BLASTX nr result
ID: Rehmannia25_contig00016539
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00016539
(353 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250243.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 153 3e-35
ref|XP_002534127.1| ubiquitin ligase protein cop1, putative [Ric... 146 2e-33
ref|XP_002331573.1| predicted protein [Populus trichocarpa] 145 4e-33
ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-... 145 7e-33
ref|XP_002321154.1| photoregulatory zinc-finger protein COP1 [Po... 144 1e-32
gb|EMJ11663.1| hypothetical protein PRUPE_ppa002554m1g, partial ... 142 5e-32
ref|XP_004164350.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 142 6e-32
ref|XP_006383838.1| hypothetical protein POPTR_0004s00430g [Popu... 141 8e-32
gb|EOY28833.1| Transducin/WD40 repeat-like superfamily protein i... 139 3e-31
gb|EOY28832.1| Transducin/WD40 repeat-like superfamily protein i... 139 3e-31
gb|EOX93348.1| Transducin/WD40 repeat-like superfamily protein i... 139 4e-31
gb|EOX93347.1| Transducin/WD40 repeat-like superfamily protein i... 139 4e-31
gb|EOX93345.1| Transducin/WD40 repeat-like superfamily protein i... 139 4e-31
gb|EOX93344.1| Transducin/WD40 repeat-like superfamily protein i... 139 4e-31
ref|XP_004172521.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 139 5e-31
ref|XP_004143233.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 139 5e-31
gb|EXB72970.1| E3 ubiquitin-protein ligase COP1 [Morus notabilis] 137 1e-30
gb|AAG31173.1| COP1 [Ipomoea nil] 137 1e-30
ref|XP_006829490.1| hypothetical protein AMTR_s00074p00101590 [A... 137 1e-30
gb|AAK81856.1|AF394913_1 photoregulatory zinc-finger protein COP... 137 1e-30
>ref|XP_004250243.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Solanum
lycopersicum]
Length = 672
Score = 153 bits (386), Expect = 3e-35
Identities = 73/111 (65%), Positives = 81/111 (72%)
Frame = +1
Query: 19 GGETTSFGALVPTVKSEPNSSAEXXXXXXXXXXXXLEASEKEQEVDKDMLCPICMQIIKD 198
GGE G LVPTV + S+ + +E+EVDKD+LCPICMQIIKD
Sbjct: 3 GGEGNLVGVLVPTVNAGETSAPAAGTEV-------VVVKTEEEEVDKDILCPICMQIIKD 55
Query: 199 AFLTACGHSFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKLLMKTS 351
AFLTACGHSFCYMCI THL+NKSDCPCCSH+LT NHLYPNFLLNKLLMK S
Sbjct: 56 AFLTACGHSFCYMCIVTHLQNKSDCPCCSHYLTTNHLYPNFLLNKLLMKKS 106
>ref|XP_002534127.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
gi|223525812|gb|EEF28255.1| ubiquitin ligase protein
cop1, putative [Ricinus communis]
Length = 677
Score = 146 bits (369), Expect = 2e-33
Identities = 70/112 (62%), Positives = 79/112 (70%), Gaps = 3/112 (2%)
Frame = +1
Query: 25 ETTSFGALVPTVKSEPNSSAEXXXXXXXXXXXXLEASEKE---QEVDKDMLCPICMQIIK 195
E S GA+VP VK EP S+ A+E+E E++KD LCPICMQIIK
Sbjct: 2 EEVSTGAIVPAVKLEPRPSSSSVAVAAAVSSEPAAAAEEEAGLSELEKDFLCPICMQIIK 61
