BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00017325
         (1564 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   207   1e-50
gb|ACN32036.1| unknown [Zea mays]                                     204   1e-49
gb|ACL54615.1| unknown [Zea mays]                                     202   3e-49
emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]   196   2e-47
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]   194   1e-46
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   178   9e-46
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol...   178   9e-46
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]   187   1e-44
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ...   181   6e-43
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   181   1e-42
emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]   181   1e-42
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc...   180   1e-42
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-...   173   2e-40
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   172   3e-40
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   172   5e-40
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]                172   5e-40
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   171   6e-40
ref|NP_001041883.1| Os01g0123000 [Oryza sativa Japonica Group] g...   171   6e-40
gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subc...   162   7e-40
emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]   170   1e-39

>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  207 bits (527), Expect = 1e-50
 Identities = 136/389 (34%), Positives = 198/389 (50%), Gaps = 10/389 (2%)
 Frame = -2

Query: 1398 GNSAAEAIIQPQSQL---LTIKLGDNNYLIWKQQVWAAVNGYGLEGFLTGESIRPEKYTI 1228
            G S+  A I     L   L +KL   NY++W+ Q+   +   G E F+ G SI PEK   
Sbjct: 18   GQSSTMASIPSYQMLNHTLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSICPEK--- 74

Query: 1227 DTSGKKTTAINPAYVSWNRQDQXXXXXXXXXXSENVLISTVGLTTSKDIWEGLQIEFATR 1048
            D S      +NPA+V+W RQD+          +  ++   +G  TS   W  L+  F++ 
Sbjct: 75   DLS---PGVMNPAFVAWRRQDRTILSWIYSSLTPGIMAQIIGHNTSHSAWNALESIFSSS 131

Query: 1047 NTAKVMQFRLQLQTMKKGNMPMKDYLNKIKSCCDILNSAGEEISEKVQILYILGGLGPEY 868
            + A++MQ RL+LQ+ KKG+M M DY+ KIK   D L + GE +SE+ Q++ +LGGLG +Y
Sbjct: 132  SRARIMQLRLELQSTKKGSMSMIDYIMKIKGAADNLAAIGEPVSEQDQVMNLLGGLGSDY 191

Query: 867  DSVMVSITARAEPCSLREAQAILLSFENRLESYDNHGNTENSQFYVNLTTQSQVNTYRRG 688
            ++V+ +I  R +  SL    ++LL+FE+RLE       +   Q   N  + S      RG
Sbjct: 192  NAVVTAINIRDDKISLEAIHSMLLAFEHRLEQ-----QSSIEQMSANYASSSN----NRG 242

Query: 687  G---FNQAGRGRGSSQN----TRGGRSQGRTANYXXXXXXXXXXXXRCQICHYNNHTADK 529
            G   FN  GRG+G S N    T  GR +G                 +CQ+C    HTA  
Sbjct: 243  GGRKFN-GGRGQGYSPNNNNYTYRGRGRGGRNGQGGRQNSSPSEKPQCQLCGKFGHTAQI 301

Query: 528  CFYRLDMNFVPXXXXXXXXXXYTQQTGHNTNPSVHVASIGNSGNDIHQDMSDMSWYPDSG 349
            C++R D++F            ++   G+  N    VAS  N       + +D SWY DSG
Sbjct: 302  CYHRFDISF----QGGQTTISHSLNNGNQNNIPAMVASASN-------NPADESWYLDSG 350

Query: 348  ATNHVTYDLGNLNIASEYQGGDKVQLGNG 262
            A++H+T +LGNL   S Y G DKV +GNG
Sbjct: 351  ASHHLTQNLGNLTSTSPYTGTDKVTIGNG 379


>gb|ACN32036.1| unknown [Zea mays]
          Length = 376

 Score =  204 bits (518), Expect = 1e-49
 Identities = 132/407 (32%), Positives = 198/407 (48%), Gaps = 10/407 (2%)
 Frame = -2

Query: 1419 SHMTTAQGNSAAEAIIQPQ--SQLLTIKLGDNNYLIWKQQVWAAVNGYGLEGFLTGESIR 1246
            S M+T  G +A  + +     SQ++++KL   NYL+W  QV   +   GL G + G    
Sbjct: 2    STMSTVDGVAAVFSSMPTPAFSQMVSMKLNHENYLLWVAQVLPYLRSQGLSGHIDGSLPA 61

Query: 1245 PEKYTI----DTSGKKTTAINPAYVSWNRQDQXXXXXXXXXXSENVLISTVGLTTSKDIW 1078
            P +       + SG +T AINP + SW  QDQ          SE VL + V  TT++  W
Sbjct: 62   PRQTVAVDPAEGSGGRTIAINPEFTSWYHQDQLVLSVINSSLSEEVLATVVDATTARGAW 121

Query: 1077 EGLQIEFATRNTAKVMQFRLQLQTMKKGNMPMKDYLNKIKSCCDILNSAGEEISEKVQIL 898
              L+  +A+ + A++MQ R+QL T++KG++   +Y  K+K   D L + G+ + ++  I 
Sbjct: 122  STLERMYASSSRARIMQIRMQLATIQKGDLTAAEYFRKVKRLADTLAAVGKRLEDEEFIS 181

Query: 897  YILGGLGPEYDSVMVSITARAEPCSLREAQAILLSFENRLESYDNHGNTENSQFYVNLTT 718
            Y+L GL  +YDS++ SIT R +  ++ +  A LLSFE R E +   G         ++  
Sbjct: 182  YLLRGLPADYDSLVTSITTRPDTYTISDVYAHLLSFETRQEYHTAVGQIS------SVNN 235

Query: 717  QSQVNTYRRGGFNQAGR-GRGSSQNTRGGRSQ---GRTANYXXXXXXXXXXXXRCQICHY 550
             ++V +   G F Q GR GRG     RGGRSQ   G                  CQIC  
Sbjct: 236  ANRVPSRGGGAFGQNGRGGRG-----RGGRSQPGRGNNRPPARPPSNNSSSSGTCQICGK 290

Query: 549  NNHTADKCFYRLDMNFVPXXXXXXXXXXYTQQTGHNTNPSVHVASIGNSGNDIHQDMSDM 370
             NH A +C++R D  +                           +++  +    H+   D 
Sbjct: 291  GNHNALQCWHRFDQAYQAE------------------------STVKQAAAATHEYAVDP 326

Query: 369  SWYPDSGATNHVTYDLGNLNIASEYQGGDKVQLGNGSGPSHRGSTSQ 229
            +WY DSGAT+H+T DL  L     Y GGDK+Q+ NG+G SH  S+SQ
Sbjct: 327  NWYMDSGATDHITSDLERLTTRERYTGGDKIQVANGAGSSHEASSSQ 373


>gb|ACL54615.1| unknown [Zea mays]
          Length = 376

 Score =  202 bits (514), Expect = 3e-49
 Identities = 131/407 (32%), Positives = 197/407 (48%), Gaps = 10/407 (2%)
 Frame = -2

Query: 1419 SHMTTAQGNSAAEAIIQPQ--SQLLTIKLGDNNYLIWKQQVWAAVNGYGLEGFLTGESIR 1246
            S M+T  G +A  + +     SQ++++KL   NYL+W  QV   +   GL G + G    
Sbjct: 2    STMSTVDGVAAVFSSMPTPAFSQMVSMKLNHENYLLWVAQVLPYLRSQGLSGHIDGSLPA 61

Query: 1245 PEKYTI----DTSGKKTTAINPAYVSWNRQDQXXXXXXXXXXSENVLISTVGLTTSKDIW 1078
            P +       + SG +T AINP + SW  QDQ          SE VL + V  TT++  W
Sbjct: 62   PRQTVAVDPAEGSGGRTIAINPEFTSWYHQDQLVLSVINSSLSEEVLATVVDATTARGAW 121

