BLASTX nr result
ID: Rehmannia25_contig00017164
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00017164
(790 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme... 167 5e-39
ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polyme... 158 2e-36
ref|XP_002310025.1| hypothetical protein POPTRDRAFT_562704 [Popu... 156 9e-36
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme... 154 3e-35
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 149 1e-33
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 149 1e-33
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu... 147 3e-33
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 146 7e-33
gb|EXB59781.1| putative RNA-dependent RNA polymerase 4 [Morus no... 143 8e-32
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 142 1e-31
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 141 2e-31
ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polyme... 139 1e-30
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 139 1e-30
gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial ... 138 2e-30
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme... 136 7e-30
ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps... 136 7e-30
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 129 1e-27
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A... 125 1e-26
ref|XP_002883965.1| RNA-dependent RNA polymerase family protein ... 122 1e-25
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera] 120 7e-25
>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 911
Score = 167 bits (422), Expect = 5e-39
Identities = 107/234 (45%), Positives = 141/234 (60%), Gaps = 14/234 (5%)
Frame = +2
Query: 131 STSPYISPHTLNGENLQSPLLSFPV--------ESPSSNLDRTG------PQNISCQLSF 268
S+SP+ SP + SPLL FP ESPS + G PQ ++ QLSF
Sbjct: 88 SSSPFNSPL----KRSSSPLL-FPSPEGKRVQGESPSKSKLEMGFLACASPQKVARQLSF 142
Query: 269 EDETPEKRSYVIQEKKSPSVRRQSPLAGEQRETTEPTTISQQLMILNKLEYRKLFLVLSY 448
+E PE + RR SP +SQQLMILN+LE+RKLFLVLSY
Sbjct: 143 REE-PES-----------NCRRTSP------------NVSQQLMILNELEFRKLFLVLSY 178
Query: 449 IGRQKLEDVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCDKSDRSQYLGWDSGKTHI 628
IG +KLED+V+ A++I K+L M FES+IW +G+ + +SDRS+Y+ W+ KTHI
Sbjct: 179 IGCKKLEDIVSPQIADDIVRKKNLSMTDFESEIWNAFGKAYYAESDRSKYVDWNCRKTHI 238
Query: 629 YCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTVKFLEDGAYVTDKIVEEG 790
Y CH+ ++G FKGPYLN+ R HLQR+LGDD +L VKF+ED + + IVEEG
Sbjct: 239 YYCHIKQNGQCTFKGPYLNTARTHLQRALGDDNVLLVKFVEDTS-CANMIVEEG 291
>ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 759
Score = 158 bits (399), Expect = 2e-36
