BLASTX nr result
ID: Rehmannia25_contig00016715
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00016715
(434 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mi... 137 2e-30
ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592... 136 3e-30
ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-lik... 136 3e-30
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ... 136 3e-30
gb|ESW32209.1| hypothetical protein PHAVU_002G302500g [Phaseolus... 136 3e-30
gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea] 136 3e-30
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik... 136 3e-30
emb|CBI33811.3| unnamed protein product [Vitis vinifera] 136 3e-30
ref|XP_006656336.1| PREDICTED: tRNA pseudouridine synthase A, mi... 134 1e-29
ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-lik... 134 1e-29
ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-lik... 134 1e-29
ref|XP_006372225.1| tRNA pseudouridine synthase family protein [... 132 5e-29
ref|XP_002331405.1| predicted protein [Populus trichocarpa] 132 5e-29
ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Popu... 130 1e-28
dbj|BAD45865.1| pseudouridylate synthase-like [Oryza sativa Japo... 129 3e-28
gb|EAZ01977.1| hypothetical protein OsI_24011 [Oryza sativa Indi... 129 3e-28
ref|XP_004503558.1| PREDICTED: tRNA pseudouridine synthase A-lik... 128 7e-28
gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis] 128 9e-28
ref|XP_004965639.1| PREDICTED: uncharacterized protein LOC101778... 127 1e-27
gb|AFW76096.1| pseudouridylate synthase [Zea mays] 127 2e-27
>ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
isoform X1 [Glycine max]
Length = 444
Score = 137 bits (344), Expect = 2e-30
Identities = 67/99 (67%), Positives = 76/99 (76%), Gaps = 2/99 (2%)
Frame = -3
Query: 384 GKPELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXX 205
G EL SV + DR+GRWAR TF+I+LSYHG SFDGWQKQPGLNTVQ ++E +LGKFVD
Sbjct: 118 GSSELESVASEDRSGRWARTTFKIILSYHGGSFDGWQKQPGLNTVQSIVEGSLGKFVDEK 177
Query: 204 XXXXXXXXXLPIEGCALVAGRTDKGVTALEQVCSF--WK 94
LPIEGCA+VAGRTDKGVT L+QVCSF WK
Sbjct: 178 KTQLLKDKGLPIEGCAIVAGRTDKGVTGLQQVCSFYTWK 216
>ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592314 [Solanum tuberosum]
Length = 436
Score = 136 bits (343), Expect = 3e-30
Identities = 70/116 (60%), Positives = 83/116 (71%), Gaps = 4/116 (3%)
Frame = -3
Query: 432 KEKYAVHYGAEVVEDCGKPELVSVPAPDRT----GRWARVTFRILLSYHGFSFDGWQKQP 265
KE A H AE+ ED K ELV++P D++ GRWAR F I+LSYHG SFDGWQKQP
Sbjct: 79 KETPADHEDAEIREDHEKSELVNIPVKDKSRDKSGRWARANFMIVLSYHGGSFDGWQKQP 138
Query: 264 GLNTVQGLIERALGKFVDXXXXXXXXXXXLPIEGCALVAGRTDKGVTALEQVCSFW 97
LNTVQGL+ER+LG+FVD LP+E CALVAGRTDKGV+A +QVCSF+
Sbjct: 139 DLNTVQGLVERSLGEFVDEKKAQLLKDKNLPLEACALVAGRTDKGVSASQQVCSFY 194
>ref|XP_004242889.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum
lycopersicum]
Length = 436
Score = 136 bits (343), Expect = 3e-30
Identities = 70/116 (60%), Positives = 83/116 (71%), Gaps = 4/116 (3%)
Frame = -3
Query: 432 KEKYAVHYGAEVVEDCGKPELVSVPAPDRT----GRWARVTFRILLSYHGFSFDGWQKQP 265
KE A H AE+ ED K ELV++P D++ GRWAR F I+LSYHG SFDGWQKQP
Sbjct: 79 KETPADHEDAEIREDHEKSELVNIPVKDKSRDKSGRWARANFMIVLSYHGGSFDGWQKQP 138
Query: 264 GLNTVQGLIERALGKFVDXXXXXXXXXXXLPIEGCALVAGRTDKGVTALEQVCSFW 97
LNTVQGL+ER+LG+FVD LP+E CALVAGRTDKGV+A +QVCSF+
Sbjct: 139 DLNTVQGLVERSLGEFVDEKKAQLLKDKNLPLEACALVAGRTDKGVSASQQVCSFY 194
>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
putative [Ricinus communis]
Length = 443
Score = 136 bits (343), Expect = 3e-30
Identities = 67/111 (60%), Positives = 79/111 (71%)
Frame = -3
Query: 429 EKYAVHYGAEVVEDCGKPELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTV 250
+ + V A++ ED K EL DR GRWARV F+I LSYHG SFDGWQKQPGLNTV
Sbjct: 86 QMHFVRDDAKIQEDSNKTELEHFSNEDRFGRWARVNFKIDLSYHGGSFDGWQKQPGLNTV 145
Query: 249 QGLIERALGKFVDXXXXXXXXXXXLPIEGCALVAGRTDKGVTALEQVCSFW 97
QGL+E++LGKFVD P+EGCA+VAGRTDKGV+AL QVCSF+
Sbjct: 146 QGLVEKSLGKFVDEKKAQQLKEACKPLEGCAVVAGRTDKGVSALRQVCSFY 196
Score = 55.1 bits (131), Expect = 1e-05
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -2
Query: 97 ESYQFMYARPWQKVNDFYLDVVNGRQSLSELF 2
ES+QFMYARPWQ+V+DFY +VVNGR S ELF
Sbjct: 52 ESFQFMYARPWQEVSDFYSNVVNGRLSFLELF 83
>gb|ESW32209.1| hypothetical protein PHAVU_002G302500g [Phaseolus vulgaris]
Length = 440
Score = 136 bits (342), Expect = 3e-30
Identities = 67/96 (69%), Positives = 76/96 (79%), Gaps = 2/96 (2%)
Frame = -3
Query: 375 ELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXX 196
EL SV + DR+GRWAR TF+I+LSYHG SFDGWQKQPGLNTVQG++E +LGKFVD
Sbjct: 118 ELESVASEDRSGRWARRTFKIILSYHGGSFDGWQKQPGLNTVQGIVEASLGKFVDEKKTQ 177
Query: 195 XXXXXXLPIEGCALVAGRTDKGVTALEQVCSF--WK 94
LPIEGCA+VAGRTDKGVT L+QVCSF WK
Sbjct: 178 LLKDKGLPIEGCAVVAGRTDKGVTGLQQVCSFYTWK 213
>gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea]
Length = 406
Score = 136 bits (342), Expect = 3e-30
Identities = 67/112 (59%), Positives = 82/112 (73%)
Frame = -3
Query: 432 KEKYAVHYGAEVVEDCGKPELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNT 253
KEK+A+H ++ P S+P RTGRWAR+TF+I+LSYHG+SFDGWQKQPGLNT
Sbjct: 72 KEKHAIHDTDRTLDVYNYPS-ASLPNEQRTGRWARLTFKIILSYHGYSFDGWQKQPGLNT 130
Query: 252 VQGLIERALGKFVDXXXXXXXXXXXLPIEGCALVAGRTDKGVTALEQVCSFW 97
VQGLIE +LG F+D LP +GCA+VAGRTDKGV+AL QVCSF+
Sbjct: 131 VQGLIENSLGVFIDEKKALQLKEKNLPRDGCAVVAGRTDKGVSALGQVCSFY 182
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/32 (78%), Positives = 31/32 (96%)
Frame = -2
Query: 97 ESYQFMYARPWQKVNDFYLDVVNGRQSLSELF 2
ESYQFMY+RPWQ+VN FYL++VNGR++LSELF
Sbjct: 39 ESYQFMYSRPWQRVNCFYLELVNGRRTLSELF 70
>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
