BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00017476
         (1267 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004244963.1| PREDICTED: pentatricopeptide repeat-containi...   701   0.0  
ref|XP_006346695.1| PREDICTED: pentatricopeptide repeat-containi...   699   0.0  
ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containi...   681   0.0  
gb|EMJ26384.1| hypothetical protein PRUPE_ppa002191mg [Prunus pe...   670   0.0  
gb|EOY15236.1| Pentatricopeptide repeat (PPR-like) superfamily p...   657   0.0  
gb|EOY15235.1| Pentatricopeptide repeat (PPR-like) superfamily p...   657   0.0  
gb|EXB56341.1| hypothetical protein L484_024883 [Morus notabilis]     657   0.0  
ref|XP_002510663.1| pentatricopeptide repeat-containing protein,...   654   0.0  
ref|XP_004292910.1| PREDICTED: pentatricopeptide repeat-containi...   653   0.0  
ref|XP_002306972.1| hypothetical protein POPTR_0005s27160g [Popu...   652   0.0  
ref|XP_006435342.1| hypothetical protein CICLE_v10000451mg [Citr...   651   0.0  
ref|XP_006473770.1| PREDICTED: pentatricopeptide repeat-containi...   650   0.0  
ref|XP_006279580.1| hypothetical protein CARUB_v10025981mg [Caps...   650   0.0  
ref|XP_004500883.1| PREDICTED: pentatricopeptide repeat-containi...   647   0.0  
ref|XP_002865541.1| pentatricopeptide repeat-containing protein ...   647   0.0  
dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]        646   0.0  
ref|NP_199046.1| pentatricopeptide repeat-containing protein [Ar...   646   0.0  
ref|XP_006405260.1| hypothetical protein EUTSA_v10027665mg [Eutr...   644   0.0  
ref|XP_002301924.1| hypothetical protein POPTR_0002s01200g [Popu...   641   0.0  
ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containi...   633   e-179

>ref|XP_004244963.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
          Length = 699

 Score =  701 bits (1809), Expect = 0.0
 Identities = 339/393 (86%), Positives = 370/393 (94%)
 Frame = +3

Query: 3    NLGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEH 182
            N GR DEAEA+FEE+KEGGLKPRTRA+N+LLKGYVK G+LKDAEYIVSEME SGV PDEH
Sbjct: 307  NSGRTDEAEAIFEELKEGGLKPRTRAFNSLLKGYVKTGSLKDAEYIVSEMERSGVAPDEH 366

Query: 183  TYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEM 362
            TYSLLIDAYGNAGRWESARIVLKEMEAN V+PNS+VFSRILASYRDRGEWQRSFQVLKEM
Sbjct: 367  TYSLLIDAYGNAGRWESARIVLKEMEANNVQPNSFVFSRILASYRDRGEWQRSFQVLKEM 426

Query: 363  KNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHH 542
            KN GV+PDRQFYN+MIDTFGKYNCLDH M+ FERMK+E IEPDTVTWNTLIDCH K GHH
Sbjct: 427  KNSGVNPDRQFYNIMIDTFGKYNCLDHAMSTFERMKLEEIEPDTVTWNTLIDCHSKHGHH 486

Query: 543  NKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTL 722
            NKAE LFE MQE GC PCTTTYNIMINSFG  E+W++VK LL +MQSQGLLPNVVTYTTL
Sbjct: 487  NKAEELFEVMQESGCSPCTTTYNIMINSFGELEKWEEVKGLLSKMQSQGLLPNVVTYTTL 546

Query: 723  VDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGL 902
            ++IYGQSGRF+DAIECLE MKSAGLKPSSTMYNALINAYAQ+GLSEQAVNAFR+M+GDGL
Sbjct: 547  INIYGQSGRFNDAIECLEVMKSAGLKPSSTMYNALINAYAQRGLSEQAVNAFRIMKGDGL 606

Query: 903  KPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPA 1082
            KPSLLALNSLINAFGEDRRD+EAFAVL+YM++ND+KPDVVTYTTLMK LIRVEK+E+VPA
Sbjct: 607  KPSLLALNSLINAFGEDRRDAEAFAVLKYMKENDMKPDVVTYTTLMKTLIRVEKFERVPA 666

Query: 1083 VFEEMLLSGCAPDRKARAMLRSALKYMKSTLRL 1181
            V+EEMLLSGC PDRKARAMLRSAL+YMKSTL+L
Sbjct: 667  VYEEMLLSGCIPDRKARAMLRSALRYMKSTLKL 699



 Score =  142 bits (358), Expect = 3e-31
 Identities = 85/374 (22%), Positives = 179/374 (47%), Gaps = 2/374 (0%)
 Frame = +3

Query: 6    LGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHT 185
            LGR ++    F   +   L P T  YNAL+    + G L+ A  ++  M   G   D   
Sbjct: 168  LGRSEKLYEAFLLSQRQTLTPLT--YNALIGACARNGDLEKALNLMCRMRRDGYQSDYVN 225

Query: 186  YSLLIDAYGNAGRWESARI--VLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKE 359
            YSL+I +   +   +   +     E+EA+ ++ +  + + ++  +   G+   +   +  
Sbjct: 226  YSLIIQSLIRSNSIDLTMLHKFCYEIEADMIELDGQLLNDMIVGFAKAGDVDTALGFMSV 285

Query: 360  MKNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGH 539
            ++  G+ P       +I   G     D     FE +K  G++P T  +N+L+  + K G 
Sbjct: 286  VQGNGLSPKIATVVNLISELGNSGRTDEAEAIFEELKEGGLKPRTRAFNSLLKGYVKTGS 345

Query: 540  HNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTT 719
               AE +  EM+  G  P   TY+++I+++G   RW+  + +L +M++  + PN   ++ 
Sbjct: 346  LKDAEYIVSEMERSGVAPDEHTYSLLIDAYGNAGRWESARIVLKEMEANNVQPNSFVFSR 405

Query: 720  LVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDG 899
            ++  Y   G +  + + L+ MK++G+ P    YN +I+ + +    + A++ F  M+ + 
Sbjct: 406  ILASYRDRGEWQRSFQVLKEMKNSGVNPDRQFYNIMIDTFGKYNCLDHAMSTFERMKLEE 465

Query: 900  LKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVP 1079
            ++P  +  N+LI+   +    ++A  + + M+++   P   TY  ++ +   +EK+E+V 
Sbjct: 466  IEPDTVTWNTLIDCHSKHGHHNKAEELFEVMQESGCSPCTTTYNIMINSFGELEKWEEVK 525

Query: 1080 AVFEEMLLSGCAPD 1121
             +  +M   G  P+
Sbjct: 526  GLLSKMQSQGLLPN 539



 Score = 68.2 bits (165), Expect = 7e-09
 Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 3/186 (1%)
 Frame = +3

Query: 603  TYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTLVDIYGQSGRFHDAIE---CL 773
            TYN +I +  R    +    L+ +M+  G   + V Y+ ++    +S      +    C 
Sbjct: 190  TYNALIGACARNGDLEKALNLMCRMRRDGYQSDYVNYSLIIQSLIRSNSIDLTMLHKFCY 249

Query: 774  EAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNSLINAFGED 953
            E +++  ++    + N +I  +A+ G  + A+    V++G+GL P +  + +LI+  G  
Sbjct: 250  E-IEADMIELDGQLLNDMIVGFAKAGDVDTALGFMSVVQGNGLSPKIATVVNLISELGNS 308

Query: 954  RRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAPDRKAR 1133
             R  EA A+ + +++  LKP    + +L+K  ++    +    +  EM  SG APD    
Sbjct: 309  GRTDEAEAIFEELKEGGLKPRTRAFNSLLKGYVKTGSLKDAEYIVSEMERSGVAPDEHTY 368

Query: 1134 AMLRSA 1151
            ++L  A
Sbjct: 369  SLLIDA 374


>ref|XP_006346695.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum tuberosum]
          Length = 697

 Score =  699 bits (1804), Expect = 0.0
 Identities = 338/393 (86%), Positives = 370/393 (94%)
 Frame = +3

Query: 3    NLGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEH 182
            N GR +EAEA+FEE+KEGGLKPRTRA+NALLKGYVK G+LKDAEYIVSEMESSGV PDEH
Sbjct: 305  NSGRTEEAEAIFEELKEGGLKPRTRAFNALLKGYVKTGSLKDAEYIVSEMESSGVAPDEH 364

Query: 183  TYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEM 362
            TYSLLIDAYGNAGRWESARIVLKEMEAN V+PNS+VFSRILASYRDRGEWQRSFQVLKEM
Sbjct: 365  TYSLLIDAYGNAGRWESARIVLKEMEANNVQPNSFVFSRILASYRDRGEWQRSFQVLKEM 424

Query: 363  KNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHH 542
            KN GV+PDRQFYN+MIDTFGKYNCLDH M+ FERMK+E IEPDTVTWNTLIDCH K GHH
Sbjct: 425  KNSGVNPDRQFYNIMIDTFGKYNCLDHAMSTFERMKLEEIEPDTVTWNTLIDCHSKHGHH 484

Query: 543  NKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTL 722
            NKAE LFE MQE GC PCTTTYNIMINSFG  E+W++VK LL +MQSQGLLPNVVTYTTL
Sbjct: 485  NKAEELFETMQESGCSPCTTTYNIMINSFGELEKWEEVKCLLSKMQSQGLLPNVVTYTTL 544

Query: 723  VDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGL 902
            ++IYGQSGRF+DAIECLE MKSAGLKPSSTMYNALINAYAQ+GLSEQAVNAFR+M+GDGL
Sbjct: 545  INIYGQSGRFNDAIECLEVMKSAGLKPSSTMYNALINAYAQRGLSEQAVNAFRIMKGDGL 604

Query: 903  KPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPA 1082
            KPSLLALNSLINAFGEDRRD+EAFAVL+Y+++ND+KPDVVTYTTLMK LIRVEK+E+VPA
Sbjct: 605  KPSLLALNSLINAFGEDRRDAEAFAVLKYLKENDMKPDVVTYTTLMKTLIRVEKFERVPA 664

Query: 1083 VFEEMLLSGCAPDRKARAMLRSALKYMKSTLRL 1181
            V+EEMLL GC PDRKARAMLRSAL+YMKSTL+L
Sbjct: 665  VYEEMLLCGCIPDRKARAMLRSALRYMKSTLKL 697



 Score =  142 bits (359), Expect = 2e-31
 Identities = 85/374 (22%), Positives = 179/374 (47%), Gaps = 2/374 (0%)
 Frame = +3

Query: 6    LGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHT 185
            LGR ++    F   +   L P T  YNAL+    + G L+ A  ++  M   G   D   
Sbjct: 166  LGRSEKLYEAFLLSQRQTLTPLT--YNALIGACARNGDLEKALNLMCRMRRDGYQSDYVN 223

Query: 186  YSLLIDAYGNAGRWESARI--VLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKE 359
            YSL+I +   +   +   +     E+EA+ ++ +  + + ++  +   G+  R+   +  
Sbjct: 224  YSLIIQSLIRSNSIDLTMLHKFCYEIEADMIELDGQLLNDMIVGFAKAGDVDRALGFMSI 283

Query: 360  MKNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGH 539
            ++  G+ P       +I   G     +     FE +K  G++P T  +N L+  + K G 
Sbjct: 284  VQGNGLSPKTATVVNLISELGNSGRTEEAEAIFEELKEGGLKPRTRAFNALLKGYVKTGS 343

Query: 540  HNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTT 719
               AE +  EM+  G  P   TY+++I+++G   RW+  + +L +M++  + PN   ++ 
Sbjct: 344  LKDAEYIVSEMESSGVAPDEHTYSLLIDAYGNAGRWESARIVLKEMEANNVQPNSFVFSR 403

Query: 720  LVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDG 899
            ++  Y   G +  + + L+ MK++G+ P    YN +I+ + +    + A++ F  M+ + 
Sbjct: 404  ILASYRDRGEWQRSFQVLKEMKNSGVNPDRQFYNIMIDTFGKYNCLDHAMSTFERMKLEE 463

Query: 900  LKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVP 1079
            ++P  +  N+LI+   +    ++A  + + M+++   P   TY  ++ +   +EK+E+V 
Sbjct: 464  IEPDTVTWNTLIDCHSKHGHHNKAEELFETMQESGCSPCTTTYNIMINSFGELEKWEEVK 523

Query: 1080 AVFEEMLLSGCAPD 1121
             +  +M   G  P+
Sbjct: 524  CLLSKMQSQGLLPN 537



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 3/186 (1%)
 Frame = +3

Query: 603  TYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTLVDIYGQSGRFHDAIE---CL 773
            TYN +I +  R    +    L+ +M+  G   + V Y+ ++    +S      +    C 
Sbjct: 188  TYNALIGACARNGDLEKALNLMCRMRRDGYQSDYVNYSLIIQSLIRSNSIDLTMLHKFCY 247

Query: 774  EAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNSLINAFGED 953
            E +++  ++    + N +I  +A+ G  ++A+    +++G+GL P    + +LI+  G  
Sbjct: 248  E-IEADMIELDGQLLNDMIVGFAKAGDVDRALGFMSIVQGNGLSPKTATVVNLISELGNS 306

Query: 954  RRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAPDRKAR 1133
             R  EA A+ + +++  LKP    +  L+K  ++    +    +  EM  SG APD    
Sbjct: 307  GRTEEAEAIFEELKEGGLKPRTRAFNALLKGYVKTGSLKDAEYIVSEMESSGVAPDEHTY 366

Query: 1134 AMLRSA 1151
            ++L  A
Sbjct: 367  SLLIDA 372


>ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Vitis vinifera]
            gi|297745544|emb|CBI40709.3| unnamed protein product
            [Vitis vinifera]
          Length = 695

 Score =  681 bits (1757), Expect = 0.0
 Identities = 328/392 (83%), Positives = 359/392 (91%)
 Frame = +3

