BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00016279
         (324 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containi...   150   2e-34
ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citr...   150   2e-34
gb|EOY20581.1| Pentatricopeptide repeat superfamily protein isof...   146   2e-33
ref|XP_002321560.2| pentatricopeptide repeat-containing family p...   146   3e-33
gb|EMJ12275.1| hypothetical protein PRUPE_ppa017205mg, partial [...   145   4e-33
ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi...   145   6e-33
ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containi...   141   1e-31
ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containi...   139   4e-31
ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containi...   139   5e-31
ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containi...   138   9e-31
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,...   137   2e-30
ref|XP_006591092.1| PREDICTED: pentatricopeptide repeat-containi...   136   3e-30
sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-c...   135   7e-30
gb|ESW04378.1| hypothetical protein PHAVU_011G090300g [Phaseolus...   130   1e-28
gb|EPS67440.1| hypothetical protein M569_07334, partial [Genlise...   116   4e-24
gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]        116   4e-24
ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [S...   115   8e-24
ref|XP_004955150.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23

>ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568845657|ref|XP_006476684.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 493

 Score =  150 bits (378), Expect = 2e-34
 Identities = 71/83 (85%), Positives = 78/83 (93%)
 Frame = +3

Query: 9   GTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTGN 188
           G CLPNLDTYNILI +MFVRKKSDDLL+AGKLLIEMVDRGF+PRKFTFNRVLNGL+L GN
Sbjct: 411 GVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLMGN 470

Query: 189 QGFAQEILRLQSKCGSLPRQFRL 257
           QG A+EILRLQS+CG LPRQF+L
Sbjct: 471 QGLAKEILRLQSRCGRLPRQFKL 493


>ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citrus clementina]
           gi|557541992|gb|ESR52970.1| hypothetical protein
           CICLE_v10019863mg [Citrus clementina]
          Length = 493

 Score =  150 bits (378), Expect = 2e-34
 Identities = 71/83 (85%), Positives = 78/83 (93%)
 Frame = +3

Query: 9   GTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTGN 188
           G CLPNLDTYNILI +MFVRKKSDDLL+AGKLLIEMVDRGF+PRKFTFNRVLNGL+L GN
Sbjct: 411 GVCLPNLDTYNILISSMFVRKKSDDLLVAGKLLIEMVDRGFMPRKFTFNRVLNGLLLIGN 470

Query: 189 QGFAQEILRLQSKCGSLPRQFRL 257
           QG A+EILRLQS+CG LPRQF+L
Sbjct: 471 QGLAKEILRLQSRCGRLPRQFKL 493


>gb|EOY20581.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|508773328|gb|EOY20584.1| Pentatricopeptide
           repeat superfamily protein isoform 1 [Theobroma cacao]
          Length = 491

 Score =  146 bits (369), Expect = 2e-33
 Identities = 69/83 (83%), Positives = 78/83 (93%)
 Frame = +3

Query: 9   GTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTGN 188
           G CLPNLDTYNILIGAMFVRKK DDL++AGKLLIEMVDRGF+PR+ TFNRVL+GL+LTGN
Sbjct: 409 GDCLPNLDTYNILIGAMFVRKKPDDLVVAGKLLIEMVDRGFMPRRLTFNRVLDGLLLTGN 468

Query: 189 QGFAQEILRLQSKCGSLPRQFRL 257
           QGFA+ ILRLQS+CG LPRQF+L
Sbjct: 469 QGFAKGILRLQSRCGRLPRQFKL 491


>ref|XP_002321560.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550322291|gb|EEF05687.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 491

 Score =  146 bits (368), Expect = 3e-33
 Identities = 70/83 (84%), Positives = 77/83 (92%)
 Frame = +3

Query: 9   GTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTGN 188
           G CLPNLDTYNILI AMFVRKKSDDLL+AG LLIEMVDRGF+PRKFTFNRVLNGL+LTGN
Sbjct: 409 GDCLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGN 468

Query: 189 QGFAQEILRLQSKCGSLPRQFRL 257
           QGFA+EILRLQS+CG L R+ +L
Sbjct: 469 QGFAKEILRLQSRCGRLTRKIKL 491


>gb|EMJ12275.1| hypothetical protein PRUPE_ppa017205mg, partial [Prunus persica]
          Length = 403

