BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00016606
         (593 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004302639.1| PREDICTED: RNA polymerase II C-terminal doma...    76   6e-12
ref|XP_002274594.2| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...    74   3e-11
emb|CBI30403.3| unnamed protein product [Vitis vinifera]               74   3e-11
ref|XP_004167060.1| PREDICTED: RNA polymerase II C-terminal doma...    70   5e-10
ref|XP_004147918.1| PREDICTED: RNA polymerase II C-terminal doma...    70   5e-10
ref|XP_002870934.1| hypothetical protein ARALYDRAFT_486948 [Arab...    70   5e-10
ref|NP_001190199.1| RNA polymerase II C-terminal domain phosphat...    69   7e-10
ref|NP_195747.2| RNA polymerase II C-terminal domain phosphatase...    69   7e-10
emb|CAB69855.1| hypothetical protein [Arabidopsis thaliana]            69   7e-10
ref|XP_006481010.1| PREDICTED: RNA polymerase II C-terminal doma...    69   9e-10
ref|XP_006481007.1| PREDICTED: RNA polymerase II C-terminal doma...    69   9e-10
ref|XP_006481006.1| PREDICTED: RNA polymerase II C-terminal doma...    69   9e-10
ref|XP_006429349.1| hypothetical protein CICLE_v10011105mg [Citr...    69   9e-10
ref|XP_006429346.1| hypothetical protein CICLE_v10011105mg [Citr...    69   9e-10
ref|XP_006429344.1| hypothetical protein CICLE_v10011105mg [Citr...    69   9e-10
ref|XP_006398634.1| hypothetical protein EUTSA_v10012754mg [Eutr...    69   1e-09
ref|XP_006373980.1| hypothetical protein POPTR_0016s12200g [Popu...    68   2e-09
ref|XP_006373979.1| hypothetical protein POPTR_0016s12200g [Popu...    68   2e-09
gb|EOY07248.1| RNA polymerase II C-terminal domain phosphatase-l...    68   2e-09
gb|EOY07247.1| RNA polymerase II C-terminal domain phosphatase-l...    68   2e-09

>ref|XP_004302639.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           2-like [Fragaria vesca subsp. vesca]
          Length = 850

 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
 Frame = -1

Query: 485 INHTRIATHRCD-------ISAIYIVLELGMSVPII--YLTGTFVACVCIMQTTFVLLGN 333
           I+H    + RC        IS+  +  +L  S+P+   +L     +C   ++T  VL+GN
Sbjct: 39  IHHISQQSERCPPLSVLQTISSFSVRCKLESSIPVEQPHLINLHASCFYELKTAVVLVGN 98

Query: 332 EEVHLVAMPSKQKKFPCFWCYSVP 261
           EE+HLVAMPSKQKKFPCFWCYSVP
Sbjct: 99  EEIHLVAMPSKQKKFPCFWCYSVP 122


>ref|XP_002274594.2| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 2-like [Vitis vinifera]
          Length = 789

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 9/85 (10%)
 Frame = -1

Query: 485 INHTRIATHRCD-------ISAIYIVLELGMSVPIIY--LTGTFVACVCIMQTTFVLLGN 333
           ++H    + RC        IS+  +  +L  S PI    L     +C   ++T  VL+G+
Sbjct: 39  VHHISPISERCPPLSILHTISSFSVRCKLESSSPIQQPNLINLHASCFHELKTAVVLIGD 98

Query: 332 EEVHLVAMPSKQKKFPCFWCYSVPC 258
           EE+HLVAMPSKQKKFPCFWCYSVPC
Sbjct: 99  EELHLVAMPSKQKKFPCFWCYSVPC 123


>emb|CBI30403.3| unnamed protein product [Vitis vinifera]
          Length = 853

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 9/85 (10%)
 Frame = -1

Query: 485 INHTRIATHRCD-------ISAIYIVLELGMSVPIIY--LTGTFVACVCIMQTTFVLLGN 333
           ++H    + RC        IS+  +  +L  S PI    L     +C   ++T  VL+G+
Sbjct: 39  VHHISPISERCPPLSILHTISSFSVRCKLESSSPIQQPNLINLHASCFHELKTAVVLIGD 98