Query: 3    NLGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEH 182
            N GR +EAEA+FEE+KEGGL PRTRAYNALLKGYVK G+LKDAE IVSEME SG  PDEH
Sbjct: 303  NAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEH 362

Query: 183  TYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEM 362
            TYSLLIDAY NAGRWESARIVLKEMEA+GV+PNSYVFSRILASYRDRG+WQ+SFQVL+EM
Sbjct: 363  TYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREM 422

Query: 363  KNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHH 542
            +N GV PDR FYNVMIDTFGK NCLDH +  F+RM++EG++PD VTWNTLIDCHCK GHH
Sbjct: 423  RNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHH 482

Query: 543  NKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTL 722
            NKAE LFE MQE GC PCTTTYNIMINSFG QERW+DVK LLG+MQSQGLL NVVTYTTL
Sbjct: 483  NKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTL 542

Query: 723  VDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGL 902
            VDIYGQSGRF DAIECLE MKS GLKPSSTMYNALINAYAQ+GLSEQA+NAFRVMR DGL
Sbjct: 543  VDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGL 602

Query: 903  KPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPA 1082
            KPS+L LNSLINAFGEDRRD+EAF+VLQYM++NDLKPDVVTYTTLMKALIRVEK++KVPA
Sbjct: 603  KPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPA 662

Query: 1083 VFEEMLLSGCAPDRKARAMLRSALKYMKSTLR 1178
            V+EEM LSGC PDRKARAMLRSAL+YM+ TL+
Sbjct: 663  VYEEMTLSGCTPDRKARAMLRSALRYMERTLK 694



 Score =  107 bits (266), Expect = 1e-20
 Identities = 72/317 (22%), Positives = 144/317 (45%), Gaps = 2/317 (0%)
 Frame = +3

Query: 177  EHTYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLK 356
            E  YS+LI A G + +   A ++ +      +  N+     ++ +     + +++  ++ 
Sbjct: 154  ELLYSILIHALGRSEKLYEAFLLSQRQTLTPLTYNA-----LIGACARNDDLEKALNLMS 208

Query: 357  EMKNCGVHPDRQFYNVMIDTFGKYNCLDHMMTA--FERMKVEGIEPDTVTWNTLIDCHCK 530
             M+  G   D   Y+ +I +  + N  D  M    +  ++ + IE D    N +I    K
Sbjct: 209  RMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAK 268

Query: 531  QGHHNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVT 710
             G  N+A +    +Q +G  P T T   +I + G   R ++ + +  +++  GL+P    
Sbjct: 269  SGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRA 328

Query: 711  YTTLVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMR 890
            Y  L+  Y ++G   DA   +  M+ +G  P    Y+ LI+AYA  G  E A    + M 
Sbjct: 329  YNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEME 388

Query: 891  GDGLKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYE 1070
              G++P+    + ++ ++ +  +  ++F VL+ MR++ + PD   Y  ++    +    +
Sbjct: 389  ASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLD 448

Query: 1071 KVPAVFEEMLLSGCAPD 1121
               A F+ M + G  PD
Sbjct: 449  HALATFDRMRMEGVQPD 465



 Score = 89.4 bits (220), Expect = 3e-15
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 2/245 (0%)
 Frame = +3

Query: 396  YNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNKA--ETLFEE 569
            YN +I    + + L+  +    RM+ +G   D V ++ +I    +    + +  + ++ E
Sbjct: 187  YNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAE 246

Query: 570  MQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTLVDIYGQSGR 749
            ++ D         N +I  F +    +     L  +Q  GL P   T   ++   G +GR
Sbjct: 247  IESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGR 306

Query: 750  FHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNS 929
              +A    E +K  GL P +  YNAL+  Y + G  + A +    M   G  P     + 
Sbjct: 307  TEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSL 366

Query: 930  LINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSG 1109
            LI+A+    R   A  VL+ M  + ++P+   ++ ++ +     K++K   V  EM  SG
Sbjct: 367  LIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSG 426

Query: 1110 CAPDR 1124
             +PDR
Sbjct: 427  VSPDR 431



 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 5/224 (2%)
 Frame = +3

Query: 501  WNTLIDCHCKQGHH-NKAETLFEEMQEDG-CLPCTTTYNIMINSFGRQERWDDVKELLGQ 674
            W++L+   C        A +L   ++    C      Y+I+I++ GR E+   + E    
Sbjct: 120  WHSLLKSLCSDSSSIGTAYSLVTWLERHNLCFSYELLYSILIHALGRSEK---LYEAFLL 176

Query: 675  MQSQGLLPNVVTYTTLVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGL 854
             Q Q L P  +TY  L+    ++     A+  +  M+  G       Y+ +I +  +   
Sbjct: 177  SQRQTLTP--LTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNK 234

Query: 855  SEQAV--NAFRVMRGDGLKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTY 1028
            S+ ++    +  +  D ++     LN +I  F +    + A + L  ++ N L P   T 
Sbjct: 235  SDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATL 294

Query: 1029 TTLMKALIRVEKYEKVPAVFEEMLLSGCAPDRKA-RAMLRSALK 1157
              ++ AL    + E+  A+FEE+   G  P  +A  A+L+  +K
Sbjct: 295  VAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVK 338


>gb|EMJ26384.1| hypothetical protein PRUPE_ppa002191mg [Prunus persica]
          Length = 703

 Score =  670 bits (1728), Expect = 0.0
 Identities = 325/392 (82%), Positives = 356/392 (90%)
 Frame = +3

Query: 3    NLGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEH 182
            N GRV EAEA+FEE+KEGGL+PRTRAYNALLKGYVK   LKDAE IVS+ME SG+ PDEH
Sbjct: 312  NCGRVVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKAAQLKDAESIVSQMEKSGISPDEH 371

Query: 183  TYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEM 362
            TYSLLIDAY NAGRWESARIVLKEMEA+ V+PNSYVFSRILASYRDRGEWQ+SFQVL+EM
Sbjct: 372  TYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKSFQVLREM 431

Query: 363  KNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHH 542
            K+ GV PDR FYNVMIDTFGK NCLDH+M  FERM  EGI+PDTVTWNTLIDCHCK GHH
Sbjct: 432  KSSGVRPDRHFYNVMIDTFGKSNCLDHVMATFERMLSEGIQPDTVTWNTLIDCHCKSGHH 491

Query: 543  NKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTL 722
             +AE LFEEM + GC PC TTYNIMINSFG Q+RW +VK LLG+MQ+QGLLPN+VTYTTL
Sbjct: 492  KRAEELFEEMHQSGCAPCATTYNIMINSFGEQQRWVEVKGLLGKMQAQGLLPNIVTYTTL 551

Query: 723  VDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGL 902
            VDIYG+SGRF+DAIECLE MKSAGLKPS TMYNALINAYAQ+GLSEQA+NAFRVMR DGL
Sbjct: 552  VDIYGKSGRFNDAIECLEVMKSAGLKPSPTMYNALINAYAQRGLSEQALNAFRVMRADGL 611

Query: 903  KPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPA 1082
            KPSLLALNSLINAFGEDRRD+EAF+VLQYM++NDLKPDVVTYTTLMK LIRV+K+ KVPA
Sbjct: 612  KPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKTLIRVDKFYKVPA 671

Query: 1083 VFEEMLLSGCAPDRKARAMLRSALKYMKSTLR 1178
            V+EEM+LS C PDRKARAMLRSALKYMK TLR
Sbjct: 672  VYEEMILSRCTPDRKARAMLRSALKYMKQTLR 703



 Score =  150 bits (379), Expect = 1e-33
 Identities = 98/371 (26%), Positives = 174/371 (46%)
 Frame = +3

Query: 6    LGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHT 185
            LGR ++    F   +   L P T  YNAL+    + G L+ A +++S M   G   D   
Sbjct: 173  LGRSEKLYEAFLLSQRQSLTPLT--YNALIGACARNGDLEKALHLMSRMRQDGYRSDFVN 230

Query: 186  YSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEMK 365
            YSL+I +   + + +S  I+LK                                + +E++
Sbjct: 231  YSLIIQSLSRSNKIDSP-IMLK--------------------------------LYREIE 257

Query: 366  NCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHN 545
            +  +  D Q YN +I  F K       M     ++  G+ P T T   LI      G   
Sbjct: 258  SESIEIDGQLYNDIIAGFAKAGEPTQAMHLLAMVQATGLSPKTATLVALISALGNCGRVV 317

Query: 546  KAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTLV 725
            +AE +FEEM+E G  P T  YN ++  + +  +  D + ++ QM+  G+ P+  TY+ L+
Sbjct: 318  EAEAIFEEMKEGGLQPRTRAYNALLKGYVKAAQLKDAESIVSQMEKSGISPDEHTYSLLI 377

Query: 726  DIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLK 905
            D Y  +GR+  A   L+ M+++ ++P+S +++ ++ +Y  +G  +++    R M+  G++
Sbjct: 378  DAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKSFQVLREMKSSGVR 437

Query: 906  PSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAV 1085
            P     N +I+ FG+        A  + M    ++PD VT+ TL+    +   +++   +
Sbjct: 438  PDRHFYNVMIDTFGKSNCLDHVMATFERMLSEGIQPDTVTWNTLIDCHCKSGHHKRAEEL 497

Query: 1086 FEEMLLSGCAP 1118
            FEEM  SGCAP
Sbjct: 498  FEEMHQSGCAP 508



 Score =  113 bits (283), Expect = 1e-22
 Identities = 76/317 (23%), Positives = 148/317 (46%), Gaps = 2/317 (0%)
 Frame = +3

Query: 177  EHTYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLK 356
            E  YS+LI A G + +   A ++    +   + P +Y  + ++ +    G+ +++  ++ 
Sbjct: 163  ELLYSILIHALGRSEKLYEAFLL---SQRQSLTPLTY--NALIGACARNGDLEKALHLMS 217

Query: 357  EMKNCGVHPDRQFYNVMIDTFGKYNCLDH--MMTAFERMKVEGIEPDTVTWNTLIDCHCK 530
             M+  G   D   Y+++I +  + N +D   M+  +  ++ E IE D   +N +I    K
Sbjct: 218  RMRQDGYRSDFVNYSLIIQSLSRSNKIDSPIMLKLYREIESESIEIDGQLYNDIIAGFAK 277

Query: 531  QGHHNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVT 710
             G   +A  L   +Q  G  P T T   +I++ G   R  + + +  +M+  GL P    
Sbjct: 278  AGEPTQAMHLLAMVQATGLSPKTATLVALISALGNCGRVVEAEAIFEEMKEGGLQPRTRA 337

Query: 711  YTTLVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMR 890
            Y  L+  Y ++ +  DA   +  M+ +G+ P    Y+ LI+AYA  G  E A    + M 
Sbjct: 338  YNALLKGYVKAAQLKDAESIVSQMEKSGISPDEHTYSLLIDAYANAGRWESARIVLKEME 397

Query: 891  GDGLKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYE 1070
               ++P+    + ++ ++ +     ++F VL+ M+ + ++PD   Y  ++    +    +
Sbjct: 398  ASNVQPNSYVFSRILASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLD 457

Query: 1071 KVPAVFEEMLLSGCAPD 1121
             V A FE ML  G  PD
Sbjct: 458  HVMATFERMLSEGIQPD 474


>gb|EOY15236.1| Pentatricopeptide repeat (PPR-like) superfamily protein isoform 2,
            partial [Theobroma cacao]
          Length = 698

 Score =  657 bits (1696), Expect = 0.0
 Identities = 318/390 (81%), Positives = 354/390 (90%)
 Frame = +3

Query: 9    GRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHTY 188
            GR+ EAEAVFEE+K  GLKPRTRAYNALLKGYVK G+LKDAE +VSEME SGV PDEHTY
Sbjct: 308  GRIAEAEAVFEEMKGTGLKPRTRAYNALLKGYVKAGSLKDAELVVSEMERSGVSPDEHTY 367

Query: 189  SLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEMKN 368
            SLLIDAY NAGRWESARIVLKEMEAN V+PNS+V+SRILASYR++GEWQRSFQVL+EMK+
Sbjct: 368  SLLIDAYANAGRWESARIVLKEMEANNVQPNSFVYSRILASYRNKGEWQRSFQVLREMKS 427

Query: 369  CGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNK 548
             G+ PDR FYNVMIDTFGKYNCLDH M  F+RM  EGI+PDTVTWNTLIDCHCK G H +
Sbjct: 428  NGIQPDRHFYNVMIDTFGKYNCLDHAMDTFDRMLSEGIKPDTVTWNTLIDCHCKAGRHGR 487

Query: 549  AETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTLVD 728
            AE LFEEM+E G  PCTTTYNIMINSFG QERWD+VK LLG+MQSQGLLPN+VTYTTLVD
Sbjct: 488  AEELFEEMKESGYSPCTTTYNIMINSFGGQERWDNVKSLLGKMQSQGLLPNIVTYTTLVD 547

Query: 729  IYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLKP 908
            IYG+SGRF DA+ECLE MKSAGLKPS TMYNALINAYAQ+GLSEQA+NA R+MR DGLKP
Sbjct: 548  IYGKSGRFSDAMECLELMKSAGLKPSLTMYNALINAYAQRGLSEQAINALRIMRADGLKP 607

Query: 909  SLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVF 1088
            +LLALNSLINAFGEDRRD EAFAVLQYM++ND+KPDVVTYTTLMK+LIRV+K+ KVPAV+
Sbjct: 608  NLLALNSLINAFGEDRRDVEAFAVLQYMKENDVKPDVVTYTTLMKSLIRVDKFHKVPAVY 667

Query: 1089 EEMLLSGCAPDRKARAMLRSALKYMKSTLR 1178
            EEM+LSGC PDRKARAMLRSAL+YMK  ++
Sbjct: 668  EEMILSGCTPDRKARAMLRSALRYMKQKVK 697