 Score =  145 bits (367), Expect = 4e-33
 Identities = 68/84 (80%), Positives = 78/84 (92%)
 Frame = +3

Query: 6   GGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTG 185
           GG CLPNLDTYN+LI AMFVRKK +DLL+AGKLLIEMV+RGFLPR+FTFNR+L+GL+LTG
Sbjct: 320 GGICLPNLDTYNVLISAMFVRKKPEDLLVAGKLLIEMVNRGFLPRRFTFNRILDGLLLTG 379

Query: 186 NQGFAQEILRLQSKCGSLPRQFRL 257
           NQ FAQEILRLQS+CG LPRQ +L
Sbjct: 380 NQAFAQEILRLQSRCGRLPRQVKL 403


>ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
           gi|449487784|ref|XP_004157799.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
          Length = 502

 Score =  145 bits (366), Expect = 6e-33
 Identities = 69/84 (82%), Positives = 78/84 (92%)
 Frame = +3

Query: 6   GGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTG 185
           G   LPNLDTYN+LI AMFVRKKS+DL++AGKLL+EMVDRGF+PRKFTFNRVLNGL+LTG
Sbjct: 419 GQGSLPNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLNGLLLTG 478

Query: 186 NQGFAQEILRLQSKCGSLPRQFRL 257
           NQ FA+EILRLQSKCG LPRQF+L
Sbjct: 479 NQAFAKEILRLQSKCGRLPRQFKL 502


>ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 489

 Score =  144 bits (363), Expect = 1e-32
 Identities = 68/83 (81%), Positives = 77/83 (92%)
 Frame = +3

Query: 9   GTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTGN 188
           G CLPNLDTYN+LI AMFVRKK +DLL+AGKLLIEMVDRGFLPRK+TFN+VL+GL+LTGN
Sbjct: 407 GECLPNLDTYNVLISAMFVRKKPEDLLVAGKLLIEMVDRGFLPRKYTFNKVLDGLLLTGN 466

Query: 189 QGFAQEILRLQSKCGSLPRQFRL 257
           QGFA+EILR QS+CG LPRQ RL
Sbjct: 467 QGFAKEILRSQSRCGRLPRQVRL 489


>ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565356286|ref|XP_006344999.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565356288|ref|XP_006345000.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X3 [Solanum tuberosum]
          Length = 486

 Score =  141 bits (355), Expect = 1e-31
 Identities = 70/83 (84%), Positives = 74/83 (89%)
 Frame = +3

Query: 9   GTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTGN 188
           G CLPNLDTYNILI AMFVRKKSDDLL+AGKLL EMVDRGFLPRKFTFNRVLNGL+LTGN
Sbjct: 404 GDCLPNLDTYNILISAMFVRKKSDDLLVAGKLLTEMVDRGFLPRKFTFNRVLNGLLLTGN 463

Query: 189 QGFAQEILRLQSKCGSLPRQFRL 257
           Q FA+EILRL SK G LP  F+L
Sbjct: 464 QDFAKEILRLVSKSGRLPCHFKL 486


>ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Solanum lycopersicum]
          Length = 492

 Score =  140 bits (354), Expect = 1e-31
 Identities = 70/83 (84%), Positives = 74/83 (89%)
 Frame = +3

Query: 9   GTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTGN 188
           G CLPNLDTYNILI AMFVRKKSDDLL+AGKLL EMVDRGFLPRKFTFNRVLNGL+LTGN
Sbjct: 410 GHCLPNLDTYNILISAMFVRKKSDDLLVAGKLLTEMVDRGFLPRKFTFNRVLNGLLLTGN 469

Query: 189 QGFAQEILRLQSKCGSLPRQFRL 257
           Q FA+EILRL SK G LP  F+L
Sbjct: 470 QDFAKEILRLVSKSGRLPCHFKL 492


>ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Vitis vinifera]
          Length = 450

 Score =  139 bits (350), Expect = 4e-31
 Identities = 68/81 (83%), Positives = 75/81 (92%)
 Frame = +3