Query: 332 EEVHLVAMPSKQKKFPCFWCYSVPC 258
           EE+HLVAMPSKQKKFPCFWCYSVPC
Sbjct: 99  EELHLVAMPSKQKKFPCFWCYSVPC 123


>ref|XP_004167060.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           2-like [Cucumis sativus]
          Length = 837

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
 Frame = -1

Query: 449 ISAIYIVLELGMSVPII--YLTGTFVACVCIMQTTFVLLGNEEVHLVAMPSKQKKFPCFW 276
           IS+  +  +L  S+P+   +L     +C   ++T  VL+G+EE+HLVAMPSKQK FPCFW
Sbjct: 58  ISSFSLRCKLQSSLPVEQPHLIQLHYSCFHELKTAIVLVGDEEIHLVAMPSKQKNFPCFW 117

Query: 275 CYSVPC 258
           C++VPC
Sbjct: 118 CFAVPC 123


>ref|XP_004147918.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           2-like [Cucumis sativus]
          Length = 829

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
 Frame = -1

Query: 449 ISAIYIVLELGMSVPII--YLTGTFVACVCIMQTTFVLLGNEEVHLVAMPSKQKKFPCFW 276
           IS+  +  +L  S+P+   +L     +C   ++T  VL+G+EE+HLVAMPSKQK FPCFW
Sbjct: 58  ISSFSLRCKLQSSLPVEQPHLIQLHYSCFHELKTAIVLVGDEEIHLVAMPSKQKNFPCFW 117

Query: 275 CYSVPC 258
           C++VPC
Sbjct: 118 CFAVPC 123


>ref|XP_002870934.1| hypothetical protein ARALYDRAFT_486948 [Arabidopsis lyrata subsp.
           lyrata] gi|297316771|gb|EFH47193.1| hypothetical protein
           ARALYDRAFT_486948 [Arabidopsis lyrata subsp. lyrata]
          Length = 770

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 11/103 (10%)
 Frame = -1

Query: 536 ETSPITLNH*TNIPLDSI--NHTRIATHRCD-------ISAIYIVLELGMSVPIIYLTGT 384
           + + ++ +H    P D I  +H   A  RC        I++  +  +L  S P+      
Sbjct: 21  DVNHVSSSHEFRFPNDEIRIHHLSPAGERCPPLAILQTIASFAVRCKLESSAPVKPQELM 80

Query: 383 FVACVCI--MQTTFVLLGNEEVHLVAMPSKQKKFPCFWCYSVP 261
            +  VC   ++T  VLLG+EE+HLVAMPSK+KKFPCFWC+SVP
Sbjct: 81  HLHAVCFHELKTAVVLLGDEEIHLVAMPSKEKKFPCFWCFSVP 123


>ref|NP_001190199.1| RNA polymerase II C-terminal domain phosphatase-like 2 [Arabidopsis
           thaliana] gi|332002938|gb|AED90321.1| RNA polymerase II
           C-terminal domain phosphatase-like 2 [Arabidopsis
           thaliana]
          Length = 774

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 11/103 (10%)
 Frame = -1

Query: 536 ETSPITLNH*TNIPLDSI--NHTRIATHRCD-------ISAIYIVLELGMSVPIIYLTGT 384
           + + ++ +H    P D I  +H   A  RC        I++  +  +L  S P+      
Sbjct: 21  DVNHVSSSHEFRFPNDEIRIHHLSPAGERCPPLAILQTIASFAVRCKLESSAPVKSQELM 80

Query: 383 FVACVCI--MQTTFVLLGNEEVHLVAMPSKQKKFPCFWCYSVP 261
            +  VC   ++T  V+LG+EE+HLVAMPSK+KKFPCFWC+SVP
Sbjct: 81  HLHAVCFHELKTAVVMLGDEEIHLVAMPSKEKKFPCFWCFSVP 123