 Score =  151 bits (382), Expect = 5e-34
 Identities = 78/278 (28%), Positives = 148/278 (53%)
 Frame = +3

Query: 3    NLGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEH 182
            N GR + A  V +E++   ++P +  Y+ +L  Y   G  + +  ++ EM+S+G+ PD H
Sbjct: 376  NAGRWESARIVLKEMEANNVQPNSFVYSRILASYRNKGEWQRSFQVLREMKSNGIQPDRH 435

Query: 183  TYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEM 362
             Y+++ID +G     + A      M + G+KP++  ++ ++  +   G   R+ ++ +EM
Sbjct: 436  FYNVMIDTFGKYNCLDHAMDTFDRMLSEGIKPDTVTWNTLIDCHCKAGRHGRAEELFEEM 495

Query: 363  KNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHH 542
            K  G  P    YN+MI++FG     D++ +   +M+ +G+ P+ VT+ TL+D + K G  
Sbjct: 496  KESGYSPCTTTYNIMINSFGGQERWDNVKSLLGKMQSQGLLPNIVTYTTLVDIYGKSGRF 555

Query: 543  NKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTL 722
            + A    E M+  G  P  T YN +IN++ ++   +     L  M++ GL PN++   +L
Sbjct: 556  SDAMECLELMKSAGLKPSLTMYNALINAYAQRGLSEQAINALRIMRADGLKPNLLALNSL 615

Query: 723  VDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINA 836
            ++ +G+  R  +A   L+ MK   +KP    Y  L+ +
Sbjct: 616  INAFGEDRRDVEAFAVLQYMKENDVKPDVVTYTTLMKS 653



 Score =  145 bits (365), Expect = 5e-32
 Identities = 88/374 (23%), Positives = 178/374 (47%), Gaps = 2/374 (0%)
 Frame = +3

Query: 6    LGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHT 185
            LGR ++    F   +   L P T  YNAL+    +   L+ A  ++S M   G   D   
Sbjct: 167  LGRSEKLYEAFLLSQRQTLTPLT--YNALINACARNNDLEKALNLMSRMRQDGYQSDFVN 224

Query: 186  YSLLIDAYGNAGRWESARI--VLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKE 359
            YSL+I +   + + +S+ +  +  E+E + ++ +  + + I+  +    +   + + L  
Sbjct: 225  YSLIIQSLTRSNKIDSSLLQKLYGEIECDKIEVDGQLLNDIIVGFAKANDPSHALKFLAM 284

Query: 360  MKNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGH 539
             +  G++P       +I + G    +      FE MK  G++P T  +N L+  + K G 
Sbjct: 285  AQAIGLNPKTATLVAVIYSLGCCGRIAEAEAVFEEMKGTGLKPRTRAYNALLKGYVKAGS 344

Query: 540  HNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTT 719
               AE +  EM+  G  P   TY+++I+++    RW+  + +L +M++  + PN   Y+ 
Sbjct: 345  LKDAELVVSEMERSGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEANNVQPNSFVYSR 404

Query: 720  LVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDG 899
            ++  Y   G +  + + L  MKS G++P    YN +I+ + +    + A++ F  M  +G
Sbjct: 405  ILASYRNKGEWQRSFQVLREMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMDTFDRMLSEG 464

Query: 900  LKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVP 1079
            +KP  +  N+LI+   +  R   A  + + M+++   P   TY  ++ +    E+++ V 
Sbjct: 465  IKPDTVTWNTLIDCHCKAGRHGRAEELFEEMKESGYSPCTTTYNIMINSFGGQERWDNVK 524

Query: 1080 AVFEEMLLSGCAPD 1121
            ++  +M   G  P+
Sbjct: 525  SLLGKMQSQGLLPN 538



 Score = 82.8 bits (203), Expect = 3e-13
 Identities = 69/280 (24%), Positives = 116/280 (41%), Gaps = 37/280 (13%)
 Frame = +3

Query: 396  YNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNKAETLFEEMQ 575
            Y+++I   G+    + +  AF   + + + P  +T+N LI+   +     KA  L   M+
Sbjct: 160  YSILIHALGRS---EKLYEAFLLSQRQTLTP--LTYNALINACARNNDLEKALNLMSRMR 214

Query: 576  EDGCLPCTTTYNIMINSFGRQERWD-------------DVKELLGQM------------- 677
            +DG       Y+++I S  R  + D             D  E+ GQ+             
Sbjct: 215  QDGYQSDFVNYSLIIQSLTRSNKIDSSLLQKLYGEIECDKIEVDGQLLNDIIVGFAKAND 274

Query: 678  -----------QSQGLLPNVVTYTTLVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNA 824
                       Q+ GL P   T   ++   G  GR  +A    E MK  GLKP +  YNA
Sbjct: 275  PSHALKFLAMAQAIGLNPKTATLVAVIYSLGCCGRIAEAEAVFEEMKGTGLKPRTRAYNA 334

Query: 825  LINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDND 1004
            L+  Y + G  + A      M   G+ P     + LI+A+    R   A  VL+ M  N+
Sbjct: 335  LLKGYVKAGSLKDAELVVSEMERSGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEANN 394

Query: 1005 LKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAPDR 1124
            ++P+   Y+ ++ +     ++++   V  EM  +G  PDR
Sbjct: 395  VQPNSFVYSRILASYRNKGEWQRSFQVLREMKSNGIQPDR 434


>gb|EOY15235.1| Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1
            [Theobroma cacao]
          Length = 703

 Score =  657 bits (1696), Expect = 0.0
 Identities = 318/390 (81%), Positives = 354/390 (90%)
 Frame = +3

Query: 9    GRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHTY 188
            GR+ EAEAVFEE+K  GLKPRTRAYNALLKGYVK G+LKDAE +VSEME SGV PDEHTY
Sbjct: 313  GRIAEAEAVFEEMKGTGLKPRTRAYNALLKGYVKAGSLKDAELVVSEMERSGVSPDEHTY 372

Query: 189  SLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEMKN 368
            SLLIDAY NAGRWESARIVLKEMEAN V+PNS+V+SRILASYR++GEWQRSFQVL+EMK+
Sbjct: 373  SLLIDAYANAGRWESARIVLKEMEANNVQPNSFVYSRILASYRNKGEWQRSFQVLREMKS 432

Query: 369  CGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNK 548
             G+ PDR FYNVMIDTFGKYNCLDH M  F+RM  EGI+PDTVTWNTLIDCHCK G H +
Sbjct: 433  NGIQPDRHFYNVMIDTFGKYNCLDHAMDTFDRMLSEGIKPDTVTWNTLIDCHCKAGRHGR 492

Query: 549  AETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTLVD 728
            AE LFEEM+E G  PCTTTYNIMINSFG QERWD+VK LLG+MQSQGLLPN+VTYTTLVD
Sbjct: 493  AEELFEEMKESGYSPCTTTYNIMINSFGGQERWDNVKSLLGKMQSQGLLPNIVTYTTLVD 552

Query: 729  IYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLKP 908
            IYG+SGRF DA+ECLE MKSAGLKPS TMYNALINAYAQ+GLSEQA+NA R+MR DGLKP
Sbjct: 553  IYGKSGRFSDAMECLELMKSAGLKPSLTMYNALINAYAQRGLSEQAINALRIMRADGLKP 612

Query: 909  SLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVF 1088
            +LLALNSLINAFGEDRRD EAFAVLQYM++ND+KPDVVTYTTLMK+LIRV+K+ KVPAV+
Sbjct: 613  NLLALNSLINAFGEDRRDVEAFAVLQYMKENDVKPDVVTYTTLMKSLIRVDKFHKVPAVY 672

Query: 1089 EEMLLSGCAPDRKARAMLRSALKYMKSTLR 1178
            EEM+LSGC PDRKARAMLRSAL+YMK  ++
Sbjct: 673  EEMILSGCTPDRKARAMLRSALRYMKQKVK 702



 Score =  151 bits (382), Expect = 5e-34
 Identities = 78/278 (28%), Positives = 148/278 (53%)
 Frame = +3

Query: 3    NLGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEH 182
            N GR + A  V +E++   ++P +  Y+ +L  Y   G  + +  ++ EM+S+G+ PD H
Sbjct: 381  NAGRWESARIVLKEMEANNVQPNSFVYSRILASYRNKGEWQRSFQVLREMKSNGIQPDRH 440

Query: 183  TYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEM 362
             Y+++ID +G     + A      M + G+KP++  ++ ++  +   G   R+ ++ +EM
Sbjct: 441  FYNVMIDTFGKYNCLDHAMDTFDRMLSEGIKPDTVTWNTLIDCHCKAGRHGRAEELFEEM 500

Query: 363  KNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHH 542
            K  G  P    YN+MI++FG     D++ +   +M+ +G+ P+ VT+ TL+D + K G  
Sbjct: 501  KESGYSPCTTTYNIMINSFGGQERWDNVKSLLGKMQSQGLLPNIVTYTTLVDIYGKSGRF 560

Query: 543  NKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTL 722
            + A    E M+  G  P  T YN +IN++ ++   +     L  M++ GL PN++   +L
Sbjct: 561  SDAMECLELMKSAGLKPSLTMYNALINAYAQRGLSEQAINALRIMRADGLKPNLLALNSL 620

Query: 723  VDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINA 836
            ++ +G+  R  +A   L+ MK   +KP    Y  L+ +
Sbjct: 621  INAFGEDRRDVEAFAVLQYMKENDVKPDVVTYTTLMKS 658



 Score =  145 bits (365), Expect = 5e-32
 Identities = 88/374 (23%), Positives = 178/374 (47%), Gaps = 2/374 (0%)
 Frame = +3

Query: 6    LGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHT 185
            LGR ++    F   +   L P T  YNAL+    +   L+ A  ++S M   G   D   
Sbjct: 172  LGRSEKLYEAFLLSQRQTLTPLT--YNALINACARNNDLEKALNLMSRMRQDGYQSDFVN 229

Query: 186  YSLLIDAYGNAGRWESARI--VLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKE 359
            YSL+I +   + + +S+ +  +  E+E + ++ +  + + I+  +    +   + + L  
Sbjct: 230  YSLIIQSLTRSNKIDSSLLQKLYGEIECDKIEVDGQLLNDIIVGFAKANDPSHALKFLAM 289

Query: 360  MKNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGH 539
             +  G++P       +I + G    +      FE MK  G++P T  +N L+  + K G 
Sbjct: 290  AQAIGLNPKTATLVAVIYSLGCCGRIAEAEAVFEEMKGTGLKPRTRAYNALLKGYVKAGS 349

Query: 540  HNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTT 719
               AE +  EM+  G  P   TY+++I+++    RW+  + +L +M++  + PN   Y+ 
Sbjct: 350  LKDAELVVSEMERSGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEANNVQPNSFVYSR 409

Query: 720  LVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDG 899
            ++  Y   G +  + + L  MKS G++P    YN +I+ + +    + A++ F  M  +G
Sbjct: 410  ILASYRNKGEWQRSFQVLREMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMDTFDRMLSEG 469

Query: 900  LKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVP 1079
            +KP  +  N+LI+   +  R   A  + + M+++   P   TY  ++ +    E+++ V 
Sbjct: 470  IKPDTVTWNTLIDCHCKAGRHGRAEELFEEMKESGYSPCTTTYNIMINSFGGQERWDNVK 529

Query: 1080 AVFEEMLLSGCAPD 1121
            ++  +M   G  P+
Sbjct: 530  SLLGKMQSQGLLPN 543



 Score = 82.8 bits (203), Expect = 3e-13
 Identities = 69/280 (24%), Positives = 116/280 (41%), Gaps = 37/280 (13%)
 Frame = +3

Query: 396  YNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNKAETLFEEMQ 575
            Y+++I   G+    + +  AF   + + + P  +T+N LI+   +     KA  L   M+
Sbjct: 165  YSILIHALGRS---EKLYEAFLLSQRQTLTP--LTYNALINACARNNDLEKALNLMSRMR 219

Query: 576  EDGCLPCTTTYNIMINSFGRQERWD-------------DVKELLGQM------------- 677
            +DG       Y+++I S  R  + D             D  E+ GQ+             
Sbjct: 220  QDGYQSDFVNYSLIIQSLTRSNKIDSSLLQKLYGEIECDKIEVDGQLLNDIIVGFAKAND 279

Query: 678  -----------QSQGLLPNVVTYTTLVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNA 824
                       Q+ GL P   T   ++   G  GR  +A    E MK  GLKP +  YNA
Sbjct: 280  PSHALKFLAMAQAIGLNPKTATLVAVIYSLGCCGRIAEAEAVFEEMKGTGLKPRTRAYNA 339

Query: 825  LINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDND 1004
            L+  Y + G  + A      M   G+ P     + LI+A+    R   A  VL+ M  N+
Sbjct: 340  LLKGYVKAGSLKDAELVVSEMERSGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEANN 399

Query: 1005 LKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAPDR 1124
            ++P+   Y+ ++ +     ++++   V  EM  +G  PDR
Sbjct: 400  VQPNSFVYSRILASYRNKGEWQRSFQVLREMKSNGIQPDR 439


>gb|EXB56341.1| hypothetical protein L484_024883 [Morus notabilis]
          Length = 734

 Score =  657 bits (1695), Expect = 0.0
 Identities = 315/392 (80%), Positives = 358/392 (91%)
 Frame = +3

Query: 3    NLGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEH 182
            N GR+ EAEA+FEE+K+GGL+PRTRAYNALLKGYVK  +LKDAE +VSEME +GV PDEH
Sbjct: 315  NSGRIVEAEALFEEIKDGGLQPRTRAYNALLKGYVKASSLKDAESVVSEMEMNGVSPDEH 374

Query: 183  TYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEM 362
            TYSLLIDAY NAGRWESARIVLKEMEA+ V+PNSYVFSRILASYRDRGEWQ++FQVL+EM
Sbjct: 375  TYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKTFQVLREM 434