Identities = 104/278 (37%), Positives = 146/278 (52%), Gaps = 16/278 (5%)
Frame = +2
Query: 5 RSFSGFVACLVKKEY---------------PIVAATVLADYESPQASPQTQRIWSPSSTS 139
++ SGF+ + KK Y P+++A ES SPQ +R S +S
Sbjct: 64 KTLSGFIVFMAKKYYQSETQQFYQKQNHEQPVLSA------ESFYHSPQIRR---NSLSS 114
Query: 140 PYISPHTLNGENLQSPLLSF-PVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKK 316
P S ++N P+ + +S+ +GP+ S LS + +K Y
Sbjct: 115 PNSSCSSVNFSPRNRPIFQDRDIVGDTSDSPTSGPRIPSPPLSPVTTSFQKCHY------ 168
Query: 317 SPSVRRQSPLAGEQRETTEPTTISQQLMILNKLEYRKLFLVLSYIGRQKLEDVVTLDGAN 496
P + R+ IS+QL+ LNKLE+RK FL+L+YIGR+K+EDV+TL
Sbjct: 169 -------DPSPSKFRDRASTRGISEQLLALNKLEFRKFFLILNYIGRRKVEDVITLHDVG 221
Query: 497 EIHSMKDLPMEVFESKIWITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGP 676
+I M PM FES IW YG C+ + R QYL WDSG+TH+Y CHV D SY FKGP
Sbjct: 222 DILDMIYQPMSHFESYIWNKYGH-LCEHNKRVQYLDWDSGRTHLYHCHVHSDRSYTFKGP 280
Query: 677 YLNSTRNHLQRSLGDDKILTVKFLEDGAYVTDKIVEEG 790
YL + R HLQ SLGD+ +L VKF ++ ++IV+ G
Sbjct: 281 YLKAERTHLQHSLGDENVLIVKFEQNTPGCPEEIVQNG 318
>ref|XP_002310025.1| hypothetical protein POPTRDRAFT_562704 [Populus trichocarpa]
Length = 305
Score = 156 bits (394), Expect = 9e-36
Identities = 92/197 (46%), Positives = 120/197 (60%), Gaps = 16/197 (8%)
Frame = +2
Query: 209 SPSSNLDRTGPQNISCQLSFEDETPEKRSYV-----IQEKKSPSVRRQSPLA-------- 349
SP+ N + P NI LS + P+ RS + + +S S QSP++
Sbjct: 76 SPNINASSSSP-NIHSSLSPSPQQPQNRSPITTTRLLMNSQSDS-GAQSPISLKLEGSST 133
Query: 350 -GEQRETTEPTTISQQLMILNKLEYRKLFLVLSYIGRQKLEDVVTLDGANEIHSMKDLPM 526
QR+ +T SQ L+ L +LE+RK FL+LSY+G + LE+VV++D +I KDLPM
Sbjct: 134 MDSQRQRGNESTTSQHLVALGELEFRKAFLILSYLGGKNLEEVVSVD---QIRGYKDLPM 190
Query: 527 EVFESKIWITYG--QKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNH 700
FESKIW +G + + + DR +YL WDSGKTHIY CHV DGSY FKGPYL+ RN
Sbjct: 191 RTFESKIWEAFGCRRDYIKEEDRVKYLDWDSGKTHIYHCHVDPDGSYRFKGPYLSKQRNV 250
Query: 701 LQRSLGDDKILTVKFLE 751
LQR+LGDD IL VKF E
Sbjct: 251 LQRTLGDDNILMVKFEE 267
>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 1110
Score = 154 bits (389), Expect = 3e-35
Identities = 109/312 (34%), Positives = 153/312 (49%), Gaps = 50/312 (16%)
Frame = +2
Query: 5 RSFSGFVACLVKKEYPIVAATVLA--DYESPQAS-------PQTQR--IWSPSSTS---- 139
++ SGF+ + KK Y +YE P S PQ +R + SP+S+
Sbjct: 64 KTLSGFIVFMAKKYYQSETQQFYQKQNYEEPVPSAESFYHSPQIRRSSLSSPNSSCSSVN 123
Query: 140 ------PYISPHTLNGENLQSPLLSFPVESP------------------SSNLDRTGPQN 247
P + + G+ SP + + SP S+ DR +
Sbjct: 124 FSPRNRPIFQDNDIVGDASDSPTSAPRIPSPPMSPVTTSFQRDHYDPRPSTFRDRASTRG 183
Query: 248 ISCQL------SFEDETPEKRSYVIQEKKSP---SVRRQ--SPLAGEQRETTEPTTISQQ 394
