BLASTX nr result
ID: Rehmannia25_contig00016706
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00016706
(667 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein A... 142 7e-32
ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein A... 139 6e-31
gb|EXB74531.1| hypothetical protein L484_026228 [Morus notabilis] 129 6e-28
ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein A... 127 3e-27
ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein A... 126 5e-27
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A... 120 4e-25
ref|XP_004289281.1| PREDICTED: putative ribonuclease H protein A... 117 3e-24
ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein A... 115 9e-24
ref|YP_008992319.1| hypothetical protein Salmi_Mp055 (mitochondr... 114 2e-23
gb|AGV40503.1| hypothetical protein [Phaseolus vulgaris] 112 8e-23
ref|XP_004305144.1| PREDICTED: putative ribonuclease H protein A... 112 8e-23
gb|EMJ14652.1| hypothetical protein PRUPE_ppa024777mg, partial [... 110 3e-22
ref|XP_004301067.1| PREDICTED: uncharacterized protein LOC101309... 105 1e-20
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g... 102 8e-20
ref|XP_004304990.1| PREDICTED: putative ribonuclease H protein A... 100 5e-19
ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein A... 99 9e-19
ref|XP_004289115.1| PREDICTED: putative ribonuclease H protein A... 97 4e-18
ref|XP_002516681.1| conserved hypothetical protein [Ricinus comm... 96 1e-17
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 93 6e-17
ref|XP_002304990.2| hypothetical protein POPTR_0004s03265g [Popu... 89 1e-15
>ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 197
Score = 142 bits (359), Expect = 7e-32
Identities = 76/195 (38%), Positives = 106/195 (54%), Gaps = 3/195 (1%)
Frame = +1
Query: 10 MQNTQEDLLCLHRLKIQGRPPKDPRIILVPWSLPLPGWIKVNTNGCATGAPGLITAAAVY 189
M+NT +L LHR+ I+GRP K P+I+ V W +P +K+NT+G A G+PGL ++
Sbjct: 1 MKNTVGELCILHRIGIKGRPSKAPKIVEVMWHVPSIYQVKLNTDGAARGSPGLAGFGGIF 60
Query: 190 RTYWGFFCGCFVELCGTGYAFEAELVVAMRAISYAFQKGWTNLWLESDSTYMVDLFRSRV 369
R + G GCF G A EAEL + AI A Q+GW +LW+ESDST ++ S
Sbjct: 61 RDHLGHVLGCFSGNLGIANALEAELQTVIHAIQMASQRGWHSLWIESDSTLVIHFLSSFQ 120
