BLASTX nr result
ID: Rehmannia25_contig00014958
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00014958
(403 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI25652.3| unnamed protein product [Vitis vinifera] 86 7e-15
emb|CBI25651.3| unnamed protein product [Vitis vinifera] 86 7e-15
ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, I... 86 7e-15
ref|XP_003534102.1| PREDICTED: DNA-directed RNA polymerases II, ... 84 2e-14
ref|XP_006392763.1| hypothetical protein EUTSA_v10011934mg [Eutr... 82 9e-14
gb|EOY26301.1| DNA directed RNA polymerase, 7 kDa subunit [Theob... 82 9e-14
ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, I... 80 2e-13
ref|XP_002527516.1| DNA-directed RNA polymerases I, II, and III ... 80 2e-13
tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III ... 80 4e-13
ref|XP_006284887.1| hypothetical protein CARUB_v10006178mg, part... 79 5e-13
ref|NP_198917.1| DNA-directed RNA polymerase NRPB12/NRPD12/NRPE1... 79 5e-13
ref|XP_006405406.1| hypothetical protein EUTSA_v10028022mg [Eutr... 79 6e-13
ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp.... 79 8e-13
ref|XP_004248221.1| PREDICTED: DNA-directed RNA polymerases I, I... 78 1e-12
gb|EEE62363.1| hypothetical protein OsJ_17152 [Oryza sativa Japo... 78 1e-12
gb|EEC78536.1| hypothetical protein OsI_18488 [Oryza sativa Indi... 78 1e-12
ref|NP_001151371.1| LOC100285004 [Zea mays] gi|297720059|ref|NP_... 78 1e-12
ref|XP_004972669.1| PREDICTED: DNA-directed RNA polymerases I, I... 77 2e-12
ref|XP_004492394.1| PREDICTED: DNA-directed RNA polymerases I, I... 75 7e-12
ref|XP_003595899.1| DNA-directed RNA polymerases I, II, and III ... 75 7e-12
>emb|CBI25652.3| unnamed protein product [Vitis vinifera]
Length = 40
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = -2
Query: 300 MDPQPEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
MDPQPEPV+YICGDCGQENTLKPGDVIQCRECGYRIL
Sbjct: 1 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRIL 37
>emb|CBI25651.3| unnamed protein product [Vitis vinifera]
Length = 82
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = -2
Query: 300 MDPQPEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
MDPQPEPV+YICGDCGQENTLKPGDVIQCRECGYRIL
Sbjct: 1 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRIL 37
>ref|XP_002267800.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Vitis vinifera]
gi|225468167|ref|XP_002272054.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC4 [Vitis
vinifera] gi|297738145|emb|CBI27346.3| unnamed protein
product [Vitis vinifera]
Length = 51
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = -2
Query: 300 MDPQPEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
MDPQPEPV+YICGDCGQENTLKPGDVIQCRECGYRIL
Sbjct: 1 MDPQPEPVSYICGDCGQENTLKPGDVIQCRECGYRIL 37
>ref|XP_003534102.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
12-like [Glycine max] gi|356560019|ref|XP_003548293.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 12 [Glycine max]
gi|567912183|ref|XP_006448405.1| hypothetical protein
CICLE_v10017429mg [Citrus clementina]
gi|255630274|gb|ACU15492.1| unknown [Glycine max]
gi|557551016|gb|ESR61645.1| hypothetical protein