Query: 363  KNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHH 542
            K+ GV PDR FYNVMIDTFGK+NCLDH M  FERM ++GI+PDTVTWNTLI+CHCK G H
Sbjct: 435  KSSGVRPDRHFYNVMIDTFGKFNCLDHAMATFERMILDGIQPDTVTWNTLINCHCKAGRH 494

Query: 543  NKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTL 722
             +AE LFEEMQE G  PC TTYNI+INSFG QERWDDVK LLG+MQSQGLLPNVVTYTTL
Sbjct: 495  ERAEELFEEMQERGYPPCATTYNILINSFGEQERWDDVKVLLGKMQSQGLLPNVVTYTTL 554

Query: 723  VDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGL 902
            +DIYGQSGRF+DA++CL+ MK++GLKPSSTMYNALINAYAQ+GLSEQA+NAFR+MRGDGL
Sbjct: 555  IDIYGQSGRFNDAMDCLQDMKTSGLKPSSTMYNALINAYAQRGLSEQALNAFRLMRGDGL 614

Query: 903  KPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPA 1082
            KPS+LALNSLINAFGEDRRD+EAFAVLQYM++N LKPDVVTYTTLMKAL RV+K++KVP 
Sbjct: 615  KPSILALNSLINAFGEDRRDAEAFAVLQYMKENGLKPDVVTYTTLMKALNRVDKFDKVPV 674

Query: 1083 VFEEMLLSGCAPDRKARAMLRSALKYMKSTLR 1178
            V+EEM+ SGC PDRKAR MLRSAL+YMK TL+
Sbjct: 675  VYEEMISSGCTPDRKAREMLRSALRYMKQTLK 706



 Score =  142 bits (357), Expect = 4e-31
 Identities = 88/374 (23%), Positives = 175/374 (46%), Gaps = 2/374 (0%)
 Frame = +3

Query: 6    LGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHT 185
            LGR ++    F   +   L P T  YNAL+    +   L+ A  +++ M   G   D   
Sbjct: 176  LGRSEKLYEAFLLSQRQTLTPLT--YNALIGACARNDDLEKALNLMARMRQDGFPSDFVN 233

Query: 186  YSLLIDAYGNAGRWESARI--VLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKE 359
            YSL+I +     + +S  +  + KE+E + ++ +  + + I+  +   G+  ++   L  
Sbjct: 234  YSLIIQSLTRKNKIDSPILQKLYKEIECDKIELDGQLLNDIIVGFAKAGDPSQAMHFLAV 293

Query: 360  MKNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGH 539
            ++  G+ P       +I   G    +      FE +K  G++P T  +N L+  + K   
Sbjct: 294  VQAMGLSPKTATLTAVISALGNSGRIVEAEALFEEIKDGGLQPRTRAYNALLKGYVKASS 353

Query: 540  HNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTT 719
               AE++  EM+ +G  P   TY+++I+++    RW+  + +L +M++  + PN   ++ 
Sbjct: 354  LKDAESVVSEMEMNGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSR 413

Query: 720  LVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDG 899
            ++  Y   G +    + L  MKS+G++P    YN +I+ + +    + A+  F  M  DG
Sbjct: 414  ILASYRDRGEWQKTFQVLREMKSSGVRPDRHFYNVMIDTFGKFNCLDHAMATFERMILDG 473

Query: 900  LKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVP 1079
            ++P  +  N+LIN   +  R   A  + + M++    P   TY  L+ +    E+++ V 
Sbjct: 474  IQPDTVTWNTLINCHCKAGRHERAEELFEEMQERGYPPCATTYNILINSFGEQERWDDVK 533

Query: 1080 AVFEEMLLSGCAPD 1121
             +  +M   G  P+
Sbjct: 534  VLLGKMQSQGLLPN 547



 Score = 89.4 bits (220), Expect = 3e-15
 Identities = 60/245 (24%), Positives = 111/245 (45%), Gaps = 2/245 (0%)
 Frame = +3

Query: 396  YNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNKA--ETLFEE 569
            YN +I    + + L+  +    RM+ +G   D V ++ +I    ++   +    + L++E
Sbjct: 199  YNALIGACARNDDLEKALNLMARMRQDGFPSDFVNYSLIIQSLTRKNKIDSPILQKLYKE 258

Query: 570  MQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTLVDIYGQSGR 749
            ++ D         N +I  F +          L  +Q+ GL P   T T ++   G SGR
Sbjct: 259  IECDKIELDGQLLNDIIVGFAKAGDPSQAMHFLAVVQAMGLSPKTATLTAVISALGNSGR 318

Query: 750  FHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNS 929
              +A    E +K  GL+P +  YNAL+  Y +    + A +    M  +G+ P     + 
Sbjct: 319  IVEAEALFEEIKDGGLQPRTRAYNALLKGYVKASSLKDAESVVSEMEMNGVSPDEHTYSL 378

Query: 930  LINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSG 1109
            LI+A+    R   A  VL+ M  ++++P+   ++ ++ +     +++K   V  EM  SG
Sbjct: 379  LIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKTFQVLREMKSSG 438

Query: 1110 CAPDR 1124
              PDR
Sbjct: 439  VRPDR 443



 Score = 74.7 bits (182), Expect = 7e-11
 Identities = 43/185 (23%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
 Frame = +3

Query: 603  TYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTLVDIYGQSGRFHDAI--ECLE 776
            TYN +I +  R +  +    L+ +M+  G   + V Y+ ++    +  +    I  +  +
Sbjct: 198  TYNALIGACARNDDLEKALNLMARMRQDGFPSDFVNYSLIIQSLTRKNKIDSPILQKLYK 257

Query: 777  AMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNSLINAFGEDR 956
             ++   ++    + N +I  +A+ G   QA++   V++  GL P    L ++I+A G   
Sbjct: 258  EIECDKIELDGQLLNDIIVGFAKAGDPSQAMHFLAVVQAMGLSPKTATLTAVISALGNSG 317

Query: 957  RDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAPDRKARA 1136
            R  EA A+ + ++D  L+P    Y  L+K  ++    +   +V  EM ++G +PD    +
Sbjct: 318  RIVEAEALFEEIKDGGLQPRTRAYNALLKGYVKASSLKDAESVVSEMEMNGVSPDEHTYS 377

Query: 1137 MLRSA 1151
            +L  A
Sbjct: 378  LLIDA 382


>ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223551364|gb|EEF52850.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score =  654 bits (1687), Expect = 0.0
 Identities = 319/391 (81%), Positives = 350/391 (89%)
 Frame = +3

Query: 9    GRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHTY 188
            GR+ EAEA+FEE+K+ GLKP+TRAYN LLKGYVK G LKDAE+IVSEME SGV PDE TY
Sbjct: 305  GRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTY 364

Query: 189  SLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEMKN 368
            SLLIDAY NAGRWESARIVLKEMEAN + PNSYVFSRILASYRDRGEWQ+SFQVLKEMKN
Sbjct: 365  SLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKN 424

Query: 369  CGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNK 548
             GV PDR FYNVMIDTFGK++CLDH M  F++M  EGI+PDTVTWNTLIDCHCK   H +
Sbjct: 425  SGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHER 484

Query: 549  AETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTLVD 728
            AE LFEEM E G  PC TT+NIMINSFG QERWDDVK L+G M+S GLLPNVVTYTTL+D
Sbjct: 485  AEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLID 544

Query: 729  IYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLKP 908
            IYG+SGRF DAIECLE MKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFR+MR D LKP
Sbjct: 545  IYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKP 604

Query: 909  SLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVF 1088
            SLLALNSLINAFGEDRRD+EAF+VL+YM++NDLKPDVVTYTTLMKALIRV+K+ KVP+V+
Sbjct: 605  SLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVY 664

Query: 1089 EEMLLSGCAPDRKARAMLRSALKYMKSTLRL 1181
            EEM+L+GC PDRKARAMLRSALKYMK TL L
Sbjct: 665  EEMILAGCTPDRKARAMLRSALKYMKQTLNL 695



 Score =  147 bits (371), Expect = 9e-33
 Identities = 98/408 (24%), Positives = 180/408 (44%), Gaps = 37/408 (9%)
 Frame = +3

Query: 6    LGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHT 185
            LGR ++    F   ++  L P T  YNAL+    +   L+ A  ++S M   G   D   
Sbjct: 164  LGRSEKLYEAFLLSQQQALSPLT--YNALINACARNNDLEKAINLISRMRQDGYPSDFVN 221

Query: 186  YSLLIDA-------------------------------------YGNAGRWESARIVLKE 254
            YSL+I +                                     +  AG    A   L  
Sbjct: 222  YSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGM 281

Query: 255  MEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEMKNCGVHPDRQFYNVMIDTFGKYNC 434
            ++A+G+ P +     ++++  D G    +  + +EMK+ G+ P  + YN ++  + K   
Sbjct: 282  VQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGM 341

Query: 435  LDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNKAETLFEEMQEDGCLPCTTTYNI 614
            L         M+  G+ PD  T++ LID +   G    A  + +EM+ +  +P +  ++ 
Sbjct: 342  LKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSR 401

Query: 615  MINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTLVDIYGQSGRFHDAIECLEAMKSAG 794
            ++ S+  +  W    ++L +M++ G+ P+   Y  ++D +G+      A++  + M S G
Sbjct: 402  ILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEG 461

Query: 795  LKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNSLINAFGEDRRDSEAF 974
            ++P +  +N LI+ + +  L E+A   F  M   G  P +   N +IN+FGE  R  +  
Sbjct: 462  IQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVK 521

Query: 975  AVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAP 1118
             ++  MR   L P+VVTYTTL+    +  ++       E+M  +G  P
Sbjct: 522  TLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKP 569



 Score =  142 bits (357), Expect = 4e-31
 Identities = 81/313 (25%), Positives = 156/313 (49%)
 Frame = +3

Query: 3    NLGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEH 182
            N GR + A  V +E++   + P +  ++ +L  Y   G  + +  ++ EM++SGV PD H
Sbjct: 373  NAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRH 432

Query: 183  TYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEM 362
             Y+++ID +G     + A     +M + G++P++  ++ ++  +      +R+ ++ +EM
Sbjct: 433  FYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEM 492

Query: 363  KNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHH 542
               G  P    +N+MI++FG+    D + T    M+  G+ P+ VT+ TLID + K G  
Sbjct: 493  MEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRF 552

Query: 543  NKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTL 722
            + A    E+M+  G  P +T YN +IN++ ++   +        M++  L P+++   +L
Sbjct: 553  SDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSL 612

Query: 723  VDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGL 902
            ++ +G+  R  +A   L+ MK   LKP    Y  L+ A  +     +  + +  M   G 
Sbjct: 613  INAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYEEMILAGC 672

Query: 903  KPSLLALNSLINA 941
             P   A   L +A
Sbjct: 673  TPDRKARAMLRSA 685



 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 60/244 (24%), Positives = 116/244 (47%), Gaps = 2/244 (0%)
 Frame = +3

Query: 396  YNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNKAETLFEEMQ 575
            Y+++I   G+    + +  AF   + + + P  +T+N LI+   +     KA  L   M+
Sbjct: 157  YSILIHALGRS---EKLYEAFLLSQQQALSP--LTYNALINACARNNDLEKAINLISRMR 211

Query: 576  EDGCLPCTTTYNIMINSFGRQERWDD--VKELLGQMQSQGLLPNVVTYTTLVDIYGQSGR 749
            +DG       Y+++I S  R  R D   +++L  ++Q   L  +V     ++  + ++G 
Sbjct: 212  QDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGD 271

Query: 750  FHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNS 929
             + A+E L  ++++GL P +    A+I+A    G   +A   F  M+ +GLKP   A N 
Sbjct: 272  PNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNG 331

Query: 930  LINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSG 1109
            L+  + +     +A  ++  M  + + PD  TY+ L+ A     ++E    V +EM  + 
Sbjct: 332  LLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANN 391

Query: 1110 CAPD 1121
              P+
Sbjct: 392  IMPN 395


>ref|XP_004292910.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 813

 Score =  653 bits (1684), Expect = 0.0
 Identities = 319/392 (81%), Positives = 353/392 (90%)
 Frame = +3

Query: 3    NLGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEH 182
            N GRV EAEA+FEE+KEGGL+PRTRAYNALLKGYVK  +L+DAE IVS+ME SG+ PDEH
Sbjct: 420  NAGRVVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKAASLEDAESIVSQMERSGISPDEH 479

Query: 183  TYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEM 362
            TYSLLIDAY NAGRWESARIVLKEMEA+ V+PNSYVFSRILASYRDRGEWQ+SFQVL+EM
Sbjct: 480  TYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKSFQVLREM 539

Query: 363  KNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHH 542
            ++ GV PDR FYNVMIDTFGK NCLDH M  FERM  EGI+PDTVTWNTLID HCK GHH
Sbjct: 540  RSSGVMPDRHFYNVMIDTFGKSNCLDHAMATFERMLSEGIQPDTVTWNTLIDIHCKSGHH 599

Query: 543  NKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTL 722
             +AE LFEEMQE GC PC TT+NIMINS G QERWD+VK L+G+MQSQGLLPN+VTYTTL
Sbjct: 600  ARAEELFEEMQESGCAPCATTFNIMINSLGEQERWDEVKGLMGKMQSQGLLPNIVTYTTL 659

Query: 723  VDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGL 902
            VDIYG+SGRF+DAIECLE MKSAGLKPS TMYNALINAYAQ+GLSE A+NAFRVMR DGL
Sbjct: 660  VDIYGKSGRFNDAIECLEIMKSAGLKPSPTMYNALINAYAQRGLSELALNAFRVMRADGL 719

Query: 903  KPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPA 1082
            KPSLLALNSLINAFGEDRRD+EAF+VLQYM++ND+KPDVVTYTTLMKALIRV+K+ KVP 
Sbjct: 720  KPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDVKPDVVTYTTLMKALIRVDKFYKVPD 779