IS QL ++P + SP S +R P R+ IS+Q
Sbjct: 184 ISEQLLALNIVGDASDSPTSAPRIPSPPMSPVTTSFQRDHYDPRPSTFRDRASTRGISEQ 243
Query: 395 LMILNKLEYRKLFLVLSYIGRQKLEDVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFC 574
L+ L+KLE+RK FL+L+YIGR+K+EDV+ L +I M PM FES IW YG C
Sbjct: 244 LLALSKLEFRKFFLILNYIGRRKVEDVIMLHDVGDILDMIYQPMSHFESYIWNKYGH-LC 302
Query: 575 DKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTVKFLED 754
+ + R QYL WDSG+TH+Y CHV DGSY FKGPYL + R HLQ+SLGD+ +L VKF ++
Sbjct: 303 EHNKRVQYLDWDSGRTHLYHCHVHSDGSYTFKGPYLKAERTHLQQSLGDENVLIVKFEQN 362
Query: 755 GAYVTDKIVEEG 790
++IV+ G
Sbjct: 363 TPGCPEEIVQNG 374
>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334280|gb|ERP58267.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 877
Score = 149 bits (376), Expect = 1e-33
Identities = 76/134 (56%), Positives = 95/134 (70%), Gaps = 2/134 (1%)
Frame = +2
Query: 356 QRETTEPTTISQQLMILNKLEYRKLFLVLSYIGRQKLEDVVTLDGANEIHSMKDLPMEVF 535
QR+ +T SQ L+ L +LE+RK FL+LSY+G + LE+VV++D +I KDLPM F
Sbjct: 4 QRQRGNESTTSQHLVALGELEFRKAFLILSYLGGKNLEEVVSVD---QIRGYKDLPMRTF 60
Query: 536 ESKIWITYG--QKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQR 709
ESKIW +G + + + DR +YL WDSGKTHIY CHV DGSY FKGPYL+ RN LQR
Sbjct: 61 ESKIWEAFGCRRDYIKEEDRVKYLDWDSGKTHIYHCHVDPDGSYRFKGPYLSKLRNVLQR 120
Query: 710 SLGDDKILTVKFLE 751
+LGDD IL VKF E
Sbjct: 121 TLGDDNILMVKFGE 134
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 149 bits (376), Expect = 1e-33
Identities = 76/134 (56%), Positives = 95/134 (70%), Gaps = 2/134 (1%)
Frame = +2
Query: 356 QRETTEPTTISQQLMILNKLEYRKLFLVLSYIGRQKLEDVVTLDGANEIHSMKDLPMEVF 535
QR+ +T SQ L+ L +LE+RK FL+LSY+G + LE+VV++D +I KDLPM F
Sbjct: 26 QRQRGNESTTSQHLVALGELEFRKAFLILSYLGGKNLEEVVSVD---QIRGYKDLPMRTF 82
Query: 536 ESKIWITYG--QKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQR 709
ESKIW +G + + + DR +YL WDSGKTHIY CHV DGSY FKGPYL+ RN LQR
Sbjct: 83 ESKIWEAFGCRRDYIKEEDRVKYLDWDSGKTHIYHCHVDPDGSYRFKGPYLSKLRNVLQR 142
Query: 710 SLGDDKILTVKFLE 751
+LGDD IL VKF E
Sbjct: 143 TLGDDNILMVKFGE 156
>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
gi|550336519|gb|ERP59562.1| hypothetical protein
POPTR_0006s17780g [Populus trichocarpa]
Length = 866
Score = 147 bits (372), Expect = 3e-33
Identities = 75/134 (55%), Positives = 94/134 (70%), Gaps = 2/134 (1%)
Frame = +2
Query: 356 QRETTEPTTISQQLMILNKLEYRKLFLVLSYIGRQKLEDVVTLDGANEIHSMKDLPMEVF 535
QR+ +T SQ L+ L +LE+RK FL+L+Y+G + LE+VV+ D +I KDLPME F
Sbjct: 4 QRQRGSESTTSQHLVALGELEFRKAFLILNYLGGKNLEEVVSAD---QIRGYKDLPMETF 60
Query: 536 ESKIWITYG--QKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQR 709