>ref|NP_195747.2| RNA polymerase II C-terminal domain phosphatase-like 2 [Arabidopsis
           thaliana] gi|357529528|sp|Q5YDB5.3|CPL2_ARATH RecName:
           Full=RNA polymerase II C-terminal domain
           phosphatase-like 2; Short=FCP-like 2; AltName:
           Full=Carboxyl-terminal phosphatase-like 2; Short=AtCPL2;
           Short=CTD phosphatase-like 2 gi|49175307|gb|AAT52023.1|
           C-terminal domain phosphatase-like 2 [Arabidopsis
           thaliana] gi|332002937|gb|AED90320.1| RNA polymerase II
           C-terminal domain phosphatase-like 2 [Arabidopsis
           thaliana]
          Length = 770

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 11/103 (10%)
 Frame = -1

Query: 536 ETSPITLNH*TNIPLDSI--NHTRIATHRCD-------ISAIYIVLELGMSVPIIYLTGT 384
           + + ++ +H    P D I  +H   A  RC        I++  +  +L  S P+      
Sbjct: 21  DVNHVSSSHEFRFPNDEIRIHHLSPAGERCPPLAILQTIASFAVRCKLESSAPVKSQELM 80

Query: 383 FVACVCI--MQTTFVLLGNEEVHLVAMPSKQKKFPCFWCYSVP 261
            +  VC   ++T  V+LG+EE+HLVAMPSK+KKFPCFWC+SVP
Sbjct: 81  HLHAVCFHELKTAVVMLGDEEIHLVAMPSKEKKFPCFWCFSVP 123


>emb|CAB69855.1| hypothetical protein [Arabidopsis thaliana]
          Length = 771

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 11/103 (10%)
 Frame = -1

Query: 536 ETSPITLNH*TNIPLDSI--NHTRIATHRCD-------ISAIYIVLELGMSVPIIYLTGT 384
           + + ++ +H    P D I  +H   A  RC        I++  +  +L  S P+      
Sbjct: 21  DVNHVSSSHEFRFPNDEIRIHHLSPAGERCPPLAILQTIASFAVRCKLESSAPVKSQELM 80

Query: 383 FVACVCI--MQTTFVLLGNEEVHLVAMPSKQKKFPCFWCYSVP 261
            +  VC   ++T  V+LG+EE+HLVAMPSK+KKFPCFWC+SVP
Sbjct: 81  HLHAVCFHELKTAVVMLGDEEIHLVAMPSKEKKFPCFWCFSVP 123


>ref|XP_006481010.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           2-like isoform X5 [Citrus sinensis]
          Length = 770

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
 Frame = -1

Query: 485 INHTRIATHRC-------DISAIYIVLELGMSVPII--YLTGTFVACVCIMQTTFVLLGN 333
           I H   ++ RC        IS+  +  +L  S P+   +L     +C    +T  V++G+
Sbjct: 39  IRHISPSSERCIPLSILHTISSFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGD 98

Query: 332 EEVHLVAMPSKQKKFPCFWCYSV 264
           EE+HLVAMPSKQKKFPCFWCYSV
Sbjct: 99  EEIHLVAMPSKQKKFPCFWCYSV 121


>ref|XP_006481007.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           2-like isoform X2 [Citrus sinensis]
           gi|568854805|ref|XP_006481008.1| PREDICTED: RNA
           polymerase II C-terminal domain phosphatase-like 2-like
           isoform X3 [Citrus sinensis]
           gi|568854807|ref|XP_006481009.1| PREDICTED: RNA
           polymerase II C-terminal domain phosphatase-like 2-like
           isoform X4 [Citrus sinensis]
          Length = 771

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
 Frame = -1

Query: 485 INHTRIATHRC-------DISAIYIVLELGMSVPII--YLTGTFVACVCIMQTTFVLLGN 333
           I H   ++ RC        IS+  +  +L  S P+   +L     +C    +T  V++G+
Sbjct: 39  IRHISPSSERCIPLSILHTISSFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGD 98

Query: 332 EEVHLVAMPSKQKKFPCFWCYSV 264
           EE+HLVAMPSKQKKFPCFWCYSV
Sbjct: 99  EEIHLVAMPSKQKKFPCFWCYSV 121


>ref|XP_006481006.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           2-like isoform X1 [Citrus sinensis]
          Length = 788

