BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00016196
         (1238 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS69003.1| hypothetical protein M569_05766, partial [Genlise...   264   5e-68
ref|XP_006361687.1| PREDICTED: zinc finger CCHC-type and RNA-bin...   249   2e-63
ref|XP_004250046.1| PREDICTED: uncharacterized protein LOC101266...   248   3e-63
ref|NP_187651.1| U12-type spliceosomal protein U11/U12 [Arabidop...   237   6e-60
ref|XP_006300227.1| hypothetical protein CARUB_v10016463mg [Caps...   237   8e-60
ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arab...   237   8e-60
dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]           233   9e-59
ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-bin...   233   1e-58
ref|XP_002529595.1| RNA binding motif protein, putative [Ricinus...   233   2e-58
ref|XP_006436503.1| hypothetical protein CICLE_v10032576mg [Citr...   224   7e-56
ref|XP_002315325.2| hypothetical protein POPTR_0010s23420g [Popu...   223   1e-55
gb|EOY18808.1| RNA recognition motif and CCHC-type zinc finger d...   223   2e-55
gb|EOY18810.1| RNA recognition motif and CCHC-type zinc finger d...   222   3e-55
tpg|DAA62644.1| TPA: RNA binding protein [Zea mays]                   220   1e-54
ref|XP_006407573.1| hypothetical protein EUTSA_v10021363mg [Eutr...   219   1e-54
ref|NP_001151698.1| RNA binding protein [Zea mays] gi|195649091|...   219   2e-54
gb|EXB96201.1| Zinc finger CCHC-type and RNA-binding motif-conta...   218   3e-54
gb|EMJ19402.1| hypothetical protein PRUPE_ppa010566mg [Prunus pe...   218   3e-54
ref|XP_004142290.1| PREDICTED: zinc finger CCHC-type and RNA-bin...   218   3e-54
ref|XP_004308765.1| PREDICTED: zinc finger CCHC-type and RNA-bin...   218   4e-54

>gb|EPS69003.1| hypothetical protein M569_05766, partial [Genlisea aurea]
          Length = 224

 Score =  264 bits (675), Expect = 5e-68
 Identities = 146/249 (58%), Positives = 158/249 (63%)
 Frame = +1

Query: 46  NYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXXLAPSKSTVYVSNVDYNLTNSD 225
           NY   EEDDTFFYRY                        LAPSKST+YVSN+DYNLTNSD
Sbjct: 3   NYEQGEEDDTFFYRYSSAAAAAPKPSSRPGGSGG-----LAPSKSTLYVSNIDYNLTNSD 57

Query: 226 LHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTLRASI 405
           LHTIFSTFGK+ KVTVLKDRVTRQSKGVAFV+FV+R+DAVKAVKGMDKK+LNGRTLRASI
Sbjct: 58  LHTIFSTFGKIGKVTVLKDRVTRQSKGVAFVMFVSREDAVKAVKGMDKKVLNGRTLRASI 117

Query: 406 AADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXXXXXXXX 585
           AADNGRA EFI+K+ YKDKSRCYECGEEGHLSYECP+NFLGPRERPVA            
Sbjct: 118 AADNGRAAEFIKKRAYKDKSRCYECGEEGHLSYECPKNFLGPRERPVAKKGRRSGGGREE 177

Query: 586 XXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXXXXXXXXXXX 765
                 E +               NWASVV G +   E                      
Sbjct: 178 KEQVEEEADF-----------LADNWASVVVGGEEGVEN-----------EGRKKEKRKG 215

Query: 766 YFSDESDED 792
           YFSDESDED
Sbjct: 216 YFSDESDED 224


>ref|XP_006361687.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1-like [Solanum tuberosum]
          Length = 275

 Score =  249 bits (636), Expect = 2e-63
 Identities = 147/278 (52%), Positives = 165/278 (59%), Gaps = 23/278 (8%)
 Frame = +1

Query: 31  MSRKGNYS-DDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX-----------LAPS 174
           MSR+  YS DD+EDDTF+YRY                                   LAPS
Sbjct: 1   MSRRRKYSEDDDEDDTFYYRYSSAPSPAPSSSATSKNVSTSKSSHGGGGGSSGSGGLAPS 60

Query: 175 KSTVYVSNVDYNLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAV 354
           KSTVYVSN+DY LTNSDLHTIFSTFGKVAKVTV+KDRVTR+S+GVAF+LFV+R+DA+KAV
Sbjct: 61  KSTVYVSNLDYTLTNSDLHTIFSTFGKVAKVTVVKDRVTRKSRGVAFILFVSREDAIKAV 120

Query: 355 KGMDKKILNGRTLRASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPR 534
           KG+DKK+LNGRTL ASIA+DNGRA EFIRKKVYKDKSRCYECGEEGHLSYECP+N LGPR
Sbjct: 121 KGIDKKVLNGRTLTASIASDNGRAAEFIRKKVYKDKSRCYECGEEGHLSYECPKNLLGPR 180

Query: 535 ERPV-----------AXXXXXXXXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDG 681
           ERP                               +                 NWASVVD 
Sbjct: 181 ERPEPPKKGRRGGGGGGGGGGKGGDEGRGGEWEDDEEEEEADDEGGARFDDDNWASVVD- 239

Query: 682 EDAAKERLLXXXXXXXXXXXXXXXXXXXYFSDESDEDD 795
              A+ERLL                   YFSDESDE+D
Sbjct: 240 -RGAEERLL-KGDNDEFKKEARKDKRKGYFSDESDEED 275


>ref|XP_004250046.1| PREDICTED: uncharacterized protein LOC101266891 [Solanum
           lycopersicum]
          Length = 272

 Score =  248 bits (634), Expect = 3e-63
 Identities = 146/275 (53%), Positives = 163/275 (59%), Gaps = 20/275 (7%)
 Frame = +1

Query: 31  MSRKGNYS-DDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX------------LAP 171
           MSRK  YS DD+EDDTF+YRY                                    LAP
Sbjct: 1   MSRKRKYSEDDDEDDTFYYRYSSAPSPAPSSSSVTSKNVSISKSSHGGGGGISGSGGLAP 60

Query: 172 SKSTVYVSNVDYNLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKA 351
           SKSTVYVSN+DY LTNSDLHTIFS FGKVAKVTV+KDRVTR+S+GVAF+LF++R+DA+KA
Sbjct: 61  SKSTVYVSNLDYTLTNSDLHTIFSNFGKVAKVTVVKDRVTRKSRGVAFILFISREDAIKA 120

Query: 352 VKGMDKKILNGRTLRASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGP 531
           VKG+DKK+LNGRTL ASIA+DNGRA EFIRKKVYKDKSRCYECGEEGHLSYECP+N  GP
Sbjct: 121 VKGIDKKLLNGRTLTASIASDNGRAAEFIRKKVYKDKSRCYECGEEGHLSYECPKNLFGP 180

Query: 532 RERPV-------AXXXXXXXXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDA 690
           RERP                           E                 NWASVVD    
Sbjct: 181 RERPEPPKKGRRGGGGGKRGDEGRGGEWEDDEEEEDEADDEGGARFADDNWASVVD--RG 238

Query: 691 AKERLLXXXXXXXXXXXXXXXXXXXYFSDESDEDD 795
           A+ERLL                   YFSDESDE+D
Sbjct: 239 AEERLL-KGDNDEFKKEARKEKRKGYFSDESDEED 272


>ref|NP_187651.1| U12-type spliceosomal protein U11/U12 [Arabidopsis thaliana]
           gi|12322795|gb|AAG51392.1|AC011560_24 hypothetical
           protein; 114721-113936 [Arabidopsis thaliana]
           gi|54261729|gb|AAV31168.1| At3g10400 [Arabidopsis
           thaliana] gi|61656137|gb|AAX49371.1| At3g10400
           [Arabidopsis thaliana] gi|332641379|gb|AEE74900.1|
           U12-type spliceosomal protein U11/U12 [Arabidopsis
           thaliana]
          Length = 261

 Score =  237 bits (605), Expect = 6e-60
 Identities = 135/260 (51%), Positives = 157/260 (60%), Gaps = 7/260 (2%)
 Frame = +1

Query: 37  RKGNYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX------LAPSKSTVYVSN 198
           RK ++SDDEEDDTF+YRY                              LAPSKST+YVSN
Sbjct: 4   RKIHHSDDEEDDTFYYRYSSVAAPPPSNPKHQPSSSAKSSAPGGGSGGLAPSKSTLYVSN 63

Query: 199 VDYNLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKIL 378
           +D++LTNSD+HT+FSTFGKVA+VTVLKDR TRQS+GVAFVL+V+R+DA KA + MD KIL
Sbjct: 64  LDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSMDAKIL 123

Query: 379 NGRTLRASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXX 558
           NGR L  SIAADNGRA+EFI+K+VYKDKSRCYECG+EGHLSYECP+N LGPRERP     
Sbjct: 124 NGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQLGPRERPPPPKK 183