Query: 1083 VFEEMLLSGCAPDRKARAMLRSALKYMKSTLR 1178
            V+EEM+ S   PDRKARAMLRSALKYMK TL+
Sbjct: 780  VYEEMIHSRVTPDRKARAMLRSALKYMKQTLK 811



 Score =  109 bits (273), Expect = 2e-21
 Identities = 88/372 (23%), Positives = 158/372 (42%), Gaps = 38/372 (10%)
 Frame = +3

Query: 117  ALKDAEYIVSEMESSGV-LPDEHTYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVF 293
            +LK A  +V+ ++   +    E  YS+LI A G + +   A ++    +   + P +Y  
Sbjct: 250  SLKQAYALVAWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLL---SQRRTLTPLTY-- 304

Query: 294  SRILASYRDRGEWQRSFQVLKEMKNCGVHPDRQFYNVMIDTFGKYNCLDH--MMTAFERM 467
            + ++ +    G+ +++  ++  M+  G   D   Y+++I +  + N +D   M+  ++ +
Sbjct: 305  NALIGACARNGDLEKALNLMSRMRQDGYRSDFVNYSLVIQSLNRSNKVDSPIMLKLYKEI 364

Query: 468  KVEGIEPDTVTWNTLIDCHCKQGHHNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERW 647
            + E +E D    N LI    K G  ++A      +Q  G  P T T   +I++ G   R 
Sbjct: 365  ESENVEIDGQLLNDLIVGFAKAGEPSQAMHFLAMVQASGLSPKTATLVSVISALGNAGRV 424

Query: 648  DDVKELLGQMQSQGLLPNVVTYTTLVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNAL 827
             + + +  +M+  GL P    Y  L+  Y ++    DA   +  M+ +G+ P    Y+ L
Sbjct: 425  VEAEAIFEEMKEGGLQPRTRAYNALLKGYVKAASLEDAESIVSQMERSGISPDEHTYSLL 484

Query: 828  INAYAQKGLSEQA-----------------------------------VNAFRVMRGDGL 902
            I+AYA  G  E A                                       R MR  G+
Sbjct: 485  IDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKSFQVLREMRSSGV 544

Query: 903  KPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPA 1082
             P     N +I+ FG+      A A  + M    ++PD VT+ TL+    +   + +   
Sbjct: 545  MPDRHFYNVMIDTFGKSNCLDHAMATFERMLSEGIQPDTVTWNTLIDIHCKSGHHARAEE 604

Query: 1083 VFEEMLLSGCAP 1118
            +FEEM  SGCAP
Sbjct: 605  LFEEMQESGCAP 616



 Score = 77.8 bits (190), Expect = 9e-12
 Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
 Frame = +3

Query: 603  TYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTLVDIYGQSGRFHDAI--ECLE 776
            TYN +I +  R    +    L+ +M+  G   + V Y+ ++    +S +    I  +  +
Sbjct: 303  TYNALIGACARNGDLEKALNLMSRMRQDGYRSDFVNYSLVIQSLNRSNKVDSPIMLKLYK 362

Query: 777  AMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNSLINAFGEDR 956
             ++S  ++    + N LI  +A+ G   QA++   +++  GL P    L S+I+A G   
Sbjct: 363  EIESENVEIDGQLLNDLIVGFAKAGEPSQAMHFLAMVQASGLSPKTATLVSVISALGNAG 422

Query: 957  RDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAPDRKARA 1136
            R  EA A+ + M++  L+P    Y  L+K  ++    E   ++  +M  SG +PD    +
Sbjct: 423  RVVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKAASLEDAESIVSQMERSGISPDEHTYS 482

Query: 1137 MLRSA 1151
            +L  A
Sbjct: 483  LLIDA 487


>ref|XP_002306972.1| hypothetical protein POPTR_0005s27160g [Populus trichocarpa]
            gi|222856421|gb|EEE93968.1| hypothetical protein
            POPTR_0005s27160g [Populus trichocarpa]
          Length = 709

 Score =  652 bits (1683), Expect = 0.0
 Identities = 315/393 (80%), Positives = 354/393 (90%)
 Frame = +3

Query: 3    NLGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEH 182
            N GR  EAEA+FEE+++ GLKPRTRAYNALL+GYVK G LKDAE++VSEME SGV P+E 
Sbjct: 317  NCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQ 376

Query: 183  TYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEM 362
            TYS LIDAYGNAGRWESARIVLKEMEA+ V+PN+YVFSRIL+SYRD+GEWQ+SFQVL+EM
Sbjct: 377  TYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREM 436

Query: 363  KNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHH 542
            +N GV PDR FYNVMIDTFGK+NCLDH M  F+RM  EGIEPDTVTWNTLIDCHC+ G H
Sbjct: 437  ENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKH 496

Query: 543  NKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTL 722
            ++AE LFEEM E G  PC TT+NIMINSFG QERWDDVK LL  M+SQGL+PN VTYTTL
Sbjct: 497  DRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTL 556

Query: 723  VDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGL 902
            +DIYG+SGRF+DAIECL+ MK+AGLKPSSTMYNALINAYAQ+GLSEQAV+AFR MR DGL
Sbjct: 557  IDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGL 616

Query: 903  KPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPA 1082
            KPSLLALNSLINAFGEDRRD+EAF VLQYM++NDLKPDVVTYTTLMKALIRVEK++KVP+
Sbjct: 617  KPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPS 676

Query: 1083 VFEEMLLSGCAPDRKARAMLRSALKYMKSTLRL 1181
            V+EEM+LSGC PDRKARAMLRSALKYMK TL L
Sbjct: 677  VYEEMILSGCTPDRKARAMLRSALKYMKQTLEL 709



 Score =  134 bits (336), Expect = 1e-28
 Identities = 91/408 (22%), Positives = 180/408 (44%), Gaps = 37/408 (9%)
 Frame = +3

Query: 6    LGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHT 185
            LG+ ++    F   +   L P T  YNAL+    +   L+ A  +++ M   G   D   
Sbjct: 178  LGQSEKLYEAFLLSQRQNLTPLT--YNALISACARNNDLEKALNLITRMRQDGYPSDFVN 235

Query: 186  YSLLIDAYGNAGRWESARI--VLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKE 359
            YSL+I +     R +SA +  + +E+E + ++ +  + + I+  +   G+  ++ + L  
Sbjct: 236  YSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGV 295

Query: 360  MKNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGH 539
            ++  G+         +I   G           FE M+  G++P T  +N L+  + K G 
Sbjct: 296  VQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGL 355

Query: 540  HNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTT 719
               AE +  EM+  G  P   TY+ +I+++G   RW+  + +L +M++  + PN   ++ 
Sbjct: 356  LKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSR 415

Query: 720  LVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDG 899
            ++  Y   G +  + + L  M+++G++P    YN +I+ + +    + A+  F  M  +G
Sbjct: 416  ILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEG 475

Query: 900  LKPSLLALNSL-----------------------------------INAFGEDRRDSEAF 974
            ++P  +  N+L                                   IN+FG+  R  +  
Sbjct: 476  IEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVK 535

Query: 975  AVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAP 1118
             +L +MR   L P+ VTYTTL+    +  ++       ++M  +G  P
Sbjct: 536  NLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKP 583



 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 71/280 (25%), Positives = 118/280 (42%), Gaps = 37/280 (13%)
 Frame = +3

Query: 396  YNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNKAETLFEEMQ 575
            Y+++I   G+    + +  AF   + + + P  +T+N LI    +     KA  L   M+
Sbjct: 171  YSILIHALGQS---EKLYEAFLLSQRQNLTP--LTYNALISACARNNDLEKALNLITRMR 225

Query: 576  EDGCLPCTTTYNIMINSFGRQERWD------------------DVK-------------- 659
            +DG       Y+++I S  R+ R D                  DV+              
Sbjct: 226  QDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGD 285

Query: 660  -----ELLGQMQSQGLLPNVVTYTTLVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNA 824
                 E LG +Q  GL     T   ++   G  GR  +A    E M+  GLKP +  YNA
Sbjct: 286  LSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNA 345

Query: 825  LINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDND 1004
            L+  Y + GL + A      M   G+ P+    + LI+A+G   R   A  VL+ M  ++
Sbjct: 346  LLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASN 405

Query: 1005 LKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAPDR 1124
            ++P+   ++ ++ +     +++K   V  EM  SG  PDR
Sbjct: 406  VQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDR 445


>ref|XP_006435342.1| hypothetical protein CICLE_v10000451mg [Citrus clementina]
            gi|567885569|ref|XP_006435343.1| hypothetical protein
            CICLE_v10000451mg [Citrus clementina]
            gi|557537464|gb|ESR48582.1| hypothetical protein
            CICLE_v10000451mg [Citrus clementina]
            gi|557537465|gb|ESR48583.1| hypothetical protein
            CICLE_v10000451mg [Citrus clementina]
          Length = 704

 Score =  651 bits (1679), Expect = 0.0
 Identities = 318/392 (81%), Positives = 352/392 (89%)
 Frame = +3

Query: 3    NLGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEH 182
            N GR  EAEAVFEE+KE GLKPRT+A+NALLKGYVK+G LKDAE++VSEME SGVLPDEH
Sbjct: 312  NSGRTIEAEAVFEELKESGLKPRTKAFNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371

Query: 183  TYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEM 362
            TYSLLIDAY NAGRWESARIVLKEME +  KPNS+++SRILA YRDRGEWQR+FQVLKEM
Sbjct: 372  TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431

Query: 363  KNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHH 542
            K+ GV PD  FYNVMIDTFGKYNCL H M AF+RM  EGIEPDT+TWNTLIDCH K G +
Sbjct: 432  KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491

Query: 543  NKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTL 722
            ++AE LFEEMQE G  PCTTTYNIMIN  G QERW+DVK LLG M++QGLLPNVVTYTTL
Sbjct: 492  DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551

Query: 723  VDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGL 902
            VDIYGQSGRF DAIECLE MK+AGLKPSSTMYNALINAYA++GLS+QAVNAFRVMR DGL
Sbjct: 552  VDIYGQSGRFDDAIECLEVMKAAGLKPSSTMYNALINAYARRGLSDQAVNAFRVMRTDGL 611

Query: 903  KPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPA 1082
            KPS LALNSLINAFGED+RD+EAFAVLQYM++N LKPDVVTYTTLMKALIRV+K+ KVPA
Sbjct: 612  KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPA 671

Query: 1083 VFEEMLLSGCAPDRKARAMLRSALKYMKSTLR 1178
            V+EEM+LSGC PDRKARAMLRSAL+YMK TL+
Sbjct: 672  VYEEMILSGCTPDRKARAMLRSALRYMKQTLK 703



 Score =  146 bits (369), Expect = 2e-32
 Identities = 91/374 (24%), Positives = 176/374 (47%), Gaps = 2/374 (0%)
 Frame = +3

Query: 6    LGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHT 185
            LGR ++    F   +   L P T  YNAL+    +   L+ A  ++S+M   G   D   
Sbjct: 173  LGRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230

Query: 186  YSLLIDAYGNAGRWESARI--VLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKE 359
            YSL+I +     + +S+ +  + KE+E + ++ +  + + ++  +   G+  ++ + L  
Sbjct: 231  YSLVIQSLTRTNKIDSSLLHKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290

Query: 360  MKNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGH 539
             +  G+ P    Y  +I               FE +K  G++P T  +N L+  + K G+
Sbjct: 291  AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAFNALLKGYVKMGY 350

Query: 540  HNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTT 719
               AE +  EM+  G LP   TY+++I+++    RW+  + +L +M+     PN   Y+ 
Sbjct: 351  LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410

Query: 720  LVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDG 899
            ++  Y   G +    + L+ MKS+G++P +  YN +I+ + +      A+ AF  M  +G
Sbjct: 411  ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470

Query: 900  LKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVP 1079
            ++P  +  N+LI+   +  R   A  + + M++    P   TY  ++  L   E++E V 
Sbjct: 471  IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530

Query: 1080 AVFEEMLLSGCAPD 1121
             +   M   G  P+
Sbjct: 531  RLLGNMRAQGLLPN 544



 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 73/307 (23%), Positives = 119/307 (38%), Gaps = 38/307 (12%)
 Frame = +3

Query: 396  YNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNKAETLFEEMQ 575
            Y+++I   G+   L       +R ++  +     T+N LI    +     KA  L  +M+
Sbjct: 166  YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220

Query: 576  EDGCLPCTTTYNIMINSFGRQERWDD------VKEL------------------------ 665
            +DG       Y+++I S  R  + D        KE+                        
Sbjct: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSLLHKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280

Query: 666  -------LGQMQSQGLLPNVVTYTTLVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNA 824
                   LG  Q  GL P   TY  ++     SGR  +A    E +K +GLKP +  +NA
Sbjct: 281  ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAFNA 340

Query: 825  LINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDND 1004
            L+  Y + G  + A      M   G+ P     + LI+A+    R   A  VL+ M  + 
Sbjct: 341  LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400

Query: 1005 LKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAPDRK-ARAMLRSALKYMKSTLRL 1181
             KP+   Y+ ++       ++++   V +EM  SG  PD      M+ +  KY       
Sbjct: 401  AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY------- 453

Query: 1182 *LACIHH 1202
               C+HH
Sbjct: 454  --NCLHH 458


>ref|XP_006473770.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Citrus sinensis]
          Length = 704

 Score =  650 bits (1677), Expect = 0.0
 Identities = 318/392 (81%), Positives = 351/392 (89%)
 Frame = +3

Query: 3    NLGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEH 182
            N GR  EAEAVFEE+KE GLKPRT+AYNALLKGYVK+G LKDAE++VSEME SGVLPDEH
Sbjct: 312  NSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGYLKDAEFVVSEMERSGVLPDEH 371

Query: 183  TYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEM 362
            TYSLLIDAY NAGRWESARIVLKEME +  KPNS+++SRILA YRDRGEWQR+FQVLKEM
Sbjct: 372  TYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEM 431

