BLASTX nr result
ID: Rehmannia25_contig00015492
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00015492
(690 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004252465.1| PREDICTED: non-structural maintenance of chr... 103 5e-20
ref|XP_002304893.1| hypothetical protein POPTR_0003s21830g [Popu... 99 2e-18
ref|XP_006346663.1| PREDICTED: non-structural maintenance of chr... 97 5e-18
ref|XP_006445927.1| hypothetical protein CICLE_v10015454mg [Citr... 94 4e-17
gb|EOY32461.1| Nse4, component of Smc5/6 DNA repair complex, put... 92 1e-16
gb|EMT10783.1| hypothetical protein F775_52065 [Aegilops tauschii] 92 2e-16
ref|XP_006307701.1| hypothetical protein CARUB_v10009330mg [Caps... 91 3e-16
gb|EMS51294.1| hypothetical protein TRIUR3_21044 [Triticum urartu] 91 3e-16
gb|AFW66207.1| hypothetical protein ZEAMMB73_229055 [Zea mays] 91 3e-16
ref|XP_002453471.1| hypothetical protein SORBIDRAFT_04g006460 [S... 91 3e-16
gb|ACF85040.1| unknown [Zea mays] gi|219887363|gb|ACL54056.1| un... 91 3e-16
ref|XP_004951583.1| PREDICTED: non-structural maintenance of chr... 91 3e-16
ref|NP_001143826.1| uncharacterized protein LOC100276605 [Zea ma... 91 3e-16
gb|EPS69963.1| hypothetical protein M569_04797, partial [Genlise... 90 6e-16
gb|EEE56493.1| hypothetical protein OsJ_05737 [Oryza sativa Japo... 90 6e-16
gb|EEC72666.1| hypothetical protein OsI_06217 [Oryza sativa Indi... 90 6e-16
dbj|BAK00318.1| predicted protein [Hordeum vulgare subsp. vulgare] 90 8e-16
ref|XP_006393077.1| hypothetical protein EUTSA_v10011541mg [Eutr... 89 1e-15
ref|XP_004295144.1| PREDICTED: non-structural maintenance of chr... 89 1e-15
ref|NP_175525.1| Nse4, component of Smc5/6 DNA repair complex [A... 89 1e-15
>ref|XP_004252465.1| PREDICTED: non-structural maintenance of chromosome element 4-like
[Solanum lycopersicum]
Length = 379
Score = 103 bits (257), Expect = 5e-20
Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FLVKDGRV I VDE GS + P NGP A+ +KSG K FVFR DF DW+LMK VPEG
Sbjct: 229 FLVKDGRVVIDVDENGSHFLSPRNGPDAKLVKSGEVKYSHFVFRLDFADWELMKNAVPEG 288
Query: 508 EELMPQRDSFTNSCYDNAN-------TQPCDQDLSIPEGIPIDSRLILTAPVKKFSKNYG 350
E LMP R+ N + AN P + + P + R++ VKK S+N G
Sbjct: 289 EALMPNRNILVNPVFTEANEPNRDILVNPVITEANKPVAMDDCQRMLPITWVKKLSRNRG 348
Query: 349 RTM-----LNSCLTQIDGGTTGNWSCKRK 278
+ + ++S +I + G+ S KRK
Sbjct: 349 KVLYKASEVDSNSPEIGDASIGSGSLKRK 377
>ref|XP_002304893.1| hypothetical protein POPTR_0003s21830g [Populus trichocarpa]
gi|222842325|gb|EEE79872.1| hypothetical protein