Length = 433
Score = 136 bits (342), Expect = 3e-30
Identities = 70/114 (61%), Positives = 82/114 (71%), Gaps = 2/114 (1%)
Frame = -3
Query: 429 EKYAVHYGAEVVEDCGKPELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTV 250
E + +H G E+VE K E +V DR GRWAR+TF+I+LSYHG SFDGWQKQPGLNTV
Sbjct: 75 ETHPIHDG-EIVEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTV 133
Query: 249 QGLIERALGKFVDXXXXXXXXXXXLPIEGCALVAGRTDKGVTALEQVCSF--WK 94
QGL+E +LG+FVD LP+EG VAGRTDKGVTAL+QVCSF WK
Sbjct: 134 QGLVEASLGRFVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWK 187
>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
Length = 402
Score = 136 bits (342), Expect = 3e-30
Identities = 70/114 (61%), Positives = 82/114 (71%), Gaps = 2/114 (1%)
Frame = -3
Query: 429 EKYAVHYGAEVVEDCGKPELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTV 250
E + +H G E+VE K E +V DR GRWAR+TF+I+LSYHG SFDGWQKQPGLNTV
Sbjct: 75 ETHPIHDG-EIVEASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTV 133
Query: 249 QGLIERALGKFVDXXXXXXXXXXXLPIEGCALVAGRTDKGVTALEQVCSF--WK 94
QGL+E +LG+FVD LP+EG VAGRTDKGVTAL+QVCSF WK
Sbjct: 134 QGLVEASLGRFVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWK 187
>ref|XP_006656336.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Oryza
brachyantha]
Length = 364
Score = 134 bits (338), Expect = 1e-29
Identities = 66/102 (64%), Positives = 77/102 (75%), Gaps = 3/102 (2%)
Frame = -3
Query: 393 EDCGKP---ELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALG 223
+DC P + P+ DR GRW RVTF+I+LSYHG SFDGWQKQPGLNTVQGL+E+ LG
Sbjct: 44 DDCTPPSEKQASMKPSKDRGGRWERVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKHLG 103
Query: 222 KFVDXXXXXXXXXXXLPIEGCALVAGRTDKGVTALEQVCSFW 97
+FVD LPIEGCA+VAGRTDKGVTAL+QVCSF+
Sbjct: 104 QFVDEKKAKQLEARSLPIEGCAIVAGRTDKGVTALQQVCSFY 145
>ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
Length = 444
Score = 134 bits (337), Expect = 1e-29
Identities = 68/106 (64%), Positives = 75/106 (70%)
Frame = -3
Query: 414 HYGAEVVEDCGKPELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIE 235
H AE EL D+TGRWAR TF+I+LSY G SFDGWQKQPGLNTVQGL+E
Sbjct: 89 HDDAETPLIYNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVE 148
Query: 234 RALGKFVDXXXXXXXXXXXLPIEGCALVAGRTDKGVTALEQVCSFW 97
R+LGKFVD LP+EGCALVAGRTDKGVTAL QVCSF+
Sbjct: 149 RSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFY 194
>ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
Length = 444
Score = 134 bits (337), Expect = 1e-29
Identities = 68/106 (64%), Positives = 75/106 (70%)
Frame = -3
Query: 414 HYGAEVVEDCGKPELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIE 235
H AE EL D+TGRWAR TF+I+LSY G SFDGWQKQPGLNTVQGL+E
Sbjct: 89 HDDAETPLIYNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVE 148
Query: 234 RALGKFVDXXXXXXXXXXXLPIEGCALVAGRTDKGVTALEQVCSFW 97