ESKIW +G + + + DR +YL WDSGK HIY CHV DGSY FKGPYL+ RN LQR
Sbjct: 61 ESKIWDAFGCRRDYIKEEDRVKYLDWDSGKAHIYHCHVDPDGSYRFKGPYLSKQRNVLQR 120
Query: 710 SLGDDKILTVKFLE 751
+LGDD IL VKF E
Sbjct: 121 TLGDDNILMVKFEE 134
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 146 bits (369), Expect = 7e-33
Identities = 74/130 (56%), Positives = 93/130 (71%)
Frame = +2
Query: 386 SQQLMILNKLEYRKLFLVLSYIGRQKLEDVVTLDGANEIHSMKDLPMEVFESKIWITYGQ 565
S QL+ L +LE+RK FL+LSYIG ++ ED+++ A EI +K+LPM VFE+++W G+
Sbjct: 99 SPQLVALGELEFRKAFLILSYIGDKRPEDLLS---AEEILKLKNLPMGVFETEVWNNLGR 155
Query: 566 KFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTVKF 745
KF + DR + WDS KTHIY CHV DGSY FKGPYLN TR HLQR LGD+ IL VKF
Sbjct: 156 KFIKEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFKGPYLNKTRTHLQRVLGDENILLVKF 215
Query: 746 LEDGAYVTDK 775
ED VTD+
Sbjct: 216 AED---VTDR 222
>gb|EXB59781.1| putative RNA-dependent RNA polymerase 4 [Morus notabilis]
Length = 529
Score = 143 bits (360), Expect = 8e-32
Identities = 73/166 (43%), Positives = 105/166 (63%), Gaps = 10/166 (6%)
Frame = +2
Query: 293 SYVIQEKKSP---SVRRQSPLAGEQRETTEPTTISQ-------QLMILNKLEYRKLFLVL 442
+Y+++++ P S +SP+ R ++ P T + Q+ L +LE+RK FL+L
Sbjct: 76 TYLLRQQPPPPSLSSPSRSPVPENSRPSSSPGTFANSQGANGAQMEALGELEFRKQFLIL 135
Query: 443 SYIGRQKLEDVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCDKSDRSQYLGWDSGKT 622
+YIGR +L+ V T A EI S+K+L M FE ++W +G+K+ D+ DR Y WDSGKT
Sbjct: 136 NYIGRNELQSVTT---AEEIRSLKNLSMVQFEKQVWQRFGEKYVDQEDRRIYHDWDSGKT 192
Query: 623 HIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTVKFLEDGA 760
HIY CHV +GS+ FKGPYL + HLQ+ LGDD +L VKF E+ A
Sbjct: 193 HIYRCHVSPEGSFRFKGPYLEKPKKHLQKVLGDDNVLMVKFAEEEA 238
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 142 bits (359), Expect = 1e-31
Identities = 90/217 (41%), Positives = 116/217 (53%), Gaps = 9/217 (4%)
Frame = +2
Query: 131 STSPYISPHTLNGENLQSPLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQE 310
S S YI+ N SPL SPSS P ++ P+ YV+
Sbjct: 66 SFSGYINYLVKKRNNNGSPLKRVCF-SPSSPQQNRSPVTVTTVRLLN--LPQGTDYVV-- 120
Query: 311 KKSPSVRRQSPLAGEQRETTEPTTISQ---------QLMILNKLEYRKLFLVLSYIGRQK 463
+QSP+A +Q + ++IS Q + L +LE+RK FL+LSYIG
Sbjct: 121 -------KQSPVADQQPRGSPMSSISHAMRHRASIPQYVALGELEFRKAFLILSYIGENS 173
Query: 464 LEDVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCDKSDRSQYLGWDSGKTHIYCCHV 643
LE+V+T D EI M+DL M FES++W G+K + DR L WDSGKTH+Y CH+
Sbjct: 174 LEEVITAD---EIRGMRDLQMARFESEVWEKLGRKNISQEDRRMSLKWDSGKTHMYHCHI 230
Query: 644 CEDGSYYFKGPYLNSTRNHLQRSLGDDKILTVKFLED 754
G+ FKGPYLN TR HLQR LGDD IL VKF E+
Sbjct: 231 STKGNCTFKGPYLNQTRTHLQRELGDDNILLVKFDEE 267