POPTR_0003s21830g [Populus trichocarpa]
Length = 393
Score = 98.6 bits (244), Expect = 2e-18
Identities = 60/146 (41%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FLVKDGRV+IVVDE+G V P N P+ + SG FVFRFDF DWKLMK VP+G
Sbjct: 260 FLVKDGRVKIVVDESGCHFVSPRNAPAPSSVMSGEVAYRHFVFRFDFRDWKLMKGVVPDG 319
Query: 508 EELMPQRDSFTNSCYDNANTQPCDQDLSIPEGIPIDSRLILTAPVKKFSKNYGRTMLNSC 329
EELMP R+S + + D + EG SR P++KFS+N G +
Sbjct: 320 EELMPHRES--------SGASQVEPDANNTEG--TRSR----TPIRKFSRNRGLVVQEDS 365
Query: 328 LT---------QIDGGTTGNWSCKRK 278
+ +D TG C+RK
Sbjct: 366 VVVEDSPDIDDDVDARATGLMRCRRK 391
>ref|XP_006346663.1| PREDICTED: non-structural maintenance of chromosomes element 4
homolog A-like [Solanum tuberosum]
Length = 377
Score = 97.1 bits (240), Expect = 5e-18
Identities = 61/148 (41%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FLVKDGRV I VDE GS + P NGP A +KSG K FVFR DF DW+LMK VP+
Sbjct: 229 FLVKDGRVVIDVDENGSHFLSPRNGPDANLVKSGEVKYSHFVFRLDFADWELMKNAVPD- 287
Query: 508 EELMPQRDSFTNSCYDNAN-------TQPCDQDLSIPEGIPIDSRLILTAPVKKFSKNYG 350
EELMP RD N + AN P + + P + R++ VKK S+N G
Sbjct: 288 EELMPSRDISMNPVFTEANKPNRDILVNPVFTEANKPVAMDDSQRMLPITWVKKLSRNRG 347
Query: 349 RTMLNSC----LTQIDGGTTGNWSCKRK 278
+ + + +I + N S KRK
Sbjct: 348 KVLSKASEADYSPEIGDASIDNGSLKRK 375
>ref|XP_006445927.1| hypothetical protein CICLE_v10015454mg [Citrus clementina]
gi|568879420|ref|XP_006492656.1| PREDICTED:
non-structural maintenance of chromosomes element 4
homolog A-like [Citrus sinensis]
gi|557548538|gb|ESR59167.1| hypothetical protein
CICLE_v10015454mg [Citrus clementina]
Length = 405
Score = 94.0 bits (232), Expect = 4e-17
Identities = 62/145 (42%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FLVKDGRV I V+E G +V P N PSA+ + SG K FVFR+DF DWKLMK VP G
Sbjct: 271 FLVKDGRVEIAVNEHGFHLVAPRNAPSADSVMSGQVKYSHFVFRYDFKDWKLMKDVVPAG 330
Query: 508 EELMPQRDSFTNSCYDNANTQPCDQDLSI--PEGIPIDSRLILTAPVKKFSKNYGRTMLN 335
EELMP R+S NA P + S EG SR T P++K S+N G +
Sbjct: 331 EELMPHRES------SNALPVPQAEQASYNNTEGA---SR---TTPIRKLSRNRGLVIRE 378
Query: 334 SCLTQ------IDGGTTGNWSCKRK 278
+ + + +T CKRK
Sbjct: 379 ESVVEDSPEDDVAERSTRMLRCKRK 403
>gb|EOY32461.1| Nse4, component of Smc5/6 DNA repair complex, putative isoform 1
[Theobroma cacao]
Length = 391
Score = 92.4 bits (228), Expect = 1e-16
Identities = 55/142 (38%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FLVKDGR IVVD++GS +V P N P + +G FVFRFDF DWKLM + VP G
Sbjct: 260 FLVKDGRAEIVVDKSGSHIVSPKNAPGTMSVTTGEVTYSHFVFRFDFKDWKLMMSGVPVG 319
