BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00016462
         (406 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...    72   7e-11
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c...    72   7e-11
ref|XP_004246655.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...    67   3e-09
ref|NP_001275094.1| single-stranded DNA binding protein precurso...    66   4e-09
ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    64   2e-08
emb|CBI32742.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    64   2e-08
ref|XP_004497514.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    63   3e-08
gb|EPS60671.1| hypothetical protein M569_14131, partial [Genlise...    62   8e-08
gb|ACJ85252.1| unknown [Medicago truncatula]                           62   8e-08
ref|XP_003590481.1| 30 kDa ribonucleoprotein [Medicago truncatul...    62   8e-08
ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th...    62   1e-07
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]     62   1e-07
gb|AFK37653.1| unknown [Lotus japonicus]                               61   2e-07
ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...    60   2e-07
ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri...    60   2e-07
ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...    60   3e-07
ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Caps...    60   4e-07
ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arab...    60   4e-07
ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarp...    60   4e-07

>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
           Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
           29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 34/39 (87%), Positives = 37/39 (94%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQ 119
           FVTYSS EEVNNAIE+LDG DLNGR+IRVSPAEARPPR+
Sbjct: 233 FVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRR 271


>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
           RNA binding protein 30 [Nicotiana plumbaginifolia]
          Length = 279

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 34/39 (87%), Positives = 37/39 (94%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQ 119
           FVTYSS EEVNNAIE+LDG DLNGR+IRVSPAEARPPR+
Sbjct: 239 FVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRR 277


>ref|XP_004246655.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Solanum
           lycopersicum]
          Length = 290

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQ 119
           FVTYSS +EVN+AIE+LDG DL GR+IRVSPAEARPPR+
Sbjct: 250 FVTYSSAQEVNDAIESLDGVDLGGRAIRVSPAEARPPRR 288


>ref|NP_001275094.1| single-stranded DNA binding protein precursor [Solanum tuberosum]
           gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA
           binding protein precursor [Solanum tuberosum]
          Length = 289

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQ 119
           FVTYSS +EVN+AIE+LDG DL GR+IRVSPAEARPPR+
Sbjct: 249 FVTYSSAKEVNDAIESLDGVDLGGRAIRVSPAEARPPRR 287


>ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 2 [Vitis
           vinifera]
          Length = 254

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQY 122
           FVTY+S EEVN AIE+LDG DLNGRSIRV+ AEARP RQ+
Sbjct: 215 FVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPRRQF 254


>emb|CBI32742.3| unnamed protein product [Vitis vinifera]
          Length = 127

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQY 122
           FVTY+S EEVN AIE+LDG DLNGRSIRV+ AEARP RQ+
Sbjct: 88  FVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPRRQF 127


>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQY 122
           FVTY+S EEVN AIE+LDG DLNGRSIRV+ AEARP RQ+
Sbjct: 249 FVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPRRQF 288


>ref|XP_004497514.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like isoform X1
           [Cicer arietinum]
          Length = 284

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQY 122
           FVT+SSP+EVN+AI++LDG DLNGR+IRVS A+ RP RQ+
Sbjct: 245 FVTFSSPDEVNSAIQSLDGVDLNGRAIRVSTADTRPKRQF 284


>gb|EPS60671.1| hypothetical protein M569_14131, partial [Genlisea aurea]
          Length = 213

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/40 (75%), Positives = 32/40 (80%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQY 122
           FVTY S EEVNNAI +LDG DLNGR IRVS AE+RP R Y
Sbjct: 174 FVTYGSREEVNNAIRSLDGTDLNGRPIRVSAAESRPRRDY 213


>gb|ACJ85252.1| unknown [Medicago truncatula]
          Length = 280

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQY 122
           FVT+SS +EV++AI  LDGADLNGR+IRVSPA++RP RQ+
Sbjct: 241 FVTFSSADEVDSAIRTLDGADLNGRAIRVSPADSRPKRQF 280


>ref|XP_003590481.1| 30 kDa ribonucleoprotein [Medicago truncatula]
           gi|355479529|gb|AES60732.1| 30 kDa ribonucleoprotein
           [Medicago truncatula] gi|388503166|gb|AFK39649.1|
           unknown [Medicago truncatula]
          Length = 280

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQY 122
           FVT+SS +EV++AI  LDGADLNGR+IRVSPA++RP RQ+
Sbjct: 241 FVTFSSADEVDSAIRTLDGADLNGRAIRVSPADSRPKRQF 280


>ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana]
           gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
           Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
           Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
           RNA-binding protein [Arabidopsis thaliana]
           gi|4056477|gb|AAC98043.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
           At2g37220/F3G5.1 [Arabidopsis thaliana]
           gi|16323482|gb|AAL15235.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|330254275|gb|AEC09369.1| chloroplast RNA binding
           protein [Arabidopsis thaliana]
          Length = 289

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQ 119
           FVTY S +EV NAI++LDGADL+GR IRVS AEARPPR+
Sbjct: 249 FVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRR 287


>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
          Length = 289

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQ 119
           FVTY S +EV NAI++LDGADL+GR IRVS AEARPPR+
Sbjct: 249 FVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRR 287


>gb|AFK37653.1| unknown [Lotus japonicus]
          Length = 302

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/40 (65%), Positives = 37/40 (92%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQY 122
           FVT+SSP+EVN+AI +LDGADLNGR+I+VS A+++P R++
Sbjct: 263 FVTFSSPDEVNSAIRSLDGADLNGRAIKVSQADSKPKREF 302


>ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQ 119
           FVTY+S EEVN AI++LDG DL+GR IRV+ AEARPPR+
Sbjct: 238 FVTYNSAEEVNEAIQSLDGVDLDGRPIRVTQAEARPPRR 276


>ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223541388|gb|EEF42939.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 280

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/40 (72%), Positives = 36/40 (90%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQY 122
           FVTYSS EEV NAI++L+GA+L+GR+IRVS AEARP RQ+
Sbjct: 241 FVTYSSAEEVENAIDSLNGAELDGRAIRVSVAEARPRRQF 280


>ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 277

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/39 (71%), Positives = 33/39 (84%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQ 119
           FVTY S EE+N+AIE+LDG DL GRSIRV+ AE RPPR+
Sbjct: 237 FVTYGSAEEMNSAIESLDGVDLGGRSIRVTAAEPRPPRR 275


>ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Capsella rubella]
           gi|482563453|gb|EOA27643.1| hypothetical protein
           CARUB_v10023790mg [Capsella rubella]
          Length = 284

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQ 119
           FVTY+S +EV NAI +L+GADL+GR IRVS AEARPPR+
Sbjct: 244 FVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPPRR 282


>ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
           lyrata] gi|297327336|gb|EFH57756.1| hypothetical protein
           ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata]
          Length = 289

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQ 119
           FVTY+S +EV NAI +L+GADL+GR IRVS AEARPPR+
Sbjct: 249 FVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPPRR 287


>ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarpa]
           gi|222868100|gb|EEF05231.1| 29 kDa ribonucleoprotein
           [Populus trichocarpa]
          Length = 273

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/40 (70%), Positives = 37/40 (92%)
 Frame = +3

Query: 3   FVTYSSPEEVNNAIEALDGADLNGRSIRVSPAEARPPRQY 122
           FVTYSS EEV+NAI++L+GA+L+GR+IRVS AEA+P RQ+
Sbjct: 234 FVTYSSAEEVDNAIDSLNGAELDGRAIRVSVAEAKPRRQF 273