Query: 196 DAFLTACGHSFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKLLMKTS 351
DAFLTACGHSFCYMCI THLRNKSDCPCC+H+LT N L+PNFLL KLL K S
Sbjct: 62 DAFLTACGHSFCYMCIITHLRNKSDCPCCTHYLTTNQLFPNFLLQKLLKKAS 113
>ref|XP_002331573.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 145 bits (367), Expect = 4e-33
Identities = 69/111 (62%), Positives = 83/111 (74%)
Frame = +1
Query: 16 MGGETTSFGALVPTVKSEPNSSAEXXXXXXXXXXXXLEASEKEQEVDKDMLCPICMQIIK 195
MGGE+ S GALVP+V SE +S + +E+DKD+LCPICMQIIK
Sbjct: 1 MGGES-SMGALVPSVNSEATTS---------------KMQPPTEELDKDILCPICMQIIK 44
Query: 196 DAFLTACGHSFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKLLMKT 348
DAFLT+CGHSFCY+CI THLRNK+DCPCCSH+LT NH++PNFLLNKLL +T
Sbjct: 45 DAFLTSCGHSFCYLCITTHLRNKNDCPCCSHYLTNNHIFPNFLLNKLLERT 95
>ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
Length = 687
Score = 145 bits (365), Expect = 7e-33
Identities = 73/121 (60%), Positives = 80/121 (66%), Gaps = 14/121 (11%)
Frame = +1
Query: 31 TSFGALVPTVKS-EPNSSAEXXXXXXXXXXXXLEASEKE-------------QEVDKDML 168
+S GALVPTVK EP S+ A E++ EVDKD+L
Sbjct: 4 SSMGALVPTVKPPEPAGSSSEAVTAPPPPPPPEPAPEEQAEVPAVEATETGVSEVDKDLL 63
Query: 169 CPICMQIIKDAFLTACGHSFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKLLMKT 348
CPICMQIIKDAFLTACGHSFCYMCI THL NK+DCPCC HFLT NHL+PNFLLNK L KT
Sbjct: 64 CPICMQIIKDAFLTACGHSFCYMCIVTHLNNKNDCPCCGHFLTTNHLFPNFLLNKFLRKT 123
Query: 349 S 351
S
Sbjct: 124 S 124
>ref|XP_002321154.1| photoregulatory zinc-finger protein COP1 [Populus trichocarpa]
gi|222861927|gb|EEE99469.1| photoregulatory zinc-finger
protein COP1 [Populus trichocarpa]
Length = 672
Score = 144 bits (363), Expect = 1e-32
Identities = 68/109 (62%), Positives = 76/109 (69%)
Frame = +1
Query: 25 ETTSFGALVPTVKSEPNSSAEXXXXXXXXXXXXLEASEKEQEVDKDMLCPICMQIIKDAF 204
E S GA+VP VK EP S ++E E E++KD LCPICMQIIKDAF
Sbjct: 2 EEVSTGAIVPAVKPEPKPSTSTAAAVASPEPSSAPSAE-EAELEKDFLCPICMQIIKDAF 60
Query: 205 LTACGHSFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKLLMKTS 351
LT CGHSFCYMCI THLRNK+DCPCCSH+LT N L+PNFLL KLL K S
Sbjct: 61 LTVCGHSFCYMCITTHLRNKNDCPCCSHYLTTNQLFPNFLLQKLLKKAS 109
>gb|EMJ11663.1| hypothetical protein PRUPE_ppa002554m1g, partial [Prunus persica]
Length = 386
Score = 142 bits (358), Expect = 5e-32
Identities = 69/110 (62%), Positives = 77/110 (70%), Gaps = 1/110 (0%)
Frame = +1
Query: 25 ETTSFGALVPTVKSEPNSSAEXXXXXXXXXXXXLEASEKE-QEVDKDMLCPICMQIIKDA 201
E S GALVP VK EP S+ EK EVDKD+LCPICMQ++KDA
Sbjct: 2 EECSTGALVPAVKPEPKPSSIEASADPGSNDVDRPTHEKGLMEVDKDLLCPICMQLVKDA 61
Query: 202 FLTACGHSFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKLLMKTS 351
FLTACGHSFCYMCI THLRNKSDCPCC+ FL+ N L+PNFLL+KLL K S
Sbjct: 62 FLTACGHSFCYMCIITHLRNKSDCPCCAQFLSTNQLFPNFLLDKLLKKAS 111
>ref|XP_004164350.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 670