Query: 370 GSVPWRLLNQWCYSIFLIS*MNFVVTHIYREGNRVADQLNKLMCAST---WWDAHPADII 540
VPWR +W +++ M V+HIYREGN +AD L + WWD+ P I
Sbjct: 121 VDVPWRFTTEWFNCRTILTTMTVKVSHIYREGNSIADCLANFGADNAGVHWWDSCPPCAI 180
Query: 541 SLLTDYYVGRVQYRF 585
+ + G Y F
Sbjct: 181 TAYSRDLAGFPNYCF 195
>ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 197
Score = 139 bits (351), Expect = 6e-31
Identities = 76/195 (38%), Positives = 106/195 (54%), Gaps = 3/195 (1%)
Frame = +1
Query: 10 MQNTQEDLLCLHRLKIQGRPPKDPRIILVPWSLPLPGWIKVNTNGCATGAPGLITAAAVY 189
M+NT +L LHR+ I+GRP K P+I+ V W + +K+NT+G A G+PGL ++
Sbjct: 1 MKNTVGELCILHRIGIKGRPSKVPKIVEVMWHVLSIYQVKLNTDGAARGSPGLAGFGGIF 60
Query: 190 RTYWGFFCGCFVELCGTGYAFEAELVVAMRAISYAFQKGWTNLWLESDSTYMVDLFRSRV 369
R + G CF G A EAEL + AI A Q+GW +LW+ESDST ++ S
Sbjct: 61 RDHLGQVLCCFSGNLGIATALEAELQAVIHAIQMASQRGWRSLWIESDSTLVIHFLSSFQ 120
Query: 370 GSVPWRLLNQWCYSIFLIS*MNFVVTHIYREGNRVADQLNKLMCAST---WWDAHPADII 540
VPWR +W +++ M V+HIYREGNRVAD L + WWD++P I
Sbjct: 121 VDVPWRFTTEWFNCRTILTSMTVKVSHIYREGNRVADCLANFGADNAGVHWWDSYPPCAI 180
Query: 541 SLLTDYYVGRVQYRF 585
+ + YRF
Sbjct: 181 TAYSRDLADFPNYRF 195
>gb|EXB74531.1| hypothetical protein L484_026228 [Morus notabilis]
Length = 203
Score = 129 bits (325), Expect = 6e-28
Identities = 65/164 (39%), Positives = 93/164 (56%)
Frame = +1
Query: 4 GSMQNTQEDLLCLHRLKIQGRPPKDPRIILVPWSLPLPGWIKVNTNGCATGAPGLITAAA 183
G N+ ++ L++L ++ P+ P+I LV W P GW+KVN + A GA I
Sbjct: 31 GYSYNSAFEIRILNKLYVRQNFPRSPKIFLVYWIPPPSGWVKVNIDSSAKGALDPIACGG 90
Query: 184 VYRTYWGFFCGCFVELCGTGYAFEAELVVAMRAISYAFQKGWTNLWLESDSTYMVDLFRS 363
++R GF C CF G G+AFEAEL + AIS F+ GW LWLESDS+ ++ L
Sbjct: 91 IFRNARGFVCDCFSVFLGNGFAFEAELWAVINAISITFENGWHKLWLESDSSLIICLLSF 150
Query: 364 RVGSVPWRLLNQWCYSIFLIS*MNFVVTHIYREGNRVADQLNKL 495
+ V W+L N+W ++ L M+F +H+YRE N AD+L L
Sbjct: 151 KFLQVSWKLRNEWSRAVSLSIRMDFHFSHVYREINGCADKLANL 194
>ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 235
Score = 127 bits (319), Expect = 3e-27
Identities = 77/189 (40%), Positives = 97/189 (51%), Gaps = 3/189 (1%)
Frame = +1
Query: 28 DLLCLHRLKIQGRPPKDPRIILVPWSLPLPGWIKVNTNGCATGAPGLITAAAVYRTYWGF 207
D L L + + K PRI V W P WIKVNTNG A G PG V+R G
Sbjct: 46 DARLLASLGVASKGGKAPRIQHVLWQPPFFPWIKVNTNGLAKGNPGPAACGGVFRDASGG 105