Query: 508 EELMPQRDSFTNSCYDNANTQPCDQDLSIPEGIPIDSRLILTAPVKKFSKNYGRTMLNSC 329
EELMP R+ ++S A + + + + T P++K S+N G + S
Sbjct: 320 EELMPHREE-SHSILSKAESAANNSE-----------GALTTTPIRKLSRNRGLVLQESI 367
Query: 328 L---TQIDGGTTGNW--SCKRK 278
+ +ID G+ G C+RK
Sbjct: 368 VEDSPEIDDGSKGPGIRRCRRK 389
>gb|EMT10783.1| hypothetical protein F775_52065 [Aegilops tauschii]
Length = 478
Score = 91.7 bits (226), Expect = 2e-16
Identities = 43/85 (50%), Positives = 54/85 (63%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FLVKDGRV I +D+ G +V P N P+A I SG FVFR+D+ DWKLMK VPEG
Sbjct: 353 FLVKDGRVAINIDDNGHHIVYPRNAPAASAIASGEVSYSHFVFRYDYRDWKLMKEVVPEG 412
Query: 508 EELMPQRDSFTNSCYDNANTQPCDQ 434
+ELMP R + + S + +PC Q
Sbjct: 413 QELMPHRTAHSFSAEEREQLEPCAQ 437
>ref|XP_006307701.1| hypothetical protein CARUB_v10009330mg [Capsella rubella]
gi|482576412|gb|EOA40599.1| hypothetical protein
CARUB_v10009330mg [Capsella rubella]
Length = 402
Score = 91.3 bits (225), Expect = 3e-16
Identities = 52/140 (37%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FL KDGRV I+VD+ GS +P NGP+++ + SG + FVFR DF DWKLM VP G
Sbjct: 274 FLAKDGRVEIIVDKNGSHFALPRNGPASDLVMSGEVTYNHFVFRLDFKDWKLMSEVVPLG 333
Query: 508 EELMPQRDSFTNSCYDNANTQPCDQDLSIPEGIPIDSRLILTAPVKKFSKNYGRTMLNSC 329
EELMP R++ S A + QD T P++K S+N G +
Sbjct: 334 EELMPHRETAVASSSRRAASPDFTQDSQ-------------TTPIRKLSRNRGLVVQEET 380
Query: 328 LTQIDGGTTGNWS---CKRK 278
+ + G+ + CKR+
Sbjct: 381 VVEDTPDVKGDGTRRRCKRR 400
>gb|EMS51294.1| hypothetical protein TRIUR3_21044 [Triticum urartu]
Length = 207
Score = 91.3 bits (225), Expect = 3e-16
Identities = 43/85 (50%), Positives = 54/85 (63%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FLVKDGRV I +D+ G +V P N P+A I SG FVFR+D+ DWKLMK VPEG
Sbjct: 82 FLVKDGRVAINIDDNGHHIVYPRNAPAASAIASGEVSYSHFVFRYDYRDWKLMKEVVPEG 141
Query: 508 EELMPQRDSFTNSCYDNANTQPCDQ 434
+ELMP R + + S + +PC Q
Sbjct: 142 QELMPHRTAHSLSSEEREQLEPCAQ 166
>gb|AFW66207.1| hypothetical protein ZEAMMB73_229055 [Zea mays]
Length = 464
Score = 91.3 bits (225), Expect = 3e-16
Identities = 57/138 (41%), Positives = 78/138 (56%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FLVKDGRV I VD++G +V P N P+A I SG FVFRFDF DWKLMK V EG
Sbjct: 338 FLVKDGRVEITVDDSG-HIVRPRNAPAASAIASGEVSYSHFVFRFDFKDWKLMKEVVTEG 396
Query: 508 EELMPQRDSFTNSCYDNANTQPCDQDLSIPEGIPIDSRLILTAPVKKFSKNYGRTMLNSC 329
EEL+P R S +N C + N QP +++R +T P++K ++N G + +
Sbjct: 397 EELLPHRTSQSNLC-NEENDQP-----------NLEARAQIT-PIRKLTRNRGLVLQDHV 443
