BLASTX nr result
ID: Rehmannia25_contig00015384
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00015384
(435 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A... 121 8e-26
ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314... 113 3e-23
gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat... 106 4e-21
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A... 103 3e-20
ref|XP_006493638.1| PREDICTED: putative ribonuclease H protein A... 86 4e-15
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 86 4e-15
ref|XP_002522932.1| conserved hypothetical protein [Ricinus comm... 83 3e-14
ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein A... 82 1e-13
ref|XP_004305739.1| PREDICTED: uncharacterized protein LOC101306... 81 2e-13
ref|XP_006596757.1| PREDICTED: putative ribonuclease H protein A... 80 4e-13
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas... 80 4e-13
ref|XP_006596869.1| PREDICTED: putative ribonuclease H protein A... 78 1e-12
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 78 1e-12
gb|EOY20770.1| Ribonuclease H protein [Theobroma cacao] 77 2e-12
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 77 2e-12
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 77 2e-12
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 77 2e-12
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr... 77 2e-12
gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe... 76 4e-12
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 76 5e-12
>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 872
Score = 121 bits (304), Expect = 8e-26
Identities = 54/135 (40%), Positives = 85/135 (62%)
Frame = +2
Query: 2 VTLIRRLDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAW 181
V+L+R++++ RNF+W+GDI K+G+ VSW CAP EGGLGL+ + +N+S +++ W
Sbjct: 317 VSLLRKVERWCRNFLWSGDIDKRGIPLVSWTSCCAPIDEGGLGLKKLDVLNSSLLLKRCW 376
Query: 182 DILASGSLAACFLRSRFLDRSLEPKASPITSSLWSGFRPYITSLKRDSRWIIGDGTSISF 361
+I S CF+R+RF R S SS+W G R + ++ ++RW++G G ISF
Sbjct: 377 EIFTSSFEGCCFIRNRFSKR-----RSYAPSSIWPGVRKFWGLVQNNTRWLVGTGDKISF 431
Query: 362 WWDNWLGYRIADKMG 406
W DN+LG + + G
Sbjct: 432 WRDNFLGRPLIEFFG 446
>ref|XP_004295654.1| PREDICTED: uncharacterized protein LOC101314263 [Fragaria vesca
subsp. vesca]
Length = 839
Score = 113 bits (282), Expect = 3e-23
Identities = 50/126 (39%), Positives = 77/126 (61%)
Frame = +2
Query: 56 DITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAWDILASGSLAACFLRSRFL 235
+++ + V+W + CAP EGGLG+R+I ++N +F+++ WD L + AA F +RFL
Sbjct: 423 NVSCRAYYPVAWKKCCAPLKEGGLGVRNIMALNQAFLLKKFWDFLTKSTTAAAFFSARFL 482
Query: 236 DRSLEPKASPITSSLWSGFRPYITSLKRDSRWIIGDGTSISFWWDNWLGYRIADKMGVPI 415
RS +P + SS+W G RP T + +S+W++G+G SI FW NWL I DK+G+
Sbjct: 483 QRSGQPCSYYKRSSIWPGMRPLFTDILYNSKWVVGNGHSIDFWHGNWLNGSIIDKLGIVH 542
Query: 416 SFRKRL 433
K L
Sbjct: 543 QLGKSL 548
>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
Length = 480
Score = 106 bits (264), Expect = 4e-21
Identities = 48/134 (35%), Positives = 75/134 (55%)
Frame = +2
Query: 8 LIRRLDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAWDI 187
L+ +LD +NFIW+GDI + TVSW MC P GGL ++ +N S ++ +AW
Sbjct: 288 LLHQLDSWIKNFIWSGDIYTHKVCTVSWKVMCRPWAAGGLDIKPTCLINESLILLLAWQF 347
Query: 188 LASGSLAACFLRSRFLDRSLEPKASPITSSLWSGFRPYITSLKRDSRWIIGDGTSISFWW 367
+ S A + RFL P SS+W G + +++++ +S WI+G G +I+ W
Sbjct: 348 STADSQWAALMHHRFLKHG-TPLQHYFLSSMWGGIKEHLSTISSNSIWIVGTGANINLWT 406