Query: 363  KNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHH 542
            K+ GV PD  FYNVMIDTFGKYNCL H M AF+RM  EGIEPDT+TWNTLIDCH K G +
Sbjct: 432  KSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRY 491

Query: 543  NKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTL 722
            ++AE LFEEMQE G  PCTTTYNIMIN  G QERW+DVK LLG M++QGLLPNVVTYTTL
Sbjct: 492  DRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTTL 551

Query: 723  VDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGL 902
            VDIYGQSGRF DAIECLE MK+AGLKPSSTMYNALINAYA++GLS+QAVNAFRVMR DGL
Sbjct: 552  VDIYGQSGRFDDAIECLEVMKAAGLKPSSTMYNALINAYARRGLSDQAVNAFRVMRTDGL 611

Query: 903  KPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPA 1082
            KPS LALNSLINAFGED+RD+EAFAVLQYM++N LKPDVVTYTTLMKALIRV+K+ KVPA
Sbjct: 612  KPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVPA 671

Query: 1083 VFEEMLLSGCAPDRKARAMLRSALKYMKSTLR 1178
            V+EEM+ SGC PDRKARAMLRSAL+YMK TL+
Sbjct: 672  VYEEMISSGCTPDRKARAMLRSALRYMKQTLK 703



 Score =  147 bits (370), Expect = 1e-32
 Identities = 91/374 (24%), Positives = 176/374 (47%), Gaps = 2/374 (0%)
 Frame = +3

Query: 6    LGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHT 185
            LGR ++    F   +   L P T  YNAL+    +   L+ A  ++S+M   G   D   
Sbjct: 173  LGRSEKLYEAFLLSQRQRLTPLT--YNALISACARNDDLEKALNLMSKMRQDGYHCDFIN 230

Query: 186  YSLLIDAYGNAGRWESARI--VLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKE 359
            YSL+I +     + +S+ +  + KE+E + ++ +  + + ++  +   G+  ++ + L  
Sbjct: 231  YSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGM 290

Query: 360  MKNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGH 539
             +  G+ P    Y  +I               FE +K  G++P T  +N L+  + K G+
Sbjct: 291  AQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNALLKGYVKMGY 350

Query: 540  HNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTT 719
               AE +  EM+  G LP   TY+++I+++    RW+  + +L +M+     PN   Y+ 
Sbjct: 351  LKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSR 410

Query: 720  LVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDG 899
            ++  Y   G +    + L+ MKS+G++P +  YN +I+ + +      A+ AF  M  +G
Sbjct: 411  ILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEG 470

Query: 900  LKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVP 1079
            ++P  +  N+LI+   +  R   A  + + M++    P   TY  ++  L   E++E V 
Sbjct: 471  IEPDTITWNTLIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVK 530

Query: 1080 AVFEEMLLSGCAPD 1121
             +   M   G  P+
Sbjct: 531  RLLGNMRAQGLLPN 544



 Score = 82.0 bits (201), Expect = 5e-13
 Identities = 74/307 (24%), Positives = 119/307 (38%), Gaps = 38/307 (12%)
 Frame = +3

Query: 396  YNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNKAETLFEEMQ 575
            Y+++I   G+   L       +R ++  +     T+N LI    +     KA  L  +M+
Sbjct: 166  YSILIHALGRSEKLYEAFLLSQRQRLTPL-----TYNALISACARNDDLEKALNLMSKMR 220

Query: 576  EDGCLPCTTTYNIMINSFGRQERWDD------VKEL------------------------ 665
            +DG       Y+++I S  R  + D        KE+                        
Sbjct: 221  QDGYHCDFINYSLVIQSLTRTNKIDSSLLQKLYKEIECDKIELDGQLLNDVIVGFAKAGD 280

Query: 666  -------LGQMQSQGLLPNVVTYTTLVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNA 824
                   LG  Q  GL P   TY  ++     SGR  +A    E +K +GLKP +  YNA
Sbjct: 281  ASKAMRFLGMAQGVGLSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAYNA 340

Query: 825  LINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDND 1004
            L+  Y + G  + A      M   G+ P     + LI+A+    R   A  VL+ M  + 
Sbjct: 341  LLKGYVKMGYLKDAEFVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSH 400

Query: 1005 LKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAPDRK-ARAMLRSALKYMKSTLRL 1181
             KP+   Y+ ++       ++++   V +EM  SG  PD      M+ +  KY       
Sbjct: 401  AKPNSFIYSRILAGYRDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKY------- 453

Query: 1182 *LACIHH 1202
               C+HH
Sbjct: 454  --NCLHH 458


>ref|XP_006279580.1| hypothetical protein CARUB_v10025981mg [Capsella rubella]
            gi|482548284|gb|EOA12478.1| hypothetical protein
            CARUB_v10025981mg [Capsella rubella]
          Length = 708

 Score =  650 bits (1677), Expect = 0.0
 Identities = 312/390 (80%), Positives = 352/390 (90%)
 Frame = +3

Query: 9    GRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHTY 188
            GR DEAEA+FEE+++ G+KPRT+AYNALLKGYVK G LKDAE +VSEME  GV PDEHTY
Sbjct: 317  GRTDEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 376

Query: 189  SLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEMKN 368
            SLLIDAY NAGRWESARIVLKEMEA  V+PNS+VFSR+LA YRDRGEWQ++FQVLKEMK+
Sbjct: 377  SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKS 436

Query: 369  CGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNK 548
             GV PDRQFYNV+IDTFGK+NCLDH MT F+RM  EGIEPD VTWNTLIDCHCK G H  
Sbjct: 437  IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV 496

Query: 549  AETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTLVD 728
            AE +FE M+  GCLPC TTYNIMINS+G QERWDD+K LLG+M+SQG+LPNVVT+TTLVD
Sbjct: 497  AEDMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 556

Query: 729  IYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLKP 908
            +YG+SGRF+DAIECLE MKS GLKPSSTMYNALINAYAQ+GLSEQAVNAFRVM  DGLKP
Sbjct: 557  VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 616

Query: 909  SLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVF 1088
            SLLALNSLINAFGEDRRD+EAFAVLQYM++N +KPDVVTYTTLMKALIRV+K++KVP V+
Sbjct: 617  SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVY 676

Query: 1089 EEMLLSGCAPDRKARAMLRSALKYMKSTLR 1178
            EEM++SGC PDRKAR+MLRSAL+YMK TLR
Sbjct: 677  EEMIMSGCKPDRKARSMLRSALRYMKQTLR 706



 Score =  134 bits (336), Expect = 1e-28
 Identities = 95/408 (23%), Positives = 182/408 (44%), Gaps = 37/408 (9%)
 Frame = +3

Query: 6    LGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHT 185
            LGR ++    F   ++  L P T  YNAL+    +   ++ A  ++S+M   G   D   
Sbjct: 176  LGRSEKLYEAFLLSQKQTLTPLT--YNALIGACARNNDIEKALNLISKMRQDGYQSDFVN 233

Query: 186  YSLLIDAYGNAGRWESARI--VLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKE 359
            YSL+I +   + + +S  +  + KE+E + ++ +  + + I+  +   G+  R+ Q+L  
Sbjct: 234  YSLVIQSLTRSNKIDSVMLQRLYKEIERDKLEFDVQLVNDIIMGFAKSGDPSRALQLLGM 293

Query: 360  MKNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGH 539
             +  G+         +I         D     FE ++  GI+P T  +N L+  + K G 
Sbjct: 294  AQATGLSAKTATLVSIISALASSGRTDEAEALFEELRQSGIKPRTKAYNALLKGYVKTGP 353

Query: 540  HNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTT 719
               AE++  EM++ G  P   TY+++I+++    RW+  + +L +M++  + PN   ++ 
Sbjct: 354  LKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSR 413

Query: 720  LVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDG 899
            L+  Y   G +    + L+ MKS G+KP    YN +I+ + +    + A+  F  M  +G
Sbjct: 414  LLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG 473

Query: 900  LKPSLLALNSL-----------------------------------INAFGEDRRDSEAF 974
            ++P  +  N+L                                   IN++G+  R  +  
Sbjct: 474  IEPDRVTWNTLIDCHCKHGRHIVAEDMFEAMERRGCLPCATTYNIMINSYGDQERWDDMK 533

Query: 975  AVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAP 1118
             +L  M+   + P+VVT+TTL+    +  ++       EEM   G  P
Sbjct: 534  RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 581



 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 66/281 (23%), Positives = 116/281 (41%), Gaps = 37/281 (13%)
 Frame = +3

Query: 396  YNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNKAETLFEEMQ 575
            Y+++I   G+    + +  AF   + + + P  +T+N LI    +     KA  L  +M+
Sbjct: 169  YSILIHALGRS---EKLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALNLISKMR 223

Query: 576  EDGCLPCTTTYNIMINSFGRQERWDDVK-------------------------------- 659
            +DG       Y+++I S  R  + D V                                 
Sbjct: 224  QDGYQSDFVNYSLVIQSLTRSNKIDSVMLQRLYKEIERDKLEFDVQLVNDIIMGFAKSGD 283

Query: 660  -----ELLGQMQSQGLLPNVVTYTTLVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNA 824
                 +LLG  Q+ GL     T  +++     SGR  +A    E ++ +G+KP +  YNA
Sbjct: 284  PSRALQLLGMAQATGLSAKTATLVSIISALASSGRTDEAEALFEELRQSGIKPRTKAYNA 343

Query: 825  LINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDND 1004
            L+  Y + G  + A +    M   G+ P     + LI+A+    R   A  VL+ M   D
Sbjct: 344  LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 403

Query: 1005 LKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAPDRK 1127
            ++P+   ++ L+       +++K   V +EM   G  PDR+
Sbjct: 404  VQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQ 444


>ref|XP_004500883.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X2 [Cicer arietinum]
          Length = 691

 Score =  647 bits (1668), Expect = 0.0
 Identities = 309/392 (78%), Positives = 351/392 (89%)
 Frame = +3

Query: 3    NLGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEH 182
            N GR  EAEA+FEE+KE GL+PRTRAYNALLKGYVK G+LKDAE++VSEME SGVLPDEH
Sbjct: 299  NSGRTVEAEALFEEIKESGLEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKSGVLPDEH 358

Query: 183  TYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEM 362
            TYSLL+DAY +AGRWESARIVLKEMEA+ ++PNS+++SRILASYRD+GEWQ+SFQVLKEM
Sbjct: 359  TYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQKSFQVLKEM 418

Query: 363  KNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHH 542
            K+CGV PDR FYNVMIDTFGKYNCLDH M  FERM  EGI PDTVTWNTLIDCHCK G H
Sbjct: 419  KSCGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRH 478

Query: 543  NKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTL 722
             +AE LFEEMQ+ G  PC  TYNIMINS G QERWD V +LL +MQSQGLLPN VTYTTL
Sbjct: 479  YRAEELFEEMQQSGYSPCVMTYNIMINSMGTQERWDRVSDLLSRMQSQGLLPNAVTYTTL 538

Query: 723  VDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGL 902
            VDIYG+SGRF+DAIEC++ +KS G KP+STMYNALINAYAQ+GLS+ AVNAFR+M  +GL
Sbjct: 539  VDIYGKSGRFNDAIECIDVLKSLGFKPTSTMYNALINAYAQRGLSDLAVNAFRMMAAEGL 598

Query: 903  KPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPA 1082
             PSLLALNSLINAFGEDRRD+EAFAVLQYM++N ++PDVVTYTTLMK+LIRV+KY KVPA
Sbjct: 599  TPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVEPDVVTYTTLMKSLIRVDKYPKVPA 658

Query: 1083 VFEEMLLSGCAPDRKARAMLRSALKYMKSTLR 1178
            V+EEM++SGCAPDRKARAMLRSAL+YMK TLR
Sbjct: 659  VYEEMVMSGCAPDRKARAMLRSALRYMKQTLR 690



 Score = 83.2 bits (204), Expect = 2e-13
 Identities = 68/280 (24%), Positives = 113/280 (40%), Gaps = 37/280 (13%)
 Frame = +3

Query: 396  YNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNKAETLFEEMQ 575
            Y+++I   G+    + +  AF   + + + P  +T+N LI    + G   KA  L   M+
Sbjct: 153  YSILIHALGRN---EKLYEAFLLSQRQVLTP--LTYNALIGACARNGDLEKALNLMSRMR 207

Query: 576  EDGCLPCTTTYNIMINSFGRQERWDD---------------------------------- 653
             DG  P    Y+ +I S  R  R D                                   
Sbjct: 208  RDGFQPDFVNYSSIIKSLTRSNRIDSPILQKLYAEIETDKIEADGHLLNDIILGFSKAGD 267

Query: 654  ---VKELLGQMQSQGLLPNVVTYTTLVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNA 824
                   L   Q +GL P   T+  ++   G SGR  +A    E +K +GL+P +  YNA
Sbjct: 268  ATRAMHFLAVAQGKGLCPKTGTFVAVILALGNSGRTVEAEALFEEIKESGLEPRTRAYNA 327

Query: 825  LINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDND 1004
            L+  Y + G  + A      M   G+ P     + L++A+    R   A  VL+ M  ++
Sbjct: 328  LLKGYVKTGSLKDAEFVVSEMEKSGVLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASN 387

Query: 1005 LKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAPDR 1124
            L+P+   Y+ ++ +     +++K   V +EM   G  PDR
Sbjct: 388  LQPNSFIYSRILASYRDKGEWQKSFQVLKEMKSCGVQPDR 427


>ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297311376|gb|EFH41800.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 711

 Score =  647 bits (1668), Expect = 0.0
 Identities = 311/392 (79%), Positives = 351/392 (89%)
 Frame = +3

Query: 3    NLGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEH 182
            N GR  EAEA+FEE+++ G+KPRT+AYNALLKGYVK G LKDAE +VSEME  GV PDEH
Sbjct: 318  NSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEH 377