Query: 208 FCGCFVELCGTGYAFEAELVVAMRAISYAFQKGWTNLWLESDSTYMVDLFRSRVGSVPWR 387
F G F G +F +EL V + AI A KGW LWLESDS +V F SR S W
Sbjct: 106 FLGSFCHSLGWKTSFYSELYVVILAIEIAHDKGWVYLWLESDSVSVVACFSSRSFSPTWN 165
Query: 388 LLNQWCYSIFLIS*MNFVVTHIYREGNRVADQLNKLMCAS---TWWDAHPADIISLLTDY 558
L +W + +I MNF +HI+REGN VAD++ L ++ TW+D ++ L
Sbjct: 166 LRVRWNNCLLIIRQMNFRYSHIFREGNIVADKMANLGLSNVSFTWYDNPLTELHGFLQAD 225
Query: 559 YVGRVQYRF 585
Y+G YRF
Sbjct: 226 YLGIPNYRF 234
>ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 209
Score = 126 bits (317), Expect = 5e-27
Identities = 75/189 (39%), Positives = 98/189 (51%), Gaps = 3/189 (1%)
Frame = +1
Query: 28 DLLCLHRLKIQGRPPKDPRIILVPWSLPLPGWIKVNTNGCATGAPGLITAAAVYRTYWGF 207
D L L + + K PRI V W P WIKVNT+G A G P V+R G
Sbjct: 20 DARLLAFLGVAPKGGKAPRIQHVLWQPPFFPWIKVNTDGLAKGNPSPAACGGVFRDASGG 79
Query: 208 FCGCFVELCGTGYAFEAELVVAMRAISYAFQKGWTNLWLESDSTYMVDLFRSRVGSVPWR 387
F G F + G +F +EL + AI A KGW LWLESDS +V F S+ S PW
Sbjct: 80 FLGSFCQSLGWKTSFYSELYAVILAIEIAHDKGWVYLWLESDSVSVVACFSSKSFSPPWN 139
Query: 388 LLNQWCYSIFLIS*MNFVVTHIYREGNRVADQLNKLMCAS---TWWDAHPADIISLLTDY 558
L +W + +I MNF +HI+REGN VAD++ L ++ TW+D P ++ L
Sbjct: 140 LRVRWNNCLSIIRQMNFRCSHIFREGNMVADKMANLGLSNASFTWYDNPPTELHGFLQAD 199
Query: 559 YVGRVQYRF 585
Y+G YRF
Sbjct: 200 YLGIPNYRF 208
>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 872
Score = 120 bits (301), Expect = 4e-25
Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 3/197 (1%)
Frame = +1
Query: 4 GSMQNTQEDLLCLHRLKIQGRPPKDPRIILVPWSLPLPGWIKVNTNGCATGAPGLITAAA 183
G M NT DL L R + PR++ V W P GWIK+N++G G+ A
Sbjct: 676 GHMHNTIHDLCILKSFGACCRSRRIPRMVEVIWHPPSIGWIKINSDGAWKHEEGIGGFGA 735
Query: 184 VYRTYWGFFCGCFVELCGTGYAFEAELVVAMRAISYAFQKGWTNLWLESDSTYMVDLFRS 363
V+R Y G F G F + A+++V + AI A+ + W ++WLE D + ++D RS
Sbjct: 736 VFRYYKGQFVGAFASHIDIPSSIAAKVMVVITAIELAWVRDWKHVWLEVDFSTVLDYIRS 795
Query: 364 RVGSVPWRLLNQWCYSIFLIS*MNFVVTHIYREGNRVADQL---NKLMCASTWWDAHPAD 534
VPW+L +W ++ IS M F +HI+REGNRVAD L M WWD P+
Sbjct: 796 -PSLVPWQLRVRWLNCLYRISTMTFKSSHIFREGNRVADALANHGTSMSEEVWWDVPPSF 854
Query: 535 IISLLTDYYVGRVQYRF 585
I+S +G +RF
Sbjct: 855 ILSYYERDLLGMPNFRF 871
>ref|XP_004289281.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 215