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
 Frame = -1

Query: 485 INHTRIATHRC-------DISAIYIVLELGMSVPII--YLTGTFVACVCIMQTTFVLLGN 333
           I H   ++ RC        IS+  +  +L  S P+   +L     +C    +T  V++G+
Sbjct: 39  IRHISPSSERCIPLSILHTISSFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGD 98

Query: 332 EEVHLVAMPSKQKKFPCFWCYSV 264
           EE+HLVAMPSKQKKFPCFWCYSV
Sbjct: 99  EEIHLVAMPSKQKKFPCFWCYSV 121


>ref|XP_006429349.1| hypothetical protein CICLE_v10011105mg [Citrus clementina]
           gi|557531406|gb|ESR42589.1| hypothetical protein
           CICLE_v10011105mg [Citrus clementina]
          Length = 788

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
 Frame = -1

Query: 485 INHTRIATHRC-------DISAIYIVLELGMSVPII--YLTGTFVACVCIMQTTFVLLGN 333
           I H   ++ RC        IS+  +  +L  S P+   +L     +C    +T  V++G+
Sbjct: 39  IRHISPSSERCIPLSILHTISSFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGD 98

Query: 332 EEVHLVAMPSKQKKFPCFWCYSV 264
           EE+HLVAMPSKQKKFPCFWCYSV
Sbjct: 99  EEIHLVAMPSKQKKFPCFWCYSV 121


>ref|XP_006429346.1| hypothetical protein CICLE_v10011105mg [Citrus clementina]
           gi|567873515|ref|XP_006429347.1| hypothetical protein
           CICLE_v10011105mg [Citrus clementina]
           gi|567873517|ref|XP_006429348.1| hypothetical protein
           CICLE_v10011105mg [Citrus clementina]
           gi|557531403|gb|ESR42586.1| hypothetical protein
           CICLE_v10011105mg [Citrus clementina]
           gi|557531404|gb|ESR42587.1| hypothetical protein
           CICLE_v10011105mg [Citrus clementina]
           gi|557531405|gb|ESR42588.1| hypothetical protein
           CICLE_v10011105mg [Citrus clementina]
          Length = 771

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
 Frame = -1

Query: 485 INHTRIATHRC-------DISAIYIVLELGMSVPII--YLTGTFVACVCIMQTTFVLLGN 333
           I H   ++ RC        IS+  +  +L  S P+   +L     +C    +T  V++G+
Sbjct: 39  IRHISPSSERCIPLSILHTISSFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGD 98

Query: 332 EEVHLVAMPSKQKKFPCFWCYSV 264
           EE+HLVAMPSKQKKFPCFWCYSV
Sbjct: 99  EEIHLVAMPSKQKKFPCFWCYSV 121


>ref|XP_006429344.1| hypothetical protein CICLE_v10011105mg [Citrus clementina]
           gi|567873511|ref|XP_006429345.1| hypothetical protein
           CICLE_v10011105mg [Citrus clementina]
           gi|557531401|gb|ESR42584.1| hypothetical protein
           CICLE_v10011105mg [Citrus clementina]
           gi|557531402|gb|ESR42585.1| hypothetical protein
           CICLE_v10011105mg [Citrus clementina]
          Length = 755

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
 Frame = -1

Query: 485 INHTRIATHRC-------DISAIYIVLELGMSVPII--YLTGTFVACVCIMQTTFVLLGN 333
           I H   ++ RC        IS+  +  +L  S P+   +L     +C    +T  V++G+
Sbjct: 39  IRHISPSSERCIPLSILHTISSFSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGD 98

Query: 332 EEVHLVAMPSKQKKFPCFWCYSV 264
           EE+HLVAMPSKQKKFPCFWCYSV
Sbjct: 99  EEIHLVAMPSKQKKFPCFWCYSV 121


>ref|XP_006398634.1| hypothetical protein EUTSA_v10012754mg [Eutrema salsugineum]
           gi|557099724|gb|ESQ40087.1| hypothetical protein
           EUTSA_v10012754mg [Eutrema salsugineum]
          Length = 761

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
 Frame = -1

Query: 485 INHTRIATHRCD-------ISAIYIVLELGMSVPIIYLTGTFVACVCI--MQTTFVLLGN 333
           I+H   A  RC        I++  +  +L  S P+       +  VC   ++T  VLLG+
Sbjct: 40  IHHVSPAGERCPPLAILQTIASFAVRCKLESSAPVKPPELMHLHAVCFHELKTAVVLLGD 99