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 141 bits (356), Expect = 2e-31
Identities = 75/152 (49%), Positives = 96/152 (63%), Gaps = 9/152 (5%)
Frame = +2
Query: 326 VRRQSPLAGEQRETTEPTTISQ---------QLMILNKLEYRKLFLVLSYIGRQKLEDVV 478
V +QSP+A +Q + ++IS Q + L +LE+RK FL+LSYIG LE+V+
Sbjct: 117 VVKQSPVADQQPRGSPMSSISHAMRHRASIPQYVALGELEFRKAFLILSYIGENSLEEVI 176
Query: 479 TLDGANEIHSMKDLPMEVFESKIWITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGS 658
T D EI M+DL M FES++W G+K + DR L WDSGKTH+Y CH+ G+
Sbjct: 177 TAD---EIRGMRDLQMARFESEVWEKLGRKNISQEDRRMSLKWDSGKTHMYHCHISTKGN 233
Query: 659 YYFKGPYLNSTRNHLQRSLGDDKILTVKFLED 754
FKGPYLN TR HLQR LGDD IL VKF E+
Sbjct: 234 CTFKGPYLNQTRTHLQRELGDDNILLVKFDEE 265
>ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cicer
arietinum]
Length = 997
Score = 139 bits (350), Expect = 1e-30
Identities = 82/204 (40%), Positives = 117/204 (57%), Gaps = 6/204 (2%)
Frame = +2
Query: 161 LNGENLQSPLLSFPVESPSSNLDRTGPQNISCQLSFEDETPEKRSYVIQEKKSPSVR-RQ 337
++ + ++ L +F V + + P S S + R Y +Q + ++ R
Sbjct: 51 ISTQPIKRSLNAFTVYMINQHRSPPSPSRPSSSQSQSQSQSQSRPYSLQSQLLSHLQSRP 110
Query: 338 SPLAGEQRE----TTEPTTISQQLMILNKLEYRKLFLVLSYIGRQKLEDVVTLDGANEIH 505
SPL + +T P S L L +LE+RK FL++SY GR+ +E+VVT A +
Sbjct: 111 SPLPLRSQSLPSSSTAPPPHSDVLTALGELEFRKSFLLMSYAGRENIENVVT---AEYVR 167
Query: 506 SMKDLPMEVFESKIWITYGQKFCDK-SDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYL 682
S+K+L M+ FE +IW T GQK+ ++ +DR YL WDSG+THIY C V +GS FKGP L
Sbjct: 168 SLKELTMKNFEKEIWETVGQKYIERPTDRLVYLDWDSGRTHIYQCFVSPNGSLRFKGPIL 227
Query: 683 NSTRNHLQRSLGDDKILTVKFLED 754
TR HLQ+SLGDD +L VKF ED
Sbjct: 228 QHTRTHLQKSLGDDNVLLVKFAED 251
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 139 bits (349), Expect = 1e-30
Identities = 74/138 (53%), Positives = 92/138 (66%), Gaps = 8/138 (5%)
Frame = +2
Query: 386 SQQLMILNKLEYRKLFLVLSYIGRQKLEDVVTLDGANEIHSMKDLPMEVFESKIWITYGQ 565
S QL+ L +LE+RK FL+LSYIG + ED+++ A EI +K+LPM VFE+++W G+
Sbjct: 99 SPQLVALGELEFRKAFLILSYIGELRPEDLLS---AEEILKLKNLPMGVFETEVWNNLGR 155
Query: 566 KFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFK--------GPYLNSTRNHLQRSLGD 721
KF + DR + WDS KTHIY CHV DGSY FK GPYLN TR HLQR LGD
Sbjct: 156 KFIKEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFKVCISSSLNGPYLNKTRTHLQRVLGD 215
Query: 722 DKILTVKFLEDGAYVTDK 775
+ IL VKF ED VTD+
Sbjct: 216 ENILLVKFAED---VTDR 230
>gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial [Phaseolus
vulgaris]
Length = 689
Score = 138 bits (347), Expect = 2e-30
Identities = 70/131 (53%), Positives = 87/131 (66%), Gaps = 1/131 (0%)
Frame = +2