Score = 117 bits (293), Expect = 3e-24
Identities = 68/165 (41%), Positives = 89/165 (53%), Gaps = 3/165 (1%)
Frame = +1
Query: 82 RIILVPWSLPLPGWIKVNTNGCATGAPGLITAAAVYRTYWGFFCGCFVELCGTGYAFEAE 261
RI LV W PL WIK+NT+G A G PG T V+R Y G F G F G F +E
Sbjct: 44 RIRLVLWHPPLSPWIKLNTDGLAKGNPGPATCGGVFRDYQGHFIGGFSTPIGHHNDFFSE 103
Query: 262 LVVAMRAISYAFQKGWTNLWLESDSTYMVDLFRSRVGSVPWRLLNQWCYSIFLIS*MNFV 441
L+ + I AFQ GW ++WLE DST +V+ F PW+L W + M+F
Sbjct: 104 LLAVIIGIELAFQLGWQHVWLECDSTSVVECFSKSSFVPPWQLRTLWYNCVARTRSMSFF 163
Query: 442 VTHIYREGNRVADQLNKLMCASTWWDAH---PADIISLLTDYYVG 567
+H+ REGN VAD+L L +S+ W H PA+II L ++G
Sbjct: 164 CSHVLREGNIVADRLVNLGMSSSSWIWHASPPAEIIHFLRMDFLG 208
>ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 364
Score = 115 bits (289), Expect = 9e-24
Identities = 67/178 (37%), Positives = 95/178 (53%), Gaps = 3/178 (1%)
Frame = +1
Query: 4 GSMQNTQEDLLCLHRLKIQGRPPKDPRIILVPWSLPLPGWIKVNTNGCATGAPGLITAAA 183
G M N+ +L L + + RP + PRI V W PL GWIKVNT+G G
Sbjct: 181 GCMSNSLTELRVLKKFGLLCRPHRAPRITEVNWHPPLFGWIKVNTDGAWQKTTGKSGYGG 240
Query: 184 VYRTYWGFFCGCFVELCGTGYAFEAELVVAMRAISYAFQKGWTNLWLESDSTYMVDLFRS 363
++R + G F G F + +AE++ ++AI A+ + W ++WLE DS +++ F
Sbjct: 241 IFRDFHGSFLGAFASNLEILNSVDAEVMAVIQAIELAWVRDWEHIWLEVDSIIVLN-FLQ 299
Query: 364 RVGSVPWRLLNQWCYSIFLIS*MNFVVTHIYREGNRVADQLNKL---MCASTWWDAHP 528
VPWRL W + IS MNF +HI+REGN+VAD L + M A +WWD P
Sbjct: 300 DPHLVPWRLRVGWGNFLHRISQMNFRSSHIFREGNQVADALANMGLSMSALSWWDEPP 357
>ref|YP_008992319.1| hypothetical protein Salmi_Mp055 (mitochondrion) [Salvia
miltiorrhiza] gi|534292292|gb|AGU16584.1| hypothetical
protein Salmi_Mp055 (mitochondrion) [Salvia
miltiorrhiza]
Length = 119
Score = 114 bits (286), Expect = 2e-23
Identities = 58/116 (50%), Positives = 72/116 (62%)
Frame = +1
Query: 241 GYAFEAELVVAMRAISYAFQKGWTNLWLESDSTYMVDLFRSRVGSVPWRLLNQWCYSIFL 420
G+AFEAELV M A+ AF KGW +LW+ESDS Y+V L RSR VPW N+W Y++ L
Sbjct: 2 GFAFEAELVGVMMAVDIAFSKGWHSLWIESDSIYVVSLLRSRSMIVPWNHRNRWLYTLHL 61
Query: 421 IS*MNFVVTHIYREGNRVADQLNKLMCASTWWDAHPADIISLLTDYYVGRVQYRFV 588
I MN VVTHI+REGN VAD L WW++ P I S + G +RF+
Sbjct: 62 IRQMNIVVTHIFREGNHVADALANAAGDLKWWNSMPDFISSAVYRDIAGVSFFRFI 117