Query: 1077 EGLQIEFATRNTAKVMQFRLQLQTMKKGNMPMKDYLNKIKSCCDILNSAGEEISEKVQIL 898
              L+  +A+ +  ++MQ R+QL T++KG++   +Y  K+K   D L + G+ + ++  I 
Sbjct: 122  STLERMYASSSRVRIMQIRMQLATIQKGDLTAAEYFRKVKRLADTLAAVGKRLEDEEFIS 181

Query: 897  YILGGLGPEYDSVMVSITARAEPCSLREAQAILLSFENRLESYDNHGNTENSQFYVNLTT 718
            Y+L GL  +YDS++ SIT R +  ++ +  A LLSFE R E +   G         ++  
Sbjct: 182  YLLRGLPADYDSLVTSITTRPDTYTISDVYAHLLSFETRQEYHTAVGQIS------SVNN 235

Query: 717  QSQVNTYRRGGFNQAGR-GRGSSQNTRGGRSQ---GRTANYXXXXXXXXXXXXRCQICHY 550
             ++V +   G F Q GR GRG     RGGRSQ   G                  CQIC  
Sbjct: 236  ANRVPSRGGGAFGQNGRGGRG-----RGGRSQPGRGNNRPPARPPSNNSSSSGTCQICGK 290

Query: 549  NNHTADKCFYRLDMNFVPXXXXXXXXXXYTQQTGHNTNPSVHVASIGNSGNDIHQDMSDM 370
             NH A +C++R D  +                           +++  +    H+   D 
Sbjct: 291  GNHNALQCWHRFDQAYQAE------------------------STVKQAAAATHEYAVDP 326

Query: 369  SWYPDSGATNHVTYDLGNLNIASEYQGGDKVQLGNGSGPSHRGSTSQ 229
            +WY DSGAT+H+T DL  L     Y GGDK+Q+ NG+G SH  S+SQ
Sbjct: 327  NWYMDSGATDHITSDLERLTTRERYTGGDKIQVANGAGSSHEASSSQ 373


>emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]
          Length = 2220

 Score =  196 bits (498), Expect = 2e-47
 Identities = 132/436 (30%), Positives = 211/436 (48%), Gaps = 19/436 (4%)
 Frame = -2

Query: 1512 RYFPTWYQSWLRPVSEPFLFSFLHLAF-YPLFSHMTTAQGNS------------AAEAII 1372
            ++FP   +     + E  L +F  L F YP+    +T   +S            A+    
Sbjct: 812  KWFPRSTECSTIEIDELSLRNFWALYFLYPIMDSASTQSSSSSGSIGSGQSTTMASHPSY 871

Query: 1371 QPQSQLLTIKLGDNNYLIWKQQVWAAVNGYGLEGFLTGESIRPEKYTIDTSGKKTTAINP 1192
            Q  +  L +KL   NY++WK Q+   V   G E F+ G SI P+K    +SG     INP
Sbjct: 872  QMLNHTLLVKLDRTNYILWKSQIDNVVFANGFEDFIDGFSICPDKEL--SSG----LINP 925

Query: 1191 AYVSWNRQDQXXXXXXXXXXSENVLISTVGLTTSKDIWEGLQIEFATRNTAKVMQFRLQL 1012
            A+V+W RQD+          +  ++   +G  +S   W  L+  F++ + A++MQ RL+L
Sbjct: 926  AFVAWRRQDRTILSWLYSSLTPAIMAQIIGHNSSHSAWNALEKTFSSSSRARIMQLRLEL 985

Query: 1011 QTMKKGNMPMKDYLNKIKSCCDILNSAGEEISEKVQILYILGGLGPEYDSVMVSITARAE 832
            Q+ KKG++ M DY+ K+K   D L + GE +SE+ Q++ +LGGLG +Y++V+ +I  R +
Sbjct: 986  QSTKKGSLSMIDYIMKVKGAADSLAAIGEPVSEQDQVMNLLGGLGSDYNAVVTAINIRDD 1045

Query: 831  PCSLREAQAILLSFENRLESYDNHGNTENSQFYVNLTTQSQVNTYRRGGFNQAGRGRGS- 655
              S+    ++LL+FE+RLE   +    + S    N  + S      RGG  +   GRG  
Sbjct: 1046 KISIEAVHSMLLAFEHRLEQQSS--IKQFSPISANYASSSN----NRGGGRRYNGGRGQN 1099

Query: 654  -----SQNTRGGRSQGRTANYXXXXXXXXXXXXRCQICHYNNHTADKCFYRLDMNFVPXX 490
                 S  T  G  +G                 +CQ+C    HT   C++R D+++    
Sbjct: 1100 HTPNISNYTYRGCGRGGRYGQNGRHNSNSSEKPQCQLCGKFGHTVQICYHRFDISY---- 1155

Query: 489  XXXXXXXXYTQQTGHNTNPSVHVASIGNSGNDIHQDMSDMSWYPDSGATNHVTYDLGNLN 310
                          +  NP+   A + +S N     ++D +WY DSGA++H+T  +GNL 
Sbjct: 1156 ---QSSQSSNTSPSNAGNPNSIPAMVASSNN-----LADDTWYLDSGASHHLTQSVGNLT 1207

Query: 309  IASEYQGGDKVQLGNG 262
             +S Y G DKV +GNG
Sbjct: 1208 SSSPYTGIDKVTIGNG 1223


>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score =  194 bits (492), Expect = 1e-46
 Identities = 126/399 (31%), Positives = 197/399 (49%), Gaps = 17/399 (4%)
 Frame = -2

Query: 1407 TAQGNSAAEAIIQPQSQLLT----IKLGDNNYLIWKQQVWAAVNGYGLEGFLTGESIRPE 1240
            +AQ +S A     P  Q+L     +KL   NY++W+ Q+   +   G E F+ G S  PE
Sbjct: 14   SAQSSSMASI---PSYQMLNYSLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSXCPE 70

Query: 1239 KYTIDTSGKKTTAINPAYVSWNRQDQXXXXXXXXXXSENVLISTVGLTTSKDIWEGLQIE 1060
            K        +   INPA+V+W RQD+          +  ++   +G  +S   W  L+  
Sbjct: 71   KEL------RPXEINPAFVAWRRQDRTILSWIYSSLTPGIMAQIIGHNSSHSAWNALEKI 124

Query: 1059 FATRNTAKVMQFRLQLQTMKKGNMPMKDYLNKIKSCCDILNSAGEEISEKVQILYILGGL 880
            F++ + A++MQ RL+ Q+ KKG+M M DY+ K+K   D L + GE +SE+ QI+ +LGGL
Sbjct: 125  FSSCSRARIMQLRLEFQSTKKGSMSMIDYIMKVKGAADSLAAIGEPVSEQDQIMNLLGGL 184

Query: 879  GPEYDSVMVSITARAEPCSLREAQAILLSFENRLESYDNHGNTENSQFYVNLTTQSQVNT 700
            G +Y++V+ +I  R +  SL    ++LL+FE RLE     G+ E       ++     ++
Sbjct: 185  GSDYNAVVTAINIREDKISLEAVHSMLLAFEQRLE---QQGSIEQ---LPAMSANYASSS 238

Query: 699  YRRGGFNQAGRGRG-----SSQNTRGGRSQGRTANYXXXXXXXXXXXXRCQICHYNNHTA 535
              RGG  +   GRG     ++ N R GR +G                 +CQ+C    HT 
Sbjct: 239  NNRGGGRKYNGGRGPNFMMTNSNFR-GRGRGGRYGQSGRQNSSSSERPQCQLCGKFGHTV 297