Query: 368 TEPTTISQQLMILNKLEYRKLFLVLSYIGRQKLEDVVTLDGANEIHSMKDLPMEVFESKI 547
T P S L L ++E+RK FL LSYIGR+ LE+V + D I S+KDLPM FE I
Sbjct: 100 TRPGQTSSALHALGEMEFRKAFLCLSYIGRESLENVASADC---IRSLKDLPMATFEKTI 156
Query: 548 WITYGQKFC-DKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDD 724
W +G+ +SDR Y+ WDSG+TH+Y C+V DGS FKGP L ST+ HLQRSLGDD
Sbjct: 157 WEAFGKDHIYSQSDRQVYVDWDSGRTHVYQCYVSSDGSLRFKGPILQSTQTHLQRSLGDD 216
Query: 725 KILTVKFLEDG 757
+L VKF E+G
Sbjct: 217 NVLLVKFAENG 227
>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine
max]
Length = 988
Score = 136 bits (343), Expect = 7e-30
Identities = 72/140 (51%), Positives = 93/140 (66%), Gaps = 6/140 (4%)
Frame = +2
Query: 359 RETTEPT-----TISQQLMILNKLEYRKLFLVLSYIGRQKLEDVVTLDGANEIHSMKDLP 523
R+ T PT T S L L +LE+RK FL+LSYIGR+ LE+ +T +I S+KDLP
Sbjct: 106 RQQTSPTRPPRPTPSSLLHALGELEFRKAFLILSYIGRESLENCIT---DAKIRSLKDLP 162
Query: 524 MEVFESKIWITYGQK-FCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNH 700
M FE IW +G+K D+SDR + W+SG+TH+Y C V DG+ FKGP L STR H
Sbjct: 163 MAKFEKTIWEDFGEKCIYDQSDRQLHRDWNSGRTHVYQCFVFPDGNLRFKGPILQSTRTH 222
Query: 701 LQRSLGDDKILTVKFLEDGA 760
LQ++LGDD +L VKF EDG+
Sbjct: 223 LQKTLGDDNVLLVKFAEDGS 242
>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
gi|482565615|gb|EOA29804.1| hypothetical protein
CARUB_v10012898mg [Capsella rubella]
Length = 982
Score = 136 bits (343), Expect = 7e-30
Identities = 82/187 (43%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Frame = +2
Query: 194 SFPVESPSSNLDRTGPQNISCQ-LSFEDETPEKRSYV-IQEKKSPSVRRQSPLAGE-QRE 364
SF V + + TG Q +S S + +P R + ++ SV +P + QRE
Sbjct: 75 SFIVSKVNQAVSVTGSQRLSSGGSSAQPRSPSGRHVCRVLDQDEMSVDSDAPSSKSLQRE 134
Query: 365 TTEPTTISQQLMILNKLEYRKLFLVLSYIGRQKLEDVVTLDGANEIHSMKDLPMEVFESK 544
T QL+ L +LE++K FL+LSYI Q+L +VVT A EI KDLPM +E+
Sbjct: 135 DVGGTLHIPQLVALGELEFKKAFLLLSYIPGQRLGEVVT---AEEIRRWKDLPMVAYEAA 191
Query: 545 IWITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDD 724
+W + G+KFC ++D + L WDSGKTH Y CHV DGSY FKGP L ST HL + LGD+
Sbjct: 192 VWDSLGRKFCPQTDE-RVLQWDSGKTHYYQCHVAPDGSYTFKGPLLESTGTHLHKVLGDE 250
Query: 725 KILTVKF 745
+LTVKF
Sbjct: 251 NVLTVKF 257
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 129 bits (324), Expect = 1e-27
Identities = 79/189 (41%), Positives = 108/189 (57%), Gaps = 3/189 (1%)
Frame = +2
Query: 194 SFPVESPSSNLDRTGPQNISCQLS-FEDETPEKRSY--VIQEKKSPSVRRQSPLAGEQRE 364
SF V + ++ TG +S +S +P R V+QE+ S SP + + E
Sbjct: 72 SFIVSKVNQAVNFTGYPRLSSGVSPANSRSPSGRHVCRVLQEEMSVDSDAPSPKSLKSEE 131
Query: 365 TTEPTTISQQLMILNKLEYRKLFLVLSYIGRQKLEDVVTLDGANEIHSMKDLPMEVFESK 544
I Q L+ L +LE++K FL+LSYI Q+L V T D EI KDLPM +E+