Query: 368 DNWLGYRIADKMGV 409
DNWLG R+ D + +
Sbjct: 407 DNWLGIRLVDSLNI 420
>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 751
Score = 103 bits (256), Expect = 3e-20
Identities = 53/136 (38%), Positives = 77/136 (56%), Gaps = 1/136 (0%)
Frame = +2
Query: 5 TLIRRLDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAWD 184
+L+ L ARNFIW+GD+ + LVT+SW ++C P E GL LR++ ++ + ++ +AW
Sbjct: 258 SLLSHLSACARNFIWSGDLAIRKLVTISWQQVCTPRNEAGLDLRNLKALYTAGLISLAWQ 317
Query: 185 ILASGSLAACFLRSRF-LDRSLEPKASPITSSLWSGFRPYITSLKRDSRWIIGDGTSISF 361
L S F RF + R + K TSS+W G + + L SRWIIGDG SI F
Sbjct: 318 TLLQSSSWGSFACRRFTIFRHM--KFQYFTSSVWHGLKRVLPLLFEHSRWIIGDGNSILF 375
Query: 362 WWDNWLGYRIADKMGV 409
W D WL I ++ +
Sbjct: 376 WSDKWLHSSIIQQLNM 391
>ref|XP_006493638.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 360
Score = 86.3 bits (212), Expect = 4e-15
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Frame = +2
Query: 17 RLDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAWDILAS 196
++DQA R FIW+G KK + V W +C GGLGL+ ++ MN + +M++ W ++AS
Sbjct: 65 KIDQACRRFIWSGAADKKKISLVKWDTICQLKPSGGLGLKQLNLMNDALLMKIGWVLIAS 124
Query: 197 -GSLAACFLRSRFLDRSLEPKASPIT------SSLWSGFRPYITSLKRDSRWIIGDGTSI 355
SL L S++ L P A P T S +W + + +W IG+G +
Sbjct: 125 PNSLWVKVLLSKY---GLAPNALPSTLPTKCGSYMWKAVGGIWHEVLKGIKWDIGNGNRV 181
Query: 356 SFWWDNWL 379
FWWDNW+
Sbjct: 182 RFWWDNWV 189
>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 86.3 bits (212), Expect = 4e-15
Identities = 39/106 (36%), Positives = 67/106 (63%)
Frame = +2
Query: 65 KKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAWDILASGSLAACFLRSRFLDRS 244
K + TVSW +C P +EGGL ++S +N + M+++AW++L+S S A L+ RF +
Sbjct: 770 KPKVCTVSWKILCRPWSEGGLDIKSTRLINNAAMLKLAWNLLSSNSQWAVLLKRRFFSQG 829
Query: 245 LEPKASPITSSLWSGFRPYITSLKRDSRWIIGDGTSISFWWDNWLG 382
+P + SS+W G + +++ L+++ WI+G G I+ W +NWLG
Sbjct: 830 -QPIRYFVKSSVWHGVKNHMSILRQNKLWIVGTGDRINLWTNNWLG 874
>ref|XP_002522932.1| conserved hypothetical protein [Ricinus communis]
gi|223537826|gb|EEF39443.1| conserved hypothetical
protein [Ricinus communis]
Length = 303
Score = 83.2 bits (204), Expect = 3e-14
Identities = 39/108 (36%), Positives = 65/108 (60%)
Frame = +2
Query: 5 TLIRRLDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAWD 184
+L++ +++A RNF+WTG ++ K LVTV W C P +EGG+GL+ + +N + + R+AW
Sbjct: 200 SLLKSIEKAIRNFLWTGSVSYKKLVTVKWGHCCKPISEGGIGLKRLDVLNRTMLCRIAWK 259
Query: 185 ILASGSLAACFLRSRFLDRSLEPKASPITSSLWSGFRPYITSLKRDSR 328
++ S FLRSR+L S P++S + W R + L+ S+
Sbjct: 260 FYSNDSFVYRFLRSRYLVASGVPRSSLV----WPSIRELYSKLQATSQ 303
>ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 768
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Frame = +2
Query: 17 RLDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAWDILAS 196
+LDQ R F+W+G+ + + VSW +C P GGLG + + MN + ++++AW ++
Sbjct: 247 KLDQICRRFLWSGNDELRKMSLVSWHNICQPKMAGGLGFKRLDIMNEALLLKVAWHLITE 306
Query: 197 -GSLAACFLRSRFLDRSLE-PKASPIT--SSLWSGFRPYITSLKRDSRWIIGDGTSISFW 364
L L +++ LE P P S LW KR RWI+G+G + FW
Sbjct: 307 PNKLCVQVLSTKYGVPPLEIPHTLPTRYGSHLWKSVGRVWDYAKRGIRWIVGNGWKVKFW 366
Query: 365 WDNW 376
WD W
Sbjct: 367 WDCW 370
>ref|XP_004305739.1| PREDICTED: uncharacterized protein LOC101306660 [Fragaria vesca
subsp. vesca]
Length = 330
Score = 80.9 bits (198), Expect = 2e-13
Identities = 42/143 (29%), Positives = 67/143 (46%)
Frame = +2