Query: 534  DKCFYRLDMNFVPXXXXXXXXXXYTQQTGHNTNPSVHVASIGNSGND--------IHQDM 379
              C++R D+ F              Q T +NT        + NSGN            ++
Sbjct: 298  QVCYHRFDITF--------------QSTQNNT------TGVSNSGNSNSMPAMVASSNNL 337

Query: 378  SDMSWYPDSGATNHVTYDLGNLNIASEYQGGDKVQLGNG 262
            +D +WY DSGA++H+T ++ NL  A+ Y G DKV +GNG
Sbjct: 338  ADDNWYLDSGASHHLTQNVANLTNATPYTGADKVTIGNG 376


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  178 bits (452), Expect(3) = 9e-46
 Identities = 117/360 (32%), Positives = 176/360 (48%), Gaps = 5/360 (1%)
 Frame = -2

Query: 1314 KQQVWAAVNGYGLEGFLTGESIRPEKYTIDTSGKKTTAINPAYVSWNRQDQXXXXXXXXX 1135
            K QV AA+ G  LEG+LTG +  P++ T+D  GKK+   NPA+  W  +DQ         
Sbjct: 5    KAQVRAAMRGARLEGYLTGATKMPDEETVDNKGKKSP--NPAFEEWEAKDQQILSYLLSS 62

Query: 1134 XSENVLISTVGLTTSKDIWEGLQIEFATRNTAKVMQFRLQLQTMKKGNMPMKDYLNKIKS 955
             S  V I      T+ + W  ++  FA++  A+ +  RL L T KKG+M + +Y  K+K 
Sbjct: 63   ISREVQIQVTSAKTAAEAWHSIEAMFASQTRARAVNLRLALSTTKKGSMTVAEYYTKMKG 122

Query: 954  CCDILNSAGEEISEKVQILYILGGLGPEYDSVMVSITARAEPCSLREAQAILLSFENRLE 775
              D + +AG  + ++  + YIL GL  E+  ++ ++  R +P SL +  + LL+FE +L+
Sbjct: 123  YGDEMAAAGRPLQDEEMVEYILTGLEEEFLPMVSALVTRVDPISLEDLYSQLLNFETKLD 182

Query: 774  SYDNHGNTENSQFYVNLTTQSQVNTYR--RGGFNQAGRGRGSSQNTRGGRSQGRTAN--- 610
                 G  E  Q   N+  +      R   GG  Q G GRGSS+  R   S GR +N   
Sbjct: 183  LM--RGGGEQHQGSANMAGRGGRGNQRGGSGGRGQRG-GRGSSRGGRASWSGGRQSNQGG 239

Query: 609  YXXXXXXXXXXXXRCQICHYNNHTADKCFYRLDMNFVPXXXXXXXXXXYTQQTGHNTNPS 430
            Y             CQ+C    HTA +C++R + +FVP            +  G  TN S
Sbjct: 240  YIRRSNNSSDERPVCQVCFKKGHTAARCWHRFEEDFVP----------DEKLAGAATN-S 288

Query: 429  VHVASIGNSGNDIHQDMSDMSWYPDSGATNHVTYDLGNLNIASEYQGGDKVQLGNGSGPS 250
             HV               D +WY D+GAT+H+T +L  L+I  +Y GGD++   +GS  S
Sbjct: 289  YHV---------------DTNWYTDTGATDHITGELEKLSIREKYAGGDQIHTASGSDNS 333



 Score = 31.6 bits (70), Expect(3) = 9e-46
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = -1

Query: 88  KHSLVVWHNRLGHPSMDIVKR 26
           K S+  WHNRLGHPS  IV++
Sbjct: 380 KPSMSRWHNRLGHPSSFIVRQ 400



 Score = 23.1 bits (48), Expect(3) = 9e-46
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 275 NLGMVQDQATGGVLLRGTLKDGLY 204
           N  +++D+ T  +LL+G    GLY
Sbjct: 341 NFFVIKDKDTKNILLKGRCHKGLY 364


>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 969

 Score =  178 bits (452), Expect(3) = 9e-46
 Identities = 117/360 (32%), Positives = 176/360 (48%), Gaps = 5/360 (1%)
 Frame = -2

Query: 1314 KQQVWAAVNGYGLEGFLTGESIRPEKYTIDTSGKKTTAINPAYVSWNRQDQXXXXXXXXX 1135
            K QV AA+ G  LEG+LTG +  P++ T+D  GKK+   NPA+  W  +DQ         
Sbjct: 5    KAQVRAAMRGARLEGYLTGATKMPDEETVDNKGKKSP--NPAFEEWEAKDQQILSYLLSS 62

Query: 1134 XSENVLISTVGLTTSKDIWEGLQIEFATRNTAKVMQFRLQLQTMKKGNMPMKDYLNKIKS 955
             S  V I      T+ + W  ++  FA++  A+ +  RL L T KKG+M + +Y  K+K 
Sbjct: 63   ISREVQIQVTSAKTAAEAWHSIEAMFASQTRARAVNLRLALSTTKKGSMTVAEYYTKMKG 122

Query: 954  CCDILNSAGEEISEKVQILYILGGLGPEYDSVMVSITARAEPCSLREAQAILLSFENRLE 775
              D + +AG  + ++  + YIL GL  E+  ++ ++  R +P SL +  + LL+FE +L+
Sbjct: 123  YGDEMAAAGRPLQDEEMVEYILTGLEEEFLPMVSALVTRVDPISLEDLYSQLLNFETKLD 182

Query: 774  SYDNHGNTENSQFYVNLTTQSQVNTYR--RGGFNQAGRGRGSSQNTRGGRSQGRTAN--- 610
                 G  E  Q   N+  +      R   GG  Q G GRGSS+  R   S GR +N   
Sbjct: 183  LM--RGGGEQHQGSANMAGRGGRGNQRGGSGGRGQRG-GRGSSRGGRASWSGGRQSNQGG 239

Query: 609  YXXXXXXXXXXXXRCQICHYNNHTADKCFYRLDMNFVPXXXXXXXXXXYTQQTGHNTNPS 430
            Y             CQ+C    HTA +C++R + +FVP            +  G  TN S
Sbjct: 240  YIRRSNNSSDERPVCQVCFKKGHTAARCWHRFEEDFVP----------DEKLAGAATN-S 288

Query: 429  VHVASIGNSGNDIHQDMSDMSWYPDSGATNHVTYDLGNLNIASEYQGGDKVQLGNGSGPS 250
             HV               D +WY D+GAT+H+T +L  L+I  +Y GGD++   +GS  S
Sbjct: 289  YHV---------------DTNWYTDTGATDHITGELEKLSIREKYAGGDQIHTASGSDNS 333



 Score = 31.6 bits (70), Expect(3) = 9e-46
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = -1

Query: 88  KHSLVVWHNRLGHPSMDIVKR 26
           K S+  WHNRLGHPS  IV++
Sbjct: 380 KPSMSRWHNRLGHPSSFIVRQ 400



 Score = 23.1 bits (48), Expect(3) = 9e-46
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 275 NLGMVQDQATGGVLLRGTLKDGLY 204
           N  +++D+ T  +LL+G    GLY
Sbjct: 341 NFFVIKDKDTKNILLKGRCHKGLY 364


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score =  187 bits (475), Expect = 1e-44
 Identities = 126/400 (31%), Positives = 194/400 (48%), Gaps = 18/400 (4%)
 Frame = -2