Score = 142 bits (357), Expect = 6e-32
Identities = 69/112 (61%), Positives = 80/112 (71%)
Frame = +1
Query: 16 MGGETTSFGALVPTVKSEPNSSAEXXXXXXXXXXXXLEASEKEQEVDKDMLCPICMQIIK 195
MGG S GALVPTVK+EP++ + ++DKDMLCPICMQIIK
Sbjct: 1 MGGG--SIGALVPTVKTEPSTLDSTPSSSPLYRP----SHSNTDDLDKDMLCPICMQIIK 54
Query: 196 DAFLTACGHSFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKLLMKTS 351
DAFLT CGHSFCYMCI THLRNKSDCPCC+HFL +N ++PN LL+KLL KTS
Sbjct: 55 DAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTS 106
>ref|XP_006383838.1| hypothetical protein POPTR_0004s00430g [Populus trichocarpa]
gi|550339983|gb|ERP61635.1| hypothetical protein
POPTR_0004s00430g [Populus trichocarpa]
Length = 406
Score = 141 bits (356), Expect = 8e-32
Identities = 66/107 (61%), Positives = 80/107 (74%)
Frame = +1
Query: 16 MGGETTSFGALVPTVKSEPNSSAEXXXXXXXXXXXXLEASEKEQEVDKDMLCPICMQIIK 195
MGGE+ S GALVP+V SE +S + +E+DKD+LCPICMQIIK
Sbjct: 18 MGGES-SMGALVPSVNSEATTS---------------KMQPPTEELDKDILCPICMQIIK 61
Query: 196 DAFLTACGHSFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKL 336
DAFLT+CGHSFCY+CI THLRNK+DCPCCSH+LT NH++PNFLLNK+
Sbjct: 62 DAFLTSCGHSFCYLCITTHLRNKNDCPCCSHYLTNNHIFPNFLLNKI 108
>gb|EOY28833.1| Transducin/WD40 repeat-like superfamily protein isoform 2
[Theobroma cacao]
Length = 662
Score = 139 bits (351), Expect = 3e-31
Identities = 60/75 (80%), Positives = 67/75 (89%)
Frame = +1
Query: 127 EASEKEQEVDKDMLCPICMQIIKDAFLTACGHSFCYMCIATHLRNKSDCPCCSHFLTANH 306
E + E + DKDMLCPICMQ+IKDAFLTACGHSFCYMCI THLRNKSDCPCCSH+LT +H
Sbjct: 64 EEAALEADADKDMLCPICMQLIKDAFLTACGHSFCYMCILTHLRNKSDCPCCSHYLTNSH 123
Query: 307 LYPNFLLNKLLMKTS 351
++PNFLLNKLL KTS
Sbjct: 124 IFPNFLLNKLLKKTS 138
>gb|EOY28832.1| Transducin/WD40 repeat-like superfamily protein isoform 1
[Theobroma cacao]
Length = 701
Score = 139 bits (351), Expect = 3e-31
Identities = 60/75 (80%), Positives = 67/75 (89%)
Frame = +1
Query: 127 EASEKEQEVDKDMLCPICMQIIKDAFLTACGHSFCYMCIATHLRNKSDCPCCSHFLTANH 306
E + E + DKDMLCPICMQ+IKDAFLTACGHSFCYMCI THLRNKSDCPCCSH+LT +H
Sbjct: 64 EEAALEADADKDMLCPICMQLIKDAFLTACGHSFCYMCILTHLRNKSDCPCCSHYLTNSH 123
Query: 307 LYPNFLLNKLLMKTS 351
++PNFLLNKLL KTS
Sbjct: 124 IFPNFLLNKLLKKTS 138
>gb|EOX93348.1| Transducin/WD40 repeat-like superfamily protein isoform 5
[Theobroma cacao]
Length = 643
Score = 139 bits (350), Expect = 4e-31
Identities = 68/103 (66%), Positives = 76/103 (73%), Gaps = 2/103 (1%)
Frame = +1
Query: 49 VPTVK--SEPNSSAEXXXXXXXXXXXXLEASEKEQEVDKDMLCPICMQIIKDAFLTACGH 222
VP VK S+P+S E A+ + EVDKD+LCPICMQIIKDAFLT+CGH
Sbjct: 12 VPAVKPDSKPSSFEEVPPLLEAATDVTAAAAVEVAEVDKDLLCPICMQIIKDAFLTSCGH 71
Query: 223 SFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKLLMKTS 351
SFCYMCI THLRNKSDCPCCS FLT N L+PNFLL+KLL KTS
Sbjct: 72 SFCYMCIITHLRNKSDCPCCSQFLTNNQLFPNFLLDKLLKKTS 114