CICLE_v10017429mg [Citrus clementina]
gi|561025849|gb|ESW24534.1| hypothetical protein
PHAVU_004G138700g [Phaseolus vulgaris]
Length = 51
Score = 83.6 bits (205), Expect = 2e-14
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = -2
Query: 300 MDPQPEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
MDPQPEPV+YICGDCG ENTLKPGDVIQCRECGYRIL
Sbjct: 1 MDPQPEPVSYICGDCGMENTLKPGDVIQCRECGYRIL 37
>ref|XP_006392763.1| hypothetical protein EUTSA_v10011934mg [Eutrema salsugineum]
gi|567131670|ref|XP_006392764.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|567131674|ref|XP_006392765.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|557089341|gb|ESQ30049.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|557089342|gb|ESQ30050.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
gi|557089343|gb|ESQ30051.1| hypothetical protein
EUTSA_v10011934mg [Eutrema salsugineum]
Length = 51
Score = 81.6 bits (200), Expect = 9e-14
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = -2
Query: 300 MDPQPEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
MDPQPEPV Y+CGDCGQENTLK GDVIQCRECGYRIL
Sbjct: 1 MDPQPEPVTYVCGDCGQENTLKSGDVIQCRECGYRIL 37
>gb|EOY26301.1| DNA directed RNA polymerase, 7 kDa subunit [Theobroma cacao]
Length = 51
Score = 81.6 bits (200), Expect = 9e-14
Identities = 35/37 (94%), Positives = 35/37 (94%)
Frame = -2
Query: 300 MDPQPEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
MDPQPEPV YICGDCGQENTLK GDVIQCRECGYRIL
Sbjct: 1 MDPQPEPVTYICGDCGQENTLKHGDVIQCRECGYRIL 37
>ref|XP_004137531.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Cucumis sativus]
gi|449516854|ref|XP_004165461.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC4-like
[Cucumis sativus]
Length = 51
Score = 80.5 bits (197), Expect = 2e-13
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = -2
Query: 300 MDPQPEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
MDPQPEPV+YICGDCG ENTLK GDVIQCRECGYRIL
Sbjct: 1 MDPQPEPVSYICGDCGMENTLKQGDVIQCRECGYRIL 37
>ref|XP_002527516.1| DNA-directed RNA polymerases I, II, and III 7.0 kDa polypeptide,
putative [Ricinus communis] gi|223533156|gb|EEF34914.1|
DNA-directed RNA polymerases I, II, and III 7.0 kDa
polypeptide, putative [Ricinus communis]
Length = 51
Score = 80.5 bits (197), Expect = 2e-13
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = -2
Query: 300 MDPQPEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
MDPQPEPV+YICGDCG ENTLK GDVIQCRECGYRIL
Sbjct: 1 MDPQPEPVSYICGDCGMENTLKQGDVIQCRECGYRIL 37
>tpg|DAA60457.1| TPA: DNA-directed RNA polymerase I, II, and III polypeptide isoform
1, partial [Zea mays] gi|414884444|tpg|DAA60458.1| TPA:
DNA-directed RNA polymerase I, II, and III polypeptide
isoform 2, partial [Zea mays]
Length = 100
Score = 79.7 bits (195), Expect = 4e-13
Identities = 35/39 (89%), Positives = 37/39 (94%), Gaps = 1/39 (2%)
Frame = -2
Query: 303 TMDPQ-PEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
TMDPQ PEPV+Y+CGDCG ENTLKPGDVIQCRECGYRIL
Sbjct: 48 TMDPQQPEPVSYLCGDCGAENTLKPGDVIQCRECGYRIL 86
>ref|XP_006284887.1| hypothetical protein CARUB_v10006178mg, partial [Capsella rubella]
gi|482553592|gb|EOA17785.1| hypothetical protein