Query: 332 EEVHLVAMPSKQKKFPCFWCYSVP 261
           EE+HLVAMPSK+KKFPCFWC+SVP
Sbjct: 100 EEIHLVAMPSKEKKFPCFWCFSVP 123


>ref|XP_006373980.1| hypothetical protein POPTR_0016s12200g [Populus trichocarpa]
           gi|550321331|gb|ERP51777.1| hypothetical protein
           POPTR_0016s12200g [Populus trichocarpa]
          Length = 830

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
 Frame = -1

Query: 485 INHTRIATHRCD-------ISAIYIVLELGMSVPI--IYLTGTFVACVCIMQTTFVLLGN 333
           I+H    + RC        IS   +  +L  S P+   +L     +C   ++T  VL+G+
Sbjct: 39  IHHISQQSERCPPLSILQTISPFSVRCKLESSSPMEQSHLINLHASCFHEVKTAVVLIGD 98

Query: 332 EEVHLVAMPSKQKKFPCFWCYSVP 261
           EE+HLVAMPSKQKKFPCFWC++VP
Sbjct: 99  EEIHLVAMPSKQKKFPCFWCFAVP 122


>ref|XP_006373979.1| hypothetical protein POPTR_0016s12200g [Populus trichocarpa]
           gi|550321330|gb|ERP51776.1| hypothetical protein
           POPTR_0016s12200g [Populus trichocarpa]
          Length = 765

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
 Frame = -1

Query: 485 INHTRIATHRCD-------ISAIYIVLELGMSVPI--IYLTGTFVACVCIMQTTFVLLGN 333
           I+H    + RC        IS   +  +L  S P+   +L     +C   ++T  VL+G+
Sbjct: 39  IHHISQQSERCPPLSILQTISPFSVRCKLESSSPMEQSHLINLHASCFHEVKTAVVLIGD 98

Query: 332 EEVHLVAMPSKQKKFPCFWCYSVP 261
           EE+HLVAMPSKQKKFPCFWC++VP
Sbjct: 99  EEIHLVAMPSKQKKFPCFWCFAVP 122


>gb|EOY07248.1| RNA polymerase II C-terminal domain phosphatase-like 2 isoform 5,
           partial [Theobroma cacao]
          Length = 719

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
 Frame = -1

Query: 578 PIHHIKLSSPNHSPETSPITLNH*TNIPLDSINHTRIATHRCDISAIYIVLELGMSVPII 399
           P+       PN+      I+      IPL S+ HT        +S+  +  +L  S P+ 
Sbjct: 24  PVSDTNFQFPNNEIRIHHISPPSERCIPL-SVLHT--------VSSFPVRCKLESSSPVE 74

Query: 398 --YLTGTFVACVCIMQTTFVLLGNEEVHLVAMPSKQKKFPCFWCYSVP 261
             +L     +C   ++T  VL+G+EEVHLV MPSKQKKFPCFWC+SVP
Sbjct: 75  QPHLIHLHASCFYELKTAVVLVGDEEVHLVPMPSKQKKFPCFWCFSVP 122


>gb|EOY07247.1| RNA polymerase II C-terminal domain phosphatase-like 2 isoform 4
           [Theobroma cacao]
          Length = 812

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
 Frame = -1

Query: 578 PIHHIKLSSPNHSPETSPITLNH*TNIPLDSINHTRIATHRCDISAIYIVLELGMSVPII 399
           P+       PN+      I+      IPL S+ HT        +S+  +  +L  S P+ 
Sbjct: 24  PVSDTNFQFPNNEIRIHHISPPSERCIPL-SVLHT--------VSSFPVRCKLESSSPVE 74

Query: 398 --YLTGTFVACVCIMQTTFVLLGNEEVHLVAMPSKQKKFPCFWCYSVP 261
             +L     +C   ++T  VL+G+EEVHLV MPSKQKKFPCFWC+SVP
Sbjct: 75  QPHLIHLHASCFYELKTAVVLVGDEEVHLVPMPSKQKKFPCFWCFSVP 122