Query: 1407 TAQGNSAAEAIIQPQSQLLT----IKLGDNNYLIWKQQVWAAVNGYGLEGFLTGESIRPE 1240
            +AQ +S A     P  Q+L     +KL   NY++W+ Q+   +   G E F+ G S+ PE
Sbjct: 14   SAQSSSMASI---PSYQMLNYSLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSVCPE 70

Query: 1239 KYTIDTSGKKTTAINPAYVSWNRQDQXXXXXXXXXXSENVLISTVGLTTSKDIWEGLQIE 1060
            K        +   INPA+V+  RQD+          +  ++   +G  +S   W  L+  
Sbjct: 71   KEL------RPGEINPAFVAXRRQDRTILSWIYSSLTPGIMAQIIGHNSSHSAWNALEKI 124

Query: 1059 FATRNTAKVMQFRLQLQTMKKGNMPMKDYLNKIKSCCDILNSAGEEISEKVQILYILGGL 880
            F++ + A++MQ  L+ Q+ KKG+M M DY+ K+K   D L + GE +SE+ QI+ +LGGL
Sbjct: 125  FSSCSRARIMQLXLEFQSTKKGSMSMIDYIMKVKGAADSLAAIGEPVSEQDQIMNLLGGL 184

Query: 879  GPEYDSVMVSITARAEPCSLREAQAILLSFENRLESYDNHGNTEN-SQFYVNLTTQSQVN 703
            G +Y++V+ +I  R +  SL    ++LL+FE RLE     G+ E       N  + S   
Sbjct: 185  GSDYNAVVTAINIREDKISLEAVHSMLLAFEQRLE---QQGSIEQLPAMSANYASXSN-- 239

Query: 702  TYRRGGFNQAGRGRG-----SSQNTRGGRSQGRTANYXXXXXXXXXXXXRCQICHYNNHT 538
               RGG  +   GRG     ++ N R GR +G                 +CQ+C    HT
Sbjct: 240  --NRGGGRKYNGGRGPNFMMTNSNFR-GRGRGXRYGQSGRQNSSSSERPQCQLCGKFGHT 296

Query: 537  ADKCFYRLDMNFVPXXXXXXXXXXYTQQTGHNTNPSVHVASIGNSGND--------IHQD 382
               C++R D+ F              Q T +NT        + NSGN            +
Sbjct: 297  VQVCYHRFDITF--------------QSTQNNT------TGVSNSGNSNXMPAMVAXSNN 336

Query: 381  MSDMSWYPDSGATNHVTYDLGNLNIASEYQGGDKVQLGNG 262
             +D +WY DSGA++H+T ++ NL  A+ Y G DKV +GNG
Sbjct: 337  XADDNWYLDSGASHHLTQNVANLTNATPYTGADKVTIGNG 376


>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
          Length = 646

 Score =  181 bits (460), Expect = 6e-43
 Identities = 121/386 (31%), Positives = 184/386 (47%), Gaps = 18/386 (4%)
 Frame = -2

Query: 1359 QLLTIKLGDNNYLIWKQQVWAAVNGYGLEGFLTGESIRPEKYTIDTSGKKTT----AINP 1192
            Q LTIKL  NN+LIW+ Q+   V   G E  L G    P ++   T    TT     +NP
Sbjct: 43   QTLTIKLDRNNFLIWRNQLLNIVVANGYEDILEGTRSCPYQWIAVTDTASTTHGSVILNP 102

Query: 1191 AYVSWNRQDQXXXXXXXXXXSENVLISTVGLTTSKDIWEGLQIEFATRNTAKVMQFRLQL 1012
             YV W RQ++          +E ++   +   ++ +IW  L+  +A+ + A++M+ RLQL
Sbjct: 103  EYVLWQRQNRLVMSWIYSSLTEQMMTQIMAYNSACEIWTALRESYASASRARIMELRLQL 162

Query: 1011 QTMKKGNMPMKDYLNKIKSCCDILNSAGEEISEKVQILYILGGLGPEYDSVMVSITARAE 832
            QT +KG + + DY+ +I+  CD L + GE +S   Q++ +L GLG EY+ ++ SIT+R +
Sbjct: 163  QTTRKGGLSVMDYMLRIQHICDHLRAIGESVSIDDQVMAVLAGLGSEYNPIVASITSRLD 222

Query: 831  PCSLREAQAILLSFENRLE---SYDNH-----------GNTENSQFYVNLTTQSQVNTYR 694
              S++  Q+ L ++E RLE   S + H            N    + Y      SQ     
Sbjct: 223  SISVQALQSYLETYEKRLEIQNSVEQHIPLQANAAMYNSNRGKRKPYQQNFHHSQTPVTA 282

Query: 693  RGGFNQAGRGRGSSQNTRGGRSQGRTANYXXXXXXXXXXXXRCQICHYNNHTADKCFYRL 514
               FN     +G     RGG S    AN             +CQIC    H A +C++R 
Sbjct: 283  THNFNHRNSSQG---GFRGGHSNKGRAN--------PGSRPQCQICCKIGHVATECWHRF 331

Query: 513  DMNFVPXXXXXXXXXXYTQQTGHNTNPSVHVASIGNSGNDIHQDMSDMSWYPDSGATNHV 334
            D  F P            Q +    +P   +A+ G  G        +  W+ D+GAT+HV
Sbjct: 332  DNQFQP------KASHSNQFSSSAQDPQALMAAPGLLG--------ETPWFLDTGATHHV 377

Query: 333  TYDLGNLNIASEYQGGDKVQLGNGSG 256
            T DL NL++ + + G DKV +GNG G
Sbjct: 378  TSDLANLSLHNPFSGDDKVIVGNGKG 403


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  181 bits (458), Expect = 1e-42
 Identities = 111/365 (30%), Positives = 176/365 (48%), Gaps = 2/365 (0%)
 Frame = -2

Query: 1344 KLGDNNYLIWKQQVWAAVNGYGLEGFLTGESIRPEKYTIDTSGKKTTAINPAYVSWNRQD 1165
            KL   NYL+WK QV  A+    L+  LTG  I P K   D S +  T  NPAY  W  +D
Sbjct: 23   KLTKGNYLLWKAQVLPAIRAAQLDDILTGVEICPPKTISDASDRTVTVANPAYGRWIARD 82

Query: 1164 QXXXXXXXXXXSENVLISTVGLTTSKDIWEGLQIEFATRNTAKVMQFRLQLQTMKKGNMP 985
            Q          S  VL S V  +TS  +W  L   +++ + A+ +  R+ L T KKG   
Sbjct: 83   QAVLGYLLSSLSREVLSSVVNCSTSASVWTTLSEMYSSHSRARKVNTRIALATTKKGASS 142

Query: 984  MKDYLNKIKSCCDILNSAGEEISEKVQILYILGGLGPEYDSVMVSITARAEPCSLREAQA 805
            + +Y  K++   D L +AG+ + ++  + ++L GL  +++ ++ ++ AR++P +  +   
Sbjct: 143  VAEYFAKMRGFADELGAAGKPLDDEEFVSFLLTGLDEDFNPLVTAVVARSDPITPGDLYT 202

Query: 804  ILLSFENRLESYDNHGNTENSQFYVNLTTQSQVNTYRRGGFN--QAGRGRGSSQNTRGGR 631
             LLS+ENR+  +   G++   Q   N  +  +  ++ R G      GRGRG   +  G +
Sbjct: 203  QLLSYENRM--HLQTGSSSLMQSSANARSPGRGMSWGRSGGRGFSRGRGRGRGPSRGGFQ 260