Query: 15  CLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTGNQG 194
           CLPNLDTYNILI AMFVRKKSD LL AGKLLIEMV+RGFLPRKFTFNRVL+GL+LTGNQ 
Sbjct: 370 CLPNLDTYNILISAMFVRKKSDYLLTAGKLLIEMVERGFLPRKFTFNRVLDGLLLTGNQD 429

Query: 195 FAQEILRLQSKCGSLPRQFRL 257
           FA+EILRLQS+CG LPR+ +L
Sbjct: 430 FAKEILRLQSRCGRLPRRLKL 450


>ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Glycine max]
          Length = 495

 Score =  139 bits (349), Expect = 5e-31
 Identities = 63/83 (75%), Positives = 78/83 (93%)
 Frame = +3

Query: 9   GTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTGN 188
           G+CLPNLDTYN+LI AMFVRKKS+DL++AGKLL++MVDRGFLPRKFTFNRVLNGL++TGN
Sbjct: 413 GSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLPRKFTFNRVLNGLVITGN 472

Query: 189 QGFAQEILRLQSKCGSLPRQFRL 257
           Q FA+EILR+QS+CG + R+ +L
Sbjct: 473 QDFAKEILRMQSRCGRIVRRLKL 495


>ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cicer arietinum]
          Length = 498

 Score =  138 bits (347), Expect = 9e-31
 Identities = 66/83 (79%), Positives = 75/83 (90%)
 Frame = +3

Query: 9   GTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTGN 188
           GTCLPNLDTYNILI AMFVRKKS+DL++AGKLLIEMV RGFLPRKFTFNRVLNGL+LTGN
Sbjct: 416 GTCLPNLDTYNILISAMFVRKKSEDLVVAGKLLIEMVGRGFLPRKFTFNRVLNGLVLTGN 475

Query: 189 QGFAQEILRLQSKCGSLPRQFRL 257
           + FA EILR+QS+CG + R  +L
Sbjct: 476 RDFANEILRMQSRCGRILRHVKL 498


>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 482

 Score =  137 bits (344), Expect = 2e-30
 Identities = 65/83 (78%), Positives = 74/83 (89%)
 Frame = +3

Query: 9   GTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTGN 188
           G CLPNLDTYNILI +MFVRK SD+LL+AGKLL+EMVDRGFLPRK TFNRVL+GL+LTGN
Sbjct: 400 GDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLTFNRVLDGLLLTGN 459

Query: 189 QGFAQEILRLQSKCGSLPRQFRL 257
           Q FA+EIL LQ  CG LPR+F+L
Sbjct: 460 QDFAKEILSLQGGCGRLPRKFKL 482


>ref|XP_006591092.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial isoform X1 [Glycine max]
           gi|571489017|ref|XP_006591093.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial isoform X2 [Glycine max]
          Length = 492

 Score =  136 bits (342), Expect = 3e-30
 Identities = 62/83 (74%), Positives = 77/83 (92%)
 Frame = +3

Query: 9   GTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTGN 188
           G CLPNLDTYN+LI AMFVRKKS+DL++AGKLL+EMV+RGFLPRKFTFNRVLNGL++TGN
Sbjct: 410 GLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRVLNGLVITGN 469

Query: 189 QGFAQEILRLQSKCGSLPRQFRL 257
           Q FA++ILR+QS+CG + R+ +L
Sbjct: 470 QDFAKDILRMQSRCGRVVRRLKL 492


>sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74900, mitochondrial; AltName: Full=Protein
           ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
           Precursor gi|5882733|gb|AAD55286.1|AC008263_17 Contains
           a PF|01535 DUF17 domain [Arabidopsis thaliana]
           gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical
           protein; 69434-67986 [Arabidopsis thaliana]
          Length = 482

 Score =  135 bits (339), Expect = 7e-30
 Identities = 66/84 (78%), Positives = 77/84 (91%), Gaps = 1/84 (1%)
 Frame = +3

Query: 9   GTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTGN 188
           G CLPNLDTYNILI  MFVRK+S+D+++AGKLL+EMV+RGF+PRKFTFNRVLNGL+LTGN
Sbjct: 399 GDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGN 458