Query: 5 TLIRRLDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAWD 184
T+++++ RNFIWTG+++ + V+W + CAP EGGLG+R+I ++N +F+++ WD
Sbjct: 183 TVLQQVRNWIRNFIWTGNVSCRAYYPVAWKKCCAPLKEGGLGVRNIMALNQAFLLKKFWD 242
Query: 185 ILASGSLAACFLRSRFLDRSLEPKASPITSSLWSGFRPYITSLKRDSRWIIGDGTSISFW 364
L + AA ++G+G SI FW
Sbjct: 243 FLTKSTTAA----------------------------------------VVGNGHSIDFW 262
Query: 365 WDNWLGYRIADKMGVPISFRKRL 433
NWL I DK+G+ K L
Sbjct: 263 HGNWLNGSIIDKLGIAHQLGKSL 285
>ref|XP_006596757.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 207
Score = 79.7 bits (195), Expect = 4e-13
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 8/144 (5%)
Frame = +2
Query: 5 TLIRRLDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAWD 184
T+I+RL R F+W G++ K + V+W ++CAP +GGLG++ I + N + +++ W
Sbjct: 61 TIIKRLTAIQRQFLWGGNLEGKKIAWVAWNQVCAPKEKGGLGVKDIKAFNRALLIKWKWL 120
Query: 185 IL-ASGSLAACFLRSRFLD-RSLEP-KASPITSSLWSGFRPY-----ITSLKRDSRWIIG 340
+ L + L S++ R LE I SS WS R + ++ + RW +G
Sbjct: 121 MFQQQDHLWSIILTSKYRGWRGLEEGPPKQIFSSWWSDLRSVTQHSSMAAVNKHFRWNLG 180
Query: 341 DGTSISFWWDNWLGYRIADKMGVP 412
G I FW D+W+G IA K P
Sbjct: 181 SGDQILFWEDSWVGEGIALKDKYP 204
>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 528
Score = 79.7 bits (195), Expect = 4e-13
Identities = 32/63 (50%), Positives = 50/63 (79%)
Frame = +2
Query: 8 LIRRLDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAWDI 187
L++ L+ RNFIW+GDITK+ LVTV+W ++C P ++GGLG+RS+S +NA+ +++ WD+
Sbjct: 466 LLKELETCFRNFIWSGDITKRKLVTVAWKKLCKPQSQGGLGIRSLSQLNAAGNLKLCWDM 525
Query: 188 LAS 196
L S
Sbjct: 526 LHS 528
>ref|XP_006596869.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 430
Score = 77.8 bits (190), Expect = 1e-12
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 11/147 (7%)
Frame = +2
Query: 5 TLIRRLDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAW- 181
T+I+RL R F+W G++ K + V+W ++CAP +GGLG++ I + N + +++ W
Sbjct: 134 TIIKRLTAIQRQFLWDGNLEGKKIAWVAWNQVCAPKEKGGLGVKDIKAFNRALLIKWKWL 193
Query: 182 -----DILASGSLAACFLRSRFLDRSLEPKASPITSSLWSGFRPY-----ITSLKRDSRW 331
D L S L + + R L+ E I SS WS R + ++ + RW
Sbjct: 194 MFQQQDHLWSKILTSKYRGWRGLE---EGPPKQIFSSWWSDLRSVTQHSSMAAVNKHFRW 250
Query: 332 IIGDGTSISFWWDNWLGYRIADKMGVP 412
+G I FW D+W+G IA K P
Sbjct: 251 NLGSDDQILFWEDSWVGEGIALKDKYP 277
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 77.8 bits (190), Expect = 1e-12
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Frame = +2
Query: 20 LDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAWDILAS- 196
LD+ +R+F+W +T++ +SW R+C P +EGGLG+R MN + + ++ W ++
Sbjct: 343 LDKVSRSFLWGSSVTQRKQHLISWKRVCKPRSEGGLGIRKAQDMNKALLSKVGWRLIQDY 402
Query: 197 GSLAACFLRSRFLDRSLE----PKASPITSSLWS----GFRPYITSLKRDSRWIIGDGTS 352
SL A +R + + + K + SS W G R + W+IGDG
Sbjct: 403 HSLWARIMRCNYRVQDVRDGAWTKVRSVCSSTWRSVALGMREVVIP---GLSWVIGDGRE 459
Query: 353 ISFWWDNWL 379
I FW D WL
Sbjct: 460 ILFWMDKWL 468
>gb|EOY20770.1| Ribonuclease H protein [Theobroma cacao]
Length = 370
Score = 77.4 bits (189), Expect = 2e-12
Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Frame = +2
Query: 2 VTLIRRLDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAW 181
+++ +++++ RNF+W D + + + + W ++C P EGG+G+R + MN +F++++ W
Sbjct: 8 LSICQKIERLCRNFLWGSDESHRKIHLIKWEQLCRPKDEGGMGIRKLKLMNEAFLLKLLW 67
Query: 182 DILASGS-LAACFLRSRF---LDRSLEPKASPITSSLWSGFRPYITSLKRDSRWIIGDGT 349
+ L A L R+ R LE S+LW+ + +R +IGDG