Query: 559 XXXXXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERL-LXXXXXXXXX 735
                                            NWASVVD E  A ERL           
Sbjct: 184 RGRRKEEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNE--AGERLRKREAEEEEER 241

Query: 736 XXXXXXXXXXYFSDESDEDD 795
                     YFSDESD++D
Sbjct: 242 RMKRKEKKVSYFSDESDDED 261


>ref|XP_006300227.1| hypothetical protein CARUB_v10016463mg [Capsella rubella]
           gi|482568936|gb|EOA33125.1| hypothetical protein
           CARUB_v10016463mg [Capsella rubella]
          Length = 260

 Score =  237 bits (604), Expect = 8e-60
 Identities = 135/259 (52%), Positives = 160/259 (61%), Gaps = 6/259 (2%)
 Frame = +1

Query: 37  RKGNYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX----LAPSKSTVYVSNVD 204
           +K ++SDDEEDDTF+YRY                            LAPSKST+YVSN+D
Sbjct: 4   KKVHHSDDEEDDTFYYRYSSVAAPPPSNPKQPSSSAKSSAPGGSGGLAPSKSTLYVSNLD 63

Query: 205 YNLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNG 384
           ++LTNSD+HT+FSTFGKVA+VTVLKDR TR+S+GVAFVL+V+R+DA KA   MD KILNG
Sbjct: 64  FSLTNSDIHTLFSTFGKVARVTVLKDRHTRRSRGVAFVLYVSREDAAKASGSMDGKILNG 123

Query: 385 RTLRASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXX 564
           R L  SIAADNGRA+EFI+K+VYKDKSRCYECG+EGHLSYECPRN LGPRERP       
Sbjct: 124 RKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPRNQLGPRERPPPPKKRG 183

Query: 565 XXXXXXXXXXXXYEYN-LXXXXXXXXXXXXXXNWASVVDGEDAAKERL-LXXXXXXXXXX 738
                        E++                NWASVVD E  A ERL +          
Sbjct: 184 RRKEDGGEAEETREWSAAPPSLAVAEETFEEENWASVVDNE--AGERLRMREAEEEEERR 241

Query: 739 XXXXXXXXXYFSDESDEDD 795
                    YFSDESD++D
Sbjct: 242 KKRKEKKVSYFSDESDDED 260


>ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
           lyrata] gi|297328506|gb|EFH58925.1| hypothetical protein
           ARALYDRAFT_897216 [Arabidopsis lyrata subsp. lyrata]
          Length = 257

 Score =  237 bits (604), Expect = 8e-60
 Identities = 134/260 (51%), Positives = 160/260 (61%), Gaps = 7/260 (2%)
 Frame = +1

Query: 37  RKGNYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX------LAPSKSTVYVSN 198
           +K + SDDEEDDTF+YRY                              LAPSKST+YVSN
Sbjct: 4   KKIHQSDDEEDDTFYYRYSSVAAPPPSNPRQPSSSSAKSSAPGGGSGGLAPSKSTLYVSN 63

Query: 199 VDYNLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKIL 378
           +D++LTNSD+HT+FSTFGKVA+VTVLKDR TRQS+GVAFVL+V+R+DA KA + MD KIL
Sbjct: 64  LDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSMDAKIL 123

Query: 379 NGRTLRASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXX 558
           NGR L  SIAADNGRA+EFI+K+VYKDKSRCYECG+EGHLSYECP+N LGPRERP     
Sbjct: 124 NGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQLGPRERPPPPKK 183

Query: 559 XXXXXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERL-LXXXXXXXXX 735
                          +++               NWASVVD E  A ERL +         
Sbjct: 184 RGRRKEDEGEAEEIRDWS----AAPSLEGFEEENWASVVDNE--AGERLRMREAEEEEER 237

Query: 736 XXXXXXXXXXYFSDESDEDD 795
                     YFSDESD++D
Sbjct: 238 RKKRKEKKVSYFSDESDDED 257


>dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]
          Length = 261

 Score =  233 bits (595), Expect = 9e-59
 Identities = 134/260 (51%), Positives = 155/260 (59%), Gaps = 7/260 (2%)
 Frame = +1

Query: 37  RKGNYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX------LAPSKSTVYVSN 198
           RK ++SDDEEDDTF+YRY                              LAPSKST+YVSN
Sbjct: 4   RKIHHSDDEEDDTFYYRYSSVAAPPPSNPKHQPSSSAKSSAPGGGSGGLAPSKSTLYVSN 63