>gb|AGV40503.1| hypothetical protein [Phaseolus vulgaris]
Length = 234
Score = 112 bits (281), Expect = 8e-23
Identities = 63/165 (38%), Positives = 85/165 (51%)
Frame = +1
Query: 1 KGSMQNTQEDLLCLHRLKIQGRPPKDPRIILVPWSLPLPGWIKVNTNGCATGAPGLITAA 180
K SM+N D + I+ R K R + + W P PGW+K+NT+G A G PGL T
Sbjct: 36 KASMKNDMLDFNVIKFFGIKTRSGKVLRPLPIRWEFPSPGWVKINTDGAARGYPGLATCG 95
Query: 181 AVYRTYWGFFCGCFVELCGTGYAFEAELVVAMRAISYAFQKGWTNLWLESDSTYMVDLFR 360
++R G F G F A AE + A+ A + G TN+WLE DS + F
Sbjct: 96 GIFRGSMGEFIGAFSAFLEVQTALVAEFYGVIHAMEEAQKMGLTNVWLECDSALVCAAFT 155
Query: 361 SRVGSVPWRLLNQWCYSIFLIS*MNFVVTHIYREGNRVADQLNKL 495
+R +VPW L N+W + + F VTHI+REGN AD+L L
Sbjct: 156 ART-NVPWMLQNRWNTCLNFCGTIRFRVTHIFREGNACADKLANL 199
>ref|XP_004305144.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 183
Score = 112 bits (281), Expect = 8e-23
Identities = 66/164 (40%), Positives = 86/164 (52%), Gaps = 3/164 (1%)
Frame = +1
Query: 85 IILVPWSLPLPGWIKVNTNGCATGAPGLITAAAVYRTYWGFFCGCFVELCGTGYAFEAEL 264
I LV W PL WIK+NT+G A G G V+R Y G F G F G AF +EL
Sbjct: 13 IRLVLWHPPLSPWIKLNTDGLAKGNSGPAACGGVFRDYQGHFIGGFSTPIGHHNAFFSEL 72
Query: 265 VVAMRAISYAFQKGWTNLWLESDSTYMVDLFRSRVGSVPWRLLNQWCYSIFLIS*MNFVV 444
+ + I FQ GW ++WLE DST +V+ F PW+L W I M+F
Sbjct: 73 LAVIIGIELTFQLGWQHVWLECDSTSVVECFSKSSFVPPWQLRTLWYNCAARIRSMSFFC 132
Query: 445 THIYREGNRVADQLNKLMCASTWWDAH---PADIISLLTDYYVG 567
+H+ REGN VAD+L L +S+ W H PA+II L ++G
Sbjct: 133 SHVLREGNTVADRLANLGMSSSSWIWHASPPAEIIPFLRMDFLG 176
>gb|EMJ14652.1| hypothetical protein PRUPE_ppa024777mg, partial [Prunus persica]
Length = 465
Score = 110 bits (276), Expect = 3e-22
Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 3/193 (1%)
Frame = +1
Query: 1 KGSMQNTQEDLLCLHRLKIQGRPPKDPRIILVPWSLPLPGWIKVNTNGCATGAPGLITAA 180
+G + N DL + + + RP + +I+ V W P G++K+ +G G +
Sbjct: 273 RGHILNKVHDLCIIRSIGVHYRPRPNSKIVEVTWHPPCFGFVKIKIDGACKRDSGKAGSG 332
Query: 181 AVYRTYWGFFCGCFVELCGTGYAFEAELVVAMRAISYAFQKGWTNLWLESDSTYMVDLFR 360
V+R Y G G F AE++ ++AI A+ W N+W+E+DS + FR
Sbjct: 333 GVFRNYQGHVLGAFSANLDVPSGVHAEVLAVIKAIELAWLHAWHNIWIETDSLLVTKFFR 392
Query: 361 SRVGSVPWRLLNQWCYSIFLIS*MNFVVTHIYREGNRVADQL---NKLMCASTWWDAHPA 531
S VPWRL W + + M+F ++HI+REGN D L L TWWD P+
