +SW V + AVKEFF +G LLK++N T + LIPK ++ FRP+
Sbjct: 487 PDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPV 546
Query: 891 ACCKVI 908
+CC V+
Sbjct: 547 SCCTVV 552