Query: 199 VDYNLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKIL 378
           +D++LTNSD+HT+FSTFGKVA+VTVLKDR TRQS+GVAFVL+V R+DA KA + MD KIL
Sbjct: 64  LDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVPREDAAKAARSMDAKIL 123

Query: 379 NGRTLRASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXX 558
           NGR L  SIAADNG A+EFI+K+VYKDKSRCYECG+EGHLSYECP+N LGPRERP     
Sbjct: 124 NGRKLTVSIAADNGLASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQLGPRERPPPPKK 183

Query: 559 XXXXXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERL-LXXXXXXXXX 735
                                            NWASVVD E  A ERL           
Sbjct: 184 RGRRKEEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNE--AGERLRKREAEEEEER 241

Query: 736 XXXXXXXXXXYFSDESDEDD 795
                     YFSDESD++D
Sbjct: 242 RMKRKEKKVSYFSDESDDED 261


>ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1 [Vitis vinifera] gi|147789032|emb|CAN75783.1|
           hypothetical protein VITISV_022491 [Vitis vinifera]
          Length = 250

 Score =  233 bits (594), Expect = 1e-58
 Identities = 133/254 (52%), Positives = 152/254 (59%), Gaps = 2/254 (0%)
 Frame = +1

Query: 40  KGNYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX--LAPSKSTVYVSNVDYNL 213
           + N SD EED+T +YRY                          LAPSKSTVYVSN+DY L
Sbjct: 3   RNNNSDSEEDETLYYRYASSSIPNPNPKSNSSKLQKRSSGSGSLAPSKSTVYVSNLDYTL 62

Query: 214 TNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTL 393
           TNSDL TIFSTFGKVAKVT+LKDR TR S+GVAFVLFV+RD+A+ A + M+ K+LN RTL
Sbjct: 63  TNSDLFTIFSTFGKVAKVTILKDRHTRHSRGVAFVLFVSRDEAIAAAREMNGKVLNKRTL 122

Query: 394 RASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXXXX 573
            ASIAADNGRA EFIR++VYKDKSRCYECGE GHLSYECPRN LGPRERPV         
Sbjct: 123 TASIAADNGRAAEFIRRRVYKDKSRCYECGEGGHLSYECPRNQLGPRERPVPKRSRRGQG 182

Query: 574 XXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXXXXXXX 753
                    ++                 NWASVVD    A +RLL               
Sbjct: 183 GSEARQNGDHD----NGGSDGGEAFEDDNWASVVD--TGADQRLLKGSEGLEMRKKGKKE 236

Query: 754 XXXXYFSDESDEDD 795
               YFSDESDE++
Sbjct: 237 KKASYFSDESDEEE 250


>ref|XP_002529595.1| RNA binding motif protein, putative [Ricinus communis]
           gi|223530928|gb|EEF32787.1| RNA binding motif protein,
           putative [Ricinus communis]
          Length = 217

 Score =  233 bits (593), Expect = 2e-58
 Identities = 116/166 (69%), Positives = 132/166 (79%), Gaps = 1/166 (0%)
 Frame = +1

Query: 55  DDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX-LAPSKSTVYVSNVDYNLTNSDLH 231
           DD++DDTF+YRY                         LAPSKSTVYVSN+DY+LTNSDLH
Sbjct: 9   DDDDDDTFYYRYSSTSTSTLSSLNQKNPKSKSNGSGGLAPSKSTVYVSNLDYSLTNSDLH 68

Query: 232 TIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTLRASIAA 411
           T+FSTFGK+A+VTVLKD+ +RQSKGVAF+ FV+RDDAV A K MDKKILNGRTL ASIA+
Sbjct: 69  TLFSTFGKIARVTVLKDKQSRQSKGVAFIQFVSRDDAVSAAKQMDKKILNGRTLSASIAS 128

Query: 412 DNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVA 549
           DNGRA EFI+K+VYKDKSRCYECGE GHLSYECP+N LGPRERPVA
Sbjct: 129 DNGRAAEFIKKRVYKDKSRCYECGEIGHLSYECPKNQLGPRERPVA 174


>ref|XP_006436503.1| hypothetical protein CICLE_v10032576mg [Citrus clementina]
           gi|568864409|ref|XP_006485591.1| PREDICTED: zinc finger
           CCHC-type and RNA-binding motif-containing protein
           1-like [Citrus sinensis] gi|557538699|gb|ESR49743.1|
           hypothetical protein CICLE_v10032576mg [Citrus
           clementina]
          Length = 244

 Score =  224 bits (570), Expect = 7e-56
 Identities = 132/262 (50%), Positives = 156/262 (59%), Gaps = 9/262 (3%)
 Frame = +1