CARUB_v10006178mg, partial [Capsella rubella]
Length = 68
Score = 79.3 bits (194), Expect = 5e-13
Identities = 35/39 (89%), Positives = 36/39 (92%), Gaps = 1/39 (2%)
Frame = -2
Query: 303 TMD-PQPEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
TMD P PEPV Y+CGDCGQENTLKPGDVIQCRECGYRIL
Sbjct: 16 TMDQPLPEPVTYVCGDCGQENTLKPGDVIQCRECGYRIL 54
>ref|NP_198917.1| DNA-directed RNA polymerase NRPB12/NRPD12/NRPE12 [Arabidopsis
thaliana] gi|75171496|sp|Q9FLM8.1|NRPBC_ARATH RecName:
Full=DNA-directed RNA polymerases II, IV and V subunit
12; AltName: Full=DNA-directed RNA Polymerase II subunit
K gi|9759147|dbj|BAB09703.1| unnamed protein product
[Arabidopsis thaliana] gi|15028303|gb|AAK76628.1|
unknown protein [Arabidopsis thaliana]
gi|19310615|gb|AAL85038.1| unknown protein [Arabidopsis
thaliana] gi|21618239|gb|AAM67289.1| DNA directed RNA
polymerase II polypeptide K [Arabidopsis thaliana]
gi|332007242|gb|AED94625.1| DNA-directed RNA polymerase
NRPB12/NRPD12/NRPE12 [Arabidopsis thaliana]
Length = 51
Score = 79.3 bits (194), Expect = 5e-13
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = -2
Query: 300 MDPQPEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
MDP PEPV Y+CGDCGQENTLK GDVIQCRECGYRIL
Sbjct: 1 MDPAPEPVTYVCGDCGQENTLKSGDVIQCRECGYRIL 37
>ref|XP_006405406.1| hypothetical protein EUTSA_v10028022mg [Eutrema salsugineum]
gi|557106544|gb|ESQ46859.1| hypothetical protein
EUTSA_v10028022mg [Eutrema salsugineum]
Length = 51
Score = 79.0 bits (193), Expect = 6e-13
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = -2
Query: 300 MDPQPEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
MDP PEPV Y+CGDCGQENTLK GDVIQCRECGYRIL
Sbjct: 1 MDPLPEPVTYVCGDCGQENTLKSGDVIQCRECGYRIL 37
>ref|XP_002870659.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316495|gb|EFH46918.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 52
Score = 78.6 bits (192), Expect = 8e-13
Identities = 34/38 (89%), Positives = 36/38 (94%), Gaps = 1/38 (2%)
Frame = -2
Query: 300 MDP-QPEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
M+P QPEPV Y+CGDCGQENTLKPGDVIQCRECGYRIL
Sbjct: 1 MEPAQPEPVTYVCGDCGQENTLKPGDVIQCRECGYRIL 38
>ref|XP_004248221.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Solanum lycopersicum]
Length = 52
Score = 77.8 bits (190), Expect = 1e-12
Identities = 35/38 (92%), Positives = 36/38 (94%), Gaps = 1/38 (2%)
Frame = -2
Query: 300 MDPQP-EPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
MD QP EPV+YICGDCGQENTLKPGDVIQCRECGYRIL
Sbjct: 1 MDSQPVEPVSYICGDCGQENTLKPGDVIQCRECGYRIL 38
>gb|EEE62363.1| hypothetical protein OsJ_17152 [Oryza sativa Japonica Group]
Length = 50
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/38 (89%), Positives = 36/38 (94%), Gaps = 1/38 (2%)
Frame = -2
Query: 300 MDPQ-PEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
MDPQ PEPV+Y+CGDCG ENTLKPGDVIQCRECGYRIL
Sbjct: 1 MDPQQPEPVSYLCGDCGAENTLKPGDVIQCRECGYRIL 38
>gb|EEC78536.1| hypothetical protein OsI_18488 [Oryza sativa Indica Group]
Length = 87
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/38 (89%), Positives = 36/38 (94%), Gaps = 1/38 (2%)
Frame = -2
Query: 300 MDPQ-PEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