>gb|EOX93347.1| Transducin/WD40 repeat-like superfamily protein isoform 4
[Theobroma cacao]
Length = 635
Score = 139 bits (350), Expect = 4e-31
Identities = 68/103 (66%), Positives = 76/103 (73%), Gaps = 2/103 (1%)
Frame = +1
Query: 49 VPTVK--SEPNSSAEXXXXXXXXXXXXLEASEKEQEVDKDMLCPICMQIIKDAFLTACGH 222
VP VK S+P+S E A+ + EVDKD+LCPICMQIIKDAFLT+CGH
Sbjct: 12 VPAVKPDSKPSSFEEVPPLLEAATDVTAAAAVEVAEVDKDLLCPICMQIIKDAFLTSCGH 71
Query: 223 SFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKLLMKTS 351
SFCYMCI THLRNKSDCPCCS FLT N L+PNFLL+KLL KTS
Sbjct: 72 SFCYMCIITHLRNKSDCPCCSQFLTNNQLFPNFLLDKLLKKTS 114
>gb|EOX93345.1| Transducin/WD40 repeat-like superfamily protein isoform 2
[Theobroma cacao]
Length = 694
Score = 139 bits (350), Expect = 4e-31
Identities = 68/103 (66%), Positives = 76/103 (73%), Gaps = 2/103 (1%)
Frame = +1
Query: 49 VPTVK--SEPNSSAEXXXXXXXXXXXXLEASEKEQEVDKDMLCPICMQIIKDAFLTACGH 222
VP VK S+P+S E A+ + EVDKD+LCPICMQIIKDAFLT+CGH
Sbjct: 12 VPAVKPDSKPSSFEEVPPLLEAATDVTAAAAVEVAEVDKDLLCPICMQIIKDAFLTSCGH 71
Query: 223 SFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKLLMKTS 351
SFCYMCI THLRNKSDCPCCS FLT N L+PNFLL+KLL KTS
Sbjct: 72 SFCYMCIITHLRNKSDCPCCSQFLTNNQLFPNFLLDKLLKKTS 114
>gb|EOX93344.1| Transducin/WD40 repeat-like superfamily protein isoform 1
[Theobroma cacao]
Length = 679
Score = 139 bits (350), Expect = 4e-31
Identities = 68/103 (66%), Positives = 76/103 (73%), Gaps = 2/103 (1%)
Frame = +1
Query: 49 VPTVK--SEPNSSAEXXXXXXXXXXXXLEASEKEQEVDKDMLCPICMQIIKDAFLTACGH 222
VP VK S+P+S E A+ + EVDKD+LCPICMQIIKDAFLT+CGH
Sbjct: 12 VPAVKPDSKPSSFEEVPPLLEAATDVTAAAAVEVAEVDKDLLCPICMQIIKDAFLTSCGH 71
Query: 223 SFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKLLMKTS 351
SFCYMCI THLRNKSDCPCCS FLT N L+PNFLL+KLL KTS
Sbjct: 72 SFCYMCIITHLRNKSDCPCCSQFLTNNQLFPNFLLDKLLKKTS 114
>ref|XP_004172521.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 191
Score = 139 bits (349), Expect = 5e-31
Identities = 68/107 (63%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Frame = +1
Query: 34 SFGALVPTVKSEPNSSAEXXXXXXXXXXXXL-EASEKEQEVDKDMLCPICMQIIKDAFLT 210
S GALVP VK+EP SS+ L E ++DKD LCPICMQII+DAFLT
Sbjct: 5 STGALVPAVKTEPVSSSISAPSIPDCSLAELGTVFEASAQLDKDFLCPICMQIIRDAFLT 64
Query: 211 ACGHSFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKLLMKTS 351
ACGHSFCYMCI THLRNKSDCPCC+ LT++ L+PNFLL+KLL KTS
Sbjct: 65 ACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTS 111
>ref|XP_004143233.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 675
Score = 139 bits (349), Expect = 5e-31
Identities = 68/107 (63%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
Frame = +1
Query: 34 SFGALVPTVKSEPNSSAEXXXXXXXXXXXXL-EASEKEQEVDKDMLCPICMQIIKDAFLT 210
S GALVP VK+EP SS+ L E ++DKD LCPICMQII+DAFLT