Query: 37  RKGNYSD-DEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX--------LAPSKSTVY 189
           +K N SD DEEDDTF+YRY                                LAPSKSTVY
Sbjct: 4   KKKNKSDSDEEDDTFYYRYASTGNAPANPSSSSSADVTSSGPHKKSKGSGGLAPSKSTVY 63

Query: 190 VSNVDYNLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDK 369
           VSN+DY LTNSDLHT+FSTFGK+A+VTVLKDR TR+S+GVAF+ FV   DA+ A + +  
Sbjct: 64  VSNLDYALTNSDLHTLFSTFGKIARVTVLKDRATRKSRGVAFIQFVQIPDALSAARAIHG 123

Query: 370 KILNGRTLRASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVA 549
           K+LNGRT+ ASIAADNGRA+ FI+K+VYKDKSRCYECG+EGHLSYECPRN LGPRERP+ 
Sbjct: 124 KVLNGRTVNASIAADNGRASSFIKKRVYKDKSRCYECGDEGHLSYECPRNQLGPRERPMP 183

Query: 550 XXXXXXXXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXX 729
                             E++                WASVVDG   A+ERLL       
Sbjct: 184 KKLRRRSDGEDES-----EFD-------------DGGWASVVDG--GAEERLL-LMGENE 222

Query: 730 XXXXXXXXXXXXYFSDESDEDD 795
                       YFSDESDE++
Sbjct: 223 SEEKRKKAKRVSYFSDESDEEE 244


>ref|XP_002315325.2| hypothetical protein POPTR_0010s23420g [Populus trichocarpa]
           gi|550330442|gb|EEF01496.2| hypothetical protein
           POPTR_0010s23420g [Populus trichocarpa]
          Length = 246

 Score =  223 bits (569), Expect = 1e-55
 Identities = 128/248 (51%), Positives = 151/248 (60%)
 Frame = +1

Query: 52  SDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXXLAPSKSTVYVSNVDYNLTNSDLH 231
           SD +ED+ F++RY                        LAPSKST+YVSN+D++LTNSDLH
Sbjct: 9   SDSDEDEIFYHRYSSATTSSQHPPSSTKPHGGSGG--LAPSKSTLYVSNLDFSLTNSDLH 66

Query: 232 TIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTLRASIAA 411
           T+FSTFGKVA+VTVLKDR TR+S+GVAF+ FV+R DAV AV+ MDKKILNGRTL ASIAA
Sbjct: 67  TLFSTFGKVARVTVLKDRTTRKSRGVAFIQFVSRSDAVTAVEQMDKKILNGRTLSASIAA 126

Query: 412 DNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXXXXXXXXXX 591
           DNGRA EFI+K+VYKDKS+CYECGE+GHLSYECPRN LG RERPV               
Sbjct: 127 DNGRAAEFIKKRVYKDKSKCYECGEDGHLSYECPRNRLGIRERPVVKRGRGGGGGGGGGG 186

Query: 592 XXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXXXXXXXXXXXYF 771
                                  WA+ VDG    +ERLL                   YF
Sbjct: 187 GRG---GGDWEEEEEEGEFEEEKWAAAVDG--GVEERLL---KGGEVEKKKVKVKKASYF 238

Query: 772 SDESDEDD 795
           SDESDE++
Sbjct: 239 SDESDEEE 246


>gb|EOY18808.1| RNA recognition motif and CCHC-type zinc finger domains containing
           protein [Theobroma cacao]
          Length = 260

 Score =  223 bits (567), Expect = 2e-55
 Identities = 129/257 (50%), Positives = 151/257 (58%), Gaps = 9/257 (3%)
 Frame = +1

Query: 52  SDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX---------LAPSKSTVYVSNVD 204
           SD EED+TF++RY                                 LAPSKST+YVSN+D
Sbjct: 11  SDSEEDETFYFRYSSAAAPPSSSSSKPSNPNQTISKCTGGGGGSSGLAPSKSTLYVSNID 70

Query: 205 YNLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNG 384
           Y+LTNSDLHT+FSTFGK+A+VTVLKD VTR SKGVAF+ FV+RDDA+ A + M  K+LNG
Sbjct: 71  YSLTNSDLHTLFSTFGKIARVTVLKDSVTRISKGVAFIQFVSRDDALSAERVMHGKVLNG 130

Query: 385 RTLRASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXX 564
           RTL  SIA DNGRA EFIRK+VYKDKSRCYECG  GHLSYECP+N LGPRERPV+     
Sbjct: 131 RTLSTSIAVDNGRAPEFIRKRVYKDKSRCYECGVSGHLSYECPKNQLGPRERPVSKKGRR 190