Query: 183  TYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEM 362
            TYSLLIDAY NAGRWESARIVLKEME   V+PNS+VFSR+LA YRDRGEWQ++FQVLKEM
Sbjct: 378  TYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEM 437

Query: 363  KNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHH 542
            K+ GV PDRQFYNV+IDTFGK+NCLDH MT F+RM  EGIEPD VTWNTLIDCHCK G H
Sbjct: 438  KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRH 497

Query: 543  NKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTL 722
              AE +FE M+  GCLPC TTYNIMINS+G QERWDD+K LLG+M+SQG+LPNVVT+TTL
Sbjct: 498  IVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTL 557

Query: 723  VDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGL 902
            VD+YG+SGRF+DAIECLE MKS GLKPSSTMYNALINAYAQ+GLSEQAVNAFRVM  DGL
Sbjct: 558  VDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGL 617

Query: 903  KPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPA 1082
            KPSLLALNSLINAFGEDRRD+EAFAVLQYM++N +KPDVVTYTTLMKALIRV+K++KVP 
Sbjct: 618  KPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPG 677

Query: 1083 VFEEMLLSGCAPDRKARAMLRSALKYMKSTLR 1178
            V+EEM++SGC PDRKAR+MLRSAL+YMK TLR
Sbjct: 678  VYEEMIMSGCKPDRKARSMLRSALRYMKQTLR 709



 Score =  129 bits (324), Expect = 3e-27
 Identities = 87/374 (23%), Positives = 172/374 (45%), Gaps = 2/374 (0%)
 Frame = +3

Query: 6    LGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHT 185
            LGR ++    F   ++  L P T  YNAL+    +   ++ A  ++S M   G   D   
Sbjct: 179  LGRSEKLYEAFLLSQKQTLTPLT--YNALIGACARNNDIEKALNLISRMRQDGYQSDFVN 236

Query: 186  YSLLIDAYGNAGRWESARI--VLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKE 359
            YSL+I +     + +S  +  + KE+E + ++ +  + + I+  +   G+  R+ Q+L  
Sbjct: 237  YSLVIQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGM 296

Query: 360  MKNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGH 539
             +  G+         +I               FE ++  GI+P T  +N L+  + K G 
Sbjct: 297  AQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGP 356

Query: 540  HNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTT 719
               AE +  EM++ G  P   TY+++I+++    RW+  + +L +M++  + PN   ++ 
Sbjct: 357  LKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSR 416

Query: 720  LVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDG 899
            L+  Y   G +    + L+ MKS G+KP    YN +I+ + +    + A+  F  M  +G
Sbjct: 417  LLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG 476

Query: 900  LKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVP 1079
            ++P  +  N+LI+   +  R   A  + + M      P   TY  ++ +    E+++ + 
Sbjct: 477  IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMK 536

Query: 1080 AVFEEMLLSGCAPD 1121
             +  +M   G  P+
Sbjct: 537  RLLGKMKSQGILPN 550



 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 57/244 (23%), Positives = 111/244 (45%), Gaps = 2/244 (0%)
 Frame = +3

Query: 396  YNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNKAETLFEEMQ 575
            Y+++I   G+    + +  AF   + + + P  +T+N LI    +     KA  L   M+
Sbjct: 172  YSILIHALGRS---EKLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALNLISRMR 226

Query: 576  EDGCLPCTTTYNIMINSFGRQERWDDV--KELLGQMQSQGLLPNVVTYTTLVDIYGQSGR 749
            +DG       Y+++I S  R  + D V  + L  +++   L  +V     ++  + +SG 
Sbjct: 227  QDGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGD 286

Query: 750  FHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNS 929
               A++ L   ++ GL   +    ++I+A A  G + +A   F  +R  G+KP   A N+
Sbjct: 287  PSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNA 346

Query: 930  LINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSG 1109
            L+  + +     +A  ++  M    + PD  TY+ L+ A +   ++E    V +EM    
Sbjct: 347  LLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGD 406

Query: 1110 CAPD 1121
              P+
Sbjct: 407  VQPN 410


>dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
          Length = 680

 Score =  646 bits (1666), Expect = 0.0
 Identities = 311/390 (79%), Positives = 351/390 (90%)
 Frame = +3

Query: 9    GRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHTY 188
            GR  EAEA+FEE+++ G+KPRTRAYNALLKGYVK G LKDAE +VSEME  GV PDEHTY
Sbjct: 289  GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 348

Query: 189  SLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEMKN 368
            SLLIDAY NAGRWESARIVLKEMEA  V+PNS+VFSR+LA +RDRGEWQ++FQVLKEMK+
Sbjct: 349  SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 408

Query: 369  CGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNK 548
             GV PDRQFYNV+IDTFGK+NCLDH MT F+RM  EGIEPD VTWNTLIDCHCK G H  
Sbjct: 409  IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV 468

Query: 549  AETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTLVD 728
            AE +FE M+  GCLPC TTYNIMINS+G QERWDD+K LLG+M+SQG+LPNVVT+TTLVD
Sbjct: 469  AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 528

Query: 729  IYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLKP 908
            +YG+SGRF+DAIECLE MKS GLKPSSTMYNALINAYAQ+GLSEQAVNAFRVM  DGLKP
Sbjct: 529  VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 588

Query: 909  SLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVF 1088
            SLLALNSLINAFGEDRRD+EAFAVLQYM++N +KPDVVTYTTLMKALIRV+K++KVP V+
Sbjct: 589  SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY 648

Query: 1089 EEMLLSGCAPDRKARAMLRSALKYMKSTLR 1178
            EEM++SGC PDRKAR+MLRSAL+YMK TLR
Sbjct: 649  EEMIMSGCKPDRKARSMLRSALRYMKQTLR 678



 Score =  127 bits (318), Expect = 1e-26
 Identities = 91/408 (22%), Positives = 173/408 (42%), Gaps = 37/408 (9%)
 Frame = +3

Query: 6    LGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHT 185
            LGR ++    F   ++  L P T  YNAL+    +   ++ A  ++++M   G   D   
Sbjct: 148  LGRSEKLYEAFLLSQKQTLTPLT--YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVN 205

Query: 186  YSLLIDAYGNAGRWESARI--VLKEME--------------------------------- 260
            YSL+I +   + + +S  +  + KE+E                                 
Sbjct: 206  YSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGM 265

Query: 261  --ANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEMKNCGVHPDRQFYNVMIDTFGKYNC 434
              A G+   +     I+++  D G    +  + +E++  G+ P  + YN ++  + K   
Sbjct: 266  AQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGP 325

Query: 435  LDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNKAETLFEEMQEDGCLPCTTTYNI 614
            L    +    M+  G+ PD  T++ LID +   G    A  + +EM+     P +  ++ 
Sbjct: 326  LKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSR 385

Query: 615  MINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTLVDIYGQSGRFHDAIECLEAMKSAG 794
            ++  F  +  W    ++L +M+S G+ P+   Y  ++D +G+      A+   + M S G
Sbjct: 386  LLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG 445

Query: 795  LKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNSLINAFGEDRRDSEAF 974
            ++P    +N LI+ + + G    A   F  M   G  P     N +IN++G+  R  +  
Sbjct: 446  IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMK 505

Query: 975  AVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAP 1118
             +L  M+   + P+VVT+TTL+    +  ++       EEM   G  P
Sbjct: 506  RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 553



 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 71/318 (22%), Positives = 139/318 (43%), Gaps = 2/318 (0%)
 Frame = +3

Query: 177  EHTYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLK 356
            E  YS+LI A G + +   A ++ ++     +  N+     ++ +     + +++  ++ 
Sbjct: 138  ELLYSILIHALGRSEKLYEAFLLSQKQTLTPLTYNA-----LIGACARNNDIEKALNLIA 192

Query: 357  EMKNCGVHPDRQFYNVMIDTFGKYNCLDHMMTA--FERMKVEGIEPDTVTWNTLIDCHCK 530
            +M+  G   D   Y+++I +  + N +D +M    ++ ++ + +E D    N +I    K
Sbjct: 193  KMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAK 252

Query: 531  QGHHNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVT 710
             G  +KA  L    Q  G    T T   +I++     R  + + L  +++  G+ P    
Sbjct: 253  SGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRA 312

Query: 711  YTTLVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMR 890
            Y  L+  Y ++G   DA   +  M+  G+ P    Y+ LI+AY   G  E A    + M 
Sbjct: 313  YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME 372

Query: 891  GDGLKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYE 1070
               ++P+    + L+  F +     + F VL+ M+   +KPD   Y  ++    +    +
Sbjct: 373  AGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLD 432

Query: 1071 KVPAVFEEMLLSGCAPDR 1124
                 F+ ML  G  PDR
Sbjct: 433  HAMTTFDRMLSEGIEPDR 450


>ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75154282|sp|Q8L844.1|PP413_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g42310, mitochondrial; Flags: Precursor
            gi|21539517|gb|AAM53311.1| maize crp1 protein-like
            [Arabidopsis thaliana] gi|332007411|gb|AED94794.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 709

 Score =  646 bits (1666), Expect = 0.0
 Identities = 311/390 (79%), Positives = 351/390 (90%)
 Frame = +3

Query: 9    GRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHTY 188
            GR  EAEA+FEE+++ G+KPRTRAYNALLKGYVK G LKDAE +VSEME  GV PDEHTY
Sbjct: 318  GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377

Query: 189  SLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEMKN 368
            SLLIDAY NAGRWESARIVLKEMEA  V+PNS+VFSR+LA +RDRGEWQ++FQVLKEMK+
Sbjct: 378  SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437

Query: 369  CGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNK 548
             GV PDRQFYNV+IDTFGK+NCLDH MT F+RM  EGIEPD VTWNTLIDCHCK G H  
Sbjct: 438  IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV 497

Query: 549  AETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTLVD 728
            AE +FE M+  GCLPC TTYNIMINS+G QERWDD+K LLG+M+SQG+LPNVVT+TTLVD
Sbjct: 498  AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557

Query: 729  IYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLKP 908
            +YG+SGRF+DAIECLE MKS GLKPSSTMYNALINAYAQ+GLSEQAVNAFRVM  DGLKP
Sbjct: 558  VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617

Query: 909  SLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVF 1088
            SLLALNSLINAFGEDRRD+EAFAVLQYM++N +KPDVVTYTTLMKALIRV+K++KVP V+
Sbjct: 618  SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY 677

Query: 1089 EEMLLSGCAPDRKARAMLRSALKYMKSTLR 1178
            EEM++SGC PDRKAR+MLRSAL+YMK TLR
Sbjct: 678  EEMIMSGCKPDRKARSMLRSALRYMKQTLR 707



 Score =  127 bits (318), Expect = 1e-26
 Identities = 91/408 (22%), Positives = 173/408 (42%), Gaps = 37/408 (9%)
 Frame = +3

Query: 6    LGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHT 185
            LGR ++    F   ++  L P T  YNAL+    +   ++ A  ++++M   G   D   
Sbjct: 177  LGRSEKLYEAFLLSQKQTLTPLT--YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVN 234

Query: 186  YSLLIDAYGNAGRWESARI--VLKEME--------------------------------- 260
            YSL+I +   + + +S  +  + KE+E                                 
Sbjct: 235  YSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGM 294

Query: 261  --ANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEMKNCGVHPDRQFYNVMIDTFGKYNC 434
              A G+   +     I+++  D G    +  + +E++  G+ P  + YN ++  + K   
Sbjct: 295  AQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGP 354

Query: 435  LDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNKAETLFEEMQEDGCLPCTTTYNI 614
            L    +    M+  G+ PD  T++ LID +   G    A  + +EM+     P +  ++ 
Sbjct: 355  LKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSR 414

Query: 615  MINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTLVDIYGQSGRFHDAIECLEAMKSAG 794
            ++  F  +  W    ++L +M+S G+ P+   Y  ++D +G+      A+   + M S G
Sbjct: 415  LLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG 474

Query: 795  LKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNSLINAFGEDRRDSEAF 974
            ++P    +N LI+ + + G    A   F  M   G  P     N +IN++G+  R  +  
Sbjct: 475  IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMK 534

Query: 975  AVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAP 1118
             +L  M+   + P+VVT+TTL+    +  ++       EEM   G  P
Sbjct: 535  RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 582



 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 71/318 (22%), Positives = 139/318 (43%), Gaps = 2/318 (0%)
 Frame = +3

Query: 177  EHTYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLK 356
            E  YS+LI A G + +   A ++ ++     +  N+     ++ +     + +++  ++ 
Sbjct: 167  ELLYSILIHALGRSEKLYEAFLLSQKQTLTPLTYNA-----LIGACARNNDIEKALNLIA 221

Query: 357  EMKNCGVHPDRQFYNVMIDTFGKYNCLDHMMTA--FERMKVEGIEPDTVTWNTLIDCHCK 530
            +M+  G   D   Y+++I +  + N +D +M    ++ ++ + +E D    N +I    K
Sbjct: 222  KMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAK 281

Query: 531  QGHHNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVT 710
             G  +KA  L    Q  G    T T   +I++     R  + + L  +++  G+ P    
Sbjct: 282  SGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRA 341

Query: 711  YTTLVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMR 890
            Y  L+  Y ++G   DA   +  M+  G+ P    Y+ LI+AY   G  E A    + M 
Sbjct: 342  YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME 401

Query: 891  GDGLKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYE 1070
               ++P+    + L+  F +     + F VL+ M+   +KPD   Y  ++    +    +
Sbjct: 402  AGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLD 461

Query: 1071 KVPAVFEEMLLSGCAPDR 1124
                 F+ ML  G  PDR
Sbjct: 462  HAMTTFDRMLSEGIEPDR 479


>ref|XP_006405260.1| hypothetical protein EUTSA_v10027665mg [Eutrema salsugineum]
            gi|557106398|gb|ESQ46713.1| hypothetical protein
            EUTSA_v10027665mg [Eutrema salsugineum]
          Length = 704