Sbjct: 393 S-PHLVPWRLRVDWQNCLLRLQHMSFKISHIFREGNHDVDALANHGALGSGLTWWDTAPS 451
Query: 532 DIISLLTDYYVGR 570
I +LL+ VGR
Sbjct: 452 FIFALLSAGLVGR 464
>ref|XP_004301067.1| PREDICTED: uncharacterized protein LOC101309260 [Fragaria vesca
subsp. vesca]
Length = 209
Score = 105 bits (262), Expect = 1e-20
Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 4/199 (2%)
Frame = +1
Query: 4 GSMQNTQEDLLCLHRLKIQGRPPKDPRIILVPWSLPLPGWIKVNTNGCATGAPGLITAAA 183
G M N+ +L L + + + PRII V W PL IK+NTNG A G
Sbjct: 13 GCMNNSVSELCVLKCFDVPCKSRRAPRIIEVNWIPPLFDCIKINTNGAFNHASGKAGFRG 72
Query: 184 VYRTYWGFFCGCFVELCGTGY-AFEAELVVAMRAISYAFQKGWTNLWLESDSTYMVDLFR 360
V+R + G F G F C +AE++ ++AI A+ + W ++WLE DS +++
Sbjct: 73 VFRNFKGEFIGVFA--CNLDIPCSDAEVMAVIKAIDLAWVREWRHIWLEVDSAIVLNFIH 130
Query: 361 SRVGSVPWRLLNQWCYSIFLIS*MNFVVTHIYREGNRVADQLNKLMCAST---WWDAHPA 531
S +PWR W ++ +S M F +HI+REGN+VAD L +S+ +WD+ P
Sbjct: 131 S-PHLIPWRFRVAWDNCMYRVSQMQFQCSHIFREGNQVADALANFDLSSSSLVYWDSIPQ 189
Query: 532 DIISLLTDYYVGRVQYRFV 588
+++L +G +RF+
Sbjct: 190 FLMNLCLQDQLGLPHFRFL 208
>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
gi|355506707|gb|AES87849.1| GDSL esterase/lipase
[Medicago truncatula]
Length = 1004
Score = 102 bits (255), Expect = 8e-20
Identities = 54/134 (40%), Positives = 75/134 (55%)
Frame = +1
Query: 85 IILVPWSLPLPGWIKVNTNGCATGAPGLITAAAVYRTYWGFFCGCFVELCGTGYAFEAEL 264
II W WIK NT+G +T + V+R F CF + G G A++ EL
Sbjct: 220 IISTIWYNRNQRWIKFNTDGASTATSS--SCGGVFRDQNANFLSCFAKNLGGGSAYQPEL 277
Query: 265 VVAMRAISYAFQKGWTNLWLESDSTYMVDLFRSRVGSVPWRLLNQWCYSIFLIS*MNFVV 444
MR + A+Q+ W N+W+ESDS +V F+ ++ +P RL N+W L+ MNFV+
Sbjct: 278 AAIMRVVEIAYQRNWRNIWIESDSALVVMAFK-KMSMIPCRLRNRWINCRKLLCRMNFVI 336
Query: 445 THIYREGNRVADQL 486
THIYRE NR AD+L
Sbjct: 337 THIYREDNRCADKL 350
>ref|XP_004304990.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 202
Score = 100 bits (248), Expect = 5e-19
Identities = 56/161 (34%), Positives = 87/161 (54%)
Frame = +1
Query: 4 GSMQNTQEDLLCLHRLKIQGRPPKDPRIILVPWSLPLPGWIKVNTNGCATGAPGLITAAA 183
G M N +DL + + R + PR+I V W P+ GW+K+N++G A G+ A
Sbjct: 35 GPMHNLVQDLQIIKSFGAECRLGRAPRVIEVVWHPPVIGWVKINSDGAWKHAEGVGGFGA 94
Query: 184 VYRTYWGFFCGCFVELCGTGYAFEAELVVAMRAISYAFQKGWTNLWLESDSTYMVDLFRS 363