Query: 565 XXXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXXXX 744
                          +               NWASVVDG  +A+ERL             
Sbjct: 191 GCGGGERREDNG---DWSDEELDGGVGFEEENWASVVDG--SAEERL--RKAEMVEEKKK 243

Query: 745 XXXXXXXYFSDESDEDD 795
                  YFSDESDE++
Sbjct: 244 KVARKASYFSDESDEEE 260


>gb|EOY18810.1| RNA recognition motif and CCHC-type zinc finger domains containing
           protein [Theobroma cacao]
          Length = 257

 Score =  222 bits (565), Expect = 3e-55
 Identities = 129/254 (50%), Positives = 151/254 (59%), Gaps = 6/254 (2%)
 Frame = +1

Query: 52  SDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX------LAPSKSTVYVSNVDYNL 213
           SD EED+TF++RY                              LAPSKST+YVSN+DY+L
Sbjct: 11  SDSEEDETFYFRYSSVAAPPSSSSSNPNQITSKSTGGGGGSSGLAPSKSTLYVSNLDYSL 70

Query: 214 TNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTL 393
           TNSDLHT+FSTFGK+A+V+VLKDRVTR+ KGVAF+ FV+RD A+ A + M  K+LNGRTL
Sbjct: 71  TNSDLHTLFSTFGKIARVSVLKDRVTRKPKGVAFIQFVSRDGALSAERVMHGKVLNGRTL 130

Query: 394 RASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXXXX 573
            ASIA DNGRA EFIRK+VYKDKSRCYECG  GHLSYECP+N LGPRERPV         
Sbjct: 131 SASIAIDNGRAPEFIRKRVYKDKSRCYECGVTGHLSYECPKNQLGPRERPVPKKGRRGCG 190

Query: 574 XXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXXXXXXX 753
                       +               NWASVVDG  AA+ERL                
Sbjct: 191 GGERREDNG---DWADEESDGGDGFEEENWASVVDG--AAEERL--RKAEMVEEKKKKVT 243

Query: 754 XXXXYFSDESDEDD 795
               YFSDESDE++
Sbjct: 244 RKVSYFSDESDEEE 257


>tpg|DAA62644.1| TPA: RNA binding protein [Zea mays]
          Length = 261

 Score =  220 bits (560), Expect = 1e-54
 Identities = 125/259 (48%), Positives = 146/259 (56%), Gaps = 6/259 (2%)
 Frame = +1

Query: 37  RKGNYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXXLAPSKSTVYVSNVDYNLT 216
           R+G    D EDD+F YRY                        LAPSKSTVYVSN+D+ LT
Sbjct: 5   RRGGSDSDGEDDSFLYRYPLPSVAASEGGGGKPRGGGGGSGGLAPSKSTVYVSNLDFALT 64

Query: 217 NSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTLR 396
           NSDLH +FS FG+VA+VTVLKDR +R+S+GVAFVLFV+R+DA  A   M  K+LNGRTL 
Sbjct: 65  NSDLHLLFSRFGRVARVTVLKDRESRRSRGVAFVLFVSREDAAAAAAEMHGKVLNGRTLS 124

Query: 397 ASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXXXXX 576
           ASIAADNGRA EFIR++VY+DKSRCYECGEEGHLSYECPRN LGPRERP           
Sbjct: 125 ASIAADNGRAAEFIRRRVYRDKSRCYECGEEGHLSYECPRNQLGPRERPAPSKKSRRGGG 184

Query: 577 XXXXXXXXYE------YNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXX 738
                           ++                WASVVD  +  ++             
Sbjct: 185 GGGGGRGRGRGGQADWHSDDDEDAAAAVAFEDDKWASVVDTREVEEK---AAGKGEGMGK 241

Query: 739 XXXXXXXXXYFSDESDEDD 795
                    YFSDESDEDD
Sbjct: 242 AARREKRKCYFSDESDEDD 260


>ref|XP_006407573.1| hypothetical protein EUTSA_v10021363mg [Eutrema salsugineum]
           gi|557108719|gb|ESQ49026.1| hypothetical protein
           EUTSA_v10021363mg [Eutrema salsugineum]
          Length = 257

 Score =  219 bits (559), Expect = 1e-54
 Identities = 110/173 (63%), Positives = 131/173 (75%), Gaps = 4/173 (2%)
 Frame = +1