R+LGKFVD LP+EGCALVAGRTDKGVTAL QVCSF+
Sbjct: 149 RSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFY 194
>ref|XP_006372225.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
gi|550318756|gb|ERP50022.1| tRNA pseudouridine synthase
family protein [Populus trichocarpa]
Length = 457
Score = 132 bits (332), Expect = 5e-29
Identities = 65/113 (57%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
Frame = -3
Query: 432 KEKYAVHYGAEVVEDCGKPELVS-VPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLN 256
K+ + VH ++ E + L+ V D++GRWARVTF+I+LSYHG SFDGWQKQPGLN
Sbjct: 98 KKAHDVHCDDKIEEVSNETGLLEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLN 157
Query: 255 TVQGLIERALGKFVDXXXXXXXXXXXLPIEGCALVAGRTDKGVTALEQVCSFW 97
TVQGL+E++LG+FVD P+EGCA VAGRTDKGV+AL+QVCSF+
Sbjct: 158 TVQGLVEKSLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCSFY 210
>ref|XP_002331405.1| predicted protein [Populus trichocarpa]
Length = 428
Score = 132 bits (332), Expect = 5e-29
Identities = 65/113 (57%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
Frame = -3
Query: 432 KEKYAVHYGAEVVEDCGKPELVS-VPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLN 256
K+ + VH ++ E + L+ V D++GRWARVTF+I+LSYHG SFDGWQKQPGLN
Sbjct: 69 KKAHDVHCDDKIEEVSNETGLLEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLN 128
Query: 255 TVQGLIERALGKFVDXXXXXXXXXXXLPIEGCALVAGRTDKGVTALEQVCSFW 97
TVQGL+E++LG+FVD P+EGCA VAGRTDKGV+AL+QVCSF+
Sbjct: 129 TVQGLVEKSLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVCSFY 181
>ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Populus trichocarpa]
gi|550318755|gb|ERP50021.1| hypothetical protein
POPTR_0018s14400g [Populus trichocarpa]
Length = 448
Score = 130 bits (328), Expect = 1e-28
Identities = 61/92 (66%), Positives = 73/92 (79%)
Frame = -3
Query: 372 LVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXXX 193
L V D++GRWARVTF+I+LSYHG SFDGWQKQPGLNTVQGL+E++LG+FVD
Sbjct: 110 LEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKSLGRFVDEKKAQQ 169
Query: 192 XXXXXLPIEGCALVAGRTDKGVTALEQVCSFW 97
P+EGCA VAGRTDKGV+AL+QVCSF+
Sbjct: 170 LKEQCKPLEGCASVAGRTDKGVSALQQVCSFY 201
>dbj|BAD45865.1| pseudouridylate synthase-like [Oryza sativa Japonica Group]
Length = 495
Score = 129 bits (325), Expect = 3e-28
Identities = 61/85 (71%), Positives = 70/85 (82%)
Frame = -3
Query: 351 DRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXXXXXXXXLP 172
DR GRW RVTF+I+LSYHG SFDGWQKQPGLNTVQGL+E+ LG+FVD LP
Sbjct: 113 DRGGRWERVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKHLGQFVDEKKAKQLEARSLP 172
Query: 171 IEGCALVAGRTDKGVTALEQVCSFW 97
+EGCA+VAGRTDKGVTAL+QVCSF+
Sbjct: 173 LEGCAVVAGRTDKGVTALQQVCSFY 197
>gb|EAZ01977.1| hypothetical protein OsI_24011 [Oryza sativa Indica Group]
gi|125598125|gb|EAZ37905.1| hypothetical protein