Query: 630  SQGRTANYXXXXXXXXXXXXRCQICHYNNHTADKCFYRLDMNFVPXXXXXXXXXXYTQQT 451
            S GR  NY            RCQ+C    HTA  C+YR D N+VP               
Sbjct: 261  SFGRGNNYSGATDADTSSRPRCQVCSRVGHTALNCWYRFDENYVPDQR------------ 308

Query: 450  GHNTNPSVHVASIGNSGNDIHQDMSDMSWYPDSGATNHVTYDLGNLNIASEYQGGDKVQL 271
                          ++ +  HQ+ S++ WY D+GAT+H+T DL  L +  +Y G D++  
Sbjct: 309  --------------SANSAAHQNGSNVPWYTDTGATDHITGDLDRLTMHDKYTGTDQIIA 354

Query: 270  GNGSG 256
             NG+G
Sbjct: 355  ANGTG 359


>emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]
          Length = 1282

 Score =  181 bits (458), Expect = 1e-42
 Identities = 115/380 (30%), Positives = 186/380 (48%), Gaps = 5/380 (1%)
 Frame = -2

Query: 1389 AAEAIIQPQSQLLTIKLGDNNYLIWKQQVWAAVNGYGLEGFLTGESIRPEKYTIDTSGKK 1210
            A+    Q  +  L +KL   NY++WK Q+   V   G E F+ G SI P+K         
Sbjct: 21   ASHXSYQMLNHTLPVKLDRTNYILWKSQIDNVVFANGFEDFIDGSSICPDKELX------ 74

Query: 1209 TTAINPAYVSWNRQDQXXXXXXXXXXSENVLISTVGLTTSKDIWEGLQIEFATRNTAKVM 1030
            +  INPA+V+W RQD+          +   +   +G  +    W  L+  F++ + A++M
Sbjct: 75   SGLINPAFVAWRRQDRTILSWLYSSLTPAXMAQIIGHNSXHSAWNALEKTFSSSSRARIM 134

Query: 1029 QFRLQLQTMKKGNMPMKDYLNKIKSCCDILNSAGEEISEKVQILYILGGLGPEYDSVMVS 850
            Q RL+LQ+ KKG+  M DY+ K+K   D L + GE +SE+ Q++ +L GLG +Y++V+ +
Sbjct: 135  QLRLELQSTKKGSXSMIDYIMKVKGAADSLAAIGEPVSEQDQVMNLLDGLGSDYNAVVTA 194

Query: 849  ITARAEPCSLREAQAILLSFENRLESYDNHGNTENSQFY-VNLTTQSQVNTYRRGGFNQA 673
            I  R +  S+    ++LL FE+RLE       +   QF  ++    S  N+   G     
Sbjct: 195  INIRDDKISIEAVHSMLLVFEHRLEQ-----QSSIEQFSPISANYASSSNSRGGGRRYNG 249

Query: 672  GRGRGSSQNTRG--GRSQGRTANY--XXXXXXXXXXXXRCQICHYNNHTADKCFYRLDMN 505
            GRG+  + NT     R  GR   Y              +CQ+C    +T   C++R D++
Sbjct: 250  GRGQNHTPNTSNYTYRGSGRGGRYGQNERHNSNSSEKPQCQLCGKFGYTVQICYHRFDIS 309

Query: 504  FVPXXXXXXXXXXYTQQTGHNTNPSVHVASIGNSGNDIHQDMSDMSWYPDSGATNHVTYD 325
            +                  + +NP+   A + +S       ++D +WY DSGA++H+T  
Sbjct: 310  Y-------QSSQSSNTSPSNASNPNSIPAMVASSNY-----LADDTWYLDSGASHHLTQS 357

Query: 324  LGNLNIASEYQGGDKVQLGN 265
            +GNL  +S Y G DKV +GN
Sbjct: 358  VGNLTSSSPYTGTDKVTIGN 377


>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1145

 Score =  180 bits (457), Expect = 1e-42
 Identities = 120/393 (30%), Positives = 183/393 (46%), Gaps = 8/393 (2%)
 Frame = -2

Query: 1404 AQGNSAAEAIIQP-QSQLLTIKLGDNNYLIWKQQVWAAVNGYGLEGFLTGESIRPE-KYT 1231
            A  +S+    + P Q   ++ KLG NNY +WK Q+ AAV G  L+G LTG S +PE + T
Sbjct: 2    ASSSSSPTTSVNPFQGHTVSEKLGKNNYALWKVQICAAVRGARLQGHLTGASEKPEAEVT 61

Query: 1230 IDTSGKKTTAINPAYVSWNRQDQXXXXXXXXXXSENVLISTVGLTTSKDIWEGLQIEFAT 1051
            +   GK T   NPA+  W   DQ          S +VL+      T+ ++W  ++  ++ 
Sbjct: 62   VTADGKSTKKANPAFEDWEALDQQVLGYLLSSLSRDVLMQVAACETAAEVWATIERMYSM 121

Query: 1050 RNTAKVMQFRLQLQTMKKGNMPMKDYLNKIKSCCD-ILNSAGEEISEKVQILYILGGLGP 874
               A+ M  R  L   KKGNM + ++  K+K+  D +  S G  + E+  I +I+ GLG 
Sbjct: 122  HTRARTMNTRFALTNTKKGNMTLPEFFGKMKALGDEMAASTGRPVDEEEMIQHIIAGLGE 181

Query: 873  EYDSVMVSITARAEPCSLREAQAILLSFENRLESYDNHGNTENSQFYVNLTTQSQ--VNT 700
             Y  V+  + AR EP ++ +  + +++FE R+  Y   G  E     VNL  +S    N 
Sbjct: 182  GYSKVISVVCARPEPMTVSDLYSQVVNFEGRMALY--RGTQEG---VVNLANRSSGGNNG 236

Query: 699  YRRGGFNQAGRG---RGSSQNTRGGRSQGRTANYXXXXXXXXXXXXRCQICHYNNHTADK 529
              RGG+   G G   RG  +   GGR +GR                 CQ+C    HTA  
Sbjct: 237  GGRGGYTNRGSGGAPRGRGRGNGGGRGRGRAPG-------GPDRKPTCQVCFKRGHTATD 289

Query: 528  CFYRLDMNFVPXXXXXXXXXXYTQQTGHNTNPSVHVASIGNSGNDIHQDMSDMSWYPDSG 349
            C+YR D ++VP                       HVA+   S +       D +WY D+G
Sbjct: 290  CWYRYDEDYVP--------------------DDKHVAAATASSS----YGVDTNWYIDTG 325

Query: 348  ATNHVTYDLGNLNIASEYQGGDKVQLGNGSGPS 250
            AT+H+T +L  L    +Y G +++   +G+  S
Sbjct: 326  ATDHITGELEKLTTKDKYNGNEQIHTASGADSS 358


>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  173 bits (439), Expect = 2e-40
 Identities = 121/407 (29%), Positives = 183/407 (44%), Gaps = 18/407 (4%)
 Frame = -2

Query: 1422 FSHMTTAQGNSAAEAIIQP-QSQLLTIKLGDNNYLIWKQQVWAAVNGYGLEGFLTGESIR 1246
            F   +    +S++ A   P Q   ++ KLG  N+ +WK QV AAV G  L+G LTG + R
Sbjct: 80   FPKRSILMASSSSTAATNPFQGHPISEKLGKANHALWKVQVSAAVRGARLQGHLTGATKR 139

Query: 1245 PE-KYTIDTSGKKTTAINPAYVSWNRQDQXXXXXXXXXXSENVLISTVGLTTSKDIWEGL 1069
            P  +  +   G      NPA+  W   DQ          +  VL+      T+ ++W  +
Sbjct: 140  PPAEIAVTKDGATKKEPNPAHEDWEATDQQVLGYLLSSLTREVLMQVATCDTAAEVWSAI 199