Query: 189 QGFAQEILRLQSKCGS-LPRQFRL 257
           Q FA+EILRLQSK GS L R+FRL
Sbjct: 459 QAFAKEILRLQSKSGSRLLRKFRL 482


>gb|ESW04378.1| hypothetical protein PHAVU_011G090300g [Phaseolus vulgaris]
          Length = 491

 Score =  130 bits (328), Expect = 1e-28
 Identities = 60/81 (74%), Positives = 73/81 (90%)
 Frame = +3

Query: 15  CLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTGNQG 194
           CLPNLDTYN++I AMF+RKKS+DL++AGKLL+EMVDRGFLPRKFTFNRVLNGL +TGNQ 
Sbjct: 411 CLPNLDTYNVVISAMFLRKKSEDLVVAGKLLMEMVDRGFLPRKFTFNRVLNGLAITGNQD 470

Query: 195 FAQEILRLQSKCGSLPRQFRL 257
           FA+EILR Q +CG + R+ +L
Sbjct: 471 FAKEILRKQGRCGRVVRRLKL 491


>gb|EPS67440.1| hypothetical protein M569_07334, partial [Genlisea aurea]
          Length = 451

 Score =  116 bits (290), Expect = 4e-24
 Identities = 54/82 (65%), Positives = 70/82 (85%)
 Frame = +3

Query: 12  TCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTGNQ 191
           TCL N DTYN+LI +MF R+KS+DL +AG+LLIEMV RGFLPR+FT NRVLNGL++TGNQ
Sbjct: 370 TCLANQDTYNVLISSMFARRKSEDLQVAGELLIEMVGRGFLPRRFTVNRVLNGLLVTGNQ 429

Query: 192 GFAQEILRLQSKCGSLPRQFRL 257
            FA+++LR+ +  G LPR+F+L
Sbjct: 430 TFARQVLRVLTANGLLPRKFKL 451


>gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
          Length = 501

 Score =  116 bits (290), Expect = 4e-24
 Identities = 53/84 (63%), Positives = 69/84 (82%)
 Frame = +3

Query: 6   GGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTG 185
           G  CLPN DTYNI+I AMFVRK+++D+ +A ++++EMVDRG+LPRKF FNRVLNGLMLTG
Sbjct: 418 GEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRKFMFNRVLNGLMLTG 477

Query: 186 NQGFAQEILRLQSKCGSLPRQFRL 257
           NQ  ++E+LR+Q K   L R+ RL
Sbjct: 478 NQELSRELLRMQEKYTRLRREIRL 501


>ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
           gi|241932588|gb|EES05733.1| hypothetical protein
           SORBIDRAFT_04g031880 [Sorghum bicolor]
          Length = 502

 Score =  115 bits (287), Expect = 8e-24
 Identities = 52/84 (61%), Positives = 69/84 (82%)
 Frame = +3

Query: 6   GGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTG 185
           G  CLPN DTYNI+I AMFVRK+++D+ +A ++++EMVDRG+LPR+F FNRVLNGLMLTG
Sbjct: 419 GEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRRFMFNRVLNGLMLTG 478

Query: 186 NQGFAQEILRLQSKCGSLPRQFRL 257
           NQ  ++E+LR+Q K   L R+ RL
Sbjct: 479 NQELSRELLRMQEKYTRLRREIRL 502


>ref|XP_004955150.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Setaria italica]
          Length = 505

 Score =  114 bits (285), Expect = 1e-23
 Identities = 51/84 (60%), Positives = 69/84 (82%)
 Frame = +3

Query: 6   GGTCLPNLDTYNILIGAMFVRKKSDDLLIAGKLLIEMVDRGFLPRKFTFNRVLNGLMLTG 185
           G  CLPN DTYNI+I AMFVRK+++D+ +A +++++MVDRG+LPR+F FNRVLNGLMLTG
Sbjct: 422 GMECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVDMVDRGYLPRRFMFNRVLNGLMLTG 481

Query: 186 NQGFAQEILRLQSKCGSLPRQFRL 257
           NQ  ++E+LR+Q K   L R+ RL
Sbjct: 482 NQELSRELLRMQEKYARLRREIRL 505