Query: 37  RKGNYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX----LAPSKSTVYVSNVD 204
           +K  + D EEDDTF+ RY                            LAPSKST+YVSN+D
Sbjct: 8   KKSLHCDHEEDDTFYDRYVFSVAAPPIPPSNPSSSAKSSAPGGSGGLAPSKSTLYVSNLD 67

Query: 205 YNLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNG 384
           ++LTNSD+HT+FSTFGKVA+VTVLKDR TR+S+GVAFVL+V+R+DA KA + M+ KILNG
Sbjct: 68  FSLTNSDIHTLFSTFGKVARVTVLKDRQTRRSRGVAFVLYVSREDAAKAARSMEGKILNG 127

Query: 385 RTLRASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERP 543
           R L  SIAADNGRA+EFI+K+VYKDKSRCYECG+EGHLSYECPRN LGPRERP
Sbjct: 128 RKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPRNQLGPRERP 180


>ref|NP_001151698.1| RNA binding protein [Zea mays] gi|195649091|gb|ACG44013.1| RNA
           binding protein [Zea mays]
          Length = 267

 Score =  219 bits (557), Expect = 2e-54
 Identities = 109/169 (64%), Positives = 125/169 (73%)
 Frame = +1

Query: 37  RKGNYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXXLAPSKSTVYVSNVDYNLT 216
           R+G    D EDD+F YRY                        LAPSKSTVYVSN+D+ LT
Sbjct: 5   RRGGSDSDGEDDSFLYRYPLPSVAASEGGGGKPRGGGGGSGGLAPSKSTVYVSNLDFALT 64

Query: 217 NSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTLR 396
           NSDLH +FS FG+VA+VTVLKDR +R+S+GVAFVLFV+R+DA  A   M  K+LNGRTL 
Sbjct: 65  NSDLHLLFSRFGRVARVTVLKDRESRRSRGVAFVLFVSREDAAAAAAEMHGKVLNGRTLS 124

Query: 397 ASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERP 543
           ASIAADNGRA EFIR++VY+DKSRCYECGEEGHLSYECPRN LGPRERP
Sbjct: 125 ASIAADNGRAAEFIRRRVYRDKSRCYECGEEGHLSYECPRNQLGPRERP 173


>gb|EXB96201.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
           [Morus notabilis]
          Length = 362

 Score =  218 bits (556), Expect = 3e-54
 Identities = 133/268 (49%), Positives = 154/268 (57%), Gaps = 14/268 (5%)
 Frame = +1

Query: 34  SRKGNYSD-DEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX------LAPSKSTVYV 192
           ++K N +D D++DDTF+YRY                              LAPSKST+YV
Sbjct: 99  TKKNNPTDSDDDDDTFYYRYASAAANPPDGAGATTSAAKKHSGGGGGSGTLAPSKSTLYV 158

Query: 193 SNVDYNLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKK 372
           SN+D+ LTNSDLHT+FSTFGK+A+V+VLKDR TRQS+GVAFV FV+RDDAV A   M  K
Sbjct: 159 SNIDFALTNSDLHTLFSTFGKIARVSVLKDRHTRQSRGVAFVQFVSRDDAVFAASQMHGK 218

Query: 373 ILNGRTLRASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPV-- 546
           +LNGRTL ASIAADNGR+ EFIRK+VY+DKSRCYECG EGHLSYECP+N LGPRERP   
Sbjct: 219 VLNGRTLTASIAADNGRSAEFIRKRVYRDKSRCYECGAEGHLSYECPKNQLGPRERPPPK 278

Query: 547 ---AXXXXXXXXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXX 717
                                                   NWASVVDG   A +RLL   
Sbjct: 279 RERGRGGGGGGGGGRGTNCWRENEQDEEIGPDGGEGFEEDNWASVVDG--GADDRLL--R 334

Query: 718 XXXXXXXXXXXXXXXXYFSDES--DEDD 795
                           YFSDES  DEDD
Sbjct: 335 SRGDGGQEKKRMKKASYFSDESGDDEDD 362


>gb|EMJ19402.1| hypothetical protein PRUPE_ppa010566mg [Prunus persica]
          Length = 245

 Score =  218 bits (556), Expect = 3e-54
 Identities = 128/250 (51%), Positives = 148/250 (59%)
 Frame = +1

Query: 37  RKGNYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXXLAPSKSTVYVSNVDYNLT 216
           +K N SD++ED+TF+YRY                        LAPSKST+YVSN+DY+LT
Sbjct: 6   KKKNSSDEDEDETFYYRYTSAPETRKPATKQSGSGSGT----LAPSKSTLYVSNLDYSLT 61