Query: 328 LTQIDGGTTGNWSCKRKR 275
++ N + KR+R
Sbjct: 444 ---VEETPEENQASKRRR 458
>ref|XP_002453471.1| hypothetical protein SORBIDRAFT_04g006460 [Sorghum bicolor]
gi|241933302|gb|EES06447.1| hypothetical protein
SORBIDRAFT_04g006460 [Sorghum bicolor]
Length = 353
Score = 91.3 bits (225), Expect = 3e-16
Identities = 56/138 (40%), Positives = 77/138 (55%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FLVKDGRV I +D+ G +V P N P+A I SG FVFRFDF DWKLMK V EG
Sbjct: 226 FLVKDGRVEINIDDNGHHIVRPRNAPAASAIASGEVSYSHFVFRFDFKDWKLMKEAVKEG 285
Query: 508 EELMPQRDSFTNSCYDNANTQPCDQDLSIPEGIPIDSRLILTAPVKKFSKNYGRTMLNSC 329
EEL+P R S + C + N QP +++R +T P++K S+N G + ++
Sbjct: 286 EELLPHRTSQSALC-NEENYQP-----------NMEARAQVT-PIRKLSRNRGLILQDNV 332
Query: 328 LTQIDGGTTGNWSCKRKR 275
++ N + KR+R
Sbjct: 333 ---VEETPEENQASKRRR 347
>gb|ACF85040.1| unknown [Zea mays] gi|219887363|gb|ACL54056.1| unknown [Zea mays]
Length = 352
Score = 91.3 bits (225), Expect = 3e-16
Identities = 57/138 (41%), Positives = 78/138 (56%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FLVKDGRV I VD++G +V P N P+A I SG FVFRFDF DWKLMK V EG
Sbjct: 226 FLVKDGRVEITVDDSG-HIVRPRNAPAASAIASGEVSYSHFVFRFDFKDWKLMKEVVTEG 284
Query: 508 EELMPQRDSFTNSCYDNANTQPCDQDLSIPEGIPIDSRLILTAPVKKFSKNYGRTMLNSC 329
EEL+P R S +N C + N QP +++R +T P++K ++N G + +
Sbjct: 285 EELLPHRTSQSNLC-NEENDQP-----------NLEARAQIT-PIRKLTRNRGLVLQDHV 331
Query: 328 LTQIDGGTTGNWSCKRKR 275
++ N + KR+R
Sbjct: 332 ---VEETPEENQASKRRR 346
>ref|XP_004951583.1| PREDICTED: non-structural maintenance of chromosome element 4-like
isoform X1 [Setaria italica]
Length = 353
Score = 90.9 bits (224), Expect = 3e-16
Identities = 54/141 (38%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FLVKDGRV I +D+ G +V P N P+A ++ SG FVFRFDF DWKLMK V EG
Sbjct: 226 FLVKDGRVEINIDDNGHHIVRPRNAPAASDVASGDVSYSHFVFRFDFKDWKLMKELVSEG 285
Query: 508 EELMPQRDSFTNSC---YDNANTQPCDQDLSIPEGIPIDSRLILTAPVKKFSKNYGRTML 338
EEL+P R S +C D N + C Q P++K ++N G +
Sbjct: 286 EELLPHRTSQGATCTEENDQPNLEACAQ----------------RTPIRKLTRNRGLVLQ 329
Query: 337 NSCLTQIDGGTTGNWSCKRKR 275
+ + N + KRKR
Sbjct: 330 EQVVQET---PEENQTSKRKR 347
>ref|NP_001143826.1| uncharacterized protein LOC100276605 [Zea mays]
gi|195627798|gb|ACG35729.1| hypothetical protein [Zea
mays]
Length = 352
Score = 90.9 bits (224), Expect = 3e-16
Identities = 53/113 (46%), Positives = 68/113 (60%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FLVKDGRV I VD++G +V P N P+A I SG FVFRFDF DWKLMK V EG