Query: 1068 QIEFATRNTAKVMQFRLQLQTMKKGNMPMKDYLNKIKSCCDILNSA-GEEISEKVQILYI 892
            +  ++T   A+ +  R  L   KKGNM   +Y  K+KS  D + +A G  I E+  I YI
Sbjct: 200  EQMYSTHTRARAINTRFALTNTKKGNMSTPEYFAKMKSLGDEMATAGGRPIDEEELIQYI 259

Query: 891  LGGLGPEYDSVMVSITARAEPCSLREAQAILLSFENRLESYDNHGNTENSQFYVNLTTQS 712
            + GLG  Y  V+ ++ AR EP S+ +  + +L+FE R   Y                 + 
Sbjct: 260  ITGLGEGYSEVVSAVCARVEPISVSDLYSQVLNFEARQAIYRG-------------AQEV 306

Query: 711  QVNTYRRGGFNQAGR-----GRGSSQ----------NTRGGRSQGRTANYXXXXXXXXXX 577
             VN   RGGF+  GR     G+G S+          N  GGR +GRT             
Sbjct: 307  TVNVANRGGFSHGGRGNSNGGQGGSRGGGGGGHGRGNGGGGRGRGRTPG-------GVDK 359

Query: 576  XXRCQICHYNNHTADKCFYRLDMNFVPXXXXXXXXXXYTQQTGHNTNPSVHVASIGNSGN 397
               CQ+C    HTA  C+YR D ++VP                     + HVA+   +  
Sbjct: 360  RPICQVCFKRGHTAADCWYRYDEDYVP--------------------DAKHVAAAAVNSY 399

Query: 396  DIHQDMSDMSWYPDSGATNHVTYDLGNLNIASEYQGGDKVQLGNGSG 256
             +     D +WY D+GAT+HVT +L  L +  +Y GG+++   +G+G
Sbjct: 400  GV-----DTNWYIDTGATDHVTGELDKLTMKEKYNGGEQIHTASGAG 441


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  172 bits (437), Expect = 3e-40
 Identities = 115/395 (29%), Positives = 184/395 (46%), Gaps = 3/395 (0%)
 Frame = -2

Query: 1410 TTAQGNSAAEAIIQPQSQLLTIKLGDNNYLIWKQQVWAAVNGYGLEGFLTGESIRPEKYT 1231
            ++++ N+    + QP S+    KLG +N+ +WK Q+ A + G  LEG LTG+   P    
Sbjct: 3    SSSKNNTGNPLVGQPVSE----KLGKSNHAVWKAQILATIRGARLEGHLTGDDQPPAPIL 58

Query: 1230 IDTSGKKTTAI-NPAYVSWNRQDQXXXXXXXXXXSENVLISTVGLTTSKDIWEGLQIEFA 1054
                G+K   + NP Y  W   DQ          ++++L+      T+   W  +Q  F 
Sbjct: 59   RRKEGEKEVVVSNPEYEEWVATDQQVLAYLLSSMTKDLLVQVATCRTAASAWSMIQGMFG 118

Query: 1053 TRNTAKVMQFRLQLQTMKKGNMPMKDYLNKIKSCCDILNSAGEEISEKVQILYILGGLGP 874
            +   A+ +  RL L T++KG+M +  Y+ K+++  D L + G+ + +   I YI  GL  
Sbjct: 119  SMTRARTINTRLSLSTLQKGDMNITTYVGKMRALADDLMAVGKPVDDDELIGYIFAGLDD 178

Query: 873  EYDSVMVSITARAEPCSLREAQAILLSFENRLESYDNHGNTENSQFYVNLTTQSQVNTYR 694
            E++ V+ +I  R +P ++ E  A L+SFE RL ++   G+  +         Q Q    R
Sbjct: 179  EFEPVISTIVGRPDPVTIGETYAQLISFEQRL-AHRRSGDQSSVNSASRSRGQPQRGGSR 237

Query: 693  RGGFNQAGRGRGSSQNTRGGRSQGRTANYXXXXXXXXXXXXRCQICHYNNHTADKCFYRL 514
             GG +  GRG  S+   R GR +G  +              +CQ+C+   HT   C+YR 
Sbjct: 238  SGGDSNRGRGAPSNGANR-GRGRGNPSGGRANVGGGTDNRPKCQLCYKRGHTVCDCWYRY 296

Query: 513  DMNFVPXXXXXXXXXXYTQQTGHNTNPSVHVASIGNSGNDIHQDMSDMSWYPDSGATNHV 334
            D NFVP             +    T  S  V               D +WY D+GAT+HV
Sbjct: 297  DENFVP------------DERFAGTAVSYGV---------------DTNWYLDTGATDHV 329

Query: 333  TYDLGNLNIASEYQGGDKVQLGNGSGP--SHRGST 235
            T +L  L +  +Y G D+V   +G+G   SH G++
Sbjct: 330  TGELDKLTVRDKYHGNDQVHTASGAGMEISHIGNS 364


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  172 bits (435), Expect = 5e-40
 Identities = 117/392 (29%), Positives = 177/392 (45%), Gaps = 12/392 (3%)
 Frame = -2

Query: 1395 NSAAEAIIQP-QSQLLTIKLGDNNYLIWKQQVWAAVNGYGLEGFLTGESIRPE-KYTIDT 1222
            +S++ A   P Q   ++ KLG  N+ +WK QV AAV G  L+G LTG + RP  +  +  
Sbjct: 3    SSSSTAATNPFQGHPISEKLGKANHALWKVQVSAAVRGARLQGHLTGATKRPPAEIAVTK 62

Query: 1221 SGKKTTAINPAYVSWNRQDQXXXXXXXXXXSENVLISTVGLTTSKDIWEGLQIEFATRNT 1042
             G      NPA+  W   DQ          +  VL+      T+ ++W  ++  ++T   
Sbjct: 63   DGATKKEPNPAHEDWEATDQQVLGYLLSSLTREVLMQVATCDTAAEVWSAIEQMYSTHTR 122

Query: 1041 AKVMQFRLQLQTMKKGNMPMKDYLNKIKSCCDILNSA-GEEISEKVQILYILGGLGPEYD 865
            A+ +  R  L   KKGNM   +Y  K+KS  D + +A G  I E+  I YI+ GLG  Y 
Sbjct: 123  ARAINTRFALTNTKKGNMSTPEYFAKMKSLGDEMATAGGRPIDEEELIQYIITGLGEGYS 182

Query: 864  SVMVSITARAEPCSLREAQAILLSFENRLESYDNHGNTENSQFYVNLTTQSQVNTYRRGG 685
             V+ ++ AR EP S+ +  + +L+FE R   Y                 +  VN   RGG
Sbjct: 183  EVVSAVCARVEPISVSDLYSQVLNFEARQAIYRG-------------AQEVTVNVANRGG 229

Query: 684  FNQAGRG--RGSSQNTRG-------GRSQGRTANYXXXXXXXXXXXXRCQICHYNNHTAD 532
            F+  GRG   G    +RG       GR  G   +              CQ+C    HTA 
Sbjct: 230  FSHGGRGNSNGGQGGSRGGGGGGGHGRGNGGGGHGRGRTPGGVDKRPICQVCFKRGHTAA 289

Query: 531  KCFYRLDMNFVPXXXXXXXXXXYTQQTGHNTNPSVHVASIGNSGNDIHQDMSDMSWYPDS 352
             C+YR D ++VP                     + HVA+   +   +     D +WY D+
Sbjct: 290  DCWYRYDEDYVP--------------------DAKHVAAAAVNSYGV-----DTNWYIDT 324