Query: 217 NSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTLR 396
           NSDLHT+FS FGK+A+VTVLK+R TRQS+GVAFV FV+R DAV A   M  KILNGR L 
Sbjct: 62  NSDLHTLFSHFGKIARVTVLKNRETRQSRGVAFVQFVSRTDAVSAAGEMHGKILNGRKLS 121

Query: 397 ASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXXXXX 576
           ASIA+DNGRA EFI+K+ YKDKSRCYECGEEGHLSYECP+N LGPRERP           
Sbjct: 122 ASIASDNGRAAEFIKKREYKDKSRCYECGEEGHLSYECPKNQLGPRERPPPKRVRRGGGG 181

Query: 577 XXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXXXXXXXX 756
                    E                 NWASVVD    A +RLL                
Sbjct: 182 GGGSAAARVE---EAEGDSGGERFEDDNWASVVD--SGADQRLL-VGEEMEEKKRKKGVK 235

Query: 757 XXXYFSDESD 786
              YFSDES+
Sbjct: 236 KSSYFSDESE 245


>ref|XP_004142290.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1-like [Cucumis sativus]
          Length = 261

 Score =  218 bits (556), Expect = 3e-54
 Identities = 129/263 (49%), Positives = 150/263 (57%), Gaps = 15/263 (5%)
 Frame = +1

Query: 52  SDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXX--------------LAPSKSTVY 189
           SD +ED+TF+YRY                                      L PSKST+Y
Sbjct: 13  SDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLY 72

Query: 190 VSNVDYNLTNSDLHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDK 369
           VSN DY+LTNSDLHT+FS FGK+A+VTVLKDR TR+S+GVAFV F+++DDAVKA K M  
Sbjct: 73  VSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHG 132

Query: 370 KILNGRTLRASIAADNGRATEFIRKKVYKDKSRCYECGE-EGHLSYECPRNFLGPRERPV 546
           KILNGR L+A+IA DNGRA EFIRK+VYKDKSRCYECG  +GHLSYECP+N LGPRERP 
Sbjct: 133 KILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPE 192

Query: 547 AXXXXXXXXXXXXXXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXX 726
                              +                 NWASVVDG+  A +RLL      
Sbjct: 193 PKRVRRGGVGARHEEDWGSDVG---------EGFEDDNWASVVDGD--ADQRLL---TGG 238

Query: 727 XXXXXXXXXXXXXYFSDESDEDD 795
                        YFSDESDEDD
Sbjct: 239 ENIVEKKKEKKASYFSDESDEDD 261


>ref|XP_004308765.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1-like [Fragaria vesca subsp. vesca]
          Length = 256

 Score =  218 bits (555), Expect = 4e-54
 Identities = 127/250 (50%), Positives = 145/250 (58%)
 Frame = +1

Query: 46  NYSDDEEDDTFFYRYXXXXXXXXXXXXXXXXXXXXXXXXLAPSKSTVYVSNVDYNLTNSD 225
           N  DD+E D+   RY                        LAPSKST+YV+N+DY+LTNSD
Sbjct: 11  NSDDDDELDSLCNRYPSAPQAQKPTKSTGSGSGSGPGSTLAPSKSTLYVANLDYSLTNSD 70

Query: 226 LHTIFSTFGKVAKVTVLKDRVTRQSKGVAFVLFVNRDDAVKAVKGMDKKILNGRTLRASI 405
           LH++FS FGK+A+VTVLKDR TR+SKGVAFV FV RDDAV + + M  KILNGR L ASI
Sbjct: 71  LHSLFSRFGKIARVTVLKDRDTRRSKGVAFVQFVTRDDAVASAREMHGKILNGRKLSASI 130

Query: 406 AADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNFLGPRERPVAXXXXXXXXXXXX 585
           AADNGRA EFI+K+ YKDKSRCYECG+EGHLSYECP+N LGPRERP              
Sbjct: 131 AADNGRAAEFIKKREYKDKSRCYECGDEGHLSYECPKNQLGPRERPPQKKPRRGGGGRGG 190

Query: 586 XXXXXYEYNLXXXXXXXXXXXXXXNWASVVDGEDAAKERLLXXXXXXXXXXXXXXXXXXX 765
                 +                 NWASVVDG   A ERLL                   
Sbjct: 191 GEARGED---EVEWESGGERFEEDNWASVVDG--GAGERLL-SEEMEEEKKRKKKVKKGG 244

Query: 766 YFSDESDEDD 795
           YFSDESD DD
Sbjct: 245 YFSDESDHDD 254