Sbjct: 226 FLVKDGRVEITVDDSG-HIVRPRNAPAASAIASGEVSYSHFVFRFDFKDWKLMKEVVTEG 284
Query: 508 EELMPQRDSFTNSCYDNANTQPCDQDLSIPEGIPIDSRLILTAPVKKFSKNYG 350
EEL+P R S +N C + N QP +++R +T P++K ++N G
Sbjct: 285 EELLPHRTSQSNLC-NEENDQP-----------NLEARAQIT-PIRKLTRNRG 324
>gb|EPS69963.1| hypothetical protein M569_04797, partial [Genlisea aurea]
Length = 333
Score = 90.1 bits (222), Expect = 6e-16
Identities = 40/67 (59%), Positives = 49/67 (73%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FL+KDGR ++ VDE G V P NGP+AEEI+SG H F+FR+DF+DWKLM + V G
Sbjct: 216 FLIKDGRAQVSVDEIGCHTVSPKNGPTAEEIRSGEVNYHHFIFRYDFEDWKLMLSCVKNG 275
Query: 508 EELMPQR 488
EELMP R
Sbjct: 276 EELMPHR 282
>gb|EEE56493.1| hypothetical protein OsJ_05737 [Oryza sativa Japonica Group]
Length = 360
Score = 90.1 bits (222), Expect = 6e-16
Identities = 52/138 (37%), Positives = 71/138 (51%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FLVKDGRV I +D+ G +V P N P+A I SG FVFRFDF DWKLM+ VP+G
Sbjct: 228 FLVKDGRVAINIDDNGHHIVYPRNAPAASAIASGEVSYSHFVFRFDFKDWKLMQEVVPDG 287
Query: 508 EELMPQRDSFTNSCYDNANTQPCDQDLSIPEGIPIDSRLILTAPVKKFSKNYGRTMLNSC 329
EELMP R N PC +D + + ++ P++K ++N G M
Sbjct: 288 EELMPHR---------NPENIPCAEDHDQADPPELCAQ---RTPIRKLTRNRGLVMQQDQ 335
Query: 328 LTQIDGGTTGNWSCKRKR 275
+ + + KR+R
Sbjct: 336 MVVAETPEEKQPTSKRRR 353
>gb|EEC72666.1| hypothetical protein OsI_06217 [Oryza sativa Indica Group]
Length = 360
Score = 90.1 bits (222), Expect = 6e-16
Identities = 52/138 (37%), Positives = 71/138 (51%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FLVKDGRV I +D+ G +V P N P+A I SG FVFRFDF DWKLM+ VP+G
Sbjct: 228 FLVKDGRVAINIDDNGHHIVYPRNAPAASAIASGEVSYSHFVFRFDFKDWKLMQEVVPDG 287
Query: 508 EELMPQRDSFTNSCYDNANTQPCDQDLSIPEGIPIDSRLILTAPVKKFSKNYGRTMLNSC 329
EELMP R N PC +D + + ++ P++K ++N G M
Sbjct: 288 EELMPHR---------NPENIPCAEDHDQADPPELCAQ---RTPIRKLTRNRGLVMQQDQ 335
Query: 328 LTQIDGGTTGNWSCKRKR 275
+ + + KR+R
Sbjct: 336 MVVAETPEEKQPTSKRRR 353
>dbj|BAK00318.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 359
Score = 89.7 bits (221), Expect = 8e-16
Identities = 43/85 (50%), Positives = 53/85 (62%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FLVKDGRV I +D+ G +V P N P+A I SG FVFR+D+ DWKLMK V EG
Sbjct: 234 FLVKDGRVAINIDDNGHHIVYPRNAPAASAIASGEVSYSHFVFRYDYRDWKLMKEVVAEG 293
Query: 508 EELMPQRDSFTNSCYDNANTQPCDQ 434
EELMP R + + S + +PC Q
Sbjct: 294 EELMPHRTAHSLSAEEREQLEPCAQ 318
>ref|XP_006393077.1| hypothetical protein EUTSA_v10011541mg [Eutrema salsugineum]