Query: 351  GATNHVTYDLGNLNIASEYQGGDKVQLGNGSG 256
            GAT+HVT +L  L +  +Y GG+++   +G+G
Sbjct: 325  GATDHVTGELDKLTMKEKYNGGEQIHTASGAG 356


>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
          Length = 1825

 Score =  172 bits (435), Expect = 5e-40
 Identities = 110/368 (29%), Positives = 171/368 (46%), Gaps = 2/368 (0%)
 Frame = -2

Query: 1353 LTIKLGDNNYLIWKQQVWAAVNGYGLEGFLTGES-IRPEKYTIDTSGKKTTAINPAYVSW 1177
            +T KL   N+ +W  QV  A+ G  LEG + G++   P + T    GK+    NP Y  W
Sbjct: 156  VTEKLSKANHGLWVAQVLTAIRGARLEGHINGKNPAPPAEITKTVDGKEVKTSNPNYDEW 215

Query: 1176 NRQDQXXXXXXXXXXSENVLISTVGLTTSKDIWEGLQIEFATRNTAKVMQFRLQLQTMKK 997
               DQ          +   L+    + T+ + W+ L   F +R  A+ +  RL L T++K
Sbjct: 216  FAADQQILGFLFSSLTRETLLQVAAVKTAAEAWKTLDDMFTSRTRARSLNVRLALTTLQK 275

Query: 996  GNMPMKDYLNKIKSCCDILNSAGEEISEKVQILYILGGLGPEYDSVMVSITARAEPCSLR 817
            GN  + +Y+ K+K+  D + +AG+ + ++  I YIL GL  ++DSV+ +I  R EP ++ 
Sbjct: 276  GNSSISEYIGKMKTLADEVAAAGKPLDDEELIAYILNGLDEDFDSVVSTIVGRVEPVTVA 335

Query: 816  EAQAILLSFENRLESYDNHGNTENSQFYVNLTTQ-SQVNTYRRGGFNQAGRGRGSSQNTR 640
            E  + LLSFENRL           +Q   N+  +  +     RGG    GRGRG+++   
Sbjct: 336  EVYSQLLSFENRLA-------MRQAQATANMANRGGRGGGGSRGGGANPGRGRGATRGRG 388

Query: 639  GGRSQGRTANYXXXXXXXXXXXXRCQICHYNNHTADKCFYRLDMNFVPXXXXXXXXXXYT 460
                +GR  N              CQ+C+   H A  C++R D +FVP            
Sbjct: 389  AAPGRGRGNN---QQQRSYDNRPLCQVCYKRGHVAADCWHRFDEDFVPDDKL-------- 437

Query: 459  QQTGHNTNPSVHVASIGNSGNDIHQDMSDMSWYPDSGATNHVTYDLGNLNIASEYQGGDK 280
                        VA+       IH    D +WY D+GAT+H+T +L  L     Y+G D+
Sbjct: 438  ------------VAAA------IHTHARDSNWYVDTGATDHITSELEKLTARDVYKGHDQ 479

Query: 279  VQLGNGSG 256
            +   +GSG
Sbjct: 480  IHTASGSG 487


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  171 bits (434), Expect = 6e-40
 Identities = 112/402 (27%), Positives = 189/402 (47%), Gaps = 27/402 (6%)
 Frame = -2

Query: 1344 KLGDNNYLIWKQQVWAAVNGYGLEGFLTGESIRPEKYTIDTSGKKTTAINPAYVSWNRQD 1165
            KL ++N+L+ ++Q+   + G+ L+ FL+  S+ P ++ + +  +    +NP +  W +Q 
Sbjct: 22   KLDNHNFLVXRKQILTTLRGHKLQHFLSETSVLPSEF-LSSDDETQNHVNPKFQDWEQQX 80

Query: 1164 QXXXXXXXXXXSENVLISTVGLTTSKDIWEGLQIEFATRNTAKVMQFRLQLQTMKKGNMP 985
            Q          ++ +L   V   TS  +W+ L++ FAT+  AKV QF+ QL   KKG++ 
Sbjct: 81   QLIMSXLLASITDALLTRMVNCDTSAQVWKTLELYFATQVRAKVTQFKTQLHNTKKGDLS 140

Query: 984  MKDYLNKIKSCCDILNSAGEEISEKVQILYILGGLGPEYDSVMVSITARAEPCSLREAQA 805
            + DYL KI++  D+L   G +IS K  I  I  GL  +Y++ ++S+ +R +P ++ E +A
Sbjct: 141  ISDYLLKIRNVVDLLALVGHKISVKDHIBAIFEGLPQDYETFIISVNSRLDPYTVEEIEA 200

Query: 804  ILLSFENRLES-------------------------YDNHGNTENSQFYVNLTTQSQVNT 700
            +LL+ E+R+E                          ++   +T NS F     + + +  
Sbjct: 201  LLLAQESRIEKNIKIADFSTPSLAHLITTNRNGSPHFNYRASTRNSNFRPPTHSGNGMQH 260

Query: 699  YRRGGFNQAGRGRGSSQNTRGGRSQGRTANYXXXXXXXXXXXXRCQICHYNNHTADKCFY 520
            + RG F Q GRGR    + +G                      +CQ+C    H   +C+Y
Sbjct: 261  F-RGNFTQQGRGRHGRGSWKGNNK------------------PQCQLCGRIGHVVMQCYY 301

Query: 519  RLDMNFVPXXXXXXXXXXYTQQTGHNTNPSVHVASIGNSGNDIHQDMSDMSWYPDSGATN 340
            R D +F                  H            +      + + D +WYPDSGAT+
Sbjct: 302  RFDQSFTGPSQLQGNRPQGNMAHLHQQLSEXFFPGTPSVKPTTAEIIQDNNWYPDSGATH 361

Query: 339  HVTYDLGNLNIASEYQGGDKVQLGNGSG-PSHR-GSTSQGNS 220
            H+T +L NL   S++   D+V +GNG G P H  G TS  +S
Sbjct: 362  HLTPNLNNLLTKSQFPSSDEVFVGNGKGLPIHHIGHTSFSSS 403


>ref|NP_001041883.1| Os01g0123000 [Oryza sativa Japonica Group]
            gi|113531414|dbj|BAF03797.1| Os01g0123000 [Oryza sativa
            Japonica Group] gi|215741345|dbj|BAG97840.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 360

 Score =  171 bits (434), Expect = 6e-40
 Identities = 112/377 (29%), Positives = 168/377 (44%), Gaps = 6/377 (1%)
 Frame = -2

Query: 1344 KLGDNNYLIWKQQVWAAVNGYGLEGFLTGESIRP-----EKYTIDTSGKKTTAI-NPAYV 1183
            KL   NY +W  QV  A+ G  LEGF++G++  P     +K      G+KT  I NPA  
Sbjct: 22   KLTKQNYALWSAQVLTALRGARLEGFISGKTTPPPAEIEKKEGDKKEGEKTIKIANPAVD 81

Query: 1182 SWNRQDQXXXXXXXXXXSENVLISTVGLTTSKDIWEGLQIEFATRNTAKVMQFRLQLQTM 1003
             W   DQ          S  +L    G TT+   W+ +   FA+++ A ++  RL L + 
Sbjct: 82   EWFATDQQVLGFLFSSLSREILSQVAGATTAAQAWQAISDMFASKSRAGLINMRLALTST 141

Query: 1002 KKGNMPMKDYLNKIKSCCDILNSAGEEISEKVQILYILGGLGPEYDSVMVSITARAEPCS 823
            +KG M + +Y+ K+++  D L +AG+ I +   I YI+ GL   +D V+ ++ AR EP +
Sbjct: 142  QKGTMSVTEYVAKMRAIADELAAAGKPIDQDDLIAYIINGLDANFDPVVEALVARVEPIT 201