++R + G F + AE++ + AI A+ + W ++WLE DS+ ++D RS
Sbjct: 95 IFRDFKCHVLGAFSSNIDIPSSVAAEVIAVIVAIELAWVRDWKHIWLEVDSSLVLDYLRS 154
Query: 364 RVGSVPWRLLNQWCYSIFLIS*MNFVVTHIYREGNRVADQL 486
+ VPW L +W + IS M F +HI+REGN+VAD L
Sbjct: 155 PL-LVPWHLRVRWLNCLRCISKMIFRSSHIFREGNKVADAL 194
>ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 409
Score = 99.4 bits (246), Expect = 9e-19
Identities = 63/178 (35%), Positives = 90/178 (50%), Gaps = 3/178 (1%)
Frame = +1
Query: 4 GSMQNTQEDLLCLHRLKIQGRPPKDPRIILVPWSLPLPGWIKVNTNGCATGAPGLITAAA 183
G M N+ L L + + P + RI V W PL GWIKVNT+G G
Sbjct: 213 GCMSNSLTKLRVLKKFGLLCHPCQALRITKVNWHPPLFGWIKVNTDGAWQKTTGKSGYGG 272
Query: 184 VYRTYWGFFCGCFVELCGTGYAFEAELVVAMRAISYAFQKGWTNLWLESDSTYMVDLFRS 363
++R + G F G F + +AE++ ++AI A+ + W ++ LE DS +++ F
Sbjct: 273 IFRDFHGSFLGAFASNLEIPNSVDAEVMAVIQAIELAWVRDWKHILLEVDSAIVLN-FLH 331
Query: 364 RVGSVPWRLLNQWCYSIFLIS*MNFVVTHIYREGNRVADQLNKL---MCASTWWDAHP 528
VPWRL + IS MNF +HI+REGN+VAD L + M A +WWD P
Sbjct: 332 DPHLVPWRLRVACGNCLHRISQMNFRSSHIFREGNQVADTLVNMGLSMFALSWWDEPP 389
>ref|XP_004289115.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 210
Score = 97.1 bits (240), Expect = 4e-18
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 3/198 (1%)
Frame = +1
Query: 4 GSMQNTQEDLLCLHRLKIQGRPPKDPRIILVPWSLPLPGWIKVNTNGCATGAPGLITAAA 183
G M N+ +L L + + + PRII V W PL IK+NT+G G
Sbjct: 13 GCMNNSISELCVLKCFDVPCKLRRAPRIIEVNWIPPLFDCIKINTDGAFNYDSGKAGFGG 72
Query: 184 VYRTYWGFFCGCFVELCGTGYAFEAELVVAMRAISYAFQKGWTNLWLESDSTYMVDLFRS 363
V+R + G F G F + +AE++V ++AI A+ + W ++WLE D +++ S
Sbjct: 73 VFRNFKGEFIGAFACNLHIPCSVDAEVMVVIKAIELAWIREWKHIWLEVDFAIVLNFIHS 132
Query: 364 RVGSVPWRLLNQWCYSIFLIS*MNFVVTHIYREGNRVADQLNKLMCAST---WWDAHPAD 534
VPWR W ++ +S M F +HI+REGN+VA L +S+ +WD+ P
Sbjct: 133 -PHLVPWRFRVVWDNCMYRVSQMQFRCSHIFREGNQVAYALANFGLSSSGLVYWDSIPQF 191
Query: 535 IISLLTDYYVGRVQYRFV 588
++L +G +RF+
Sbjct: 192 FMNLYLQDQLGLPHFRFL 209
>ref|XP_002516681.1| conserved hypothetical protein [Ricinus communis]
gi|223544176|gb|EEF45700.1| conserved hypothetical
protein [Ricinus communis]
Length = 180
Score = 95.9 bits (237), Expect = 1e-17
Identities = 55/144 (38%), Positives = 77/144 (53%)
Frame = +1