gi|557089655|gb|ESQ30363.1| hypothetical protein
EUTSA_v10011541mg [Eutrema salsugineum]
Length = 402
Score = 89.4 bits (220), Expect = 1e-15
Identities = 54/141 (38%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FL KDGRV I+VD++GS +P N PSA + SG + FVFR DF DWKLM VP G
Sbjct: 274 FLAKDGRVEIIVDKSGSHFALPRNAPSANLVMSGEVMYNHFVFRLDFKDWKLMSEMVPMG 333
Query: 508 EELMPQRD-SFTNSCYDNANTQPCDQDLSIPEGIPIDSRLILTAPVKKFSKNYGRTMLNS 332
EELMP R+ + +S +A+ G DS+ T P++K S+N G +
Sbjct: 334 EELMPHREIAIASSSCPSASA-----------GFTQDSQ---TTPIRKLSRNRGLVVQEE 379
Query: 331 CLTQIDGGTTGNWS---CKRK 278
+ + G+ + CKR+
Sbjct: 380 TVVEDSPDMEGDGTRRRCKRR 400
>ref|XP_004295144.1| PREDICTED: non-structural maintenance of chromosome element 4-like
[Fragaria vesca subsp. vesca]
Length = 384
Score = 89.4 bits (220), Expect = 1e-15
Identities = 55/144 (38%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FLVKDGR I+VD V P N A E+ S FVFRFDF DWKLMK VP+G
Sbjct: 253 FLVKDGRAEIIVDANCCHFVAPRNAAKATEVASREVVYRHFVFRFDFKDWKLMKDMVPDG 312
Query: 508 EELMPQRDSFTNSCYDNANTQPCDQDLSIPEGIPIDSRLILTAPVKKFSKNYGRTMLNSC 329
EELMP R N++P Q+ E S+ T P++K S+N GR +
Sbjct: 313 EELMPHRVP--------PNSEPASQE----EPAAYSSQTGHTTPIRKLSRNRGRVVQEEA 360
Query: 328 LT----QIDGGTTGNWSCKRKRSV 269
+ + D G G + KR +
Sbjct: 361 VVEESPECDNGHAGGTFRRSKRKL 384
>ref|NP_175525.1| Nse4, component of Smc5/6 DNA repair complex [Arabidopsis thaliana]
gi|75169065|sp|Q9C689.1|NSE4A_ARATH RecName:
Full=Non-structural maintenance of chromosomes element 4
homolog A; Short=Non-SMC element 4 homolog A
gi|12320790|gb|AAG50545.1|AC079828_16 hypothetical
protein [Arabidopsis thaliana]
gi|28393397|gb|AAO42122.1| unknown protein [Arabidopsis
thaliana] gi|29824223|gb|AAP04072.1| unknown protein
[Arabidopsis thaliana] gi|332194504|gb|AEE32625.1| Nse4,
component of Smc5/6 DNA repair complex [Arabidopsis
thaliana]
Length = 403
Score = 89.4 bits (220), Expect = 1e-15
Identities = 52/140 (37%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Frame = -3
Query: 688 FLVKDGRVRIVVDETGSEVVVPTNGPSAEEIKSGVAKSHQFVFRFDFDDWKLMKTHVPEG 509
FL KDGRV I+VD++GS +P N P A + SG + FVFR DF DWKLM VP G
Sbjct: 269 FLAKDGRVEIIVDKSGSHFAMPRNAPDANVVMSGEVIYNHFVFRLDFKDWKLMSEMVPLG 328
Query: 508 EELMPQRDSFTNSCYDNANTQPCDQDLSIPEGIPIDSRLILTAPVKKFSKNYGRTMLNSC 329
EELMP R + S A + P D ++ T P++K S+N G +
Sbjct: 329 EELMPHRQTAVASSSCPAASAPASADF---------TQDTQTTPIRKLSRNRGLVVQEET 379
Query: 328 LTQIDGGTTGNWS---CKRK 278
+ + G+ + CKR+
Sbjct: 380 VVEDTPDKEGDGTRRRCKRR 399