Sbjct: 68 QLRERQKVLWARILCKRYNINTTRRLESIQRSGASNLWTAVSRLWPVVASATRCVIGDGM 127
Query: 350 SISFWWDNWLGYRIADKM 403
S++F D WLG R K+
Sbjct: 128 SVNFSKDKWLGDRTLAKI 145
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Frame = +2
Query: 2 VTLIRRLDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAW 181
V+ +D+ RNF+W D + L +V+W +C P EGGLGLR N +F+ +MAW
Sbjct: 1348 VSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAW 1407
Query: 182 DILAS-GSLAACFLRSRFLDRS--LEPKASPITSSLWSGFRPYITSLKRDSRWIIGDGTS 352
I ++ L LR +++ + L ++ S W L +W +G+G
Sbjct: 1408 QIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRK 1467
Query: 353 ISFWWDNWLG 382
I+FW D W+G
Sbjct: 1468 INFWNDWWVG 1477
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Frame = +2
Query: 2 VTLIRRLDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAW 181
V+ +D+ RNF+W D + L +V+W +C P EGGLGLR N +F+ +MAW
Sbjct: 816 VSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAW 875
Query: 182 DILAS-GSLAACFLRSRFLDRS--LEPKASPITSSLWSGFRPYITSLKRDSRWIIGDGTS 352
I ++ L LR +++ + L ++ S W L +W +G+G
Sbjct: 876 QIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRK 935
Query: 353 ISFWWDNWLG 382
I+FW D W+G
Sbjct: 936 INFWNDWWVG 945
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Frame = +2
Query: 2 VTLIRRLDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAW 181
V+ +D+ RNF+W D + L +V+W +C P EGGLGLR N +F+ +MAW
Sbjct: 816 VSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAW 875
Query: 182 DILAS-GSLAACFLRSRFLDRS--LEPKASPITSSLWSGFRPYITSLKRDSRWIIGDGTS 352
I ++ L LR +++ + L ++ S W L +W +G+G
Sbjct: 876 QIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRK 935
Query: 353 ISFWWDNWLG 382
I+FW D W+G
Sbjct: 936 INFWNDWWVG 945
>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
Length = 620
Score = 77.0 bits (188), Expect = 2e-12
Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Frame = +2
Query: 5 TLIRRLDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAWD 184
+++ RLDQ +R F+W KK V W ++C+P EGGLG+R+ SMN + + ++ W
Sbjct: 61 SILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWR 120
Query: 185 IL-ASGSLAACFLRSRFL------DRSLEPKASPITSSLWS----GFRPYITSLKRDSRW 331
+L SL L+ ++ R L PK S SS W G R ++ W
Sbjct: 121 LLQEKNSLWTLVLQKKYHVGEIRDSRWLIPKGS--WSSTWRSIAIGLRDVVS---HGVGW 175
Query: 332 IIGDGTSISFWWDNWL 379
I GDG I FW D W+
Sbjct: 176 IPGDGQQIRFWTDRWV 191
>gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Frame = +2
Query: 20 LDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAWDILAS- 196
L++ F W K + ++W R+CAP EGGLG R++ + N + + + W +L +
Sbjct: 463 LNKLVAQFWWNSSTENKKIHWMAWDRLCAPKEEGGLGFRNLHAFNLALLAKQGWRLLQNP 522
Query: 197 GSLAACFLRSRFLDRS--LEPKASPITSSLWSGFRPYITSLKRDSRWIIGDGTSISFWWD 370
SL L++++ LE SP S +W T + + SRW +G G +I W D
Sbjct: 523 DSLVTKVLKAKYFPTRSFLETTVSPYASVVWKSLCDARTVIIQGSRWQVGSGDTIGIWED 582
Query: 371 NWL 379
WL
Sbjct: 583 RWL 585
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Frame = +2
Query: 11 IRRLDQAARNFIWTGDITKKGLVTVSWVRMCAPTTEGGLGLRSISSMNASFMMRMAWDIL 190
I++++ F+W+ I KKG+ V+W ++C P EGG+GLR + N + +RM W +
Sbjct: 726 IKKIESLCSRFLWSSRIDKKGIAKVAWSQVCLPKAEGGIGLRRFAVSNRTLYLRMIWLLF 785
Query: 191 A-SGSLAACFLRSRFLDRSL---EPKASPITSSLWSGFRPYITSLKRDSRWIIGDGTSIS 358
+ SGSL + + L +S P S W +R R +G+G S
Sbjct: 786 SNSGSLWVAWHKQHSLGKSTSFWNQPEKPHDSWNWKCLLRLRVVAERFIRCNVGNGRDAS 845
Query: 359 FWWDNW 376
FW+DNW
Sbjct: 846 FWFDNW 851