 Score =  644 bits (1661), Expect = 0.0
 Identities = 310/392 (79%), Positives = 352/392 (89%)
 Frame = +3

Query: 3    NLGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEH 182
            N GR  EAEA+FEE+++ G+KPRT+AYNALLKGYVK G LKDAE +VSEME  GV PDEH
Sbjct: 311  NSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEH 370

Query: 183  TYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEM 362
            TYSLLIDAY NAGRWESARIVLKEMEA  V+PNS+VFSR+LA YRDRGEWQ++FQVLKEM
Sbjct: 371  TYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEM 430

Query: 363  KNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHH 542
            K+ GV PDRQFYNV+IDTFGK+NCLDH MT F+RM  EGIEPD VTWNTLIDCHCK G H
Sbjct: 431  KSLGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRH 490

Query: 543  NKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTL 722
              AE +FE M++ GCLPC TTYNIMINS+G QERW+D+K LLG+M+SQG+LPNVVT+TTL
Sbjct: 491  IVAEEMFEAMEKRGCLPCATTYNIMINSYGDQERWNDMKRLLGKMKSQGVLPNVVTHTTL 550

Query: 723  VDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGL 902
            VD+YG+SGRF+DAIECLE MKS GLKPSSTMYNALINAYAQ+GLSEQAVNAFRVM  DGL
Sbjct: 551  VDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGL 610

Query: 903  KPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPA 1082
            KPSLLALNSLINAFGEDRRD+EAFAVLQYM++N + PDVVTYTTLMKALIRV+K++KVP 
Sbjct: 611  KPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVNPDVVTYTTLMKALIRVDKFQKVPG 670

Query: 1083 VFEEMLLSGCAPDRKARAMLRSALKYMKSTLR 1178
            V+EEM++SGC PDRKAR+MLRSAL+YMK TLR
Sbjct: 671  VYEEMIMSGCKPDRKARSMLRSALRYMKQTLR 702



 Score =  131 bits (330), Expect = 5e-28
 Identities = 95/408 (23%), Positives = 182/408 (44%), Gaps = 37/408 (9%)
 Frame = +3

Query: 6    LGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHT 185
            LGR ++    F   ++  L P T  YNAL+    +   ++ A  ++S M   G   D   
Sbjct: 172  LGRSEKLYEAFLLSQKQTLTPLT--YNALIGACARNNDIEKALNLISRMRRDGYQSDFVN 229

Query: 186  YSLLIDAYGNAGRWESARI--VLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKE 359
            YSL+I A   + + +SA +  + +E+E + ++ +  + + I+  +   G+  R+ Q+L  
Sbjct: 230  YSLVIQALTRSNKIDSALLQRLYREIERDKLELDVQLVNDIIMGFAKSGDPSRALQILGM 289

Query: 360  MKNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGH 539
             +  G+         +I               FE ++  GI+P T  +N L+  + K G 
Sbjct: 290  AQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGP 349

Query: 540  HNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTT 719
               AE++  EM++ G  P   TY+++I+++    RW+  + +L +M++  + PN   ++ 
Sbjct: 350  LKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSR 409

Query: 720  LVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDG 899
            L+  Y   G +    + L+ MKS G+KP    YN +I+ + +    + A+  F  M  +G
Sbjct: 410  LLAGYRDRGEWQKTFQVLKEMKSLGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG 469

Query: 900  LKPSLLALNSL-----------------------------------INAFGEDRRDSEAF 974
            ++P  +  N+L                                   IN++G+  R ++  
Sbjct: 470  IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMEKRGCLPCATTYNIMINSYGDQERWNDMK 529

Query: 975  AVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAP 1118
             +L  M+   + P+VVT+TTL+    +  ++       EEM   G  P
Sbjct: 530  RLLGKMKSQGVLPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 577


>ref|XP_002301924.1| hypothetical protein POPTR_0002s01200g [Populus trichocarpa]
            gi|222843650|gb|EEE81197.1| hypothetical protein
            POPTR_0002s01200g [Populus trichocarpa]
          Length = 709

 Score =  641 bits (1653), Expect = 0.0
 Identities = 307/391 (78%), Positives = 352/391 (90%)
 Frame = +3

Query: 3    NLGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEH 182
            N GR +EAEA+FEE+++ GL+PRTRAYNALL+GYVK G L+DAE++VSEME SGVLP+E 
Sbjct: 318  NCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQ 377

Query: 183  TYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEM 362
            TYSLLIDAYGNA RWESARIVLKEMEA+ V+PN+YVFSRILASYRD+GEWQ++FQVL+EM
Sbjct: 378  TYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREM 437

Query: 363  KNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHH 542
            ++ GV PDR FYNV+IDTFGK+NCLDH M  F+RM  EGIEPDT+TWNTL+DCHCK G H
Sbjct: 438  EDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKH 497

Query: 543  NKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTL 722
            ++AE LFEEM E G LPC TT+NIMINSFG QERWDDVK LL  M+SQGLLPN VTYTTL
Sbjct: 498  DRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTL 557

Query: 723  VDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGL 902
            +DIYG+SGRF DAIECL+ MK+AGLKPSSTMYNAL+NAYAQ+GLS+QAV+AF  MR DGL
Sbjct: 558  IDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGL 617

Query: 903  KPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPA 1082
            KPSLLALNSLINAFG+DRRD EAF VLQYM++NDLKPDVVTYTTLMKALI VEK++KVP+
Sbjct: 618  KPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKVPS 677

Query: 1083 VFEEMLLSGCAPDRKARAMLRSALKYMKSTL 1175
            V+EEM+LSGC PDRKARAMLRSALKYMK TL
Sbjct: 678  VYEEMILSGCTPDRKARAMLRSALKYMKQTL 708



 Score =  137 bits (346), Expect = 7e-30
 Identities = 91/408 (22%), Positives = 182/408 (44%), Gaps = 37/408 (9%)
 Frame = +3

Query: 6    LGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHT 185
            LG+ ++    F   ++  L P T  YNAL+    +   ++ A  ++  M   G   D   
Sbjct: 179  LGQSEKLYEAFLLSQKQNLTPLT--YNALISACARNNDIEKALNLICRMREDGYPSDLVN 236

Query: 186  YSLLIDAYGNAGRWESARI--VLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKE 359
            YSL+I +     R  S+ +  + +E++ + ++ +  +++ I+  +   G+  ++ + L  
Sbjct: 237  YSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGV 296

Query: 360  MKNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGH 539
            ++  G+         +I   G     +     FE M+  G++P T  +N L+  + K G 
Sbjct: 297  VQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGL 356

Query: 540  HNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTT 719
               AE +  EM+  G LP   TY+++I+++G  ERW+  + +L +M++  + PN   ++ 
Sbjct: 357  LRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSR 416

Query: 720  LVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDG 899
            ++  Y   G +    + L  M+ +G++P    YN LI+ + +    + A+  F  M  +G
Sbjct: 417  ILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEG 476

Query: 900  LKPSLLALNSL-----------------------------------INAFGEDRRDSEAF 974
            ++P  +  N+L                                   IN+FG+  R  +  
Sbjct: 477  IEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVK 536

Query: 975  AVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAP 1118
             +L  MR   L P+ VTYTTL+    +  +++      ++M  +G  P
Sbjct: 537  NLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKP 584



 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 70/280 (25%), Positives = 117/280 (41%), Gaps = 37/280 (13%)
 Frame = +3

Query: 396  YNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNKAETLFEEMQ 575
            Y+++I   G+    + +  AF   + + + P  +T+N LI    +     KA  L   M+
Sbjct: 172  YSILIHALGQS---EKLYEAFLLSQKQNLTP--LTYNALISACARNNDIEKALNLICRMR 226

Query: 576  EDGCLPCTTTYNIMINSFGRQER------------------------WDDV--------- 656
            EDG       Y+++I S  +  R                        W+D+         
Sbjct: 227  EDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGD 286

Query: 657  ----KELLGQMQSQGLLPNVVTYTTLVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNA 824
                 E LG +Q  GL     T  T++   G  GR  +A    E M+  GL+P +  YNA
Sbjct: 287  LDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNA 346

Query: 825  LINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDND 1004
            L+  Y + GL   A      M   G+ P+    + LI+A+G   R   A  VL+ M  ++
Sbjct: 347  LLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASN 406

Query: 1005 LKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAPDR 1124
            ++P+   ++ ++ +     +++K   V  EM  SG  PDR
Sbjct: 407  VQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDR 446


>ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Cucumis sativus]
            gi|449489420|ref|XP_004158306.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Cucumis sativus]
          Length = 720

 Score =  633 bits (1633), Expect = e-179
 Identities = 303/393 (77%), Positives = 351/393 (89%)
 Frame = +3

Query: 3    NLGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEH 182
            N GR +EAEA+FEE+KEGGLKPR +A+NALLKGY + G+LK+AE I+SEME SG+ PDEH
Sbjct: 328  NHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEH 387

Query: 183  TYSLLIDAYGNAGRWESARIVLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKEM 362
            TY LL+DAY N GRWESAR +LK+MEA  V+PN+++FSRILASYRDRGEWQ++F+VL+EM
Sbjct: 388  TYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREM 447

Query: 363  KNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHH 542
            KN  V PDR FYNVMIDTFGK+NCLDH M  ++RM  EGIEPD VTWNTLIDCH K G+H
Sbjct: 448  KNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYH 507

Query: 543  NKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTTL 722
            ++A  LFEEMQE G LPC TTYNIMINS G QE+WD+VK LLG+MQSQGLLPNVVTYTTL
Sbjct: 508  DRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTL 567

Query: 723  VDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDGL 902
            VDIYG SGRF+DAI+CLEAMKSAGLKPS+TMYNALINA+AQ+GLSEQAVNA+RVM  DGL
Sbjct: 568  VDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGL 627

Query: 903  KPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVPA 1082
            +PSLLALNSLINAFGEDRRD EAF++LQYM++ND+KPDVVTYTTLMKALIRV+K++KVPA
Sbjct: 628  RPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPA 687

Query: 1083 VFEEMLLSGCAPDRKARAMLRSALKYMKSTLRL 1181
            V+EEM+LSGC PD KARAMLRSAL+YMK TL L
Sbjct: 688  VYEEMILSGCTPDGKARAMLRSALRYMKRTLSL 720



 Score =  150 bits (378), Expect = 1e-33
 Identities = 86/374 (22%), Positives = 182/374 (48%), Gaps = 2/374 (0%)
 Frame = +3

Query: 6    LGRVDEAEAVFEEVKEGGLKPRTRAYNALLKGYVKVGALKDAEYIVSEMESSGVLPDEHT 185
            LGR ++    F   ++  L P T  YNAL+    +   L+ A  ++S M   G   D   
Sbjct: 189  LGRSEKLYEAFILSQKQTLTPLT--YNALIGACARNNDLEKALNLMSRMRQDGFQSDFIN 246

Query: 186  YSLLIDAYGNAGRWESARI--VLKEMEANGVKPNSYVFSRILASYRDRGEWQRSFQVLKE 359
            YSL+I +     + +   +  + +E+E++ ++ +  + + I+  +   G+  R+   L  
Sbjct: 247  YSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSM 306

Query: 360  MKNCGVHPDRQFYNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGH 539
            ++  G++P    +  +I   G +   +     FE MK  G++P    +N L+  + ++G 
Sbjct: 307  VQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGS 366

Query: 540  HNKAETLFEEMQEDGCLPCTTTYNIMINSFGRQERWDDVKELLGQMQSQGLLPNVVTYTT 719
              +AE++  EM++ G  P   TY ++++++    RW+  + LL QM+++ + PN   ++ 
Sbjct: 367  LKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSR 426

Query: 720  LVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRVMRGDG 899
            ++  Y   G +    E L  MK++ +KP    YN +I+ + +    + A+  +  M  +G
Sbjct: 427  ILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEG 486

Query: 900  LKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDNDLKPDVVTYTTLMKALIRVEKYEKVP 1079
            ++P ++  N+LI+   +      A  + + M++    P   TY  ++ +L   EK+++V 
Sbjct: 487  IEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVK 546

Query: 1080 AVFEEMLLSGCAPD 1121
             +  +M   G  P+
Sbjct: 547  ILLGKMQSQGLLPN 560



 Score = 84.0 bits (206), Expect = 1e-13
 Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 37/280 (13%)
 Frame = +3

Query: 396  YNVMIDTFGKYNCLDHMMTAFERMKVEGIEPDTVTWNTLIDCHCKQGHHNKAETLFEEMQ 575
            Y+++I   G+    + +  AF   + + + P  +T+N LI    +     KA  L   M+
Sbjct: 182  YSILIHALGRS---EKLYEAFILSQKQTLTP--LTYNALIGACARNNDLEKALNLMSRMR 236

Query: 576  EDGCLPCTTTYNIMINSFGR---------QERWDDVKE---------------------- 662
            +DG       Y+++I S  R         Q+ +++++                       
Sbjct: 237  QDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGD 296

Query: 663  ------LLGQMQSQGLLPNVVTYTTLVDIYGQSGRFHDAIECLEAMKSAGLKPSSTMYNA 824
                   L  +Q+ GL P   T+  ++   G  GR  +A    E MK  GLKP    +NA
Sbjct: 297  PNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNA 356

Query: 825  LINAYAQKGLSEQAVNAFRVMRGDGLKPSLLALNSLINAFGEDRRDSEAFAVLQYMRDND 1004
            L+  YA+KG  ++A +    M   GL P       L++A+    R   A  +L+ M   +
Sbjct: 357  LLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARN 416

Query: 1005 LKPDVVTYTTLMKALIRVEKYEKVPAVFEEMLLSGCAPDR 1124
            ++P+   ++ ++ +     +++K   V  EM  S   PDR
Sbjct: 417  VQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDR 456