Query: 822  LREAQAILLSFENRLESYDNHGNTENSQFYVNLTTQSQVNTYRRGGFNQAGRGRGSSQNT 643
            ++E  + LL+FEN++             F    T  +  N   RGG     RGRG     
Sbjct: 202  VQEMYSHLLNFENKIRL--------RQAFLTASTNAANRNNVTRGGRGGMPRGRGG---- 249

Query: 642  RGGRSQGRTANYXXXXXXXXXXXXRCQICHYNNHTADKCFYRLDMNFVPXXXXXXXXXXY 463
            RGG  +G                  CQ+C+   H A  C++R D  +VP           
Sbjct: 250  RGGGGRGGNGGRGNNGGGRGDNRPTCQVCNKRGHVASDCWHRFDETYVPD---------- 299

Query: 462  TQQTGHNTNPSVHVASIGNSGNDIHQDMSDMSWYPDSGATNHVTYDLGNLNIASEYQGGD 283
                            IG  G   H    D +WY D+GAT+H+T  L  L    +YQG D
Sbjct: 300  --------------EKIG--GAATHAYGIDTNWYVDTGATDHITSQLDKLTTKEKYQGTD 343

Query: 282  KVQLGNGSGPSHRGSTS 232
            ++   +G G  H  + S
Sbjct: 344  QIHTASGEGQGHEENNS 360


>gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1180

 Score =  162 bits (409), Expect(2) = 7e-40
 Identities = 112/375 (29%), Positives = 177/375 (47%), Gaps = 10/375 (2%)
 Frame = -2

Query: 1353 LTIKLGDNNYLIWKQQVWAAVNGYGLEGFLTGESIRPEKYTIDTSGKKTTAI-NPAYVSW 1177
            +T KLG  NYLIWK QV A + G  L+G+LTG    P   TI     K   + NPA+  W
Sbjct: 18   VTEKLGKGNYLIWKVQVLAVIRGARLDGYLTGAIRAPSPTTIIKKSDKDVEVPNPAFDEW 77

Query: 1176 NRQDQXXXXXXXXXXSENVLISTVGLTTSKDIWEGLQIEFATRNTAKVMQFRLQLQTMKK 997
               DQ          S +VL       ++  +W  ++  F++   A+ +  ++ L   KK
Sbjct: 78   IANDQQVLGYLLTTMSRDVLSKVATCGSAAALWSVVEGMFSSATRARSINTKITLTNTKK 137

Query: 996  GNMPMKDYLNKIKSCCDILNSAGEEISEKVQILYILGGLGPEYDSVMVSITARAEPCSLR 817
            G++ + +Y+ KI++  D L ++ + + E+  I +I+ GL  +++ ++ S+ +++E  SL 
Sbjct: 138  GDLSVAEYVGKIRALADELATSDKLVDEEDLISFIIVGLDEDFEPIISSLVSKSEHVSLG 197

Query: 816  EAQAILLSFENRLESYDNHGNTENSQFYVNLTTQSQVNTYRRGGFNQAGRGRGSSQNT-- 643
            EA + LLSFE R++    H          NL  +      R  G  Q GRG G+  N   
Sbjct: 198  EAYSQLLSFEQRMKLRQEHS--------ANLAHRG-----RGRGQQQQGRGCGNQGNQQQ 244

Query: 642  ----RGGRSQGR---TANYXXXXXXXXXXXXRCQICHYNNHTADKCFYRLDMNFVPXXXX 484
                RGG++ GR     +Y            +CQ+C+   HT   C+YR D +FVP    
Sbjct: 245  QQCGRGGKNCGRGRGNTSYQRQGGNNTDNRPKCQLCYKRGHTVIDCWYRYDEDFVP---- 300

Query: 483  XXXXXXYTQQTGHNTNPSVHVASIGNSGNDIHQDMSDMSWYPDSGATNHVTYDLGNLNIA 304
                         +   +   AS G           D +WY D+GAT+H+T +L  L I 
Sbjct: 301  -------------DEKYAGTAASYG----------VDSNWYVDTGATDHITGELEKLTIR 337

Query: 303  SEYQGGDKVQLGNGS 259
             +Y+G D+VQ  NG+
Sbjct: 338  DKYKGQDQVQAANGA 352



 Score = 30.8 bits (68), Expect(2) = 7e-40
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = -1

Query: 139 FSFQKKNPSAFS---AAVNKKHSLVVWHNRLGHPSMDIVKRALQGCNIP 2
           F     +PSA     A      SL  WH RLGHPS  I ++ ++  ++P
Sbjct: 370 FPLPSSSPSAHQDKEALAATTPSLERWHCRLGHPSYAIAEKVVRNHDLP 418


>emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]
          Length = 1079

 Score =  170 bits (431), Expect = 1e-39
 Identities = 112/370 (30%), Positives = 189/370 (51%), Gaps = 8/370 (2%)
 Frame = -2

Query: 1350 TIKLGDNNYLIWKQQVWAAVNGYGLEGFLTGESIRPEKYTIDTSGKKTTAINPAYVSWNR 1171
            ++KL ++N+LIW++Q+++A+ G+ L+ F+ G      K+   +  +    +N  ++ W +
Sbjct: 26   SVKLENHNFLIWRKQIFSAIRGHNLQHFVIGVHDPSLKFR-SSEDRSQGIVNQDFLDWEQ 84

Query: 1170 QDQXXXXXXXXXXSENVLISTVGLTTSKDIWEGLQIEFATRNTAKVMQFRLQLQTMKKGN 991
            QDQ           E VL   +   ++  IW+ L++ FA++   K+ Q++  LQ  KK +
Sbjct: 85   QDQLLVSWLLSSMFEGVLSRCINCESAFQIWKTLEVYFASQTRIKISQYKTLLQNTKKES 144

Query: 990  MPMKDYLNKIKSCCDILNSAGEEISEKVQILYILGGLGPEYDSVMVSITARAEPCSLREA 811
            + M +YL KI+   D+L   G  +S K  I  I  GL  EYD+  ++I +R E  S+ E 
Sbjct: 145  LSMNEYLLKIRGFVDLLALVGVNLSVKDHIDAITDGLLSEYDTFFLTINSRTEDYSIEEI 204

Query: 810  QAILLSFENRLESYDNHGNTENSQFYVNLTTQSQVN-TYRRGGFNQAGRGRGSSQNTRGG 634
            +++LL+ E R+E +    N    +  + +  + Q +  + RG F+   RGR   Q  RGG
Sbjct: 205  ESLLLAQEARIEKH----NKRLLKLLLVILHKIQFHPNFGRGNFSP--RGRDGFQG-RGG 257

Query: 633  RSQG--RTANYXXXXXXXXXXXXRCQICHYNNHTADKCFYRLDMNF----VPXXXXXXXX 472
             + G  R+ N              CQ+C    H+AD+C+YR D +F     P        
Sbjct: 258  FNNGGWRSWNTWNNNATANAEKPVCQVCMKIGHSADRCYYRYDPSFQGPHTPGFTPSFQK 317

Query: 471  XXYTQ-QTGHNTNPSVHVASIGNSGNDIHQDMSDMSWYPDSGATNHVTYDLGNLNIASEY 295
               TQ Q G+  N  V +A+         +++ D +WYPDSGA+NHVT +  NL   + Y
Sbjct: 318  SPQTQIQGGNKPNMQVLMAT--------PENICDTNWYPDSGASNHVTTNANNLVEHTPY 369

Query: 294  QGGDKVQLGN 265
             G ++V++GN
Sbjct: 370  YGNEQVRVGN 379