MDPQ PEPV+Y+CGDCG ENTLKPGDVIQCRECGYRIL
Sbjct: 1 MDPQQPEPVSYLCGDCGAENTLKPGDVIQCRECGYRIL 38
>ref|NP_001151371.1| LOC100285004 [Zea mays] gi|297720059|ref|NP_001172391.1|
Os01g0530366 [Oryza sativa Japonica Group]
gi|297723715|ref|NP_001174221.1| Os05g0151800 [Oryza
sativa Japonica Group] gi|242048352|ref|XP_002461922.1|
hypothetical protein SORBIDRAFT_02g010660 [Sorghum
bicolor] gi|242078439|ref|XP_002443988.1| hypothetical
protein SORBIDRAFT_07g005435 [Sorghum bicolor]
gi|514726952|ref|XP_004956106.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC4-like
[Setaria italica] gi|195609858|gb|ACG26759.1|
DNA-directed RNA polymerases I, II, and III 7.3 kDa
polypeptide [Zea mays] gi|195620974|gb|ACG32317.1|
DNA-directed RNA polymerases I, II, and III 7.3 kDa
polypeptide [Zea mays] gi|195645780|gb|ACG42358.1|
DNA-directed RNA polymerases I, II, and III 7.3 kDa
polypeptide [Zea mays] gi|195646246|gb|ACG42591.1|
DNA-directed RNA polymerases I, II, and III 7.3 kDa
polypeptide [Zea mays] gi|218188380|gb|EEC70807.1|
hypothetical protein OsI_02267 [Oryza sativa Indica
Group] gi|222618595|gb|EEE54727.1| hypothetical protein
OsJ_02072 [Oryza sativa Japonica Group]
gi|241925299|gb|EER98443.1| hypothetical protein
SORBIDRAFT_02g010660 [Sorghum bicolor]
gi|241940338|gb|EES13483.1| hypothetical protein
SORBIDRAFT_07g005435 [Sorghum bicolor]
gi|255673311|dbj|BAH91121.1| Os01g0530366 [Oryza sativa
Japonica Group] gi|255676033|dbj|BAH92949.1|
Os05g0151800 [Oryza sativa Japonica Group]
Length = 52
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/38 (89%), Positives = 36/38 (94%), Gaps = 1/38 (2%)
Frame = -2
Query: 300 MDPQ-PEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
MDPQ PEPV+Y+CGDCG ENTLKPGDVIQCRECGYRIL
Sbjct: 1 MDPQQPEPVSYLCGDCGAENTLKPGDVIQCRECGYRIL 38
>ref|XP_004972669.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Setaria italica]
Length = 52
Score = 77.0 bits (188), Expect = 2e-12
Identities = 33/38 (86%), Positives = 36/38 (94%), Gaps = 1/38 (2%)
Frame = -2
Query: 300 MDPQ-PEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
MDPQ PEPV+Y+CGDCG ENTLKPGDVIQCR+CGYRIL
Sbjct: 1 MDPQQPEPVSYLCGDCGSENTLKPGDVIQCRDCGYRIL 38
>ref|XP_004492394.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC4-like [Cicer arietinum]
Length = 51
Score = 75.5 bits (184), Expect = 7e-12
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = -2
Query: 300 MDPQPEPVNYICGDCGQENTLKPGDVIQCRECGYRIL 190
MDPQPEPV+Y+CGDCG ENT+K GDVI+CR+CGYRIL
Sbjct: 1 MDPQPEPVSYLCGDCGVENTIKSGDVIRCRDCGYRIL 37
>ref|XP_003595899.1| DNA-directed RNA polymerases I, II, and III subunit RPABC4
[Medicago truncatula] gi|355484947|gb|AES66150.1|
DNA-directed RNA polymerases I, II, and III subunit
RPABC4 [Medicago truncatula]
Length = 121
Score = 75.5 bits (184), Expect = 7e-12
Identities = 39/89 (43%), Positives = 45/89 (50%), Gaps = 18/89 (20%)
Frame = -2
Query: 300 MDPQPEPVNYICGDCGQENTLKPGDVIQCRECGYRIL-----------XXXXXXXXXXXX 154
MDP PEPV+Y+CGDCG ENTLK GDVIQCR+CGYRIL
Sbjct: 14 MDPLPEPVSYLCGDCGVENTLKSGDVIQCRDCGYRILYKKRTRRIVQYEARLLLKPDMDP 73
Query: 153 XPSAELFICGNC-------VSGVRYVCFC 88
P ++CG+C GV C C
Sbjct: 74 PPQPIRYLCGDCGAETPLYTDGVLQCCVC 102