Query: 49 LKIQGRPPKDPRIILVPWSLPLPGWIKVNTNGCATGAPGLITAAAVYRTYWGFFCGCFVE 228
L I G P + P ++ V VNT+G A GA G A ++R G+ G F
Sbjct: 34 LGINGSPRRTPAVMFV-----------VNTDGSALGALGPAGAGGLFRNPSGYVMGAFAF 82
Query: 229 LCGTGYAFEAELVVAMRAISYAFQKGWTNLWLESDSTYMVDLFRSRVGSVPWRLLNQWCY 408
GT AF EL A A+ A++ GW +LWLESDS Y+V LFR++ SV W L W
Sbjct: 83 SLGTNCAFFVELNSASFAVCKAWEVGWLHLWLESDSIYVVHLFRTKGTSVLWELRLAWSR 142
Query: 409 SIFLIS*MNFVVTHIYREGNRVAD 480
+ + M+F V++++REGN+ D
Sbjct: 143 YLHFVQQMDFRVSYVFREGNKPTD 166
>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 93.2 bits (230), Expect = 6e-17
Identities = 70/205 (34%), Positives = 93/205 (45%), Gaps = 3/205 (1%)
Frame = +1
Query: 28 DLLCLHRLKIQGRPPKDPRIILVPWSLPLPGWIKVNTNGCATGAPGLITAAAVYRTYWGF 207
D L + R K IILV W P P +KVNT+G G GL ++R G
Sbjct: 991 DSAILEEFSVSPRHRKYKDIILVLWKNPSPPLLKVNTDGSVVG--GLAACGGLFRDSSGS 1048
Query: 208 FCGCFVELCGTGYAFEAELVVAMRAISYAFQKGWTNLWLESDSTYMVDLFRSRVGSVPWR 387
F G F G F AE + + A+ +A GW NLWLESDST + +F S V W
Sbjct: 1049 FLGAFSCNIGLASVFHAETLAFILALEHAAHHGWRNLWLESDSTSALMIF-SNSSLVQWL 1107
Query: 388 LLNQWCYSIFLIS*MNFVVTHIYREGNRVADQLNKL---MCASTWWDAHPADIISLLTDY 558
L N+W + L + + +HI EGNR AD L + + S W + P + L D+
Sbjct: 1108 LRNRWHNAQRL--GIQVISSHILHEGNRCADNLANMGHGIQGSIWLETLPTE---LHLDF 1162
Query: 559 YVGRVQYRFVS*YVEFDTF*SDCMA 633
Y R+ +DTF C A
Sbjct: 1163 YRDRIVNGHT-----YDTFHEACSA 1182
>ref|XP_002304990.2| hypothetical protein POPTR_0004s03265g [Populus trichocarpa]
gi|550340224|gb|EEE85501.2| hypothetical protein
POPTR_0004s03265g [Populus trichocarpa]
Length = 202
Score = 89.0 bits (219), Expect = 1e-15
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 5/172 (2%)
Frame = +1
Query: 82 RIILVPWSLPLPGWIKVNTNGCATGAPGLITAAAVYRTYWGFFCGCFVELCGTGYAFEAE 261
R I V W P GW K+N +G G G + V+R + F + E G + AE
Sbjct: 29 RPIPVSWKKPQIGWTKLNFDGSCKGTAGKASIGGVFRNHEAEFLLGYAEPIGGTTSTIAE 88
Query: 262 LVVAMRAISYAFQKGWTNLWLESDSTYMVDLFRSRVGSVPWRLLNQWCY-SIFLIS*MNF 438
L R + + GW+N+WLE DS +VD+ R Q + ++ + N
Sbjct: 89 LAALRRGLELVLENGWSNVWLEGDSKSLVDIIVKRKQVRCKEAQRQVSHINLIMPELQNC 148
Query: 439 VVTHIYREGNRVADQL----NKLMCASTWWDAHPADIISLLTDYYVGRVQYR 582
VVTH++REGNR AD+L ++L W D P DI+ ++ + G++ +R
Sbjct: 149 VVTHVFREGNRAADKLARIGHQLQKPKIWRDIPPDDILRIVHEDAKGKIVFR 200