Sbjct: 132 NGGSLHIPQ-LVALGELEFKKAFLLLSYIPGQQLGQVTTAD---EIRLWKDLPMVAYEAA 187
Query: 545 IWITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDD 724
+W G+++C ++DR + L WDSGKTH Y CHV DGSY FKGP L T HL + LGD+
Sbjct: 188 VWDRLGRRYCPQTDR-RMLQWDSGKTHYYQCHVAPDGSYTFKGPLLEHTGTHLHKVLGDE 246
Query: 725 KILTVKFLE 751
+LTVKF +
Sbjct: 247 NVLTVKFAD 255
>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
gi|548857326|gb|ERN15132.1| hypothetical protein
AMTR_s00056p00110240 [Amborella trichopoda]
Length = 988
Score = 125 bits (315), Expect = 1e-26
Identities = 63/139 (45%), Positives = 94/139 (67%)
Frame = +2
Query: 338 SPLAGEQRETTEPTTISQQLMILNKLEYRKLFLVLSYIGRQKLEDVVTLDGANEIHSMKD 517
S L + R T + Q L +LE+RK FL+L+YIG+Q+++DV++++ +I + KD
Sbjct: 109 SSLMNDFRCNTYGSNEFQFRKALGELEFRKAFLILNYIGKQRIDDVLSIE---KIRTWKD 165
Query: 518 LPMEVFESKIWITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRN 697
L M+ FE ++W T G+++ ++DR L WDSGK Y CHV G++ FKGP+L ST+
Sbjct: 166 LSMQCFEYEVWRTVGERYASQTDRRN-LDWDSGKAENYQCHVDPVGNFSFKGPFLESTQT 224
Query: 698 HLQRSLGDDKILTVKFLED 754
HL+R LGDDK+LTVKF E+
Sbjct: 225 HLRRVLGDDKVLTVKFAEE 243
>ref|XP_002883965.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329805|gb|EFH60224.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 934
Score = 122 bits (306), Expect = 1e-25
Identities = 68/157 (43%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
Frame = +2
Query: 278 TPEKRSYVIQEKKSPSVRRQSPLAGEQRETTEPTTISQQLMILNKLEYRKLFLVLSYIGR 457
TP K+S + + S + SP + E + L+ L +LE++K FL+LSYIG
Sbjct: 94 TPGKKSCRLFQDVSIDLETPSPKFLRREENGGSSKHIPPLLALGELEFKKAFLLLSYIGG 153
Query: 458 QKL-EDVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCDKSDRSQYLGWDSGKTHIYC 634
+ L E+V++ D EI KDLPM +E+++W GQ++C +R + L DSGKTH Y
Sbjct: 154 ESLVEEVISGD---EIRKWKDLPMVEYEAEVWNRLGQRYCPPKERRRPLEGDSGKTHYYQ 210
Query: 635 CHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTVKF 745
CHV DGSY FKG L T HL + LGDD +LTVKF
Sbjct: 211 CHVAPDGSYKFKGYLLEDTGTHLHKVLGDDNVLTVKF 247
>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
Length = 1202
Score = 120 bits (300), Expect = 7e-25
Identities = 61/114 (53%), Positives = 78/114 (68%)
Frame = +2
Query: 434 LVLSYIGRQKLEDVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCDKSDRSQYLGWDS 613
L++ I ++ ED+++ A EI +K+LPM VFE+++W G+KF + DR + WDS
Sbjct: 478 LLIQQIEIKRPEDLLS---AEEILKLKNLPMGVFETEVWNNLGRKFIKEEDRQRSFDWDS 534
Query: 614 GKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTVKFLEDGAYVTDK 775
KTHIY CHV DGSY FKGPYLN TR HLQR LGD+ IL VKF ED VTD+
Sbjct: 535 DKTHIYHCHVSPDGSYRFKGPYLNKTRTHLQRVLGDENILLVKFAED---VTDR 585