Sbjct: 5 STGALVPAVKTEPVSSSISAPSIPDCSLAELGTVFEASAQLDKDFLCPICMQIIRDAFLT 64
Query: 211 ACGHSFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKLLMKTS 351
ACGHSFCYMCI THLRNKSDCPCC+ LT++ L+PNFLL+KLL KTS
Sbjct: 65 ACGHSFCYMCIITHLRNKSDCPCCAQHLTSDQLFPNFLLDKLLKKTS 111
>gb|EXB72970.1| E3 ubiquitin-protein ligase COP1 [Morus notabilis]
Length = 682
Score = 137 bits (346), Expect = 1e-30
Identities = 69/115 (60%), Positives = 74/115 (64%), Gaps = 7/115 (6%)
Frame = +1
Query: 25 ETTSFGALVPTVKSEPNSSAEXXXXXXXXXXXXL-------EASEKEQEVDKDMLCPICM 183
+ S GALVP VK E +SA + EVDKD LCPICM
Sbjct: 2 DEVSSGALVPAVKPESRTSASVAGAASSSQDPLAGDAAAAAAVAAGATEVDKDFLCPICM 61
Query: 184 QIIKDAFLTACGHSFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKLLMKT 348
Q IKDAFLTACGHSFCYMCI THLRNKSDCPCCSHFLT L+PNFLL+KLL KT
Sbjct: 62 QTIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSHFLTTKQLFPNFLLDKLLKKT 116
>gb|AAG31173.1| COP1 [Ipomoea nil]
Length = 677
Score = 137 bits (346), Expect = 1e-30
Identities = 68/114 (59%), Positives = 80/114 (70%), Gaps = 4/114 (3%)
Frame = +1
Query: 22 GETTSFGALVPTVKS----EPNSSAEXXXXXXXXXXXXLEASEKEQEVDKDMLCPICMQI 189
GE++ GA+VP VK+ EP+ S S E E+D+++LCPICMQI
Sbjct: 10 GESSMVGAVVPAVKARNAEEPSISHRDEATP----------SGMEPELDRELLCPICMQI 59
Query: 190 IKDAFLTACGHSFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKLLMKTS 351
IKDAFLT+CGHSFCYMCI THL NKSDCPCCSH+LT LYPNFLL+KLL KTS
Sbjct: 60 IKDAFLTSCGHSFCYMCIVTHLHNKSDCPCCSHYLTTAQLYPNFLLDKLLKKTS 113
>ref|XP_006829490.1| hypothetical protein AMTR_s00074p00101590 [Amborella trichopoda]
gi|548834974|gb|ERM96906.1| hypothetical protein
AMTR_s00074p00101590 [Amborella trichopoda]
Length = 686
Score = 137 bits (345), Expect = 1e-30
Identities = 69/111 (62%), Positives = 76/111 (68%), Gaps = 3/111 (2%)
Frame = +1
Query: 28 TTSFGALVPTVKSEPNS---SAEXXXXXXXXXXXXLEASEKEQEVDKDMLCPICMQIIKD 198
+T+ GALVP+VK E S SA + EVDKD LCPICMQ+I+D
Sbjct: 10 STAGGALVPSVKGEQRSGSASAPEGDEGLGVGSGPGAGAGLGVEVDKDFLCPICMQMIRD 69
Query: 199 AFLTACGHSFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKLLMKTS 351
AFLTACGHSFCYMCI THL NKSDCPCC FLT N L+PNFLLNKLL KTS
Sbjct: 70 AFLTACGHSFCYMCIVTHLNNKSDCPCCGRFLTNNQLFPNFLLNKLLKKTS 120
>gb|AAK81856.1|AF394913_1 photoregulatory zinc-finger protein COP1 [Rosa hybrid cultivar]
Length = 662
Score = 137 bits (345), Expect = 1e-30
Identities = 69/110 (62%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
Frame = +1
Query: 25 ETTSFGALVPTVKSEPN-SSAEXXXXXXXXXXXXLEASEKEQEVDKDMLCPICMQIIKDA 201
E S GALVP VK EP SS L + EVDKD+LCPICMQI+KDA
Sbjct: 2 EECSTGALVPAVKVEPILSSIGGSVDPCSSDLGRLTEEKGMSEVDKDLLCPICMQIVKDA 61
Query: 202 FLTACGHSFCYMCIATHLRNKSDCPCCSHFLTANHLYPNFLLNKLLMKTS 351
FLTACGHSFCYMCI THL NKSDCPCC+ L+ N L+PNFLL+KLL KTS
Sbjct: 62 FLTACGHSFCYMCIITHLSNKSDCPCCAQSLSKNQLFPNFLLDKLLKKTS 111