OsJ_22255 [Oryza sativa Japonica Group]
Length = 417
Score = 129 bits (325), Expect = 3e-28
Identities = 61/85 (71%), Positives = 70/85 (82%)
Frame = -3
Query: 351 DRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXXXXXXXXLP 172
DR GRW RVTF+I+LSYHG SFDGWQKQPGLNTVQGL+E+ LG+FVD LP
Sbjct: 113 DRGGRWERVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKHLGQFVDEKKAKQLEARSLP 172
Query: 171 IEGCALVAGRTDKGVTALEQVCSFW 97
+EGCA+VAGRTDKGVTAL+QVCSF+
Sbjct: 173 LEGCAVVAGRTDKGVTALQQVCSFY 197
>ref|XP_004503558.1| PREDICTED: tRNA pseudouridine synthase A-like [Cicer arietinum]
Length = 422
Score = 128 bits (322), Expect = 7e-28
Identities = 67/107 (62%), Positives = 76/107 (71%), Gaps = 2/107 (1%)
Frame = -3
Query: 408 GAEVVEDCGKPELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERA 229
G V+ D K EL + DR GRWAR+ F+I+LSYHG SFDGWQKQP LNTVQ ++E +
Sbjct: 91 GISVLSD--KTELEKGVSKDRGGRWARINFKIVLSYHGESFDGWQKQPSLNTVQSVVEAS 148
Query: 228 LGKFVDXXXXXXXXXXXLPIEGCALVAGRTDKGVTALEQVCSF--WK 94
LGKFVD LPIEGCA VAGRTDKGVTAL+QVCSF WK
Sbjct: 149 LGKFVDEMKTQLLKEKGLPIEGCASVAGRTDKGVTALQQVCSFYTWK 195
>gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]
Length = 446
Score = 128 bits (321), Expect = 9e-28
Identities = 66/122 (54%), Positives = 84/122 (68%), Gaps = 5/122 (4%)
Frame = -3
Query: 429 EKYAVH---YGAEVVEDCGKPELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGL 259
+KY V Y AE+ E ++ + +R+GRWAR TF+++L YHG SFDGWQKQPGL
Sbjct: 91 KKYQVDDDDYDAEIPE-ISDDKVKLKKSEERSGRWARATFKVVLGYHGASFDGWQKQPGL 149
Query: 258 NTVQGLIERALGKFVDXXXXXXXXXXXLPIEGCALVAGRTDKGVTALEQVCSF--WKVIS 85
NTVQGL+ER+LG+FVD LP+E C +VAGRTDKGVTAL+QVCSF W+
Sbjct: 150 NTVQGLVERSLGRFVDEKKAQLLKDKCLPLEACTVVAGRTDKGVTALQQVCSFYTWRKDI 209
Query: 84 SC 79
+C
Sbjct: 210 TC 211
>ref|XP_004965639.1| PREDICTED: uncharacterized protein LOC101778125 [Setaria italica]
Length = 422
Score = 127 bits (320), Expect = 1e-27
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = -3
Query: 375 ELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXX 196
+ ++ + DR GRW RVTF+I+LSYHG SFDGWQKQPGLNTVQGL+E+ LG+FVD
Sbjct: 112 QTATISSKDRGGRWERVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKHLGQFVDERKAK 171
Query: 195 XXXXXXLPIEGCALVAGRTDKGVTALEQVCSFW 97
LPIEG A+VAGRTDKGVTAL+QVCSF+
Sbjct: 172 QLEARSLPIEGGAIVAGRTDKGVTALQQVCSFY 204
>gb|AFW76096.1| pseudouridylate synthase [Zea mays]
Length = 422
Score = 127 bits (319), Expect = 2e-27
Identities = 59/84 (70%), Positives = 69/84 (82%)
Frame = -3
Query: 348 RTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXXXXXXXXLPI 169
R GRW RVTF++++SYHG SFDGWQKQPGLNTVQGL+E+ LG+FVD LPI
Sbjct: 120 RGGRWERVTFKVVISYHGGSFDGWQKQPGLNTVQGLVEKHLGQFVDERKAKQLEARSLPI 179
Query: 168 EGCALVAGRTDKGVTALEQVCSFW 97
EGCA+VAGRTDKGVTAL+QVCSF+
Sbjct: 180 EGCAIVAGRTDKGVTALQQVCSFY 203